NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|501433153|ref|WP_012457811|]
View 

cell surface protein SprA [Porphyromonas gingivalis]

Protein Classification

cell surface protein SprA( domain architecture ID 11499494)

cell surface protein SprA forms the protein-conducting channel of the T9SS translocon, a water-filled conduit across the outer membrane that is large enough to allow the passage of folded proteins

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
surface_SprA TIGR04189
cell surface protein SprA; SprA is a cell surface protein widely distributed in the ...
 72-2498 0e+00

cell surface protein SprA; SprA is a cell surface protein widely distributed in the Bacteroidetes lineage. In Flavobacterium johnsoniae, a species that shows gliding motility, mutation disrupts gliding.


:

Pssm-ID: 275042 [Multi-domain]  Cd Length: 2315  Bit Score: 3165.95  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153    72 PLDLKTPDNIRTEFIYDEKTNTYLLVTKLGDKPLGSPIPFTPEEYLRYMQRDSIRRYFMEKERLEAQQEGKKRFNPLEMS 151
Cdd:TIGR04189    1 PLDLLLPSNIKTEIEYDSATDRYIVTEKLGDTDIRVPIVLTPEEYEDYVLRQSMKSYWRDKGDAAADKGTPERFKLLDPN 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   152 FDLGPA--EKLFGPGGVKLRTQGSAEVAMGAKSNATNNPSLPENARKHSYFDFSEKIQTNVQASVGTKLNFGMNYNTEST 229
Cdd:TIGR04189   81 FYVNSPffEKIFGGNKVDLRPQGSAELDFGGRYNKVDNPSLSPRQRKNLGFDFDQQISMNVTGKVGDRLKVNVNYDTQST 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   230 FDFDaKKLKLAFEGEEDDIIKLIEAGNVSMNTRNTLIRGGASLFGIHTKMQFDKLDVDMVVSQQEAETKRVNTKGGAQTT 309
Cdd:TIGR04189  161 FDFQ-NQLKLEYTGKEDDIIQRIEAGNVSMPLNSSLIRGAQSLFGIKAQLQFGKLTVTGVFSQQKSQAKEVTIKGGAQTT 239

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   310 PFELSAGQYDESRHFFFGHYFRDRYDGAMKTLPFISSGVKINRVEVWVTNKKGNFDNTqtRNIVAFTDLGEPEKIALPSV 389
Cdd:TIGR04189  240 EFEISADDYDENRHFFLSQYFRDNYDKALSGLPNINSGVQITRVEVWVTNKRNSTDNV--RNIVALQDLGEPESLYTKNN 317

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   390 SPSM--ATNGLPANQANSLYPLLVSMPNL-RFIDQVTQELSGIMQGGRDYEKVESARLLNPADYTVNSILGYISLNMRLS 466
Cdd:TIGR04189  318 NPIGptFTNRLPDNGANNLYPTLIGIPNGiRDIATVVQGFGGLVQQGRDYAKLENARKLEPSDYTYDPKLGYISLNQRLQ 397

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   467 ADEVLGIAFEYTYNGQVYQVGEFSTDRPDN--STENLYVKLLKGTAMSSTSPYWHFMMKNAYQLGGgvYNVQKEKFKLNV 544
Cdd:TIGR04189  398 NDEVLAVAFEYTYNGRVYQVGEFSTDGPPDtyTNQLLYVKLLKSPTLSPTLPIWDLMMKNVYSLGA--YQLSRENFKLNI 475

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   545 FYQSDSAGVYQPYISEGKIKGQLLLRVLGMDRLDAKQEPYPDGTYDFVDGYTILPQKGVVILPTVEPFGKTLADAF-GDP 623
Cdd:TIGR04189  476 YYKDDTTGNYLPPLPEGNSAGRPLLRVFGLDRLNQYNDPQPDGFFDFVEGITIDPQTGKIIFPVVEPFGSGLAKAFsTNN 555

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   624 VLAKKYCFQELYDTTAVAAQQVAEKNKFIFRGEYKASSGGDISLGAINVTPGSVVVTAGGVKLTENVDYTVDYLSGNVSI 703
Cdd:TIGR04189  556 ALADKYVFQELYDSTKTQAQQFAEKNKYRLKGRYKSSSGSEIRLGAINVPRGSVRVTAGGRTLQEGVDYTVDYQLGRVTI 635

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   704 INEAILSSGTPINVSLENRGLMNMQRKTMFGIDLNYNFSKDFTLGGTFMHLSEMPLTTKSVIGDESLKNTLWGLNLNYRT 783
Cdd:TIGR04189  636 LNEALLASGTPISVSYENNALFNTQRKTLLGTRLDYQFNKNFLIGATALNLSERPLTTKVNLGEEPINNTIWGVNANYKT 715

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   784 QAQWLTNALDLLPFVELTKPSEITVNAEFAHLIPGHYQSKYAQ-GNSYLDDFESSQSYIDLMNPYSWMLSSTPfqDGAGP 862
Cdd:TIGR04189  716 ESQWLTRAVDKLPFIQTTAPSNISFRGEFAQLRPGHNKASDFEeGTSYIDDFEGTQTGIDLRSPYSWYLASTP--DSAGD 793

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   863 VLFPEASLTNDIDYGKHRAKLSWFYIDPIFTReNSAGMPAHLKNDleQLSNHYVREVKTSELFPYRDQTYNMNSYLHTLL 942
Cdd:TIGR04189  794 SLFFEGTLSDDLDYGYNRAKLAWYSIDPVFYR-SSSQTPDYISDD--DLSNHFVREVFIQEIFPNRDVGSGQNQVLPTLD 870

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   943 MSYYPSERGPYNLNTvDMQSDGHLANPQSNWGGIMRKIDQSDFEASNIEYVEFWLLDPFIYNKeTAKGGSMYINLGEISE 1022
Cdd:TIGR04189  871 LAYYPNERGPYNYNP-DMTADGLLLNPEKRWGGIMRALDSSDFELSNIEYIEFWVLDPFIENA-TTNGGDLYFNLGSISE 948

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1023 EVLKDEKKFFENGMPINDDPAAIETTVWGKVPKRQGTGYAFDNTAGARPKQDVGFNGLTTAEEKDFptYTEYISRLASIV 1102
Cdd:TIGR04189  949 DILKDGRKFFENGLPVNGDTSNTDTTVWGRVPAQQSLVYAFDNDSGNRRKQDVGLDGLTSADESAF--FSSYLNALRGNV 1026

                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1103 SPDVlnqwstdpfSPINDPGGDNFHHYRGADYDEARKSILDRYKQYNGVEGNSAEATNNiTGYNVSSRLVPDVEDINQDN 1182
Cdd:TIGR04189 1027 DPDA---------KLLNDPAGDNYHYYLGDDYDSGPGSILERYKNYNGTEGNSPVAVQN-TNYNRGNTTIPDVEDINRDN 1096

