|
Name |
Accession |
Description |
Interval |
E-value |
| PRK15121 |
PRK15121 |
MDR efflux pump AcrAB transcriptional activator RobA; |
9-286 |
3.15e-30 |
|
MDR efflux pump AcrAB transcriptional activator RobA;
Pssm-ID: 185076 [Multi-domain] Cd Length: 289 Bit Score: 115.49 E-value: 3.15e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 9 MLAWLEDNIYCNPSIDDLAQYMGYSRRFVYEVFYQYGQLPIGQYIRLRRLTIAAVSLRLTRQPIAAIAWQLSYDSPQTFS 88
Cdd:PRK15121 10 LLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKAAVALRLTSRPILDIALQYRFDSQQTFT 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 89 REFKKRFSLSPREYRCAVHWDTA-----LLLKKFDpegesLPQARFCSLPERVYRGSPMKYELRLSDMvlqSTSKTAVRQ 163
Cdd:PRK15121 90 RAFKKQFAQTPALYRRSPEWSAFgirppIRLGEFT-----LPEHEFVTLPETPLVGVTQSYSCSLEQI---SDFRHEMRV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 164 KVDRFFTAGGGRL-SVLSDYYAAR-NNELNVEVNAFVGCHRErgalPALTTNSTLTTRP-----GLYVGVEFYGSWARYA 236
Cdd:PRK15121 162 QFWRDFLGNAPTIpPVLYGLHETRpSQEKDDEQEVFYTTALE----PDQADGYVQTGHPvmlqgGEYVMFTYEGLGTGLQ 237
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 501535815 237 RLSSDLYMELLPALGASRREGVDIECFlerHTEGGPAAERR---YRVRYFIPV 286
Cdd:PRK15121 238 EFILTVYGTCMPMLNLTRRKGQDIERY---YPAEDAKAGDRpinLRCEYLIPI 287
|
|
| HTH_ARAC |
smart00342 |
helix_turn_helix, arabinose operon control protein; |
20-103 |
9.39e-22 |
|
helix_turn_helix, arabinose operon control protein;
Pssm-ID: 197666 [Multi-domain] Cd Length: 84 Bit Score: 86.84 E-value: 9.39e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 20 NPSIDDLAQYMGYSRRFVYEVFYQYGQLPIGQYIRLRRLTIAAVSLRLTRQPIAAIAWQLSYDSPQTFSREFKKRFSLSP 99
Cdd:smart00342 1 PLTLEDLAEALGVSPRHLQRLFKKETGTTPKQYLRDRRLERARRLLRDTDLSVTEIALRVGFSSQSYFSRAFKKLFGVTP 80
|
....
gi 501535815 100 REYR 103
Cdd:smart00342 81 SEYR 84
|
|
| AraC |
COG2207 |
AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; |
22-103 |
2.23e-17 |
|
AraC-type DNA-binding domain and AraC-containing proteins [Transcription];
Pssm-ID: 441809 [Multi-domain] Cd Length: 258 Bit Score: 79.82 E-value: 2.23e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 22 SIDDLAQYMGYSRRFVYEVFYQYGQLPIGQYIRLRRLTIAAVSLRLTRQPIAAIAWQLSYDSPQTFSREFKKRFSLSPRE 101
Cdd:COG2207 170 TLEELARELGLSPRTLSRLFKEETGTSPKQYLRELRLERAKRLLAETDLSISEIAYELGFSSQSHFSRAFKKRFGVTPSE 249
|
..
