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Conserved domains on  [gi|501229669|ref|WP_012272687|]
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MULTISPECIES: DUF2282 domain-containing protein [Pseudomonas]

Protein Classification

DUF2282 domain-containing protein( domain architecture ID 10009447)

DUF2282 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG5572 COG5572
Uncharacterized membrane protein [Function unknown];
26-95 2.41e-24

Uncharacterized membrane protein [Function unknown];


:

Pssm-ID: 444314  Cd Length: 89  Bit Score: 87.66  E-value: 2.41e-24
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 501229669 26 ANTTSAGAAMEKCYGVAMAGKNDCKAGAGT-TCAGSAKKDYDGMHWKNVPAGTCTSIktpsgMGSLTPIKS 95
Cdd:COG5572  24 AAAAAAAAGKEKCYGVAKAGKNDCAAGAGThSCAGTSTVDYQGNAWKYVPKGTCEKI-----GGSLTPAKR 89
 
Name Accession Description Interval E-value
COG5572 COG5572
Uncharacterized membrane protein [Function unknown];
26-95 2.41e-24

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444314  Cd Length: 89  Bit Score: 87.66  E-value: 2.41e-24
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 501229669 26 ANTTSAGAAMEKCYGVAMAGKNDCKAGAGT-TCAGSAKKDYDGMHWKNVPAGTCTSIktpsgMGSLTPIKS 95
Cdd:COG5572  24 AAAAAAAAGKEKCYGVAKAGKNDCAAGAGThSCAGTSTVDYQGNAWKYVPKGTCEKI-----GGSLTPAKR 89
DUF2282 pfam10048
Predicted integral membrane protein (DUF2282); Members of this family of hypothetical ...
 35-85 1.50e-21

Predicted integral membrane protein (DUF2282); Members of this family of hypothetical bacterial proteins and putative signal peptide proteins have no known function.


Pssm-ID: 431015  Cd Length: 52  Bit Score: 79.62  E-value: 1.50e-21
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 501229669  35 MEKCYGVAMAGKNDCKAGAGTTCAGSAKKDYDGMHWKNVPAGTCTSIKTPS 85
Cdd:pfam10048  1 KEKCYGVAKAGQNDCAAGAGTSCAGQSKVDYDGNAWKLVPKGTCEKIVGGS 51
 
Name Accession Description Interval E-value
COG5572 COG5572
Uncharacterized membrane protein [Function unknown];
26-95 2.41e-24

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444314  Cd Length: 89  Bit Score: 87.66  E-value: 2.41e-24
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 501229669 26 ANTTSAGAAMEKCYGVAMAGKNDCKAGAGT-TCAGSAKKDYDGMHWKNVPAGTCTSIktpsgMGSLTPIKS 95
Cdd:COG5572  24 AAAAAAAAGKEKCYGVAKAGKNDCAAGAGThSCAGTSTVDYQGNAWKYVPKGTCEKI-----GGSLTPAKR 89
DUF2282 pfam10048
Predicted integral membrane protein (DUF2282); Members of this family of hypothetical ...
 35-85 1.50e-21

Predicted integral membrane protein (DUF2282); Members of this family of hypothetical bacterial proteins and putative signal peptide proteins have no known function.


Pssm-ID: 431015  Cd Length: 52  Bit Score: 79.62  E-value: 1.50e-21
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 501229669  35 MEKCYGVAMAGKNDCKAGAGTTCAGSAKKDYDGMHWKNVPAGTCTSIKTPS 85
Cdd:pfam10048  1 KEKCYGVAKAGQNDCAAGAGTSCAGQSKVDYDGNAWKLVPKGTCEKIVGGS 51
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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