                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1183 TLNEIEKYFQYRVELHPSKMVVGQNYIVDSRTKEVELRNGKKETITWYQFKVPVREFERKIGGITDFKTIRFMRVYLTNF 1262
Cdd:TIGR04189 1097 TLNTIESYFEYRVSLSPSDMVVGQNYIVDKREVEVELPNGQKETVTWYQFRIPIREYDSKVGNIQDFKSIRFMRMFMTGF 1176

                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1263 SEEVILRFGTFKLVRGDWRQYERELHPANL--TPISNAKLEVSTVNIEENGDRKPVNYVLPPGVLRSLDPQQAQSTQQNE 1340
Cdd:TIGR04189 1177 SDEVVLRFATLELVRGDWRTYTEPLSNTAPddPADDNTYVDVSTVNIEENSSRTPINYVLPPGVVREQDRTNNTNRQQNE 1256

                         1290      1300      1310      1320      1330      1340      1350      1360
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1341 QSMSLKVRTLAPGDARAVYKNTGYDLRRYKRLQMFTHAERLQDEDGtHTGNGDLSVFIRLGTDYRNNYYEYSIPLRLTPF 1420
Cdd:TIGR04189 1257 QALSLKVENLAPGDARGVYKNFNVDLRQYKRLRMFIHAEALADTNG-WLSDGELRAFIRLGTDFTNNYYEYEVPLKLTPV 1335

                         1370      1380      1390      1400      1410      1420      1430      1440
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1421 GTystnseSDRETVWPKENMFDFKLSALTDIKTKRNREKAAGNPAADFYRLFSEPDpeNTGNTVSVMGNPTLSEVKTIMI 1500
Cdd:TIGR04189 1336 GA------SSPEEVWPKENQLDIPLSDLTDLKLERNRLQSSSDPVVTYLDDGSEPS--NTGNRLSVVGNPSLGEVRTIMI 1407

                         1450      1460      1470      1480      1490      1500      1510      1520
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1501 GIRNNSTDI---RSAEIWVNELRLTDYDEKGGWAANTTINMQLSDLGSVNMRGQMITAGFGALDESLTQRAIEDTRTLNF 1577
Cdd:TIGR04189 1408 GVRNPSSDDgnnRSGEVWFNELRLSDFDEKGGWAAVANLNLNLADLANVSASGRMSTAGFGALDQKPNERAREDTLQYDV 1487

                         1530      1540      1550      1560      1570      1580      1590      1600
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1578 STNLELGKFFPEKAQISIPFYYSVSDEKVSPQYNPFDQDILLKDALDALPDKSSRDSLSRLSENRMTTHSLALNNIRVNV 1657
Cdd:TIGR04189 1488 ATNLNLGKLLPEKLGISIPFYYSYSSETITPEYDPLDGDILLKDALDAVRSQAERDSLRKLAEDYTTRKSFNLTNVRKIK 1567

                         1610      1620      1630      1640      1650      1660      1670      1680
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1658 KS--KHPMPYDPSNFSFNYSYNKSERHNPDMEYNTDLKWSAGMVYDYSPLLKPIKPFAKIKKAG---AYLKGLAINPLPS 1732
Cdd:TIGR04189 1568 TNgeKLNMPYDIENFSFSYSYSETSHRSPEIEYDLDQNYRAALEYNYTFKPKPVEPFKKLKKKSpylKLIKDFNFNYLPS 1647

                         1690      1700      1710      1720      1730      1740      1750      1760
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1733 KITFQTNMQRSYSEEQVRNFAYGVDQAEKlPVTFMQNFVWDRALAVNWNPINSLRINFRSGTNARIEEP-HVQVNKKLAP 1811
Cdd:TIGR04189 1648 SISFRTDLNRSFSETQFRDVDLSGPGTGE-PVLYQKNFTFNRLYNLNWNLTKSLRLNFNANTNAIIDEPnYGDVNGKLFG 1726

                         1770      1780      1790      1800      1810      1820      1830      1840
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1812 DEYKIWRDSVRRSIAELGTPIAYDQTFNVSYTLPTAQISALNWVNGSLTYNAVYNWDRGAKTTTEQIIGNTIRNQMTLEL 1891
Cdd:TIGR04189 1727 EDYHAWKDTVWRSFLDLGRPDRYTQTFNVNYTLPLDKIPALDWVNADYTYTADYNWQRGSLALREIDLGNTIRNQRSLQL 1806

                         1850      1860      1870      1880      1890      1900      1910      1920
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1892 PLQLNLTSLYRKSAFLKRIEQHiTNPEKKDPVKKAAQPltkkirllpdstvtlthtfaskkvrvsalgpdgkmyplktki 1971
Cdd:TIGR04189 1807 NGSLNLDKLYNKLGFLKQRSQD-KQSKRKKPQPRTEKP------------------------------------------ 1843

                         1930      1940      1950      1960      1970      1980      1990      2000
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1972 kdkntivilnNDSIEINVTVTPPRQngstpafGAIGERMVYALMMLKSIILNYRQSSGLHLPGFLPNIKAAggqGSVDGV 2051
Cdd:TIGR04189 1844 ----------EDKPKQNKTIIPPPR-------TKILSAVFRLLTMLKNIDVNYSQNKGTVLPGFLPSVKFF---GVDLGG 1903

                         2010      2020      2030      2040      2050      2060      2070      2080
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  2052 LAPGWDFAFGLTGEDFVEKAAQKGWLIGGQQNVSPSVYSESNSFEIKMTLEPIHELRINLTANRTDTRQTQTQY-----V 2126
Cdd:TIGR04189 1904 LAPGWGFVFGLQSDDFRDEAARNGWLTTFQSFNSQFTQRFSQNLQLRANLEPIPGLKIDLTANRTYTRRTQYRYnnvtgV 1983

                         2090      2100      2110      2120      2130      2140      2150      2160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  2127 YAGMPRTYGGNFVMTTIGLKGMFSSSSgaTGYASQAFNQFLHNREIIAGRIMAQYHGATYPSSGFmegsslagqpvsleT 2206
Cdd:TIGR04189 1984 YQSMTPNTSGNFSISTIAIGTAFSNSS--DGNSSEAFEKFRENRLTIANRLAEQYGGTVYPSDGF--------------G 2047

                         2170      2180      2190      2200      2210      2220      2230      2240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  2207 SAVSLNSADVLIPAFLSAYTQRSVGKIGLSAFPSLSsiLPNWNVSYTGLSKTELLKKYFRNVRINHAYRGIYNVDSYSSY 2286
Cdd:TIGR04189 2048 IGYGKNSQDVLIPAFLSAYTGSDPDKSRLSTFPPIP--LPNWRITYTGLMRIPWFKKNFRSVTLAHSYRSSYSVNSYRSN 2125

