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Conserved domains on  [gi|501041441|ref|WP_012093369|]
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DUF1236 domain-containing protein [Brucella anthropi]

Protein Classification

DUF1236 domain-containing protein( domain architecture ID 10536252)

DUF1236 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1236 pfam06823
Protein of unknown function (DUF1236); This family contains a number of hypothetical bacterial ...
 111-169 4.25e-14

Protein of unknown function (DUF1236); This family contains a number of hypothetical bacterial proteins of unknown function. Some family members contain more than one copy of the region represented by this family.


:

Pssm-ID: 429137  Cd Length: 64  Bit Score: 63.41  E-value: 4.25e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 501041441  111 YIETNPVDPVIIEGDIAEGMVIPEDVPLVAVPEQ---PTYSYVYVEDRPALIDTQTRRVVWV 169
Cdd:pfam06823   1 YVREQPVPPVTVEGEVSVGAVLPETVELYPVPDDigiPGYRYVVVNDRTVIVDPRTRRVVQI 62
DUF1236 pfam06823
Protein of unknown function (DUF1236); This family contains a number of hypothetical bacterial ...
 36-96 5.55e-14

Protein of unknown function (DUF1236); This family contains a number of hypothetical bacterial proteins of unknown function. Some family members contain more than one copy of the region represented by this family.


:

Pssm-ID: 429137  Cd Length: 64  Bit Score: 63.03  E-value: 5.55e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 501041441   36 YVIENPSDPVVIEGEISDGYVLPDAIAVHPIPDN---PGFGYIYVNGEPVILSMQNRQVVYYTE 96
Cdd:pfam06823   1 YVREQPVPPVTVEGEVSVGAVLPETVELYPVPDDigiPGYRYVVVNDRTVIVDPRTRRVVQIIE 64
 
Name Accession Description Interval E-value
DUF1236 pfam06823
Protein of unknown function (DUF1236); This family contains a number of hypothetical bacterial ...
 111-169 4.25e-14

Protein of unknown function (DUF1236); This family contains a number of hypothetical bacterial proteins of unknown function. Some family members contain more than one copy of the region represented by this family.


Pssm-ID: 429137  Cd Length: 64  Bit Score: 63.41  E-value: 4.25e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 501041441  111 YIETNPVDPVIIEGDIAEGMVIPEDVPLVAVPEQ---PTYSYVYVEDRPALIDTQTRRVVWV 169
Cdd:pfam06823   1 YVREQPVPPVTVEGEVSVGAVLPETVELYPVPDDigiPGYRYVVVNDRTVIVDPRTRRVVQI 62
DUF1236 pfam06823
Protein of unknown function (DUF1236); This family contains a number of hypothetical bacterial ...
 36-96 5.55e-14

Protein of unknown function (DUF1236); This family contains a number of hypothetical bacterial proteins of unknown function. Some family members contain more than one copy of the region represented by this family.


Pssm-ID: 429137  Cd Length: 64  Bit Score: 63.03  E-value: 5.55e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 501041441   36 YVIENPSDPVVIEGEISDGYVLPDAIAVHPIPDN---PGFGYIYVNGEPVILSMQNRQVVYYTE 96
Cdd:pfam06823   1 YVREQPVPPVTVEGEVSVGAVLPETVELYPVPDDigiPGYRYVVVNDRTVIVDPRTRRVVQIIE 64
 
Name Accession Description Interval E-value
DUF1236 pfam06823
Protein of unknown function (DUF1236); This family contains a number of hypothetical bacterial ...
 111-169 4.25e-14

Protein of unknown function (DUF1236); This family contains a number of hypothetical bacterial proteins of unknown function. Some family members contain more than one copy of the region represented by this family.


Pssm-ID: 429137  Cd Length: 64  Bit Score: 63.41  E-value: 4.25e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 501041441  111 YIETNPVDPVIIEGDIAEGMVIPEDVPLVAVPEQ---PTYSYVYVEDRPALIDTQTRRVVWV 169
Cdd:pfam06823   1 YVREQPVPPVTVEGEVSVGAVLPETVELYPVPDDigiPGYRYVVVNDRTVIVDPRTRRVVQI 62
DUF1236 pfam06823
Protein of unknown function (DUF1236); This family contains a number of hypothetical bacterial ...
 36-96 5.55e-14

Protein of unknown function (DUF1236); This family contains a number of hypothetical bacterial proteins of unknown function. Some family members contain more than one copy of the region represented by this family.


Pssm-ID: 429137  Cd Length: 64  Bit Score: 63.03  E-value: 5.55e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 501041441   36 YVIENPSDPVVIEGEISDGYVLPDAIAVHPIPDN---PGFGYIYVNGEPVILSMQNRQVVYYTE 96
Cdd:pfam06823   1 YVREQPVPPVTVEGEVSVGAVLPETVELYPVPDDigiPGYRYVVVNDRTVIVDPRTRRVVQIIE 64
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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