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Conserved domains on  [gi|502792031|ref|WP_013027007|]
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MULTISPECIES: phage tail assembly protein [Pantoea]

Protein Classification

phage tail assembly protein( domain architecture ID 10562347)

phage tail assembly protein similar to Escherichia virus P2 tail assembly protein E (gpE), which promotes tail assembly by creating a scaffold for the tail tube proteins

Gene Ontology:  GO:0098003

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Phage_TAC_7 pfam10109
Phage tail assembly chaperone proteins, E, or 41 or 14; This is family of various Myoviridae ...
 10-87 3.92e-12

Phage tail assembly chaperone proteins, E, or 41 or 14; This is family of various Myoviridae bacteriophage tail assembly chaperone, or TAC, proteins.


:

Pssm-ID: 431061  Cd Length: 79  Bit Score: 56.58  E-value: 3.92e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502792031   10 VTLDTPIKRGKTEIKTIVLRKPQSGALRGVRLQaLMEMDVN----AVMAVLPRVSTpaLTAQEINEMDPADLVALSVEVV 85
Cdd:pfam10109   1 ITLAKPIEVGGKTYTELTLREPTVGDLRAAQVK-GGKPDVDalmgAEIALIARLSG--LPPEDLEQLDPADYARLQEYVA 77


                  ..
gi 502792031   86 TF 87
Cdd:pfam10109  78 GF 79
 
Name Accession Description Interval E-value
Phage_TAC_7 pfam10109
Phage tail assembly chaperone proteins, E, or 41 or 14; This is family of various Myoviridae ...
 10-87 3.92e-12

Phage tail assembly chaperone proteins, E, or 41 or 14; This is family of various Myoviridae bacteriophage tail assembly chaperone, or TAC, proteins.


Pssm-ID: 431061  Cd Length: 79  Bit Score: 56.58  E-value: 3.92e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502792031   10 VTLDTPIKRGKTEIKTIVLRKPQSGALRGVRLQaLMEMDVN----AVMAVLPRVSTpaLTAQEINEMDPADLVALSVEVV 85
Cdd:pfam10109   1 ITLAKPIEVGGKTYTELTLREPTVGDLRAAQVK-GGKPDVDalmgAEIALIARLSG--LPPEDLEQLDPADYARLQEYVA 77


                  ..
gi 502792031   86 TF 87
Cdd:pfam10109  78 GF 79
 
Name Accession Description Interval E-value
Phage_TAC_7 pfam10109
Phage tail assembly chaperone proteins, E, or 41 or 14; This is family of various Myoviridae ...
 10-87 3.92e-12

Phage tail assembly chaperone proteins, E, or 41 or 14; This is family of various Myoviridae bacteriophage tail assembly chaperone, or TAC, proteins.


Pssm-ID: 431061  Cd Length: 79  Bit Score: 56.58  E-value: 3.92e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502792031   10 VTLDTPIKRGKTEIKTIVLRKPQSGALRGVRLQaLMEMDVN----AVMAVLPRVSTpaLTAQEINEMDPADLVALSVEVV 85
Cdd:pfam10109   1 ITLAKPIEVGGKTYTELTLREPTVGDLRAAQVK-GGKPDVDalmgAEIALIARLSG--LPPEDLEQLDPADYARLQEYVA 77


                  ..
gi 502792031   86 TF 87
Cdd:pfam10109  78 GF 79
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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