                         2250      2260      2270      2280      2290      2300      2310      2320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  2287 LGWVGLTDGSNLGFIQDpSDPSTLTPVasmpFDIPFVRLEDSFAPLLGVEVTFMSGLGINTDYRKTRRLNLNLSAYQLVE 2366
Cdd:TIGR04189 2126 LNYEDLGRDDGTGFRQD-NLNGNLIPT----YDISAVSLNEQFAPLIGVDATFKNGLTIKLEYNKSRALSLSLTNYQLTE 2200

                         2330      2340      2350      2360      2370      2380      2390      2400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  2367 SNEDQITVGMSYKAENFAKLIGLQRTRptrkakggqknnetmaPRTGGALTLRVDYAYSRTLTLIRKIQDAYTQATNGNI 2446
Cdd:TIGR04189 2201 TRNNEYVIGVGYRIKNFRSVFKGTGVR----------------KRLKNDLNLKLDFSLRDMFTLIRKLDLDFPQVTSGNK 2264

                         2410      2420      2430      2440      2450
                   ....*....|....*....|....*....|....*....|....*....|..
gi 501433153  2447 SHKINVSADYDISRMLTLRAYYDWDMNHPLVSSaSFPITNSNFGVSFRFNLT 2498
Cdd:TIGR04189 2265 RWSINPSADYDLSKNLTLRFYYDYQINEPLIST-SYPRTTTNFGLQLRFNLG 2315
 
Name Accession Description Interval E-value
surface_SprA TIGR04189
cell surface protein SprA; SprA is a cell surface protein widely distributed in the ...
 72-2498 0e+00

cell surface protein SprA; SprA is a cell surface protein widely distributed in the Bacteroidetes lineage. In Flavobacterium johnsoniae, a species that shows gliding motility, mutation disrupts gliding.


Pssm-ID: 275042 [Multi-domain]  Cd Length: 2315  Bit Score: 3165.95  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153    72 PLDLKTPDNIRTEFIYDEKTNTYLLVTKLGDKPLGSPIPFTPEEYLRYMQRDSIRRYFMEKERLEAQQEGKKRFNPLEMS 151
Cdd:TIGR04189    1 PLDLLLPSNIKTEIEYDSATDRYIVTEKLGDTDIRVPIVLTPEEYEDYVLRQSMKSYWRDKGDAAADKGTPERFKLLDPN 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   152 FDLGPA--EKLFGPGGVKLRTQGSAEVAMGAKSNATNNPSLPENARKHSYFDFSEKIQTNVQASVGTKLNFGMNYNTEST 229
Cdd:TIGR04189   81 FYVNSPffEKIFGGNKVDLRPQGSAELDFGGRYNKVDNPSLSPRQRKNLGFDFDQQISMNVTGKVGDRLKVNVNYDTQST 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   230 FDFDaKKLKLAFEGEEDDIIKLIEAGNVSMNTRNTLIRGGASLFGIHTKMQFDKLDVDMVVSQQEAETKRVNTKGGAQTT 309
Cdd:TIGR04189  161 FDFQ-NQLKLEYTGKEDDIIQRIEAGNVSMPLNSSLIRGAQSLFGIKAQLQFGKLTVTGVFSQQKSQAKEVTIKGGAQTT 239

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   310 PFELSAGQYDESRHFFFGHYFRDRYDGAMKTLPFISSGVKINRVEVWVTNKKGNFDNTqtRNIVAFTDLGEPEKIALPSV 389
Cdd:TIGR04189  240 EFEISADDYDENRHFFLSQYFRDNYDKALSGLPNINSGVQITRVEVWVTNKRNSTDNV--RNIVALQDLGEPESLYTKNN 317

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   390 SPSM--ATNGLPANQANSLYPLLVSMPNL-RFIDQVTQELSGIMQGGRDYEKVESARLLNPADYTVNSILGYISLNMRLS 466
Cdd:TIGR04189  318 NPIGptFTNRLPDNGANNLYPTLIGIPNGiRDIATVVQGFGGLVQQGRDYAKLENARKLEPSDYTYDPKLGYISLNQRLQ 397

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   467 ADEVLGIAFEYTYNGQVYQVGEFSTDRPDN--STENLYVKLLKGTAMSSTSPYWHFMMKNAYQLGGgvYNVQKEKFKLNV 544
Cdd:TIGR04189  398 NDEVLAVAFEYTYNGRVYQVGEFSTDGPPDtyTNQLLYVKLLKSPTLSPTLPIWDLMMKNVYSLGA--YQLSRENFKLNI 475

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   545 FYQSDSAGVYQPYISEGKIKGQLLLRVLGMDRLDAKQEPYPDGTYDFVDGYTILPQKGVVILPTVEPFGKTLADAF-GDP 623
Cdd:TIGR04189  476 YYKDDTTGNYLPPLPEGNSAGRPLLRVFGLDRLNQYNDPQPDGFFDFVEGITIDPQTGKIIFPVVEPFGSGLAKAFsTNN 555

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   624 VLAKKYCFQELYDTTAVAAQQVAEKNKFIFRGEYKASSGGDISLGAINVTPGSVVVTAGGVKLTENVDYTVDYLSGNVSI 703
Cdd:TIGR04189  556 ALADKYVFQELYDSTKTQAQQFAEKNKYRLKGRYKSSSGSEIRLGAINVPRGSVRVTAGGRTLQEGVDYTVDYQLGRVTI 635

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   704 INEAILSSGTPINVSLENRGLMNMQRKTMFGIDLNYNFSKDFTLGGTFMHLSEMPLTTKSVIGDESLKNTLWGLNLNYRT 783
Cdd:TIGR04189  636 LNEALLASGTPISVSYENNALFNTQRKTLLGTRLDYQFNKNFLIGATALNLSERPLTTKVNLGEEPINNTIWGVNANYKT 715

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   784 QAQWLTNALDLLPFVELTKPSEITVNAEFAHLIPGHYQSKYAQ-GNSYLDDFESSQSYIDLMNPYSWMLSSTPfqDGAGP 862
Cdd:TIGR04189  716 ESQWLTRAVDKLPFIQTTAPSNISFRGEFAQLRPGHNKASDFEeGTSYIDDFEGTQTGIDLRSPYSWYLASTP--DSAGD 793

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   863 VLFPEASLTNDIDYGKHRAKLSWFYIDPIFTReNSAGMPAHLKNDleQLSNHYVREVKTSELFPYRDQTYNMNSYLHTLL 942
Cdd:TIGR04189  794 SLFFEGTLSDDLDYGYNRAKLAWYSIDPVFYR-SSSQTPDYISDD--DLSNHFVREVFIQEIFPNRDVGSGQNQVLPTLD 870

