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Full Results
glycine--tRNA ligase subunit beta [Xanthomonas campestris]
Protein Classification
glycine--tRNA ligase subunit beta ( domain architecture ID 11433536 )
glycine--tRNA ligase subunit beta is part of a class-II aminoacyl-tRNA synthetase that catalyzes the conversion from ATP, glycine, and tRNA(Gly) to AMP, diphosphate, and glycyl-tRNA(Gly)
List of domain hits
Name
Accession
Description
Interval
E-value
GlyS
COG0751 Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis]; ...
6-698
0e+00
Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis]; Glycyl-tRNA synthetase, beta subunit is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 440514 [Multi-domain]
Cd Length: 690
Bit Score: 908.70
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 6 P LL I E L GTEELP V K A LP G L AQAFFDGVL AGL EKRGVAV tr G DAKPLS TPRRLAVL LP G V A TE QP EQRS EV L GP YLNI A L D 85
Cdd:COG0751 4 D LL L E I GTEELP A K F LP K L LEQLAELLA AGL KEARLSF -- G EVEVYA TPRRLAVL VE G L A EK QP DREE EV K GP PVKA A F D 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 86 A E G K PT R A LA GFA AKA G I D WTA LER TSDA KGE RFVH R AVTP G AQA A A LLPEIL R EAIA AM P I PK P MRWG AHEYA F A RPV Q 165
Cdd:COG0751 82 A D G N PT K A AL GFA RSQ G V D VDD LER RETD KGE YLFA R KTIK G RPT A E LLPEIL P EAIA KL P F PK S MRWG DGDVR F V RPV R 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 166 WLV L L F GD T V I P A E L LG VRGD R I TRGHRF MHD G D I AL A APG DY IDA LR AAH V LV D ADA RR AR I V E EVD AAA RQA GG S A R I 245
Cdd:COG0751 162 WLV A L L GD E V V P F E I LG LKSG R T TRGHRF LGP G P I EI A SAD DY EET LR EGY V IA D FEE RR EL I R E QLE AAA AEL GG T A D I 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 246 SD D N L EQ V V NLVEWP S A V L C SF ERA FL AV PQE A LI E TM EIN Q KF FPVLD DG GKL TEQ FI GIA N IV SKD VAE V AK G Y ERV I 325
Cdd:COG0751 242 DE D L L DE V T NLVEWP T A L L G SF DEE FL EL PQE V LI T TM KEH Q RY FPVLD AD GKL LPY FI TVS N GE SKD PEN V IA G N ERV L 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 326 R P R F ADAKFF FD EDLK QG LE AMGAG L AS V TY Q A KLGT V ADKV A R VA ALA E AIA P Q V G A D PV -- Q A R RAA E LAK N DL QSR M 403
Cdd:COG0751 322 R A R L ADAKFF YE EDLK KP LE DRVEK L KK V VF Q E KLGT L ADKV E R IE ALA A AIA E Q L G L D EE aa L A E RAA L LAK A DL VTQ M 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 404 V N EFPELQGI A GR H YA KAA GEP S E IS LAI D E A Y Q PRFAGD DIALSPL G KVL A I A ER LDTL A G G F AA GL K PTG N KDPFALR 483
Cdd:COG0751 402 V G EFPELQGI M GR Y YA LHD GEP E E VA LAI E E H Y L PRFAGD ALPSTLV G AIV A L A DK LDTL V G I F GI GL I PTG S KDPFALR 481
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 484 R N ALG LA R TV IE S G FD LDL PK L I D VG LA SLPDAVKP hadrnt E T V RADLY DF I L D RL KGYYADK G VAATHFN AV AE L T P A 563
Cdd:COG0751 482 R A ALG IL R IL IE K G LP LDL SE L L D AA LA LYGEQLDA ------ E E V VEEVL DF F L E RL RNLLQEE G ISYDVVD AV LA L G P D 555
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 564 SLY D F D R R ID A IGI F AT LPE A EALAAANKR IR NIL R K V EGE IPGDI D TT LL R EPAE E AL A EA V E AAIGDTGDA L HRH DY V 643
Cdd:COG0751 556 DPL D A D A R AK A LAA F RA LPE F EALAAANKR VA NIL K K A EGE VSAEV D PA LL E EPAE K AL Y EA L E ELEPEVEAL L AAG DY E 635
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 501408060 644 AV LA R LA R LRP Q VDAFFD G VMV N A D D PQ LRANRLALL KK L GDRLGS VA A I EH L SS 698
Cdd:COG0751 636 EA LA A LA A LRP P VDAFFD N VMV M A E D EA LRANRLALL AR L RALFLR VA D I SK L VK 690
Name
Accession
Description
Interval
E-value
GlyS
COG0751 Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis]; ...