gi 501535815 102 YR 103
Cdd:COG2207 250 YR 251
|
|
| HTH_18 |
pfam12833 |
Helix-turn-helix domain; |
26-103 |
5.97e-15 |
|
Helix-turn-helix domain;
Pssm-ID: 432818 [Multi-domain] Cd Length: 81 Bit Score: 68.77 E-value: 5.97e-15
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 501535815 26 LAQYMGYSRRFVYEVFYQYGQLPIGQYIRLRRLTIAAVSL-RLTRQPIAAIAWQLSYDSPQTFSREFKKRFSLSPREYR 103
Cdd:pfam12833 1 LAAALGMSPRTLSRLFKRELGLSPKEYLRRLRLERARRLLlEDTGLSVAEIALALGFSDASHFSRAFRRLFGLTPSEYR 79
|
|
| adjacent_YSIRK |
TIGR04094 |
YSIRK-targeted surface antigen transcriptional regulator; Bacteria whose genomes encode only ... |
8-103 |
1.74e-07 |
|
YSIRK-targeted surface antigen transcriptional regulator; Bacteria whose genomes encode only one protein with the YSIRK variant form of signal peptide (TIGR01168) were examined for conserved genes near that one tagged protein. This protein is found adjacent to at various classes of repetitive or low-complexity YSIRK proteins (whether unique in genome or not), in a range of species (Enterococcus faecalis X98, Ruminococcus torques, Coprobacillus sp. D7, Lysinibacillus fusiformis ZC1, Streptococcus equi subsp. equi 4047, etc). The affliated YSIRK proteins include Streptococcal protective antigen (see ) and proteins with the Rib/alpha/Esp surface antigen repeat (see TIGR02331). The last quarter of this protein has an AraC family helix-turn-helix (HTH)transcriptional regulator domain.
Pssm-ID: 274977 [Multi-domain] Cd Length: 383 Bit Score: 51.99 E-value: 1.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 8 KMLAWLEDNIYCNPSIDDLAQYMGYSRRFVYEVFYQYGQLPIGQYIRLRRLTIAAVSLRlTRQPIAAIAWQLSYDSPQTF 87
Cdd:TIGR04094 289 AVIQYINLNLYDPLKVEEIAKQFFMSESKLRKLFKKEMGISIQEYISKRKIEEAKYLLR-SQIPVSEVSNELGFYDLSHF 367
|
90
....*....|....*.
gi 501535815 88 SREFKKRFSLSPREYR 103
Cdd:TIGR04094 368 SRTFKKHTGVSPKQYQ 383
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK15121 |
PRK15121 |
MDR efflux pump AcrAB transcriptional activator RobA; |
9-286 |
3.15e-30 |
|
MDR efflux pump AcrAB transcriptional activator RobA;
Pssm-ID: 185076 [Multi-domain] Cd Length: 289 Bit Score: 115.49 E-value: 3.15e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 9 MLAWLEDNIYCNPSIDDLAQYMGYSRRFVYEVFYQYGQLPIGQYIRLRRLTIAAVSLRLTRQPIAAIAWQLSYDSPQTFS 88
Cdd:PRK15121 10 LLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKAAVALRLTSRPILDIALQYRFDSQQTFT 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 89 REFKKRFSLSPREYRCAVHWDTA-----LLLKKFDpegesLPQARFCSLPERVYRGSPMKYELRLSDMvlqSTSKTAVRQ 163
Cdd:PRK15121 90 RAFKKQFAQTPALYRRSPEWSAFgirppIRLGEFT-----LPEHEFVTLPETPLVGVTQSYSCSLEQI---SDFRHEMRV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 164 KVDRFFTAGGGRL-SVLSDYYAAR-NNELNVEVNAFVGCHRErgalPALTTNSTLTTRP-----GLYVGVEFYGSWARYA 236
Cdd:PRK15121 162 QFWRDFLGNAPTIpPVLYGLHETRpSQEKDDEQEVFYTTALE----PDQADGYVQTGHPvmlqgGEYVMFTYEGLGTGLQ 237
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 501535815 237 RLSSDLYMELLPALGASRREGVDIECFlerHTEGGPAAERR---YRVRYFIPV 286
Cdd:PRK15121 238 EFILTVYGTCMPMLNLTRRKGQDIERY---YPAEDAKAGDRpinLRCEYLIPI 287
|
|
| PRK10219 |
PRK10219 |
superoxide response transcriptional regulator SoxS; |
1-103 |
4.11e-22 |
|
superoxide response transcriptional regulator SoxS;
Pssm-ID: 182314 [Multi-domain] Cd Length: 107 Bit Score: 88.83 E-value: 4.11e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 1 MKQMLYLKMLAWLEDNIYCNPSIDDLAQYMGYSRRFVYEVFYQYGQLPIGQYIRLRRLTIAAVSLRLTRQPIAAIAWQLS 80
Cdd:PRK10219 2 SHQKIIQTLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERPIFDIAMDLG 81
|
90 100
....*....|....*....|...