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   943 MSYYPSERGPYNLNTvDMQSDGHLANPQSNWGGIMRKIDQSDFEASNIEYVEFWLLDPFIYNKeTAKGGSMYINLGEISE 1022
Cdd:TIGR04189  871 LAYYPNERGPYNYNP-DMTADGLLLNPEKRWGGIMRALDSSDFELSNIEYIEFWVLDPFIENA-TTNGGDLYFNLGSISE 948

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1023 EVLKDEKKFFENGMPINDDPAAIETTVWGKVPKRQGTGYAFDNTAGARPKQDVGFNGLTTAEEKDFptYTEYISRLASIV 1102
Cdd:TIGR04189  949 DILKDGRKFFENGLPVNGDTSNTDTTVWGRVPAQQSLVYAFDNDSGNRRKQDVGLDGLTSADESAF--FSSYLNALRGNV 1026

                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1103 SPDVlnqwstdpfSPINDPGGDNFHHYRGADYDEARKSILDRYKQYNGVEGNSAEATNNiTGYNVSSRLVPDVEDINQDN 1182
Cdd:TIGR04189 1027 DPDA---------KLLNDPAGDNYHYYLGDDYDSGPGSILERYKNYNGTEGNSPVAVQN-TNYNRGNTTIPDVEDINRDN 1096

                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1183 TLNEIEKYFQYRVELHPSKMVVGQNYIVDSRTKEVELRNGKKETITWYQFKVPVREFERKIGGITDFKTIRFMRVYLTNF 1262
Cdd:TIGR04189 1097 TLNTIESYFEYRVSLSPSDMVVGQNYIVDKREVEVELPNGQKETVTWYQFRIPIREYDSKVGNIQDFKSIRFMRMFMTGF 1176

                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1263 SEEVILRFGTFKLVRGDWRQYERELHPANL--TPISNAKLEVSTVNIEENGDRKPVNYVLPPGVLRSLDPQQAQSTQQNE 1340
Cdd:TIGR04189 1177 SDEVVLRFATLELVRGDWRTYTEPLSNTAPddPADDNTYVDVSTVNIEENSSRTPINYVLPPGVVREQDRTNNTNRQQNE 1256

                         1290      1300      1310      1320      1330      1340      1350      1360
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1341 QSMSLKVRTLAPGDARAVYKNTGYDLRRYKRLQMFTHAERLQDEDGtHTGNGDLSVFIRLGTDYRNNYYEYSIPLRLTPF 1420
Cdd:TIGR04189 1257 QALSLKVENLAPGDARGVYKNFNVDLRQYKRLRMFIHAEALADTNG-WLSDGELRAFIRLGTDFTNNYYEYEVPLKLTPV 1335

                         1370      1380      1390      1400      1410      1420      1430      1440
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1421 GTystnseSDRETVWPKENMFDFKLSALTDIKTKRNREKAAGNPAADFYRLFSEPDpeNTGNTVSVMGNPTLSEVKTIMI 1500
Cdd:TIGR04189 1336 GA------SSPEEVWPKENQLDIPLSDLTDLKLERNRLQSSSDPVVTYLDDGSEPS--NTGNRLSVVGNPSLGEVRTIMI 1407

                         1450      1460      1470      1480      1490      1500      1510      1520
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1501 GIRNNSTDI---RSAEIWVNELRLTDYDEKGGWAANTTINMQLSDLGSVNMRGQMITAGFGALDESLTQRAIEDTRTLNF 1577
Cdd:TIGR04189 1408 GVRNPSSDDgnnRSGEVWFNELRLSDFDEKGGWAAVANLNLNLADLANVSASGRMSTAGFGALDQKPNERAREDTLQYDV 1487

                         1530      1540      1550      1560      1570      1580      1590      1600
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1578 STNLELGKFFPEKAQISIPFYYSVSDEKVSPQYNPFDQDILLKDALDALPDKSSRDSLSRLSENRMTTHSLALNNIRVNV 1657
Cdd:TIGR04189 1488 ATNLNLGKLLPEKLGISIPFYYSYSSETITPEYDPLDGDILLKDALDAVRSQAERDSLRKLAEDYTTRKSFNLTNVRKIK 1567

                         1610      1620      1630      1640      1650      1660      1670      1680
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1658 KS--KHPMPYDPSNFSFNYSYNKSERHNPDMEYNTDLKWSAGMVYDYSPLLKPIKPFAKIKKAG---AYLKGLAINPLPS 1732
Cdd:TIGR04189 1568 TNgeKLNMPYDIENFSFSYSYSETSHRSPEIEYDLDQNYRAALEYNYTFKPKPVEPFKKLKKKSpylKLIKDFNFNYLPS 1647

                         1690      1700      1710      1720      1730      1740      1750      1760
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1733 KITFQTNMQRSYSEEQVRNFAYGVDQAEKlPVTFMQNFVWDRALAVNWNPINSLRINFRSGTNARIEEP-HVQVNKKLAP 1811
Cdd:TIGR04189 1648 SISFRTDLNRSFSETQFRDVDLSGPGTGE-PVLYQKNFTFNRLYNLNWNLTKSLRLNFNANTNAIIDEPnYGDVNGKLFG 1726

                         1770      1780      1790      1800      1810      1820      1830      1840
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1812 DEYKIWRDSVRRSIAELGTPIAYDQTFNVSYTLPTAQISALNWVNGSLTYNAVYNWDRGAKTTTEQIIGNTIRNQMTLEL 1891
Cdd:TIGR04189 1727 EDYHAWKDTVWRSFLDLGRPDRYTQTFNVNYTLPLDKIPALDWVNADYTYTADYNWQRGSLALREIDLGNTIRNQRSLQL 1806

                         1850      1860      1870      1880      1890      1900      1910      1920
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1892 PLQLNLTSLYRKSAFLKRIEQHiTNPEKKDPVKKAAQPltkkirllpdstvtlthtfaskkvrvsalgpdgkmyplktki 1971
Cdd:TIGR04189 1807 NGSLNLDKLYNKLGFLKQRSQD-KQSKRKKPQPRTEKP------------------------------------------ 1843

                         1930      1940      1950      1960      1970      1980      1990      2000
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1972 kdkntivilnNDSIEINVTVTPPRQngstpafGAIGERMVYALMMLKSIILNYRQSSGLHLPGFLPNIKAAggqGSVDGV 2051
Cdd:TIGR04189 1844 ----------EDKPKQNKTIIPPPR-------TKILSAVFRLLTMLKNIDVNYSQNKGTVLPGFLPSVKFF---GVDLGG 1903