6-698
0e+00
Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis]; Glycyl-tRNA synthetase, beta subunit is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 440514 [Multi-domain]
Cd Length: 690
Bit Score: 908.70
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 6 P LL I E L GTEELP V K A LP G L AQAFFDGVL AGL EKRGVAV tr G DAKPLS TPRRLAVL LP G V A TE QP EQRS EV L GP YLNI A L D 85
Cdd:COG0751 4 D LL L E I GTEELP A K F LP K L LEQLAELLA AGL KEARLSF -- G EVEVYA TPRRLAVL VE G L A EK QP DREE EV K GP PVKA A F D 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 86 A E G K PT R A LA GFA AKA G I D WTA LER TSDA KGE RFVH R AVTP G AQA A A LLPEIL R EAIA AM P I PK P MRWG AHEYA F A RPV Q 165
Cdd:COG0751 82 A D G N PT K A AL GFA RSQ G V D VDD LER RETD KGE YLFA R KTIK G RPT A E LLPEIL P EAIA KL P F PK S MRWG DGDVR F V RPV R 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 166 WLV L L F GD T V I P A E L LG VRGD R I TRGHRF MHD G D I AL A APG DY IDA LR AAH V LV D ADA RR AR I V E EVD AAA RQA GG S A R I 245
Cdd:COG0751 162 WLV A L L GD E V V P F E I LG LKSG R T TRGHRF LGP G P I EI A SAD DY EET LR EGY V IA D FEE RR EL I R E QLE AAA AEL GG T A D I 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 246 SD D N L EQ V V NLVEWP S A V L C SF ERA FL AV PQE A LI E TM EIN Q KF FPVLD DG GKL TEQ FI GIA N IV SKD VAE V AK G Y ERV I 325
Cdd:COG0751 242 DE D L L DE V T NLVEWP T A L L G SF DEE FL EL PQE V LI T TM KEH Q RY FPVLD AD GKL LPY FI TVS N GE SKD PEN V IA G N ERV L 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 326 R P R F ADAKFF FD EDLK QG LE AMGAG L AS V TY Q A KLGT V ADKV A R VA ALA E AIA P Q V G A D PV -- Q A R RAA E LAK N DL QSR M 403
Cdd:COG0751 322 R A R L ADAKFF YE EDLK KP LE DRVEK L KK V VF Q E KLGT L ADKV E R IE ALA A AIA E Q L G L D EE aa L A E RAA L LAK A DL VTQ M 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 404 V N EFPELQGI A GR H YA KAA GEP S E IS LAI D E A Y Q PRFAGD DIALSPL G KVL A I A ER LDTL A G G F AA GL K PTG N KDPFALR 483
Cdd:COG0751 402 V G EFPELQGI M GR Y YA LHD GEP E E VA LAI E E H Y L PRFAGD ALPSTLV G AIV A L A DK LDTL V G I F GI GL I PTG S KDPFALR 481
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 484 R N ALG LA R TV IE S G FD LDL PK L I D VG LA SLPDAVKP hadrnt E T V RADLY DF I L D RL KGYYADK G VAATHFN AV AE L T P A 563
Cdd:COG0751 482 R A ALG IL R IL IE K G LP LDL SE L L D AA LA LYGEQLDA ------ E E V VEEVL DF F L E RL RNLLQEE G ISYDVVD AV LA L G P D 555
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 564 SLY D F D R R ID A IGI F AT LPE A EALAAANKR IR NIL R K V EGE IPGDI D TT LL R EPAE E AL A EA V E AAIGDTGDA L HRH DY V 643
Cdd:COG0751 556 DPL D A D A R AK A LAA F RA LPE F EALAAANKR VA NIL K K A EGE VSAEV D PA LL E EPAE K AL Y EA L E ELEPEVEAL L AAG DY E 635
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 501408060 644 AV LA R LA R LRP Q VDAFFD G VMV N A D D PQ LRANRLALL KK L GDRLGS VA A I EH L SS 698
Cdd:COG0751 636 EA LA A LA A LRP P VDAFFD N VMV M A E D EA LRANRLALL AR L RALFLR VA D I SK L VK 690
tRNA_synt_2f
pfam02092 Glycyl-tRNA synthetase beta subunit;
7-557
0e+00
Glycyl-tRNA synthetase beta subunit;
Pssm-ID: 460442
Cd Length: 536
Bit Score: 730.74
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 7 LL I E L GTEELP VKA LP GLAQAFFDGVLAG L EKRGVAV tr G DA K PLS TPRRLAVL LP G V A TE QP EQRS EV L GP YLNI A L DA 86
Cdd:pfam02092 1 LL L E I GTEELP ARF LP KALEQLAELITKL L KEARLSY -- G EV K VFA TPRRLAVL VE G L A EK QP DREE EV K GP PVKA A F DA 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 87 E G K PT R A LA GFA AKA G IDWTA LE RTSD a KGE RFVH R AVT PG AQA A A LLPEIL R EAIA AM P I PK P MRWG AHEYA F A RP VQ W 166
Cdd:pfam02092 79 D G N PT K A AE GFA RSQ G VSVED LE IREK - KGE YLFA R KTE PG RPT A E LLPEIL P EAIA SL P F PK S MRWG DGDLR F V RP IR W 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 167 LV L L F GD T V I P A E L LG VRGD R I TRGHRF MHD G D I AL A APG DY IDA LR A A H V LV D ADA RR AR I V E EVD A A A RQ AGG SAR I S 246
Cdd:pfam02092 158 LV A L L GD E V V P F E I LG IKSG R T TRGHRF LGP G P I EI A SAD DY EEK LR E A F V IA D PEE RR EI I L E QIE A L A AE AGG TVD I D 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 247 D D N L EQ V V NLVE W P S A V L C SF ERA FL AV P Q E A LI ET M EIN Q KF FPV L D DG GKL TEQ FI GIA N IVSK D VAE V AK G Y ERV I R 326
Cdd:pfam02092 238 E D L L DE V T NLVE Y P T A L L G SF DEE FL EL P E E V LI TS M KEH Q RY FPV R D AD GKL LPY FI TVS N GDPD D PEN V IA G N ERV L R 317
