MULTISPECIES: lipopolysaccharide 1,6-galactosyltransferase [Photorhabdus]
Protein Classification
glycosyltransferase( domain architecture ID 11484524)
group 1 glycosyltransferase (GT1) such as lipopolysaccharide 1,6-galactosyl-transferase, which adds a galactose goup to a glucose group of LPS
List of domain hits
| Name | Accession | Description | Interval | E-value | ||||||
| PRK09922 | PRK09922 | lipopolysaccharide 1,6-galactosyltransferase; |
4-357 | 0e+00 | ||||||
lipopolysaccharide 1,6-galactosyltransferase; : Pssm-ID: 182148 [Multi-domain] Cd Length: 359 Bit Score: 545.46 E-value: 0e+00
|
||||||||||
| Name | Accession | Description | Interval | E-value | ||||||
| PRK09922 | PRK09922 | lipopolysaccharide 1,6-galactosyltransferase; |
4-357 | 0e+00 | ||||||
lipopolysaccharide 1,6-galactosyltransferase; Pssm-ID: 182148 [Multi-domain] Cd Length: 359 Bit Score: 545.46 E-value: 0e+00
|
||||||||||
| GT4_GT28_WabH-like | cd03811 | family 4 and family 28 glycosyltransferases similar to Klebsiella WabH; This family is most ... |
3-330 | 1.32e-47 | ||||||
family 4 and family 28 glycosyltransferases similar to Klebsiella WabH; This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Pssm-ID: 340839 [Multi-domain] Cd Length: 351 Bit Score: 164.45 E-value: 1.32e-47
|
||||||||||
| Glycos_transf_1 | pfam00534 | Glycosyl transferases group 1; Mutations in this domain of Swiss:P37287 lead to disease ... |
183-339 | 2.77e-25 | ||||||
Glycosyl transferases group 1; Mutations in this domain of Swiss:P37287 lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Pssm-ID: 425737 [Multi-domain] Cd Length: 158 Bit Score: 99.66 E-value: 2.77e-25
|
||||||||||
| RfaB | COG0438 | Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ... |
261-323 | 1.88e-08 | ||||||
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; Pssm-ID: 440207 [Multi-domain] Cd Length: 123 Bit Score: 52.30 E-value: 1.88e-08
|
||||||||||
| Name | Accession | Description | Interval | E-value | ||||||
| PRK09922 | PRK09922 | lipopolysaccharide 1,6-galactosyltransferase; |
4-357 | 0e+00 | ||||||
lipopolysaccharide 1,6-galactosyltransferase; Pssm-ID: 182148 [Multi-domain] Cd Length: 359 Bit Score: 545.46 E-value: 0e+00
|
||||||||||
| GT4_GT28_WabH-like | cd03811 | family 4 and family 28 glycosyltransferases similar to Klebsiella WabH; This family is most ... |
3-330 | 1.32e-47 | ||||||
family 4 and family 28 glycosyltransferases similar to Klebsiella WabH; This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Pssm-ID: 340839 [Multi-domain] Cd Length: 351 Bit Score: 164.45 E-value: 1.32e-47
|
||||||||||
| GT4_AmsD-like | cd03820 | amylovoran biosynthesis glycosyltransferase AmsD and similar proteins; This family is most ... |
3-343 | 4.08e-42 | ||||||
amylovoran biosynthesis glycosyltransferase AmsD and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Pssm-ID: 340847 [Multi-domain] Cd Length: 351 Bit Score: 150.08 E-value: 4.08e-42
|
||||||||||
| GT4_CapM-like | cd03808 | capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins; This ... |
76-328 | 9.32e-27 | ||||||
capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. CapM in Staphylococcus aureus is required for the synthesis of type 1 capsular polysaccharides. Pssm-ID: 340837 [Multi-domain] Cd Length: 358 Bit Score: 108.84 E-value: 9.32e-27
|
||||||||||
| Glycos_transf_1 | pfam00534 | Glycosyl transferases group 1; Mutations in this domain of Swiss:P37287 lead to disease ... |
183-339 | 2.77e-25 | ||||||
Glycosyl transferases group 1; Mutations in this domain of Swiss:P37287 lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Pssm-ID: 425737 [Multi-domain] Cd Length: 158 Bit Score: 99.66 E-value: 2.77e-25
|
||||||||||