gi 501535815 81 YDSPQTFSREFKKRFSLSPREYR 103
Cdd:PRK10219 82 YVSQQTFSRVFRRQFDRTPSDYR 104
|
|
| HTH_ARAC |
smart00342 |
helix_turn_helix, arabinose operon control protein; |
20-103 |
9.39e-22 |
|
helix_turn_helix, arabinose operon control protein;
Pssm-ID: 197666 [Multi-domain] Cd Length: 84 Bit Score: 86.84 E-value: 9.39e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 20 NPSIDDLAQYMGYSRRFVYEVFYQYGQLPIGQYIRLRRLTIAAVSLRLTRQPIAAIAWQLSYDSPQTFSREFKKRFSLSP 99
Cdd:smart00342 1 PLTLEDLAEALGVSPRHLQRLFKKETGTTPKQYLRDRRLERARRLLRDTDLSVTEIALRVGFSSQSYFSRAFKKLFGVTP 80
|
....
gi 501535815 100 REYR 103
Cdd:smart00342 81 SEYR 84
|
|
| AraC |
COG2207 |
AraC-type DNA-binding domain and AraC-containing proteins [Transcription]; |
22-103 |
2.23e-17 |
|
AraC-type DNA-binding domain and AraC-containing proteins [Transcription];
Pssm-ID: 441809 [Multi-domain] Cd Length: 258 Bit Score: 79.82 E-value: 2.23e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 22 SIDDLAQYMGYSRRFVYEVFYQYGQLPIGQYIRLRRLTIAAVSLRLTRQPIAAIAWQLSYDSPQTFSREFKKRFSLSPRE 101
Cdd:COG2207 170 TLEELARELGLSPRTLSRLFKEETGTSPKQYLRELRLERAKRLLAETDLSISEIAYELGFSSQSHFSRAFKKRFGVTPSE 249
|
..
gi 501535815 102 YR 103
Cdd:COG2207 250 YR 251
|
|
| PRK11511 |
PRK11511 |
MDR efflux pump AcrAB transcriptional activator MarA; |
9-103 |
3.94e-15 |
|
MDR efflux pump AcrAB transcriptional activator MarA;
Pssm-ID: 236920 [Multi-domain] Cd Length: 127 Bit Score: 70.52 E-value: 3.94e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 9 MLAWLEDNIYCNPSIDDLAQYMGYSRRFVYEVFYQYGQLPIGQYIRLRRLTIAAVSLRLTRQPIAAIAWQLSYDSPQTFS 88
Cdd:PRK11511 14 ILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKLKESNEPILYLAERYGFESQQTLT 93
|
90
....*....|....*
gi 501535815 89 REFKKRFSLSPREYR 103
Cdd:PRK11511 94 RTFKNYFDVPPHKYR 108
|
|
| HTH_18 |
pfam12833 |
Helix-turn-helix domain; |
26-103 |
5.97e-15 |
|
Helix-turn-helix domain;
Pssm-ID: 432818 [Multi-domain] Cd Length: 81 Bit Score: 68.77 E-value: 5.97e-15
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 501535815 26 LAQYMGYSRRFVYEVFYQYGQLPIGQYIRLRRLTIAAVSL-RLTRQPIAAIAWQLSYDSPQTFSREFKKRFSLSPREYR 103
Cdd:pfam12833 1 LAAALGMSPRTLSRLFKRELGLSPKEYLRRLRLERARRLLlEDTGLSVAEIALALGFSDASHFSRAFRRLFGLTPSEYR 79
|
|
| GlxA |
COG4977 |
Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH ... |
7-103 |
1.21e-14 |
|
Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription];
Pssm-ID: 444002 [Multi-domain] Cd Length: 318 Bit Score: 72.88 E-value: 1.21e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 7 LKMLAWLEDNIYCNPSIDDLAQYMGYS-----RRFVYEVfyqyGQLPiGQYIRLRRLTIAAVSLRLTRQPIAAIAWQLSY 81
Cdd:COG4977 213 ARAQAWMEANLEEPLSVDELARRAGMSprtleRRFRAAT----GTTP-ARYLQRLRLERARRLLETTDLSIEEIAAACGF 287
|
90 100
....*....|....*....|..