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 327 P R F ADAKFF FD EDLK QG LE AMGAG L AS V TY Q A KLGT V ADKV A R VA ALA EAI A P Q V G adpv Q A R RAA E LAK N DL QSR MV N E 406
Cdd:pfam02092 318 A R L ADAKFF YE EDLK KP LE SRVEK L KK V VF Q E KLGT L ADKV E R IE ALA AYL A E Q L G ---- D A E RAA L LAK A DL VTE MV G E 393
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 407 FPELQGI A GR H YA K A A GE PS E IS LAI D E A Y Q PRFAGD DIALSPL G K V L A I A ER LDTL A G G F AA GL K PTG N KDPFALRR N A 486
Cdd:pfam02092 394 FPELQGI M GR Y YA L A D GE DE E VA LAI E E H Y L PRFAGD ALPSTLV G A V V A L A DK LDTL V G I F GI GL I PTG S KDPFALRR A A 473
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 501408060 487 LG LA R TVI E S G F DLDL PK L IDVG L ASLP D avkphadrnt E T V R ADL YD F I LDRLK GYYADK G VAATHFN AV 557
Cdd:pfam02092 474 LG II R ILL E K G L DLDL RE L LEKA L ELYG D ---------- E E V L ADL LE F F LDRLK NLLREE G IRYDVVD AV 534
glyS
TIGR00211 glycyl-tRNA synthetase, tetrameric type, beta subunit; The glycyl-tRNA synthetases differ even ...
1-696
0e+00
glycyl-tRNA synthetase, tetrameric type, beta subunit; The glycyl-tRNA synthetases differ even among the eubacteria in oligomeric structure. In Escherichia coli and most others, it is a heterodimer of two alpha chains and two beta chains, encoded by tandem genes. The genes are similar, but fused, in Chlamydia trachomatis. By contrast, the glycyl-tRNA synthetases of Thermus thermophilus and of archaea and eukaryotes differ considerably; they are homodimeric, mutually similar, and not detected by this model. [Protein synthesis, tRNA aminoacylation]
Pssm-ID: 272962 [Multi-domain]
Cd Length: 691
Bit Score: 604.49
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 1 MS E Q l PL L I E L GTEELP V KAL PG LA QA F F D GVL A G L E K R G VAV tr G DAKPLS TPRRLAVL LPGV A TE QP EQRS E VL GP YL 80
Cdd:TIGR00211 1 MS S Q - TF L V E I GTEELP A KAL RS LA TQ F A D KLT A E L N K A G LEH -- G NVEIFA TPRRLAVL VKDL A EL QP DRKE E KK GP AV 77
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 81 N IA L DA E GKPT R A LA GFA AKA GI DWTAL E RTSDA KGE RFVH R AVTP G AQAAA LLP EILR E AI A AM P I PK P MRWG AHEYA F 160
Cdd:TIGR00211 78 K IA F DA D GKPT K A AL GFA KGQ GI NVEDA E IFQTD KGE WLFV R KIHE G QPTKD LLP PLVL E FL A KL P F PK S MRWG NVDVR F 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 161 A RP VQ W L V L L F GD T VIP A E L L G V RG DR I TRGHRF MHDGDIALAA P GD Y IDA L RAA HV LV D ADA R R A R I VEEVDAA A RQA G 240
Cdd:TIGR00211 158 I RP IH W I V V L L GD D VIP I E I L N V KS DR T TRGHRF LGEDEVSIES P DA Y PEQ L KEN HV IA D PKE R K A M I LQQIETL A AKL G 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 241 G S A R I SD D N L EQ VV N LVE W P S A V L CS FE RA FL AV P Q E A L IE TM EIN Q KF FPV L D DG GKL TEQ FI GIA N IV SKD VAEVAK G 320
Cdd:TIGR00211 238 G I A D I DE D L L DE VV S LVE Y P T A L L GK FE EE FL SL P A E V L VT TM KEH Q RY FPV Y D KD GKL LPH FI TVS N GN SKD PQKIIL G 317
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 321 Y E R V I R P R FA DA K FF FDE DLK QG L EAMGAG L AS V TY Q AK LGT VA DKV A R VAAL A EA IA P Q V GAD PVQ --- AR RAA E L A K N 397
Cdd:TIGR00211 318 N E K V L R A R LS DA E FF YKT DLK KP L DDNLPR L ET V VF Q QE LGT LK DKV D R ISII A GY IA Q Q L GAD ENM leh VK RAA L L S K A 397
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 398 DL QSR MV N EFPELQGI A G RH YA KAA GE PSEISL A ID E A Y Q PR F AGDD IAL S PL G K V L A I A ER LDTLA GG F AA G LK PTG N K 477
Cdd:TIGR00211 398 DL VTN MV Y EFPELQGI M G EK YA RHD GE DEAVAV A VN E Q Y L PR S AGDD LPS S LV G S V V A M A DK LDTLA SI F GI G QI PTG S K 477
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 478 DPFALRR N ALG LA R TVI E SGFDL DL PK L IDVGLASLP D AVKP hadrnt ET V RA DL Y DF I L D R LKGYYA D K G VAATHFN AV 557
Cdd:TIGR00211 478 DPFALRR A ALG VL R IIV E KNLEI DL EE L LTNFVLLQG D KLTN ------ SN V LE DL E DF F L Q R FRALLQ D E G IDVDVIQ AV 551
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 558 AELTPASLY DFD R R ID A IGI F AT LP E AEALAAANKR IR NIL R K VEGEIPGD I DTT L LR EP A E E AL A EAV E A AIGDTGDAL 637
Cdd:TIGR00211 552 LARRETDPA DFD A R AQ A LSH F RD LP K AEALAAANKR VA NIL K K GNPVLSSE I QAN L FK EP K E K AL F EAV L A IKMNAQESF 631
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*....