                         2010      2020      2030      2040      2050      2060      2070      2080
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  2052 LAPGWDFAFGLTGEDFVEKAAQKGWLIGGQQNVSPSVYSESNSFEIKMTLEPIHELRINLTANRTDTRQTQTQY-----V 2126
Cdd:TIGR04189 1904 LAPGWGFVFGLQSDDFRDEAARNGWLTTFQSFNSQFTQRFSQNLQLRANLEPIPGLKIDLTANRTYTRRTQYRYnnvtgV 1983

                         2090      2100      2110      2120      2130      2140      2150      2160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  2127 YAGMPRTYGGNFVMTTIGLKGMFSSSSgaTGYASQAFNQFLHNREIIAGRIMAQYHGATYPSSGFmegsslagqpvsleT 2206
Cdd:TIGR04189 1984 YQSMTPNTSGNFSISTIAIGTAFSNSS--DGNSSEAFEKFRENRLTIANRLAEQYGGTVYPSDGF--------------G 2047

                         2170      2180      2190      2200      2210      2220      2230      2240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  2207 SAVSLNSADVLIPAFLSAYTQRSVGKIGLSAFPSLSsiLPNWNVSYTGLSKTELLKKYFRNVRINHAYRGIYNVDSYSSY 2286
Cdd:TIGR04189 2048 IGYGKNSQDVLIPAFLSAYTGSDPDKSRLSTFPPIP--LPNWRITYTGLMRIPWFKKNFRSVTLAHSYRSSYSVNSYRSN 2125

                         2250      2260      2270      2280      2290      2300      2310      2320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  2287 LGWVGLTDGSNLGFIQDpSDPSTLTPVasmpFDIPFVRLEDSFAPLLGVEVTFMSGLGINTDYRKTRRLNLNLSAYQLVE 2366
Cdd:TIGR04189 2126 LNYEDLGRDDGTGFRQD-NLNGNLIPT----YDISAVSLNEQFAPLIGVDATFKNGLTIKLEYNKSRALSLSLTNYQLTE 2200

                         2330      2340      2350      2360      2370      2380      2390      2400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  2367 SNEDQITVGMSYKAENFAKLIGLQRTRptrkakggqknnetmaPRTGGALTLRVDYAYSRTLTLIRKIQDAYTQATNGNI 2446
Cdd:TIGR04189 2201 TRNNEYVIGVGYRIKNFRSVFKGTGVR----------------KRLKNDLNLKLDFSLRDMFTLIRKLDLDFPQVTSGNK 2264

                         2410      2420      2430      2440      2450
                   ....*....|....*....|....*....|....*....|....*....|..
gi 501433153  2447 SHKINVSADYDISRMLTLRAYYDWDMNHPLVSSaSFPITNSNFGVSFRFNLT 2498
Cdd:TIGR04189 2265 RWSINPSADYDLSKNLTLRFYYDYQINEPLIST-SYPRTTTNFGLQLRFNLG 2315
SprA_N pfam14349
Motility related/secretion protein; This domain is found repeated three times in the ...
 1093-1623 0e+00

Motility related/secretion protein; This domain is found repeated three times in the N-terminal half of the gliding motility-related SprA proteins. The role of this domain in motility is uncertain. It is also found in proteins required for secretion.


Pssm-ID: 433891  Cd Length: 509  Bit Score: 769.36  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1093 EYISRLASIVSPDVLNQWStdpfspiNDPGGDNFHHYRGADYDEARKSILDRYKQYNGVEGNSAEATNNITGYNVSSRLV 1172
Cdd:pfam14349    1 EYLNQIQGKVNPAVYDSIL-------NDPAGDDYHYFRGSDYDELKASILDRYKYINNPQGNSPDSDGSEESYDTSYKLL 73

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1173 PDVEDINQDNTLNEIEKYFQYRVELHPSKMVVGQNYIVDSRTKEVELRNGKKETITWYQFKVPVREFERKIGGITDFKTI 1252
Cdd:pfam14349   74 PDVEDINGDNTLNEYEKYYQYRISIRPVDLVVGTNYIVDNREVSPRNRNGTTETVTWYQFRIPISQYERKVGEILDFKSI 153

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1253 RFMRVYLTNFSEEVILRFGTFKLVRGDWRQYERELhpaNLTPISNAKLEVSTVNIEENGDRKPVNYVLPPGVLRSLDPQQ 1332
Cdd:pfam14349  154 RFMRMFLTNFDTPVVLRFATLNLVRGEWRPYEDDL---PNGAADLGKLEVGNVSIEENSDKTPVNYVLPPGISREQDPTQ 230

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1333 AQSTQQNEQSMSLKVRTLAPGDARAVYKNTGYDLRRYKRLQMFTHAERLqdeDGTHTGNGDLSVFIRLGTDYRNNYYEYS 1412
Cdd:pfam14349  231 PQLVEQNEQSLFLVKTNLSFGKATAVYKNTNLDLREYKSLQMFVHAQAL---NVTNLEDGTLTEFIRLGSDYDNNYYEYE 307

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1413 IPLRLTPFGtySTNSESDRETVWPKENMFDFKLSALTDIKTKRNRekaagnPAADFYRLFSEPDPeNTGNTVSVMGNPTL 1492
Cdd:pfam14349  308 IPLKLTPFG--NSQVQIDRLEVWPTENMLDINLSVLTNLKKRRNK------GLASYSQPYSEYDA-DPNNKRNIVGNPDL 378

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1493 SEVKTIMIGIRNNSTDIRSAEIWVNELRLTDYDEKGGWAANTTINMQLSDLGSVNMRGQMITAGFGALDESLTQRAIEDT 1572
Cdd:pfam14349  379 GEVKTIMIGVRNNSGSPKSGEVWVNELRLNGYDPSGGWAANGNLNVQLRDLGTVNLSGQYTTAGFGGLEQGVNQRKLENG 458

                          490       500       510       520       530
                   ....*....|....*....|....*....|....*....|....*....|.
gi 501433153  1573 RTLNFSTNLELGKFFPEKAQISIPFYYSVSDEKVSPQYNPFDQDILLKDAL 1623
Cdd:pfam14349  459 REYSVNTNLGLGKFFPEKAKVSIPLYYSYTKEKTTPKYNPLDTDISLSDAL 509
 
Name Accession Description Interval E-value
surface_SprA TIGR04189
cell surface protein SprA; SprA is a cell surface protein widely distributed in the ...
 72-2498 0e+00

cell surface protein SprA; SprA is a cell surface protein widely distributed in the Bacteroidetes lineage. In Flavobacterium johnsoniae, a species that shows gliding motility, mutation disrupts gliding.


