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Conserved domains on  [gi|500998052|ref|WP_012051473|]
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MULTISPECIES: SlyX family protein [Pseudomonas]

Protein Classification

SlyX family protein( domain architecture ID 10011361)

SlyX family protein similar to Pseudomonas aeruginosa protein SlyX homolog

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK00295 PRK00295
hypothetical protein; Provisional
 1-68 2.45e-32

hypothetical protein; Provisional


:

Pssm-ID: 166895  Cd Length: 68  Bit Score: 106.01  E-value: 2.45e-32
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 500998052  1 MTLEMRMVELETRQAFQDDAIQALNDVVVEQARVIERLQLQMAELIKRHEEMVGQYGSEGEEAPPPHY 68
Cdd:PRK00295  1 MSLEERVTELESRQAFQDDTIQALNDVLVEQQRVIERLQLQMAALIKRQEEMVGQFGSFEEEAPPPHY 68
 
Name Accession Description Interval E-value
PRK00295 PRK00295
hypothetical protein; Provisional
 1-68 2.45e-32

hypothetical protein; Provisional


Pssm-ID: 166895  Cd Length: 68  Bit Score: 106.01  E-value: 2.45e-32
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 500998052  1 MTLEMRMVELETRQAFQDDAIQALNDVVVEQARVIERLQLQMAELIKRHEEMVGQYGSEGEEAPPPHY 68
Cdd:PRK00295  1 MSLEERVTELESRQAFQDDTIQALNDVLVEQQRVIERLQLQMAALIKRQEEMVGQFGSFEEEAPPPHY 68
SlyX COG2900
Uncharacterized coiled-coil protein SlyX (sensitive to lysis X) [Function unknown];
3-68 3.88e-18

Uncharacterized coiled-coil protein SlyX (sensitive to lysis X) [Function unknown];


Pssm-ID: 442145 [Multi-domain]  Cd Length: 67  Bit Score: 70.21  E-value: 3.88e-18
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 500998052  3 LEMRMVELETRQAFQDDAIQALNDVVVEQARVIERLQLQMAELIKRHEEM-VGQYGSEGEEAPPPHY 68
Cdd:COG2900   1 LEERLEELEIRLAFQEDTIEELNDVVARQQREIDRLQRQLRLLAERLKELePSLGASPAEEEPPPHY 67
SlyX pfam04102
SlyX; The SlyX protein has no known function. It is short less than 80 amino acids and is ...
 4-68 1.25e-17

SlyX; The SlyX protein has no known function. It is short less than 80 amino acids and is found close to the slyD gene. The SlyX protein has a conserved PPH(Y/W) motif at its C-terminus. The protein may be a coiled-coil structure.


Pssm-ID: 461173 [Multi-domain]  Cd Length: 66  Bit Score: 68.67  E-value: 1.25e-17
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 500998052   4 EMRMVELETRQAFQDDAIQALNDVVVEQARVIERLQLQMAELIKRHEEMVG-QYGSEGEEAPPPHY 68
Cdd:pfam04102  1 EERLEELEIKLAFQEDTIEELNDVVAEQQRQIDRLQRQLRLLAERLKELEPsLGADPAEEEPPPHY 66
 
Name Accession Description Interval E-value
PRK00295 PRK00295
hypothetical protein; Provisional
 1-68 2.45e-32

hypothetical protein; Provisional


Pssm-ID: 166895  Cd Length: 68  Bit Score: 106.01  E-value: 2.45e-32
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 500998052  1 MTLEMRMVELETRQAFQDDAIQALNDVVVEQARVIERLQLQMAELIKRHEEMVGQYGSEGEEAPPPHY 68
Cdd:PRK00295  1 MSLEERVTELESRQAFQDDTIQALNDVLVEQQRVIERLQLQMAALIKRQEEMVGQFGSFEEEAPPPHY 68
SlyX COG2900
Uncharacterized coiled-coil protein SlyX (sensitive to lysis X) [Function unknown];
3-68 3.88e-18

Uncharacterized coiled-coil protein SlyX (sensitive to lysis X) [Function unknown];


Pssm-ID: 442145 [Multi-domain]  Cd Length: 67  Bit Score: 70.21  E-value: 3.88e-18
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 500998052  3 LEMRMVELETRQAFQDDAIQALNDVVVEQARVIERLQLQMAELIKRHEEM-VGQYGSEGEEAPPPHY 68
Cdd:COG2900   1 LEERLEELEIRLAFQEDTIEELNDVVARQQREIDRLQRQLRLLAERLKELePSLGASPAEEEPPPHY 67
SlyX pfam04102
SlyX; The SlyX protein has no known function. It is short less than 80 amino acids and is ...
 4-68 1.25e-17

SlyX; The SlyX protein has no known function. It is short less than 80 amino acids and is found close to the slyD gene. The SlyX protein has a conserved PPH(Y/W) motif at its C-terminus. The protein may be a coiled-coil structure.