gi 501408060 638 HRH DY VAV L AR LA R LR PQ VD A FFD G VMV N ADD PQ LR A NRL AL L KK L GDRLGS VA A I EH L 696
Cdd:TIGR00211 632 ESG DY ETA L EA LA E LR AP VD E FFD S VMV M ADD IE LR Q NRL NF L WG L RQLFLE VA D I SA L 690
PRK14908
PRK14908 glycine--tRNA ligase;
7-696
9.96e-166
glycine--tRNA ligase;
Pssm-ID: 237859 [Multi-domain]
Cd Length: 1000
Bit Score: 502.24
E-value: 9.96e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 7 LL I E L G T EELP VKAL P GLA Q AFFDGVLAG L EKRGVAV tr GDAKP L S TPRRLA V L LPG VA TEQ P EQRS E VL GP Y L NI A L DA 86
Cdd:PRK14908 314 LL F E I G S EELP ATFV P IGI Q QLESALREL L ADTRLGY -- EKLEV L G TPRRLA L L VED VA PRE P DAER E KR GP R L SA A F DA 391
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 87 E G K PT R A LA GF AAKA G I D --- WT AL ERTSDAKGER ------- F VH R AV t PG AQ AAA L L PEI L R E A I AAMPI PK P MRW GAH 156
Cdd:PRK14908 392 D G T PT P A GE GF FRSQ G V D ish LS AL DQDGAIEIRE ingveyl F LV R PE - PG RD AAA I L ANE L P E L I QSLRF PK K MRW DDP 470
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 157 EYAF ARP VQ WLV L L F GD TVI P AELLGVRGD R I TRGHR FMHDGDIALAAPGD Y IDA LR A A H V LVDADA RR AR IV EEVDAA A 236
Cdd:PRK14908 471 GLSY ARP IR WLV A L Y GD QIV P ISVGTLASG R T TRGHR QLDPPPVEIPSADG Y VET LR Q A C V ILSPKE RR EI IV QGLQNL A 550
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 237 RQAGGS A RISDDNLEQ V V NLVE W P SAV L CS F ERA FL AV P Q E A LI ET M EIN Q KF FPV L D DG G K L TEQ F IGI A NIVSK D va E 316
Cdd:PRK14908 551 ADVQID A IAEPRLIDE V T NLVE H P FVI L GQ F DEK FL EL P K E L LI AE M VKH Q RY FPV R D AQ G T L LNH F VIV A DGSPD D -- E 628
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 317 VAK G Y E R V I R P R FA D AK F F F DE DLK QG LE AMGAG L A SVTY QAK LG TV ADKV A R VA A L AE AI A PQVG - ADPVQAR RAAEL A 395
Cdd:PRK14908 629 IVR G N E K V L R A R LT D GA F L F KA DLK TP LE TFVEK L K SVTY FEA LG SL ADKV E R IK A H AE EL A ALLP l SARETLD RAAEL C 708
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 396 K N DL Q S R MVNEFPELQGI A GR H YA KA AGEP SEISL A ID E AYQ PR F AGD DIAL S PL G KV L AI A E RLD T L A G G FA A GLKPT G 475
Cdd:PRK14908 709 K F DL V S Q MVNEFPELQGI M GR Y YA QR AGEP EAVAQ A LG E HEL PR T AGD SLPA S TT G AL L SL A D RLD N L L G C FA L GLKPT S 788
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 476 NK DP F ALRR N ALG LARTVIESGFD LDL PK L idvg LA S L PDAVKPHADRNT E T V RADLYD F ILD RLK GYYA D K G VAATHFN 555
Cdd:PRK14908 789 SS DP Y ALRR Q ALG VLTLLRATPAS LDL ED L ---- LA R L ARHFPSTTVWVK E A V LDEVLE F VWG RLK TQLL D L G FDKDEIA 864
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 556 AV AELTPASLYDF D RRID A IGIFATLPEAEAL AAA NK R IRN IL rkv EGEIPGDI D TT LL R EPAE EA L AE A VE A AIGDTGD 635
Cdd:PRK14908 865 AV LPDACKNPAEA D KTAQ A LQELKSTEIFAEI AAA LN R LKR IL --- ASLSFSVT D AS LL L EPAE LN L KQ A LD A FREELTE 941
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 501408060 636 al HRH D YVAVL A RL A R L RPQ V DA FFD G V M V N ADD PQL R AN RL A LL KKLG D RLGS V AAIEH L 696
Cdd:PRK14908 942 -- LPI D LKDYV A AA A E L PQA V NT FFD E V L V M ADD EAI R NA RL G LL AAIR D LKFG V LDWDA L 1000
Name
Accession
Description
Interval
E-value
GlyS
COG0751 Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis]; ...