Pssm-ID: 275042 [Multi-domain]  Cd Length: 2315  Bit Score: 3165.95  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153    72 PLDLKTPDNIRTEFIYDEKTNTYLLVTKLGDKPLGSPIPFTPEEYLRYMQRDSIRRYFMEKERLEAQQEGKKRFNPLEMS 151
Cdd:TIGR04189    1 PLDLLLPSNIKTEIEYDSATDRYIVTEKLGDTDIRVPIVLTPEEYEDYVLRQSMKSYWRDKGDAAADKGTPERFKLLDPN 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   152 FDLGPA--EKLFGPGGVKLRTQGSAEVAMGAKSNATNNPSLPENARKHSYFDFSEKIQTNVQASVGTKLNFGMNYNTEST 229
Cdd:TIGR04189   81 FYVNSPffEKIFGGNKVDLRPQGSAELDFGGRYNKVDNPSLSPRQRKNLGFDFDQQISMNVTGKVGDRLKVNVNYDTQST 160

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   230 FDFDaKKLKLAFEGEEDDIIKLIEAGNVSMNTRNTLIRGGASLFGIHTKMQFDKLDVDMVVSQQEAETKRVNTKGGAQTT 309
Cdd:TIGR04189  161 FDFQ-NQLKLEYTGKEDDIIQRIEAGNVSMPLNSSLIRGAQSLFGIKAQLQFGKLTVTGVFSQQKSQAKEVTIKGGAQTT 239

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   310 PFELSAGQYDESRHFFFGHYFRDRYDGAMKTLPFISSGVKINRVEVWVTNKKGNFDNTqtRNIVAFTDLGEPEKIALPSV 389
Cdd:TIGR04189  240 EFEISADDYDENRHFFLSQYFRDNYDKALSGLPNINSGVQITRVEVWVTNKRNSTDNV--RNIVALQDLGEPESLYTKNN 317

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   390 SPSM--ATNGLPANQANSLYPLLVSMPNL-RFIDQVTQELSGIMQGGRDYEKVESARLLNPADYTVNSILGYISLNMRLS 466
Cdd:TIGR04189  318 NPIGptFTNRLPDNGANNLYPTLIGIPNGiRDIATVVQGFGGLVQQGRDYAKLENARKLEPSDYTYDPKLGYISLNQRLQ 397

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   467 ADEVLGIAFEYTYNGQVYQVGEFSTDRPDN--STENLYVKLLKGTAMSSTSPYWHFMMKNAYQLGGgvYNVQKEKFKLNV 544
Cdd:TIGR04189  398 NDEVLAVAFEYTYNGRVYQVGEFSTDGPPDtyTNQLLYVKLLKSPTLSPTLPIWDLMMKNVYSLGA--YQLSRENFKLNI 475

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   545 FYQSDSAGVYQPYISEGKIKGQLLLRVLGMDRLDAKQEPYPDGTYDFVDGYTILPQKGVVILPTVEPFGKTLADAF-GDP 623
Cdd:TIGR04189  476 YYKDDTTGNYLPPLPEGNSAGRPLLRVFGLDRLNQYNDPQPDGFFDFVEGITIDPQTGKIIFPVVEPFGSGLAKAFsTNN 555

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   624 VLAKKYCFQELYDTTAVAAQQVAEKNKFIFRGEYKASSGGDISLGAINVTPGSVVVTAGGVKLTENVDYTVDYLSGNVSI 703
Cdd:TIGR04189  556 ALADKYVFQELYDSTKTQAQQFAEKNKYRLKGRYKSSSGSEIRLGAINVPRGSVRVTAGGRTLQEGVDYTVDYQLGRVTI 635

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   704 INEAILSSGTPINVSLENRGLMNMQRKTMFGIDLNYNFSKDFTLGGTFMHLSEMPLTTKSVIGDESLKNTLWGLNLNYRT 783
Cdd:TIGR04189  636 LNEALLASGTPISVSYENNALFNTQRKTLLGTRLDYQFNKNFLIGATALNLSERPLTTKVNLGEEPINNTIWGVNANYKT 715

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   784 QAQWLTNALDLLPFVELTKPSEITVNAEFAHLIPGHYQSKYAQ-GNSYLDDFESSQSYIDLMNPYSWMLSSTPfqDGAGP 862
Cdd:TIGR04189  716 ESQWLTRAVDKLPFIQTTAPSNISFRGEFAQLRPGHNKASDFEeGTSYIDDFEGTQTGIDLRSPYSWYLASTP--DSAGD 793

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   863 VLFPEASLTNDIDYGKHRAKLSWFYIDPIFTReNSAGMPAHLKNDleQLSNHYVREVKTSELFPYRDQTYNMNSYLHTLL 942
Cdd:TIGR04189  794 SLFFEGTLSDDLDYGYNRAKLAWYSIDPVFYR-SSSQTPDYISDD--DLSNHFVREVFIQEIFPNRDVGSGQNQVLPTLD 870

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   943 MSYYPSERGPYNLNTvDMQSDGHLANPQSNWGGIMRKIDQSDFEASNIEYVEFWLLDPFIYNKeTAKGGSMYINLGEISE 1022
Cdd:TIGR04189  871 LAYYPNERGPYNYNP-DMTADGLLLNPEKRWGGIMRALDSSDFELSNIEYIEFWVLDPFIENA-TTNGGDLYFNLGSISE 948

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1023 EVLKDEKKFFENGMPINDDPAAIETTVWGKVPKRQGTGYAFDNTAGARPKQDVGFNGLTTAEEKDFptYTEYISRLASIV 1102
Cdd:TIGR04189  949 DILKDGRKFFENGLPVNGDTSNTDTTVWGRVPAQQSLVYAFDNDSGNRRKQDVGLDGLTSADESAF--FSSYLNALRGNV 1026

                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1103 SPDVlnqwstdpfSPINDPGGDNFHHYRGADYDEARKSILDRYKQYNGVEGNSAEATNNiTGYNVSSRLVPDVEDINQDN 1182
Cdd:TIGR04189 1027 DPDA---------KLLNDPAGDNYHYYLGDDYDSGPGSILERYKNYNGTEGNSPVAVQN-TNYNRGNTTIPDVEDINRDN 1096

                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1183 TLNEIEKYFQYRVELHPSKMVVGQNYIVDSRTKEVELRNGKKETITWYQFKVPVREFERKIGGITDFKTIRFMRVYLTNF 1262
Cdd:TIGR04189 1097 TLNTIESYFEYRVSLSPSDMVVGQNYIVDKREVEVELPNGQKETVTWYQFRIPIREYDSKVGNIQDFKSIRFMRMFMTGF 1176

                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1263 SEEVILRFGTFKLVRGDWRQYERELHPANL--TPISNAKLEVSTVNIEENGDRKPVNYVLPPGVLRSLDPQQAQSTQQNE 1340
Cdd:TIGR04189 1177 SDEVVLRFATLELVRGDWRTYTEPLSNTAPddPADDNTYVDVSTVNIEENSSRTPINYVLPPGVVREQDRTNNTNRQQNE 1256

