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Conserved domains on  [gi|502785050|ref|WP_013020026|]
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GPGG-motif small membrane protein [Stackebrandtia nassauensis]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
membrane_GPGG NF040511
GPGG-motif small membrane protein; Members of this family are small membrane proteins, nearly ...
 1-47 3.15e-12

GPGG-motif small membrane protein; Members of this family are small membrane proteins, nearly all between 47 and 49 residues in length and very well conserved.


:

Pssm-ID: 439729  Cd Length: 47  Bit Score: 53.74  E-value: 3.15e-12
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*..
gi 502785050  1 MELILWIIAVILVVAGIFQLFKGKLLWGIVLIIVGLLVGPGGVSIFT 47
Cdd:NF040511  1 MATILWIIAVILVIAGIVALVRGQLLWGIVLIVVGLLVGPGGVSIFT 47
 
Name Accession Description Interval E-value
membrane_GPGG NF040511
GPGG-motif small membrane protein; Members of this family are small membrane proteins, nearly ...
 1-47 3.15e-12

GPGG-motif small membrane protein; Members of this family are small membrane proteins, nearly all between 47 and 49 residues in length and very well conserved.


Pssm-ID: 439729  Cd Length: 47  Bit Score: 53.74  E-value: 3.15e-12
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*..
gi 502785050  1 MELILWIIAVILVVAGIFQLFKGKLLWGIVLIIVGLLVGPGGVSIFT 47
Cdd:NF040511  1 MATILWIIAVILVIAGIVALVRGQLLWGIVLIVVGLLVGPGGVSIFT 47
 
Name Accession Description Interval E-value
membrane_GPGG NF040511
GPGG-motif small membrane protein; Members of this family are small membrane proteins, nearly ...
 1-47 3.15e-12

GPGG-motif small membrane protein; Members of this family are small membrane proteins, nearly all between 47 and 49 residues in length and very well conserved.


Pssm-ID: 439729  Cd Length: 47  Bit Score: 53.74  E-value: 3.15e-12
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*..
gi 502785050  1 MELILWIIAVILVVAGIFQLFKGKLLWGIVLIIVGLLVGPGGVSIFT 47
Cdd:NF040511  1 MATILWIIAVILVIAGIVALVRGQLLWGIVLIVVGLLVGPGGVSIFT 47
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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