6-698
0e+00
Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis]; Glycyl-tRNA synthetase, beta subunit is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 440514 [Multi-domain]
Cd Length: 690
Bit Score: 908.70
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 6 P LL I E L GTEELP V K A LP G L AQAFFDGVL AGL EKRGVAV tr G DAKPLS TPRRLAVL LP G V A TE QP EQRS EV L GP YLNI A L D 85
Cdd:COG0751 4 D LL L E I GTEELP A K F LP K L LEQLAELLA AGL KEARLSF -- G EVEVYA TPRRLAVL VE G L A EK QP DREE EV K GP PVKA A F D 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 86 A E G K PT R A LA GFA AKA G I D WTA LER TSDA KGE RFVH R AVTP G AQA A A LLPEIL R EAIA AM P I PK P MRWG AHEYA F A RPV Q 165
Cdd:COG0751 82 A D G N PT K A AL GFA RSQ G V D VDD LER RETD KGE YLFA R KTIK G RPT A E LLPEIL P EAIA KL P F PK S MRWG DGDVR F V RPV R 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 166 WLV L L F GD T V I P A E L LG VRGD R I TRGHRF MHD G D I AL A APG DY IDA LR AAH V LV D ADA RR AR I V E EVD AAA RQA GG S A R I 245
Cdd:COG0751 162 WLV A L L GD E V V P F E I LG LKSG R T TRGHRF LGP G P I EI A SAD DY EET LR EGY V IA D FEE RR EL I R E QLE AAA AEL GG T A D I 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 246 SD D N L EQ V V NLVEWP S A V L C SF ERA FL AV PQE A LI E TM EIN Q KF FPVLD DG GKL TEQ FI GIA N IV SKD VAE V AK G Y ERV I 325
Cdd:COG0751 242 DE D L L DE V T NLVEWP T A L L G SF DEE FL EL PQE V LI T TM KEH Q RY FPVLD AD GKL LPY FI TVS N GE SKD PEN V IA G N ERV L 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 326 R P R F ADAKFF FD EDLK QG LE AMGAG L AS V TY Q A KLGT V ADKV A R VA ALA E AIA P Q V G A D PV -- Q A R RAA E LAK N DL QSR M 403
Cdd:COG0751 322 R A R L ADAKFF YE EDLK KP LE DRVEK L KK V VF Q E KLGT L ADKV E R IE ALA A AIA E Q L G L D EE aa L A E RAA L LAK A DL VTQ M 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 404 V N EFPELQGI A GR H YA KAA GEP S E IS LAI D E A Y Q PRFAGD DIALSPL G KVL A I A ER LDTL A G G F AA GL K PTG N KDPFALR 483
Cdd:COG0751 402 V G EFPELQGI M GR Y YA LHD GEP E E VA LAI E E H Y L PRFAGD ALPSTLV G AIV A L A DK LDTL V G I F GI GL I PTG S KDPFALR 481
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 484 R N ALG LA R TV IE S G FD LDL PK L I D VG LA SLPDAVKP hadrnt E T V RADLY DF I L D RL KGYYADK G VAATHFN AV AE L T P A 563
Cdd:COG0751 482 R A ALG IL R IL IE K G LP LDL SE L L D AA LA LYGEQLDA ------ E E V VEEVL DF F L E RL RNLLQEE G ISYDVVD AV LA L G P D 555
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 564 SLY D F D R R ID A IGI F AT LPE A EALAAANKR IR NIL R K V EGE IPGDI D TT LL R EPAE E AL A EA V E AAIGDTGDA L HRH DY V 643
Cdd:COG0751 556 DPL D A D A R AK A LAA F RA LPE F EALAAANKR VA NIL K K A EGE VSAEV D PA LL E EPAE K AL Y EA L E ELEPEVEAL L AAG DY E 635
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 501408060 644 AV LA R LA R LRP Q VDAFFD G VMV N A D D PQ LRANRLALL KK L GDRLGS VA A I EH L SS 698
Cdd:COG0751 636 EA LA A LA A LRP P VDAFFD N VMV M A E D EA LRANRLALL AR L RALFLR VA D I SK L VK 690
tRNA_synt_2f
pfam02092 Glycyl-tRNA synthetase beta subunit;
7-557
0e+00
Glycyl-tRNA synthetase beta subunit;
Pssm-ID: 460442
Cd Length: 536
Bit Score: 730.74
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 7 LL I E L GTEELP VKA LP GLAQAFFDGVLAG L EKRGVAV tr G DA K PLS TPRRLAVL LP G V A TE QP EQRS EV L GP YLNI A L DA 86
Cdd:pfam02092 1 LL L E I GTEELP ARF LP KALEQLAELITKL L KEARLSY -- G EV K VFA TPRRLAVL VE G L A EK QP DREE EV K GP PVKA A F DA 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 87 E G K PT R A LA GFA AKA G IDWTA LE RTSD a KGE RFVH R AVT PG AQA A A LLPEIL R EAIA AM P I PK P MRWG AHEYA F A RP VQ W 166