                         1290      1300      1310      1320      1330      1340      1350      1360
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1341 QSMSLKVRTLAPGDARAVYKNTGYDLRRYKRLQMFTHAERLQDEDGtHTGNGDLSVFIRLGTDYRNNYYEYSIPLRLTPF 1420
Cdd:TIGR04189 1257 QALSLKVENLAPGDARGVYKNFNVDLRQYKRLRMFIHAEALADTNG-WLSDGELRAFIRLGTDFTNNYYEYEVPLKLTPV 1335

                         1370      1380      1390      1400      1410      1420      1430      1440
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1421 GTystnseSDRETVWPKENMFDFKLSALTDIKTKRNREKAAGNPAADFYRLFSEPDpeNTGNTVSVMGNPTLSEVKTIMI 1500
Cdd:TIGR04189 1336 GA------SSPEEVWPKENQLDIPLSDLTDLKLERNRLQSSSDPVVTYLDDGSEPS--NTGNRLSVVGNPSLGEVRTIMI 1407

                         1450      1460      1470      1480      1490      1500      1510      1520
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1501 GIRNNSTDI---RSAEIWVNELRLTDYDEKGGWAANTTINMQLSDLGSVNMRGQMITAGFGALDESLTQRAIEDTRTLNF 1577
Cdd:TIGR04189 1408 GVRNPSSDDgnnRSGEVWFNELRLSDFDEKGGWAAVANLNLNLADLANVSASGRMSTAGFGALDQKPNERAREDTLQYDV 1487

                         1530      1540      1550      1560      1570      1580      1590      1600
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1578 STNLELGKFFPEKAQISIPFYYSVSDEKVSPQYNPFDQDILLKDALDALPDKSSRDSLSRLSENRMTTHSLALNNIRVNV 1657
Cdd:TIGR04189 1488 ATNLNLGKLLPEKLGISIPFYYSYSSETITPEYDPLDGDILLKDALDAVRSQAERDSLRKLAEDYTTRKSFNLTNVRKIK 1567

                         1610      1620      1630      1640      1650      1660      1670      1680
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1658 KS--KHPMPYDPSNFSFNYSYNKSERHNPDMEYNTDLKWSAGMVYDYSPLLKPIKPFAKIKKAG---AYLKGLAINPLPS 1732
Cdd:TIGR04189 1568 TNgeKLNMPYDIENFSFSYSYSETSHRSPEIEYDLDQNYRAALEYNYTFKPKPVEPFKKLKKKSpylKLIKDFNFNYLPS 1647

                         1690      1700      1710      1720      1730      1740      1750      1760
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1733 KITFQTNMQRSYSEEQVRNFAYGVDQAEKlPVTFMQNFVWDRALAVNWNPINSLRINFRSGTNARIEEP-HVQVNKKLAP 1811
Cdd:TIGR04189 1648 SISFRTDLNRSFSETQFRDVDLSGPGTGE-PVLYQKNFTFNRLYNLNWNLTKSLRLNFNANTNAIIDEPnYGDVNGKLFG 1726

                         1770      1780      1790      1800      1810      1820      1830      1840
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1812 DEYKIWRDSVRRSIAELGTPIAYDQTFNVSYTLPTAQISALNWVNGSLTYNAVYNWDRGAKTTTEQIIGNTIRNQMTLEL 1891
Cdd:TIGR04189 1727 EDYHAWKDTVWRSFLDLGRPDRYTQTFNVNYTLPLDKIPALDWVNADYTYTADYNWQRGSLALREIDLGNTIRNQRSLQL 1806

                         1850      1860      1870      1880      1890      1900      1910      1920
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1892 PLQLNLTSLYRKSAFLKRIEQHiTNPEKKDPVKKAAQPltkkirllpdstvtlthtfaskkvrvsalgpdgkmyplktki 1971
Cdd:TIGR04189 1807 NGSLNLDKLYNKLGFLKQRSQD-KQSKRKKPQPRTEKP------------------------------------------ 1843

                         1930      1940      1950      1960      1970      1980      1990      2000
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1972 kdkntivilnNDSIEINVTVTPPRQngstpafGAIGERMVYALMMLKSIILNYRQSSGLHLPGFLPNIKAAggqGSVDGV 2051
Cdd:TIGR04189 1844 ----------EDKPKQNKTIIPPPR-------TKILSAVFRLLTMLKNIDVNYSQNKGTVLPGFLPSVKFF---GVDLGG 1903

                         2010      2020      2030      2040      2050      2060      2070      2080
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  2052 LAPGWDFAFGLTGEDFVEKAAQKGWLIGGQQNVSPSVYSESNSFEIKMTLEPIHELRINLTANRTDTRQTQTQY-----V 2126
Cdd:TIGR04189 1904 LAPGWGFVFGLQSDDFRDEAARNGWLTTFQSFNSQFTQRFSQNLQLRANLEPIPGLKIDLTANRTYTRRTQYRYnnvtgV 1983

                         2090      2100      2110      2120      2130      2140      2150      2160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  2127 YAGMPRTYGGNFVMTTIGLKGMFSSSSgaTGYASQAFNQFLHNREIIAGRIMAQYHGATYPSSGFmegsslagqpvsleT 2206
Cdd:TIGR04189 1984 YQSMTPNTSGNFSISTIAIGTAFSNSS--DGNSSEAFEKFRENRLTIANRLAEQYGGTVYPSDGF--------------G 2047

                         2170      2180      2190      2200      2210      2220      2230      2240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  2207 SAVSLNSADVLIPAFLSAYTQRSVGKIGLSAFPSLSsiLPNWNVSYTGLSKTELLKKYFRNVRINHAYRGIYNVDSYSSY 2286
Cdd:TIGR04189 2048 IGYGKNSQDVLIPAFLSAYTGSDPDKSRLSTFPPIP--LPNWRITYTGLMRIPWFKKNFRSVTLAHSYRSSYSVNSYRSN 2125

                         2250      2260      2270      2280      2290      2300      2310      2320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  2287 LGWVGLTDGSNLGFIQDpSDPSTLTPVasmpFDIPFVRLEDSFAPLLGVEVTFMSGLGINTDYRKTRRLNLNLSAYQLVE 2366
Cdd:TIGR04189 2126 LNYEDLGRDDGTGFRQD-NLNGNLIPT----YDISAVSLNEQFAPLIGVDATFKNGLTIKLEYNKSRALSLSLTNYQLTE 2200

                         2330      2340      2350      2360      2370      2380      2390      2400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  2367 SNEDQITVGMSYKAENFAKLIGLQRTRptrkakggqknnetmaPRTGGALTLRVDYAYSRTLTLIRKIQDAYTQATNGNI 2446
Cdd:TIGR04189 2201 TRNNEYVIGVGYRIKNFRSVFKGTGVR----------------KRLKNDLNLKLDFSLRDMFTLIRKLDLDFPQVTSGNK 2264

                         2410      2420      2430      2440      2450
                   ....*....|....*....|....*....|....*....|....*....|..
gi 501433153  2447 SHKINVSADYDISRMLTLRAYYDWDMNHPLVSSaSFPITNSNFGVSFRFNLT 2498
Cdd:TIGR04189 2265 RWSINPSADYDLSKNLTLRFYYDYQINEPLIST-SYPRTTTNFGLQLRFNLG 2315
SprA_N pfam14349
Motility related/secretion protein; This domain is found repeated three times in the ...
 1093-1623 0e+00

Motility related/secretion protein; This domain is found repeated three times in the N-terminal half of the gliding motility-related SprA proteins. The role of this domain in motility is uncertain. It is also found in proteins required for secretion.