gi 501535815 82 DSPQTFSREFKKRFSLSPREYR 103
Cdd:COG4977 288 GSASHFRRAFRRRFGVSPSAYR 309
|
|
| PRK09685 |
PRK09685 |
DNA-binding transcriptional activator FeaR; Provisional |
26-103 |
8.86e-11 |
|
DNA-binding transcriptional activator FeaR; Provisional
Pssm-ID: 236612 [Multi-domain] Cd Length: 302 Bit Score: 61.59 E-value: 8.86e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 26 LAQYMGYSRRFVYEVFYQYGqLPIGQYIRLRRLTIAAVSLR--LTRQPIAAIA--WQLSyDSPQtFSREFKKRFSLSPRE 101
Cdd:PRK09685 220 IAGELGISVRSLYRLFAEQG-LVVAQYIRNRRLDRCADDLRpaADDEKITSIAykWGFS-DSSH-FSTAFKQRFGVSPGE 296
|
..
gi 501535815 102 YR 103
Cdd:PRK09685 297 YR 298
|
|
| AdaA |
COG2169 |
Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), ... |
8-103 |
1.10e-08 |
|
Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains [Replication, recombination and repair];
Pssm-ID: 441772 [Multi-domain] Cd Length: 358 Bit Score: 55.44 E-value: 1.10e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 8 KMLAWLEDNIYCNPSIDDLAQYMGYSRRFVYEVFYQ-YGQLPIgQYIRLRRLTIAAVSLRlTRQPIAAIAWQLSYDSPQT 86
Cdd:COG2169 88 RACRLIEAGAEDRPSLEDLAARLGLSPRHLRRLFKAhTGVTPK-AYARARRLLRARQLLQ-TGLSVTDAAYAAGFGSLSR 165
|
90
....*....|....*..
gi 501535815 87 FSREFKKRFSLSPREYR 103
Cdd:COG2169 166 FYEAFKKLLGMTPSAYR 182
|
|
| PRK10572 |
PRK10572 |
arabinose operon transcriptional regulator AraC; |
13-103 |
8.25e-08 |
|
arabinose operon transcriptional regulator AraC;
Pssm-ID: 236717 [Multi-domain] Cd Length: 290 Bit Score: 52.67 E-value: 8.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 13 LEDNIYCNPSIDDLAQYMGYSRRFVYEVFYQygQLPIGqYIRLR---RLTIAAVSLRLTRQPIAAIAWQLSYDSPQTFSR 89
Cdd:PRK10572 192 ISDHLASEFDIESVAQHVCLSPSRLAHLFRQ--QLGIS-VLRWRedqRISRAKLLLQTTRMPIATIGRNVGYDDQLYFSR 268
|
90
....*....|....