Cdd:pfam02092 79 D G N PT K A AE GFA RSQ G VSVED LE IREK - KGE YLFA R KTE PG RPT A E LLPEIL P EAIA SL P F PK S MRWG DGDLR F V RP IR W 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 167 LV L L F GD T V I P A E L LG VRGD R I TRGHRF MHD G D I AL A APG DY IDA LR A A H V LV D ADA RR AR I V E EVD A A A RQ AGG SAR I S 246
Cdd:pfam02092 158 LV A L L GD E V V P F E I LG IKSG R T TRGHRF LGP G P I EI A SAD DY EEK LR E A F V IA D PEE RR EI I L E QIE A L A AE AGG TVD I D 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 247 D D N L EQ V V NLVE W P S A V L C SF ERA FL AV P Q E A LI ET M EIN Q KF FPV L D DG GKL TEQ FI GIA N IVSK D VAE V AK G Y ERV I R 326
Cdd:pfam02092 238 E D L L DE V T NLVE Y P T A L L G SF DEE FL EL P E E V LI TS M KEH Q RY FPV R D AD GKL LPY FI TVS N GDPD D PEN V IA G N ERV L R 317
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 327 P R F ADAKFF FD EDLK QG LE AMGAG L AS V TY Q A KLGT V ADKV A R VA ALA EAI A P Q V G adpv Q A R RAA E LAK N DL QSR MV N E 406
Cdd:pfam02092 318 A R L ADAKFF YE EDLK KP LE SRVEK L KK V VF Q E KLGT L ADKV E R IE ALA AYL A E Q L G ---- D A E RAA L LAK A DL VTE MV G E 393
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 407 FPELQGI A GR H YA K A A GE PS E IS LAI D E A Y Q PRFAGD DIALSPL G K V L A I A ER LDTL A G G F AA GL K PTG N KDPFALRR N A 486
Cdd:pfam02092 394 FPELQGI M GR Y YA L A D GE DE E VA LAI E E H Y L PRFAGD ALPSTLV G A V V A L A DK LDTL V G I F GI GL I PTG S KDPFALRR A A 473
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 501408060 487 LG LA R TVI E S G F DLDL PK L IDVG L ASLP D avkphadrnt E T V R ADL YD F I LDRLK GYYADK G VAATHFN AV 557
Cdd:pfam02092 474 LG II R ILL E K G L DLDL RE L LEKA L ELYG D ---------- E E V L ADL LE F F LDRLK NLLREE G IRYDVVD AV 534
glyS
TIGR00211 glycyl-tRNA synthetase, tetrameric type, beta subunit; The glycyl-tRNA synthetases differ even ...
1-696
0e+00
glycyl-tRNA synthetase, tetrameric type, beta subunit; The glycyl-tRNA synthetases differ even among the eubacteria in oligomeric structure. In Escherichia coli and most others, it is a heterodimer of two alpha chains and two beta chains, encoded by tandem genes. The genes are similar, but fused, in Chlamydia trachomatis. By contrast, the glycyl-tRNA synthetases of Thermus thermophilus and of archaea and eukaryotes differ considerably; they are homodimeric, mutually similar, and not detected by this model. [Protein synthesis, tRNA aminoacylation]
Pssm-ID: 272962 [Multi-domain]
Cd Length: 691
Bit Score: 604.49
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 1 MS E Q l PL L I E L GTEELP V KAL PG LA QA F F D GVL A G L E K R G VAV tr G DAKPLS TPRRLAVL LPGV A TE QP EQRS E VL GP YL 80
Cdd:TIGR00211 1 MS S Q - TF L V E I GTEELP A KAL RS LA TQ F A D KLT A E L N K A G LEH -- G NVEIFA TPRRLAVL VKDL A EL QP DRKE E KK GP AV 77
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 81 N IA L DA E GKPT R A LA GFA AKA GI DWTAL E RTSDA KGE RFVH R AVTP G AQAAA LLP EILR E AI A AM P I PK P MRWG AHEYA F 160
Cdd:TIGR00211 78 K IA F DA D GKPT K A AL GFA KGQ GI NVEDA E IFQTD KGE WLFV R KIHE G QPTKD LLP PLVL E FL A KL P F PK S MRWG NVDVR F 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 161 A RP VQ W L V L L F GD T VIP A E L L G V RG DR I TRGHRF MHDGDIALAA P GD Y IDA L RAA HV LV D ADA R R A R I VEEVDAA A RQA G 240