Pssm-ID: 461173 [Multi-domain]  Cd Length: 66  Bit Score: 68.67  E-value: 1.25e-17
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 500998052   4 EMRMVELETRQAFQDDAIQALNDVVVEQARVIERLQLQMAELIKRHEEMVG-QYGSEGEEAPPPHY 68
Cdd:pfam04102  1 EERLEELEIKLAFQEDTIEELNDVVAEQQRQIDRLQRQLRLLAERLKELEPsLGADPAEEEPPPHY 66
PRK02119 PRK02119
hypothetical protein; Provisional
 2-68 5.07e-10

hypothetical protein; Provisional


Pssm-ID: 235004  Cd Length: 73  Bit Score: 49.82  E-value: 5.07e-10
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 500998052  2 TLEMRMVELETRQAFQDDAIQALNDVVVEQARVIERLQLQMAELIKRHEEM-VGQYGSEGEEAPPPHY 68
Cdd:PRK02119  6 NLENRIAELEMKIAFQENLLEELNQALIEQQFVIDKMQVQLRYMANKLKDMqPSNIASQAEETPPPHY 73
PRK02793 PRK02793
phi X174 lysis protein; Provisional
 2-68 2.24e-08

phi X174 lysis protein; Provisional


Pssm-ID: 179472  Cd Length: 72  Bit Score: 45.67  E-value: 2.24e-08
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 500998052  2 TLEMRMVELETRQAFQDDAIQALNDVVVEQARVIERLQLQMAELIKR-HEEMVGQYGSEGEEAPPPHY 68
Cdd:PRK02793  5 SLEARLAELESRLAFQEITIEELNVTVTAHEMEMAKLRDHLRLLTEKlKASQPSNIASQAEETPPPHY 72
PRK04406 PRK04406
hypothetical protein; Provisional
 3-68 1.90e-07

hypothetical protein; Provisional


Pssm-ID: 235296  Cd Length: 75  Bit Score: 43.39  E-value: 1.90e-07
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 500998052  3 LEMRMVELETRQAFQDDAIQALNDVVVEQARVIERLQLQMAELIKRHEEMVG-QYGSEGEEAPPPHY 68
Cdd:PRK04406  9 LEERINDLECQLAFQEQTIEELNDALSQQQLLITKMQDQMKYVVGKVKNMDSsNLADPAEETPPPHY 75
PRK00846 PRK00846
hypothetical protein; Provisional
 3-68 1.97e-05

hypothetical protein; Provisional


Pssm-ID: 179141  Cd Length: 77  Bit Score: 38.32  E-value: 1.97e-05
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 500998052  3 LEMRMVELETRQAFQDDAI----QALNDVVVEQARVIERLQLQMAELIKRHEEMvgqYGSEGEEAPPPHY 68
Cdd:PRK00846 11 LEARLVELETRLSFQEQALtelsEALADARLTGARNAELIRHLLEDLGKVRSTL---FADPADEPPPPHY 77
PRK00736 PRK00736
hypothetical protein; Provisional
 1-68 1.60e-04

hypothetical protein; Provisional


Pssm-ID: 179103  Cd Length: 68  Bit Score: 35.58  E-value: 1.60e-04
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 500998052  1 MTLEMRMVELETRQAFQDDAIQALNDVVVEQARVIERLQLQMAELIKRHEEMVGQYGSEGEEAPPPHY 68
Cdd:PRK00736  1 MDAEERLTELEIRVAEQEKTIEELSDQLAEQWKTVEQMRKKLDALTERFLSLEEQAAPDVPVTKPPHW 68
PRK04325 PRK04325
hypothetical protein; Provisional
 3-68 2.65e-04

hypothetical protein; Provisional


Pssm-ID: 179824  Cd Length: 74  Bit Score: 35.26  E-value: 2.65e-04
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 500998052  3 LEMRMVELETRQAFQDDAIQALNDVVVEQARVIERLQLQMAELIK--RHEEMVGQYGSEGEEAPPPHY 68
Cdd:PRK04325  7 MEDRITELEIQLAFQEDLIDGLNATVARQQQTLDLLQAQLRLLYQqmRDANPDAAEPYSLRDEIPPHY 74
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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