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Conserved domains on  [gi|502671297|ref|WP_012907122|]
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SepZ/EspZ family type III secretion system protein [Citrobacter rodentium]

Protein Classification

SepZ/EspZ family type III secretion system protein( domain architecture ID 10532797)

SepZ/EspZ family type III secretion system protein is a LEE (enterocyte effacement locus)-encoded translocated effector protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SepZ pfam06066
SepZ; SepZ is a component of the type III secretion system use in bacteria. SepZ is a gene ...
 1-100 8.81e-35

SepZ; SepZ is a component of the type III secretion system use in bacteria. SepZ is a gene within the enterocyte effacement locus. SepZ mutants exhibit reduced invasion efficiency and lack of tyrosine phosphorylation of Hp90.


:

Pssm-ID: 368729  Cd Length: 99  Bit Score: 114.58  E-value: 8.81e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502671297    1 MEPTNLSPSGVVLPLATAINGNGPVDENTGVMQAEGGASRNVRVFAGVALAVSALAATGAGIAAMCIDNSSQtEKLGLGI 80
Cdd:pfam06066   1 MEAANLSPSGAVLPLATTINGNNPVDENTGVMQPENGTNRTVRVIAGVALATTALAALGAGIAAACSENSSQ-EYLGLGI 79

                          90       100
                  ....*....|....*....|
gi 502671297   81 AAGVLGGLTSVGGALAMKYA 100
Cdd:pfam06066  80 AAGVLGGLTAVGGALAMKYA 99
 
Name Accession Description Interval E-value
SepZ pfam06066
SepZ; SepZ is a component of the type III secretion system use in bacteria. SepZ is a gene ...
 1-100 8.81e-35

SepZ; SepZ is a component of the type III secretion system use in bacteria. SepZ is a gene within the enterocyte effacement locus. SepZ mutants exhibit reduced invasion efficiency and lack of tyrosine phosphorylation of Hp90.


Pssm-ID: 368729  Cd Length: 99  Bit Score: 114.58  E-value: 8.81e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502671297    1 MEPTNLSPSGVVLPLATAINGNGPVDENTGVMQAEGGASRNVRVFAGVALAVSALAATGAGIAAMCIDNSSQtEKLGLGI 80
Cdd:pfam06066   1 MEAANLSPSGAVLPLATTINGNNPVDENTGVMQPENGTNRTVRVIAGVALATTALAALGAGIAAACSENSSQ-EYLGLGI 79

                          90       100
                  ....*....|....*....|
gi 502671297   81 AAGVLGGLTSVGGALAMKYA 100
Cdd:pfam06066  80 AAGVLGGLTAVGGALAMKYA 99
 
Name Accession Description Interval E-value
SepZ pfam06066
SepZ; SepZ is a component of the type III secretion system use in bacteria. SepZ is a gene ...
 1-100 8.81e-35

SepZ; SepZ is a component of the type III secretion system use in bacteria. SepZ is a gene within the enterocyte effacement locus. SepZ mutants exhibit reduced invasion efficiency and lack of tyrosine phosphorylation of Hp90.


Pssm-ID: 368729  Cd Length: 99  Bit Score: 114.58  E-value: 8.81e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502671297    1 MEPTNLSPSGVVLPLATAINGNGPVDENTGVMQAEGGASRNVRVFAGVALAVSALAATGAGIAAMCIDNSSQtEKLGLGI 80
Cdd:pfam06066   1 MEAANLSPSGAVLPLATTINGNNPVDENTGVMQPENGTNRTVRVIAGVALATTALAALGAGIAAACSENSSQ-EYLGLGI 79

                          90       100
                  ....*....|....*....|
gi 502671297   81 AAGVLGGLTSVGGALAMKYA 100
Cdd:pfam06066  80 AAGVLGGLTAVGGALAMKYA 99
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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