gi 501535815 90 EFKKRFSLSPREYR 103
Cdd:PRK10572 269 VFKKCTGASPSEFR 282
|
|
| adjacent_YSIRK |
TIGR04094 |
YSIRK-targeted surface antigen transcriptional regulator; Bacteria whose genomes encode only ... |
8-103 |
1.74e-07 |
|
YSIRK-targeted surface antigen transcriptional regulator; Bacteria whose genomes encode only one protein with the YSIRK variant form of signal peptide (TIGR01168) were examined for conserved genes near that one tagged protein. This protein is found adjacent to at various classes of repetitive or low-complexity YSIRK proteins (whether unique in genome or not), in a range of species (Enterococcus faecalis X98, Ruminococcus torques, Coprobacillus sp. D7, Lysinibacillus fusiformis ZC1, Streptococcus equi subsp. equi 4047, etc). The affliated YSIRK proteins include Streptococcal protective antigen (see ) and proteins with the Rib/alpha/Esp surface antigen repeat (see TIGR02331). The last quarter of this protein has an AraC family helix-turn-helix (HTH)transcriptional regulator domain.
Pssm-ID: 274977 [Multi-domain] Cd Length: 383 Bit Score: 51.99 E-value: 1.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 8 KMLAWLEDNIYCNPSIDDLAQYMGYSRRFVYEVFYQYGQLPIGQYIRLRRLTIAAVSLRlTRQPIAAIAWQLSYDSPQTF 87
Cdd:TIGR04094 289 AVIQYINLNLYDPLKVEEIAKQFFMSESKLRKLFKKEMGISIQEYISKRKIEEAKYLLR-SQIPVSEVSNELGFYDLSHF 367
|
90
....*....|....*.
gi 501535815 88 SREFKKRFSLSPREYR 103
Cdd:TIGR04094 368 SRTFKKHTGVSPKQYQ 383
|
|
| PRK13503 |
PRK13503 |
HTH-type transcriptional activator RhaS; |
9-103 |
6.53e-05 |
|
HTH-type transcriptional activator RhaS;
Pssm-ID: 184094 [Multi-domain] Cd Length: 278 Bit Score: 43.51 E-value: 6.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 9 MLAWLEDNIYCNPSIDDLAQYMGYSRRFVYEVFYQYGQLPIGQYIRLRRLTIAAVSLRLTRQPIAAIAWQLSYDSPQTFS 88
Cdd:PRK13503 176 LLAWLEDHFAEEVNWEALADQFSLSLRTLHRQLKQQTGLTPQRYLNRLRLLKARHLLRHSDASVTDIAYRCGFGDSNHFS 255
|
90
....*....|....*
gi 501535815 89 REFKKRFSLSPREYR 103
Cdd:PRK13503 256 TLFRREFSWSPRDIR 270
|
|
| HTH_AraC |
pfam00165 |
Bacterial regulatory helix-turn-helix proteins, AraC family; In the absence of arabinose, the ... |
68-103 |
2.09e-04 |
|
Bacterial regulatory helix-turn-helix proteins, AraC family; In the absence of arabinose, the N-terminal arm of AraC binds to the DNA binding domain (pfam00165) and helps to hold the two DNA binding domains in a relative orientation that favours DNA looping. In the presence of arabinose, the arms bind over the arabinose on the dimerization domain, thus freeing the DNA-binding domains. The freed DNA-binding domains are then able to assume a conformation suitable for binding to the adjacent DNA sites that are utilized when AraC activates transcription, and hence AraC ceases looping the DNA when arabinose is added.
Pssm-ID: 425497 [Multi-domain] Cd Length: 42 Bit Score: 38.29 E-value: 2.09e-04
10 20 30
....*....|....*....|....*....|....*.