| GT4_PimA-like | cd03801 | phosphatidyl-myo-inositol mannosyltransferase; This family is most closely related to the GT4 ... |
3-323 | 5.53e-22 | ||||||
phosphatidyl-myo-inositol mannosyltransferase; This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Pssm-ID: 340831 [Multi-domain] Cd Length: 366 Bit Score: 95.68 E-value: 5.53e-22
|
||||||||||
| Glyco_trans_1_4 | pfam13692 | Glycosyl transferases group 1; |
183-323 | 1.33e-19 | ||||||
Glycosyl transferases group 1; Pssm-ID: 463957 [Multi-domain] Cd Length: 138 Bit Score: 83.71 E-value: 1.33e-19
|
||||||||||
| Glycosyltransferase_GTB-type | cd01635 | glycosyltransferase family 1 and related proteins with GTB topology; Glycosyltransferases ... |
180-306 | 9.79e-17 | ||||||
glycosyltransferase family 1 and related proteins with GTB topology; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Pssm-ID: 340816 [Multi-domain] Cd Length: 235 Bit Score: 78.60 E-value: 9.79e-17
|
||||||||||
| GT4_GtfA-like | cd04949 | accessory Sec system glycosyltransferase GtfA and similar proteins; This family is most ... |
183-343 | 1.46e-16 | ||||||
accessory Sec system glycosyltransferase GtfA and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Pssm-ID: 340855 [Multi-domain] Cd Length: 328 Bit Score: 79.27 E-value: 1.46e-16
|
||||||||||
| GT4_WlbH-like | cd03798 | Bordetella parapertussis WlbH and similar proteins; This family is most closely related to the ... |
141-323 | 8.68e-15 | ||||||
Bordetella parapertussis WlbH and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. Staphylococcus aureus CapJ may be involved in capsule polysaccharide biosynthesis. WlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Pssm-ID: 340828 [Multi-domain] Cd Length: 376 Bit Score: 74.72 E-value: 8.68e-15
|
||||||||||
| GT4_UGDG-like | cd03817 | UDP-Glc:1,2-diacylglycerol 3-a-glucosyltransferase and similar proteins; This family is most ... |
140-343 | 3.07e-14 | ||||||
UDP-Glc:1,2-diacylglycerol 3-a-glucosyltransferase and similar proteins; This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (EC 2.4.1.337, UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Pssm-ID: 340844 [Multi-domain] Cd Length: 372 Bit Score: 73.08 E-value: 3.07e-14
|
||||||||||
| GT4_MtfB-like | cd03809 | glycosyltransferases MtfB, WbpX, and similar proteins; This family is most closely related to ... |
15-289 | 1.71e-12 | ||||||
glycosyltransferases MtfB, WbpX, and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. MtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Pssm-ID: 340838 [Multi-domain] Cd Length: 362 Bit Score: 67.77 E-value: 1.71e-12
|
||||||||||
| GT4_ExpE7-like | cd03823 | glycosyltransferase ExpE7 and similar proteins; This family is most closely related to the GT4 ... |
3-323 | 1.24e-11 | ||||||
glycosyltransferase ExpE7 and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Pssm-ID: 340850 [Multi-domain] Cd Length: 357 Bit Score: 65.04 E-value: 1.24e-11
|
||||||||||
| GT4_Bme6-like | cd03821 | Brucella melitensis Bme6 and similar proteins; This family is most closely related to the GT4 ... |
134-303 | 4.07e-09 | ||||||
Brucella melitensis Bme6 and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Pssm-ID: 340848 [Multi-domain] Cd Length: 377 Bit Score: 57.38 E-value: 4.07e-09
|
||||||||||
| RfaB | COG0438 | Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ... |
261-323 | 1.88e-08 | ||||||
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; Pssm-ID: 440207 [Multi-domain] Cd Length: 123 Bit Score: 52.30 E-value: 1.88e-08
|
||||||||||
| GT4_WavL-like | cd03819 | Vibrio cholerae WavL and similar sequences; This family is most closely related to the GT4 ... |
137-289 | 2.11e-08 | ||||||
Vibrio cholerae WavL and similar sequences; This family is most closely related to the GT4 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Pssm-ID: 340846 [Multi-domain] Cd Length: 345 Bit Score: 55.05 E-value: 2.11e-08