Cdd:TIGR00211 158 I RP IH W I V V L L GD D VIP I E I L N V KS DR T TRGHRF LGEDEVSIES P DA Y PEQ L KEN HV IA D PKE R K A M I LQQIETL A AKL G 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 241 G S A R I SD D N L EQ VV N LVE W P S A V L CS FE RA FL AV P Q E A L IE TM EIN Q KF FPV L D DG GKL TEQ FI GIA N IV SKD VAEVAK G 320
Cdd:TIGR00211 238 G I A D I DE D L L DE VV S LVE Y P T A L L GK FE EE FL SL P A E V L VT TM KEH Q RY FPV Y D KD GKL LPH FI TVS N GN SKD PQKIIL G 317
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 321 Y E R V I R P R FA DA K FF FDE DLK QG L EAMGAG L AS V TY Q AK LGT VA DKV A R VAAL A EA IA P Q V GAD PVQ --- AR RAA E L A K N 397
Cdd:TIGR00211 318 N E K V L R A R LS DA E FF YKT DLK KP L DDNLPR L ET V VF Q QE LGT LK DKV D R ISII A GY IA Q Q L GAD ENM leh VK RAA L L S K A 397
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 398 DL QSR MV N EFPELQGI A G RH YA KAA GE PSEISL A ID E A Y Q PR F AGDD IAL S PL G K V L A I A ER LDTLA GG F AA G LK PTG N K 477
Cdd:TIGR00211 398 DL VTN MV Y EFPELQGI M G EK YA RHD GE DEAVAV A VN E Q Y L PR S AGDD LPS S LV G S V V A M A DK LDTLA SI F GI G QI PTG S K 477
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 478 DPFALRR N ALG LA R TVI E SGFDL DL PK L IDVGLASLP D AVKP hadrnt ET V RA DL Y DF I L D R LKGYYA D K G VAATHFN AV 557
Cdd:TIGR00211 478 DPFALRR A ALG VL R IIV E KNLEI DL EE L LTNFVLLQG D KLTN ------ SN V LE DL E DF F L Q R FRALLQ D E G IDVDVIQ AV 551
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 558 AELTPASLY DFD R R ID A IGI F AT LP E AEALAAANKR IR NIL R K VEGEIPGD I DTT L LR EP A E E AL A EAV E A AIGDTGDAL 637
Cdd:TIGR00211 552 LARRETDPA DFD A R AQ A LSH F RD LP K AEALAAANKR VA NIL K K GNPVLSSE I QAN L FK EP K E K AL F EAV L A IKMNAQESF 631
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*....
gi 501408060 638 HRH DY VAV L AR LA R LR PQ VD A FFD G VMV N ADD PQ LR A NRL AL L KK L GDRLGS VA A I EH L 696
Cdd:TIGR00211 632 ESG DY ETA L EA LA E LR AP VD E FFD S VMV M ADD IE LR Q NRL NF L WG L RQLFLE VA D I SA L 690
PRK14908
PRK14908 glycine--tRNA ligase;
7-696
9.96e-166
glycine--tRNA ligase;
Pssm-ID: 237859 [Multi-domain]
Cd Length: 1000
Bit Score: 502.24
E-value: 9.96e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 7 LL I E L G T EELP VKAL P GLA Q AFFDGVLAG L EKRGVAV tr GDAKP L S TPRRLA V L LPG VA TEQ P EQRS E VL GP Y L NI A L DA 86
Cdd:PRK14908 314 LL F E I G S EELP ATFV P IGI Q QLESALREL L ADTRLGY -- EKLEV L G TPRRLA L L VED VA PRE P DAER E KR GP R L SA A F DA 391
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 87 E G K PT R A LA GF AAKA G I D --- WT AL ERTSDAKGER ------- F VH R AV t PG AQ AAA L L PEI L R E A I AAMPI PK P MRW GAH 156
Cdd:PRK14908 392 D G T PT P A GE GF FRSQ G V D ish LS AL DQDGAIEIRE ingveyl F LV R PE - PG RD AAA I L ANE L P E L I QSLRF PK K MRW DDP 470
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 157 EYAF ARP VQ WLV L L F GD TVI P AELLGVRGD R I TRGHR FMHDGDIALAAPGD Y IDA LR A A H V LVDADA RR AR IV EEVDAA A 236
Cdd:PRK14908 471 GLSY ARP IR WLV A L Y GD QIV P ISVGTLASG R T TRGHR QLDPPPVEIPSADG Y VET LR Q A C V ILSPKE RR EI IV QGLQNL A 550
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 237 RQAGGS A RISDDNLEQ V V NLVE W P SAV L CS F ERA FL AV P Q E A LI ET M EIN Q KF FPV L D DG G K L TEQ F IGI A NIVSK D va E 316
Cdd:PRK14908 551 ADVQID A IAEPRLIDE V T NLVE H P FVI L GQ F DEK FL EL P K E L LI AE M VKH Q RY FPV R D AQ G T L LNH F VIV A DGSPD D -- E 628
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 317 VAK G Y E R V I R P R FA D AK F F F DE DLK QG LE AMGAG L A SVTY QAK LG TV ADKV A R VA A L AE AI A PQVG - ADPVQAR RAAEL A 395