gi 501535815 68 TRQPIAAIAWQLSYdSPQTFSREFKKRFSLSPREYR 103
Cdd:pfam00165 7 TNLTIADIADELGF-SRSYFSRLFKKYTGVTPSQYR 41
|
|
| PRK13502 |
PRK13502 |
HTH-type transcriptional activator RhaR; |
2-103 |
3.84e-04 |
|
HTH-type transcriptional activator RhaR;
Pssm-ID: 184093 [Multi-domain] Cd Length: 282 Bit Score: 41.19 E-value: 3.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 2 KQMLYLKMLAWLEDNIYCNPSIDDLAQYMGYSRRFVYEVFYQYGQLPIGQYIRLRRLTIAAVSLRLTRQPIAAIAWQLSY 81
Cdd:PRK13502 174 RETLLDKLITALANSLECPFALDAFCQQEQCSERVLRQQFRAQTGMTINQYLRQVRICHAQYLLQHSPLMISEISMQCGF 253
|
90 100
....*....|....*....|..
gi 501535815 82 DSPQTFSREFKKRFSLSPREYR 103
Cdd:PRK13502 254 EDSNYFSVVFTRETGMTPSQWR 275
|
|
| GyrI-like |
pfam06445 |
GyrI-like small molecule binding domain; This family contains the small molecule binding ... |
221-286 |
4.46e-04 |
|
GyrI-like small molecule binding domain; This family contains the small molecule binding domain of a number of different bacterial transcription activators. This family also contains DNA gyrase inhibitors. The GyrI superfamily contains a diad of the SHS2 module, adapted for small-molecule binding. The GyrI superfamily includes a family of secreted forms that is found only in animals and the bacterial pathogen Leptospira.
Pssm-ID: 428947 Cd Length: 153 Bit Score: 40.08 E-value: 4.46e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 501535815 221 GLYVGVEFYGSWARYARLSSDLYMELLPALGASRREGVDIECFLERHTEGGPAaerRYRVRYFIPV 286
Cdd:pfam06445 91 GEYAVFRHKGPYDDLQETYAKIYGEWLPESGYERRDGPSFEIYLNDPREVPEE---ELKTEIYIPV 153
|
|
| ftrA |
PRK09393 |
transcriptional activator FtrA; Provisional |
8-103 |
1.71e-03 |
|
transcriptional activator FtrA; Provisional
Pssm-ID: 181818 [Multi-domain] Cd Length: 322 Bit Score: 39.56 E-value: 1.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 8 KMLAWLEDNIYCNPSIDDLAQYMGYSRRFVYEVFYQYGQLPIGQYIRLRRLTIAAVSLRLTRQPIAAIAWQLSYDSPQTF 87
Cdd:PRK09393 222 PLIDWMRAHLAEPHTVASLAARAAMSPRTFLRRFEAATGMTPAEWLLRERLARARDLLESSALSIDQIAERAGFGSEESL 301
|
90
....*....|....*.
gi 501535815 88 SREFKKRFSLSPREYR 103
Cdd:PRK09393 302 RHHFRRRAATSPAAYR 317
|
|
| PRK10371 |
PRK10371 |
transcriptional regulator MelR; |
8-103 |
3.65e-03 |
|
transcriptional regulator MelR;
Pssm-ID: 182416 [Multi-domain] Cd Length: 302 Bit Score: 38.26 E-value: 3.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 8 KMLAWLEDNIYCNPSIDDLAQYMGYSRRFVYEVFYQYGQLPIGQYIRLRRLTIAAVSLRLTRQPIAAIAWQLSYDSPQTF 87
Cdd:PRK10371 195 QMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRF 274
|
90
....*....|....*.
gi 501535815 88 SREFKKRFSLSPREYR 103
Cdd:PRK10371 275 YSTFGKYVGMSPQQYR 290
|
|
| PRK10296 |
PRK10296 |
DNA-binding transcriptional regulator ChbR; Provisional |
44-103 |
4.99e-03 |
|
DNA-binding transcriptional regulator ChbR; Provisional
Pssm-ID: 182362 [Multi-domain] Cd Length: 278 Bit Score: 37.81 E-value: 4.99e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 501535815 44 YGQLPiGQYIRLRRLTIAAVSLRLTRQPIAAIAWQLSYDSPQTFSREFKKRFSLSPREYR 103
Cdd:PRK10296 213 YGKTP-MQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPGSYR 271
|
|
| |