|
||||||||||
| GT4_WbnK-like | cd03807 | Shigella dysenteriae WbnK and similar proteins; This family is most closely related to the GT4 ... |
143-333 | 4.92e-08 | ||||||
Shigella dysenteriae WbnK and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Pssm-ID: 340836 [Multi-domain] Cd Length: 362 Bit Score: 54.25 E-value: 4.92e-08
|
||||||||||
| GT4_WbdM_like | cd04951 | LPS/UnPP-GlcNAc-Gal a-1,4-glucosyltransferase WbdM and similar proteins; This family is most ... |
184-289 | 1.28e-06 | ||||||
LPS/UnPP-GlcNAc-Gal a-1,4-glucosyltransferase WbdM and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Pssm-ID: 340857 [Multi-domain] Cd Length: 360 Bit Score: 49.75 E-value: 1.28e-06
|
||||||||||
| GT4_CapH-like | cd03812 | capsular polysaccharide biosynthesis glycosyltransferase CapH and similar proteins; This ... |
138-289 | 2.48e-06 | ||||||
capsular polysaccharide biosynthesis glycosyltransferase CapH and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). Pssm-ID: 340840 [Multi-domain] Cd Length: 357 Bit Score: 48.82 E-value: 2.48e-06
|
||||||||||
| GT4_AmsK-like | cd03799 | Erwinia amylovora AmsK and similar proteins; This is a family of GT4 glycosyltransferases ... |
205-327 | 1.19e-05 | ||||||
Erwinia amylovora AmsK and similar proteins; This is a family of GT4 glycosyltransferases found specifically in certain bacteria. AmsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Pssm-ID: 340829 [Multi-domain] Cd Length: 350 Bit Score: 46.67 E-value: 1.19e-05
|
||||||||||
| GT4_WbuB-like | cd03794 | Escherichia coli WbuB and similar proteins; This family is most closely related to the GT1 ... |
137-250 | 2.34e-05 | ||||||
Escherichia coli WbuB and similar proteins; This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Pssm-ID: 340825 [Multi-domain] Cd Length: 391 Bit Score: 45.80 E-value: 2.34e-05
|
||||||||||
| GT4_BshA-like | cd04962 | N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA and similar proteins; This family is most ... |
214-324 | 4.87e-05 | ||||||
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA and similar proteins; This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Pssm-ID: 340859 [Multi-domain] Cd Length: 370 Bit Score: 44.65 E-value: 4.87e-05
|
||||||||||
| GT4-like | cd05844 | glycosyltransferase family 4 proteins; Glycosyltransferases catalyze the transfer of sugar ... |
141-319 | 9.92e-05 | ||||||
glycosyltransferase family 4 proteins; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to glycosyltransferase family 4 (GT4). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Pssm-ID: 340860 [Multi-domain] Cd Length: 365 Bit Score: 43.98 E-value: 9.92e-05
|
||||||||||
| Glyco_transf_4 | pfam13439 | Glycosyltransferase Family 4; |
17-168 | 2.28e-04 | ||||||
Glycosyltransferase Family 4; Pssm-ID: 463877 [Multi-domain] Cd Length: 169 Bit Score: 41.36 E-value: 2.28e-04
|
||||||||||
| GT4-like | cd03813 | glycosyltransferase family 4 proteins; This family is most closely related to the GT4 family ... |
221-289 | 1.57e-03 | ||||||
glycosyltransferase family 4 proteins; This family is most closely related to the GT4 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Pssm-ID: 340841 [Multi-domain] Cd Length: 474 Bit Score: 40.40 E-value: 1.57e-03
|
||||||||||
| GT4_WfcD-like | cd03795 | Escherichia coli alpha-1,3-mannosyltransferase WfcD and similar proteins; This family is most ... |
184-328 | 2.52e-03 | ||||||
Escherichia coli alpha-1,3-mannosyltransferase WfcD and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Pssm-ID: 340826 [Multi-domain] Cd Length: 355 Bit Score: 39.57 E-value: 2.52e-03
|
||||||||||
| Blast search parameters | ||||
|