Cdd:PRK14908 629 IVR G N E K V L R A R LT D GA F L F KA DLK TP LE TFVEK L K SVTY FEA LG SL ADKV E R IK A H AE EL A ALLP l SARETLD RAAEL C 708
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 396 K N DL Q S R MVNEFPELQGI A GR H YA KA AGEP SEISL A ID E AYQ PR F AGD DIAL S PL G KV L AI A E RLD T L A G G FA A GLKPT G 475
Cdd:PRK14908 709 K F DL V S Q MVNEFPELQGI M GR Y YA QR AGEP EAVAQ A LG E HEL PR T AGD SLPA S TT G AL L SL A D RLD N L L G C FA L GLKPT S 788
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 476 NK DP F ALRR N ALG LARTVIESGFD LDL PK L idvg LA S L PDAVKPHADRNT E T V RADLYD F ILD RLK GYYA D K G VAATHFN 555
Cdd:PRK14908 789 SS DP Y ALRR Q ALG VLTLLRATPAS LDL ED L ---- LA R L ARHFPSTTVWVK E A V LDEVLE F VWG RLK TQLL D L G FDKDEIA 864
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 556 AV AELTPASLYDF D RRID A IGIFATLPEAEAL AAA NK R IRN IL rkv EGEIPGDI D TT LL R EPAE EA L AE A VE A AIGDTGD 635
Cdd:PRK14908 865 AV LPDACKNPAEA D KTAQ A LQELKSTEIFAEI AAA LN R LKR IL --- ASLSFSVT D AS LL L EPAE LN L KQ A LD A FREELTE 941
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 501408060 636 al HRH D YVAVL A RL A R L RPQ V DA FFD G V M V N ADD PQL R AN RL A LL KKLG D RLGS V AAIEH L 696
Cdd:PRK14908 942 -- LPI D LKDYV A AA A E L PQA V NT FFD E V L V M ADD EAI R NA RL G LL AAIR D LKFG V LDWDA L 1000
PksD
COG3321 Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ...
158-680
5.53e-04
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442550 [Multi-domain]
Cd Length: 1386
Bit Score: 43.32
E-value: 5.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 158 Y A F A R PVQWLV LL FGDTVIPAELLGVR G DRITRGHRFMHDGDIALA A PGDYIDALR AA HV L VDAD A RR A RIVEEVDAA A R 237
Cdd:COG3321 866 Y P F Q R EDAAAA LL AAALAAALAAAAAL G ALLLAALAAALAAALLAL A AAAAAALAL AA AA L AALL A LV A LAAAAAALL A L 945
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 238 Q A GGS A RISDDNLEQVVN L VEWPS A vlcsf ER A FL A VPQE A LIETMEINQKFFPV L DDGGK L TEQFIGIANIVSKDV A EV 317
Cdd:COG3321 946 A A AAA A AAAALAAAEAGA L LLLAA A ----- AA A AA A AAAA A AAAAAAAAAAAAAA L AAAAA L ALLAAAALLLAAAAA A AA 1020
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 318 AKGYERVIRPRF A DAKFFFDEDLKQGLE A MG A GL A SVTYQAK L GTV A DKVARVA A LAEAI A PQVGADPVQ A RR A AE LA KN 397
Cdd:COG3321 1021 LLALAALLAAAA A ALAAAAAAAAAAAAL A AL A AA A AAAAALA L ALA A LLLLAAL A ELALA A AALALAAAL A AA A LA LA LA 1100
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 398 D L QSRMVNEFPELQGIAGRHY A KAAGEPSEISL A IDE A YQPRF A GDDI AL SPLGKVL A I A ER L DTLAGGF AA G L KPTGNK 477
Cdd:COG3321 1101 A L AAALLLLALLAALALAAAA A ALLALAALLAA A AAA A ALAAA A AAAA AL ALAAAAA A L A AA L AAALLAA AA L L LALALA 1180
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 478 DPF AL RRNAL GLA RTVIESGFDLD L PK L IDVG LA S L PD A VKPHADRNTETVRAD L YDFILDRLKGYYADKGV AA THFNAV 557
Cdd:COG3321 1181 LAA AL AAALA GLA ALLLAALLAAL L AA L LALA LA A L AA A AAALLAAAAAAAALA L LALAAAAAAVAALAAAA AA LLAALA 1260
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501408060 558 A ELTP A SLYDFDRRID A IGIF A TLPEAE A L AAA NKRIRNI L RKVEGEIPGDIDTTLLREPAEE AL AE A VE AA IGDTGD A L 637
Cdd:COG3321 1261 A LALL A AAAGLAALAA A AAAA A AALALA A A AAA AAAALAA L LAAAAAAAAAAAAAAAAAALAA AL LA A AL AA LAAAVA A A 1340
490 500 510 520
....*....|....*....|....*....|....*....|...
gi 501408060 638 HRHDYV A VL A RL A RLRPQVD A FFDGVMVN A DDPQLR A NRLALL 680
Cdd:COG3321 1341 LALAAA A AA A AA A AAAAAAA A ALAAAAGA A AAAAAL A LAALAA 1383
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