Pssm-ID: 433891  Cd Length: 509  Bit Score: 769.36  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1093 EYISRLASIVSPDVLNQWStdpfspiNDPGGDNFHHYRGADYDEARKSILDRYKQYNGVEGNSAEATNNITGYNVSSRLV 1172
Cdd:pfam14349    1 EYLNQIQGKVNPAVYDSIL-------NDPAGDDYHYFRGSDYDELKASILDRYKYINNPQGNSPDSDGSEESYDTSYKLL 73

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1173 PDVEDINQDNTLNEIEKYFQYRVELHPSKMVVGQNYIVDSRTKEVELRNGKKETITWYQFKVPVREFERKIGGITDFKTI 1252
Cdd:pfam14349   74 PDVEDINGDNTLNEYEKYYQYRISIRPVDLVVGTNYIVDNREVSPRNRNGTTETVTWYQFRIPISQYERKVGEILDFKSI 153

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1253 RFMRVYLTNFSEEVILRFGTFKLVRGDWRQYERELhpaNLTPISNAKLEVSTVNIEENGDRKPVNYVLPPGVLRSLDPQQ 1332
Cdd:pfam14349  154 RFMRMFLTNFDTPVVLRFATLNLVRGEWRPYEDDL---PNGAADLGKLEVGNVSIEENSDKTPVNYVLPPGISREQDPTQ 230

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1333 AQSTQQNEQSMSLKVRTLAPGDARAVYKNTGYDLRRYKRLQMFTHAERLqdeDGTHTGNGDLSVFIRLGTDYRNNYYEYS 1412
Cdd:pfam14349  231 PQLVEQNEQSLFLVKTNLSFGKATAVYKNTNLDLREYKSLQMFVHAQAL---NVTNLEDGTLTEFIRLGSDYDNNYYEYE 307

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1413 IPLRLTPFGtySTNSESDRETVWPKENMFDFKLSALTDIKTKRNRekaagnPAADFYRLFSEPDPeNTGNTVSVMGNPTL 1492
Cdd:pfam14349  308 IPLKLTPFG--NSQVQIDRLEVWPTENMLDINLSVLTNLKKRRNK------GLASYSQPYSEYDA-DPNNKRNIVGNPDL 378

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153  1493 SEVKTIMIGIRNNSTDIRSAEIWVNELRLTDYDEKGGWAANTTINMQLSDLGSVNMRGQMITAGFGALDESLTQRAIEDT 1572
Cdd:pfam14349  379 GEVKTIMIGVRNNSGSPKSGEVWVNELRLNGYDPSGGWAANGNLNVQLRDLGTVNLSGQYTTAGFGGLEQGVNQRKLENG 458

                          490       500       510       520       530
                   ....*....|....*....|....*....|....*....|....*....|.
gi 501433153  1573 RTLNFSTNLELGKFFPEKAQISIPFYYSVSDEKVSPQYNPFDQDILLKDAL 1623
Cdd:pfam14349  459 REYSVNTNLGLGKFFPEKAKVSIPLYYSYTKEKTTPKYNPLDTDISLSDAL 509
SprA_N pfam14349
Motility related/secretion protein; This domain is found repeated three times in the ...
 90-458 1.07e-12

Motility related/secretion protein; This domain is found repeated three times in the N-terminal half of the gliding motility-related SprA proteins. The role of this domain in motility is uncertain. It is also found in proteins required for secretion.


Pssm-ID: 433891  Cd Length: 509  Bit Score: 73.30  E-value: 1.07e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153    90 KTNTYLLVTKLGDKPLGSPIPFTPEEYLRYmqRDSIRRYFMEKERLEAQQEGKK-RFNPLEMSFDLGP-AEKLFGpgGVK 167
Cdd:pfam14349    9 KVNPAVYDSILNDPAGDDYHYFRGSDYDEL--KASILDRYKYINNPQGNSPDSDgSEESYDTSYKLLPdVEDING--DNT 84

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   168 LRTQGS--------AEVAMGAKSNATN-NPSL-PEN----ARKHSYFDFSEKIQTNVQaSVGTKLNFG---------MNY 224
Cdd:pfam14349   85 LNEYEKyyqyrisiRPVDLVVGTNYIVdNREVsPRNrngtTETVTWYQFRIPISQYER-KVGEILDFKsirfmrmflTNF 163

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   225 NTESTFDFDAKKL-KLAFEGEEDDI------IKLIEAGNVSM--NTRNT-----LIRGG----------------ASLFG 274
Cdd:pfam14349  164 DTPVVLRFATLNLvRGEWRPYEDDLpngaadLGKLEVGNVSIeeNSDKTpvnyvLPPGIsreqdptqpqlveqneQSLFL 243

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   275 IHTKMQFDKL-----DVDMVVSQQEAETKRVNTKGG-------AQTTPFELSAGQYDESRHfffghyfrdRYDGAMKTLP 342
Cdd:pfam14349  244 VKTNLSFGKAtavykNTNLDLREYKSLQMFVHAQALnvtnledGTLTEFIRLGSDYDNNYY---------EYEIPLKLTP 314

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501433153   343 FISSGVKINRVEVWVTNKKGNFDNT----------------------------QTRNIVAFTDLGEP--EKIALPSVSPS 392
Cdd:pfam14349  315 FGNSQVQIDRLEVWPTENMLDINLSvltnlkkrrnkglasysqpyseydadpnNKRNIVGNPDLGEVktIMIGVRNNSGS 394

                          410       420       430       440       450       460       470
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 501433153   393 MATNGLPANQ--ANSLYPLLVSMPN------LRFIDQVTQELSGIMQG-GRDYEKVESARLLNPADYTVNSILGY 458
Cdd:pfam14349  395 PKSGEVWVNElrLNGYDPSGGWAANgnlnvqLRDLGTVNLSGQYTTAGfGGLEQGVNQRKLENGREYSVNTNLGL 469
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH