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Conserved domains on  [gi|502849794|ref|WP_013084770|]
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MULTISPECIES: isoprenyl transferase [Priestia]

Protein Classification

undecaprenyl diphosphate synthase family protein( domain architecture ID 10794083)

undecaprenyl diphosphate synthase (UPPS) family protein catalyzes consecutive condensation reactions of farnesyl diphosphate (FPP) with specific numbers of isopentenyl diphosphate (IPP) to form long-chain polyprenyl diphosphates, similar to UPPS that catalyzes chain elongation of FPP by eight IPP to form the carrier lipid UPP in bacterial cell wall peptidoglycan biosynthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK14830 PRK14830
undecaprenyl pyrophosphate synthase; Provisional
 1-260 3.13e-170

undecaprenyl pyrophosphate synthase; Provisional


:

Pssm-ID: 184840  Cd Length: 251  Bit Score: 469.74  E-value: 3.13e-170
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794   1 MLRKFQAWKKSqdlntlslsERKDQVKQHPVPEHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLT 80
Cdd:PRK14830   1 MFKFFKKKKKT---------SFDEELDKGNIPKHIAIIMDGNGRWAKKRMLPRIAGHKAGMDTVKKITKAASELGVKVLT 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  81 LYAFSTENWKRPKIEVEFLMKLPEEFLTTFLPELIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYG 160
Cdd:PRK14830  72 LYAFSTENWKRPKDEVKFLMNLPVEFLDKFVPELIENNVKVNVIGDTDRLPEHTLRALEKAIEKTKNNTGLILNFALNYG 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 161 SRHEIMGAIQSLVEDVEQGKVASSSISENLFSSYLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKE 240
Cdd:PRK14830 152 GRAEIVSAVKEIAKDVLDGKLNPEDITEELISNYLMTKGLPDPDLLIRTSGELRLSNFLLWQLAYSEFYFTDVLWPDFDE 231

                        250       260
                 ....*....|....*....|
gi 502849794 241 NHLIEAVEAFQKRGRRFGGV 260
Cdd:PRK14830 232 EELLKAIKDYQSRQRRFGGV 251
 
Name Accession Description Interval E-value
PRK14830 PRK14830
undecaprenyl pyrophosphate synthase; Provisional
 1-260 3.13e-170

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 184840  Cd Length: 251  Bit Score: 469.74  E-value: 3.13e-170
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794   1 MLRKFQAWKKSqdlntlslsERKDQVKQHPVPEHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLT 80
Cdd:PRK14830   1 MFKFFKKKKKT---------SFDEELDKGNIPKHIAIIMDGNGRWAKKRMLPRIAGHKAGMDTVKKITKAASELGVKVLT 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  81 LYAFSTENWKRPKIEVEFLMKLPEEFLTTFLPELIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYG 160
Cdd:PRK14830  72 LYAFSTENWKRPKDEVKFLMNLPVEFLDKFVPELIENNVKVNVIGDTDRLPEHTLRALEKAIEKTKNNTGLILNFALNYG 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 161 SRHEIMGAIQSLVEDVEQGKVASSSISENLFSSYLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKE 240
Cdd:PRK14830 152 GRAEIVSAVKEIAKDVLDGKLNPEDITEELISNYLMTKGLPDPDLLIRTSGELRLSNFLLWQLAYSEFYFTDVLWPDFDE 231

                        250       260
                 ....*....|....*....|
gi 502849794 241 NHLIEAVEAFQKRGRRFGGV 260
Cdd:PRK14830 232 EELLKAIKDYQSRQRRFGGV 251
UppS COG0020
Undecaprenyl pyrophosphate synthase [Lipid transport and metabolism];
17-260 2.94e-154

Undecaprenyl pyrophosphate synthase [Lipid transport and metabolism];


Pssm-ID: 439791  Cd Length: 248  Bit Score: 429.09  E-value: 2.94e-154
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  17 LSLSERKDQVKQHPVPEHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEV 96
Cdd:COG0020    1 LYERALLPEIDPGNLPRHVAIIMDGNGRWAKKRGLPRIEGHRAGVEAVREVVEACAELGIKYLTLYAFSTENWKRPKEEV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  97 EFLMKLPEEFLTTFLPELIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVEDV 176
Cdd:COG0020   81 SFLMGLLREYLRRELDELHKNNVRVRVIGDRSRLPESLQEAIEEAEELTKNNTGLTLNIALNYGGRWEIVDAVRKIARDV 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 177 EQGKVASSSISENLFSSYLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRR 256
Cdd:COG0020  161 AAGELDPEDIDEETISRYLYTADLPDPDLLIRTSGEQRISNFLLWQLAYAELYFTDVLWPDFDKEDLLRAIRDYQRRERR 240


                 ....
gi 502849794 257 FGGV 260
Cdd:COG0020  241 FGGT 244
Cis_IPPS cd00475
Cis (Z)-Isoprenyl Diphosphate Synthases; Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS) ...
 34-252 7.92e-137

Cis (Z)-Isoprenyl Diphosphate Synthases; Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS) catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl diphosphates. A few can also catalyze the condensation of IPP to trans-geranyl diphosphate to form the short-chain cis,trans- FPP. In prokaryotes, the cis-IPPS, undecaprenyl diphosphate synthase (UPP synthase), catalyzes the formation of the carrier lipid UPP in bacterial cell wall peptidoglycan biosynthesis. Similarly, in eukaryotes, the cis-IPPS, dehydrodolichyl diphosphate (dedol-PP) synthase catalyzes the formation of the polyisoprenoid glycosyl carrier lipid dolichyl monophosphate. cis-IPPS form homodimers and are mechanistically and structurally distinct from trans-IPPS, which lack the DDXXD motifs, yet require Mg2+ for activity.


Pssm-ID: 259850  Cd Length: 219  Bit Score: 384.03  E-value: 7.92e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  34 HIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKLPEEFLTTFLPE 113
Cdd:cd00475    1 HVAIIMDGNRRWAKKRGLPRTEGHRAGAEALREILEWCLELGIKYLTLYAFSTENWKRPKEEVDALMKLLREYLEKELEE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 114 LIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVEDVEQGKVASSSISENLFSS 193
Cdd:cd00475   81 LHKNGVRLRVIGDLSLLPEDLREAIEEAEEATKNNTGLTLNIALNYGGRDEIVRAVRKIARDVKAGELDPEDITEELISK 160

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 502849794 194 YLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQK 252
Cdd:cd00475  161 HLYTADLPDPDLLIRTSGEQRLSNFLLWQSAYAELYFTDVLWPDFRKEDLLRAILDYQR 219
Prenyltransf pfam01255
Putative undecaprenyl diphosphate synthase; Previously known as uncharacterized protein family ...
 38-258 1.98e-134

Putative undecaprenyl diphosphate synthase; Previously known as uncharacterized protein family UPF0015, a single member of this family has been identified as an undecaprenyl diphosphate synthase.


Pssm-ID: 460138  Cd Length: 220  Bit Score: 377.86  E-value: 1.98e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794   38 IMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKLP-EEFLTTFLPELIE 116
Cdd:pfam01255   1 IMDGNRRWAKKRGLPREAGHRAGAEALREVLEWCLELGIKYLTLYAFSTENWKRPKEEVDALMELLkEEYLRRELPELHK 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  117 KNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVEDVEqgKVASSSISENLFSSYLM 196
Cdd:pfam01255  81 NGVRVRVIGDLSLLPEDLQEAIEEAEEATKNNTGLTLNIALNYGGRDEIVDAVRKIVKEGK--KLDPEDIDEELISSHLY 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 502849794  197 SKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFG 258
Cdd:pfam01255 159 TAGLPDPDLLIRTSGEQRLSNFLLWQSAYSELYFTDVLWPDFRKEDLLRAIRDYQRRERRFG 220
uppS TIGR00055
undecaprenyl diphosphate synthase; This enzyme builds undecaprenyl diphosphate, a molecule ...
 33-258 2.61e-91

undecaprenyl diphosphate synthase; This enzyme builds undecaprenyl diphosphate, a molecule that in bacteria is used a carrier in synthesizing cell wall components. Alternate name: undecaprenyl pyrophosphate synthetase. Activity has been demonstrated experimentally for members of this family from Micrococcus luteus, E. coli, Haemophilus influenzae, and Streptococcus pneumoniae. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]


Pssm-ID: 129165  Cd Length: 226  Bit Score: 268.89  E-value: 2.61e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794   33 EHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKLPEEFLTTFLP 112
Cdd:TIGR00055   1 RHVAIIMDGNGRWAKKKGKPRAYGHKAGVKSLRRILRWCANLGVECLTLYAFSTENWKRPKEEVDFLMELFEKKLDREVK 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  113 ELIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVEDVEQGKVASSSISENLFS 192
Cdd:TIGR00055  81 ELHRYNVRIRIIGDLSLLSKELQEKIKKAEEDTKNNTDFTLNIAFNYGGRNEILHAVKQIAEKVKSGKLLPEDIDEETLN 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 502849794  193 SYLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFG 258
Cdd:TIGR00055 161 KHLYTANLPPVDLLIRTSGEMRISNFLLWQSSYAELYFTDILWPDFDPQDFELAILDFQFRHRRFG 226
 
Name Accession Description Interval E-value
PRK14830 PRK14830
undecaprenyl pyrophosphate synthase; Provisional
 1-260 3.13e-170

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 184840  Cd Length: 251  Bit Score: 469.74  E-value: 3.13e-170
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794   1 MLRKFQAWKKSqdlntlslsERKDQVKQHPVPEHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLT 80
Cdd:PRK14830   1 MFKFFKKKKKT---------SFDEELDKGNIPKHIAIIMDGNGRWAKKRMLPRIAGHKAGMDTVKKITKAASELGVKVLT 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  81 LYAFSTENWKRPKIEVEFLMKLPEEFLTTFLPELIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYG 160
Cdd:PRK14830  72 LYAFSTENWKRPKDEVKFLMNLPVEFLDKFVPELIENNVKVNVIGDTDRLPEHTLRALEKAIEKTKNNTGLILNFALNYG 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 161 SRHEIMGAIQSLVEDVEQGKVASSSISENLFSSYLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKE 240
Cdd:PRK14830 152 GRAEIVSAVKEIAKDVLDGKLNPEDITEELISNYLMTKGLPDPDLLIRTSGELRLSNFLLWQLAYSEFYFTDVLWPDFDE 231

                        250       260
                 ....*....|....*....|
gi 502849794 241 NHLIEAVEAFQKRGRRFGGV 260
Cdd:PRK14830 232 EELLKAIKDYQSRQRRFGGV 251
UppS COG0020
Undecaprenyl pyrophosphate synthase [Lipid transport and metabolism];
17-260 2.94e-154

Undecaprenyl pyrophosphate synthase [Lipid transport and metabolism];


Pssm-ID: 439791  Cd Length: 248  Bit Score: 429.09  E-value: 2.94e-154
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  17 LSLSERKDQVKQHPVPEHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEV 96
Cdd:COG0020    1 LYERALLPEIDPGNLPRHVAIIMDGNGRWAKKRGLPRIEGHRAGVEAVREVVEACAELGIKYLTLYAFSTENWKRPKEEV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  97 EFLMKLPEEFLTTFLPELIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVEDV 176
Cdd:COG0020   81 SFLMGLLREYLRRELDELHKNNVRVRVIGDRSRLPESLQEAIEEAEELTKNNTGLTLNIALNYGGRWEIVDAVRKIARDV 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 177 EQGKVASSSISENLFSSYLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRR 256
Cdd:COG0020  161 AAGELDPEDIDEETISRYLYTADLPDPDLLIRTSGEQRISNFLLWQLAYAELYFTDVLWPDFDKEDLLRAIRDYQRRERR 240


                 ....
gi 502849794 257 FGGV 260
Cdd:COG0020  241 FGGT 244
Cis_IPPS cd00475
Cis (Z)-Isoprenyl Diphosphate Synthases; Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS) ...
 34-252 7.92e-137

Cis (Z)-Isoprenyl Diphosphate Synthases; Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS) catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl diphosphates. A few can also catalyze the condensation of IPP to trans-geranyl diphosphate to form the short-chain cis,trans- FPP. In prokaryotes, the cis-IPPS, undecaprenyl diphosphate synthase (UPP synthase), catalyzes the formation of the carrier lipid UPP in bacterial cell wall peptidoglycan biosynthesis. Similarly, in eukaryotes, the cis-IPPS, dehydrodolichyl diphosphate (dedol-PP) synthase catalyzes the formation of the polyisoprenoid glycosyl carrier lipid dolichyl monophosphate. cis-IPPS form homodimers and are mechanistically and structurally distinct from trans-IPPS, which lack the DDXXD motifs, yet require Mg2+ for activity.


Pssm-ID: 259850  Cd Length: 219  Bit Score: 384.03  E-value: 7.92e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  34 HIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKLPEEFLTTFLPE 113
Cdd:cd00475    1 HVAIIMDGNRRWAKKRGLPRTEGHRAGAEALREILEWCLELGIKYLTLYAFSTENWKRPKEEVDALMKLLREYLEKELEE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 114 LIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVEDVEQGKVASSSISENLFSS 193
Cdd:cd00475   81 LHKNGVRLRVIGDLSLLPEDLREAIEEAEEATKNNTGLTLNIALNYGGRDEIVRAVRKIARDVKAGELDPEDITEELISK 160

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 502849794 194 YLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQK 252
Cdd:cd00475  161 HLYTADLPDPDLLIRTSGEQRLSNFLLWQSAYAELYFTDVLWPDFRKEDLLRAILDYQR 219
Prenyltransf pfam01255
Putative undecaprenyl diphosphate synthase; Previously known as uncharacterized protein family ...
 38-258 1.98e-134

Putative undecaprenyl diphosphate synthase; Previously known as uncharacterized protein family UPF0015, a single member of this family has been identified as an undecaprenyl diphosphate synthase.


Pssm-ID: 460138  Cd Length: 220  Bit Score: 377.86  E-value: 1.98e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794   38 IMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKLP-EEFLTTFLPELIE 116
Cdd:pfam01255   1 IMDGNRRWAKKRGLPREAGHRAGAEALREVLEWCLELGIKYLTLYAFSTENWKRPKEEVDALMELLkEEYLRRELPELHK 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  117 KNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVEDVEqgKVASSSISENLFSSYLM 196
Cdd:pfam01255  81 NGVRVRVIGDLSLLPEDLQEAIEEAEEATKNNTGLTLNIALNYGGRDEIVDAVRKIVKEGK--KLDPEDIDEELISSHLY 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 502849794  197 SKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFG 258
Cdd:pfam01255 159 TAGLPDPDLLIRTSGEQRLSNFLLWQSAYSELYFTDVLWPDFRKEDLLRAIRDYQRRERRFG 220
PRK14831 PRK14831
undecaprenyl pyrophosphate synthase; Provisional
 31-260 7.37e-106

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 184841  Cd Length: 249  Bit Score: 306.87  E-value: 7.37e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  31 VPEHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKLPEEFLTTF 110
Cdd:PRK14831  20 LPKHVAVIMDGNGRWAKRRGLPRIMGHRRGVDALKDLLRCCKDWGIGALTAYAFSTENWSRPLEEVNFLMTLFERVLRRE 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 111 LPELIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVEDVEQGKVASSSISENL 190
Cdd:PRK14831 100 LEELMEENVRIRFVGDLDPLPKSLQEEISRSTELTKNNNGIHFNVCTNYGGRQEIVQAARAIAQQVQQGELDPSEIDENL 179

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 191 FSSYLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFGGV 260
Cdd:PRK14831 180 FESELYTAGIKDPDLLIRTSGEMRISNFLLWQLAYAEIYVTDVLWPDFDRDEFHKALLDYQSRERRFGGV 249
PRK14836 PRK14836
undecaprenyl pyrophosphate synthase; Provisional
 29-258 4.00e-105

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 237831  Cd Length: 253  Bit Score: 305.07  E-value: 4.00e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  29 HPVPEHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKLpeeFLT 108
Cdd:PRK14836  12 ENIPRHIAIIMDGNGRWAKRRGKPRVEGHRAGVRAVRRTIEFCLEKGIEMLTLFAFSSENWLRPADEVSALMEL---FLK 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 109 TF---LPELIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVEDVEQGKVASSS 185
Cdd:PRK14836  89 ALdreVDKLHRNGIRVRFIGDRSRLSPKLQERMEYAERLTASNTRLILSLAVSYGGRWDIVTAARALAREVAAGKLAPDE 168

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 502849794 186 ISENLFSSYLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFG 258
Cdd:PRK14836 169 IDEALLAQHLALADLPEPDLFIRTSGELRISNFLLWQLAYTELYFTDTLWPDFDAQELQQALEDYASRERRFG 241
PRK14834 PRK14834
isoprenyl transferase;
31-260 5.62e-99

isoprenyl transferase;


Pssm-ID: 237829  Cd Length: 249  Bit Score: 289.35  E-value: 5.62e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  31 VPEHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKLPEEFLTTF 110
Cdd:PRK14834  14 VPRHVAIIMDGNGRWAKARGLPRAAGHRAGVEALRRVVRAAGELGIGYLTLFAFSSENWSRPASEVSDLFGLLRLFIRRD 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 111 LPELIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVEDVEQGKVASSSISENL 190
Cdd:PRK14834  94 LAELHRNGVRVRVIGERAGLEADICALLNEAEELTRNNTGLNLVIAFNYGSRDEIARAVRRLAREVAEGRLDPASIDAET 173

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 191 FSSYLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFGGV 260
Cdd:PRK14834 174 ISANLDTADIPDPDLIIRTSGEQRLSNFLLWQAAYSELLFVPIHWPDFDKAALEAAIEEYARRERRFGGL 243
uppS TIGR00055
undecaprenyl diphosphate synthase; This enzyme builds undecaprenyl diphosphate, a molecule ...
 33-258 2.61e-91

undecaprenyl diphosphate synthase; This enzyme builds undecaprenyl diphosphate, a molecule that in bacteria is used a carrier in synthesizing cell wall components. Alternate name: undecaprenyl pyrophosphate synthetase. Activity has been demonstrated experimentally for members of this family from Micrococcus luteus, E. coli, Haemophilus influenzae, and Streptococcus pneumoniae. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]


Pssm-ID: 129165  Cd Length: 226  Bit Score: 268.89  E-value: 2.61e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794   33 EHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKLPEEFLTTFLP 112
Cdd:TIGR00055   1 RHVAIIMDGNGRWAKKKGKPRAYGHKAGVKSLRRILRWCANLGVECLTLYAFSTENWKRPKEEVDFLMELFEKKLDREVK 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  113 ELIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVEDVEQGKVASSSISENLFS 192
Cdd:TIGR00055  81 ELHRYNVRIRIIGDLSLLSKELQEKIKKAEEDTKNNTDFTLNIAFNYGGRNEILHAVKQIAEKVKSGKLLPEDIDEETLN 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 502849794  193 SYLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFG 258
Cdd:TIGR00055 161 KHLYTANLPPVDLLIRTSGEMRISNFLLWQSSYAELYFTDILWPDFDPQDFELAILDFQFRHRRFG 226
PRK14832 PRK14832
undecaprenyl pyrophosphate synthase; Provisional
 31-260 3.01e-88

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 237827  Cd Length: 253  Bit Score: 262.24  E-value: 3.01e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  31 VPEHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKLPEEFLTTF 110
Cdd:PRK14832  18 IPQHIAVIMDGNGRWATSQGLPRIAGHRQGARTLKELLRCCKDWGIKALTAYAFSTENWQRPIEEVDFLMLLFERLLRRE 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 111 LPELIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVEDVEQGKVASSSISENL 190
Cdd:PRK14832  98 LAQMHREGVRISFIGDLSALPKSLQTEMERSMTETLNNQAIHFTVAVNYGSRNEITRACRQVAELVQQGKLSADAVNEQL 177

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 191 FSSYLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFGGV 260
Cdd:PRK14832 178 VEQHLYTADTPPPDLLIRTSGEMRLSNFLLWQMAYTEMYFTDILWPDFDRAAFHQALLSYQKRDRRFGQV 247
PRK14833 PRK14833
di-trans,poly-cis-decaprenylcistransferase;
32-260 7.90e-86

di-trans,poly-cis-decaprenylcistransferase;


Pssm-ID: 237828  Cd Length: 233  Bit Score: 255.51  E-value: 7.90e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  32 PEHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKLPEEFLTTFL 111
Cdd:PRK14833   5 LKHLAIIMDGNGRWAKLRGKARAAGHKKGVKTLREITIWCANHKLECLTLYAFSTENWKRPKSEVDFLMKLLKKYLKDER 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 112 PELIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVEDvEQGKVASSSISENLF 191
Cdd:PRK14833  85 STYLENNIRFKAIGDLEGFSKELRDTILQLEEDTRSFKGFTQVLALNYGSKDEISRAFKKLLES-PPSHIGELESLEEEI 163

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 502849794 192 SSYLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFGGV 260
Cdd:PRK14833 164 SNCLDTADLPEVDLLIRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGGL 232
PRK14840 PRK14840
undecaprenyl pyrophosphate synthase; Provisional
 30-258 6.71e-83

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 173301  Cd Length: 250  Bit Score: 248.61  E-value: 6.71e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  30 PVPEHIAIIMDGNGRWAQK----RALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKLPEE 105
Cdd:PRK14840  17 SLPRHVAIIMDGNRRWYRKheqfCQKRAISGHYYGAKSLPQIVDTALHLGIEVLTLFAFSTENFSRSKEEVAELFSLFNS 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 106 FLTTFLPELIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVEDVEQGKVASSS 185
Cdd:PRK14840  97 QLDSQLPYLHENEIRLRCIGDLSKLPQELQNNIEQASSATAHYSRMELVLAINYGGKDELVRAFKKLHQDLANKKISSDD 176

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 502849794 186 ISENLFSSYLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFG 258
Cdd:PRK14840 177 ISEELISSYLDTSGLPDPDLLIRTGGEMRVSNFLLWQIAYTELYVTDVLWPDFTPNDLLEAIKTYQQRSRRGG 249
PRK14838 PRK14838
isoprenyl transferase;
23-258 2.83e-82

isoprenyl transferase;


Pssm-ID: 184846  Cd Length: 242  Bit Score: 246.71  E-value: 2.83e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  23 KDQVKQHPVPEHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKL 102
Cdd:PRK14838   2 KEQIDMNRIPQHIAIIMDGNGRWAKERGKERSFGHQAGAETVHIITEEAARLGVKFLTLYTFSTENWNRPSDEVAALMSL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 103 peeFLTTFLPELIEKN-VQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVEDVEQGKV 181
Cdd:PRK14838  82 ---LLDSIEEETFMKNnIRFRIIGDIAKLPEEVQERLNECEEHTAKNTGMCLVLALSYSSRWEITEATRQIATLVQNGEL 158

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 502849794 182 ASSSISENLFSSYLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFG 258
Cdd:PRK14838 159 NPEEITEESISEHLTTNFMPDPDLLIRTGGEIRLSNYLLWQCAYSELYFCDTFWPDFDEEELCKAIYDYQKRERRFG 235
PRK14841 PRK14841
undecaprenyl pyrophosphate synthase; Provisional
 31-260 5.35e-80

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 173302  Cd Length: 233  Bit Score: 240.66  E-value: 5.35e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  31 VPEHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKLPEEFLTTF 110
Cdd:PRK14841   3 IPQHVAIIMDGNGRWAKKRGLPRIKGHQRGAEVLHNTVKWSLELGIKYLTAFSFSTENWKRPKEEVEFLMDLFVQMIDRE 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 111 LPELIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVEDVEQGKvaSSSISENL 190
Cdd:PRK14841  83 MELLRRERVRVRILGRKEGLPEKVLKKWQEVEEKTKEFDRMTLVIAFNYGGRREILDAVESILKDVSQGK--KIELTEET 160

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 191 FSSYLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFGGV 260
Cdd:PRK14841 161 FRQYLYLPDVPDPDLIIRTSGEMRLSNFLLWQSAYSELYFFKKLWPDFTKRDFLRAIESYSKRERRFGGL 230
PRK14829 PRK14829
undecaprenyl pyrophosphate synthase; Provisional
 25-260 1.06e-77

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 237826  Cd Length: 243  Bit Score: 235.06  E-value: 1.06e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  25 QVKQHPVPEHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKLPE 104
Cdd:PRK14829   8 DIPKNKLPRHIAVVMDGNGRWATQRGLKRTEGHKAGEPVLFDVVAGAIEAGVPYLSLYTFSTENWKRSPDEVRFLMGFSR 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 105 EFLTTFLPELIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVEDVEQGKVASS 184
Cdd:PRK14829  88 DVIHRRREQMDEWGVRVRWSGRRPRLWKSVIDELEAAEELTKNNTTMDLVFCVNYGGRAEIADAAAAIAREVRDGKISGD 167

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 502849794 185 SISENLFSSYLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFGGV 260
Cdd:PRK14829 168 RVTEKMISDHLYNPDMPDVDLFLRTSGEQRTSNFLLWQSAYAELDFVPKLFPDFGRDDLWAAIDEYAHRDRRFGGV 243
PRK14842 PRK14842
undecaprenyl pyrophosphate synthase; Provisional
 31-260 2.39e-74

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 173303  Cd Length: 241  Bit Score: 226.41  E-value: 2.39e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  31 VPEHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKLPEEFLTTF 110
Cdd:PRK14842   8 IPAHIAVIMDGNGRWAESQGKKRSEGHREGANAIDRLMDASLEYGLKNISLYAFSTENWKRPITEIRSIFGLLVEFIETR 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 111 LPELIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVEDVEQGKVA-SSSISEN 189
Cdd:PRK14842  88 LDTIHARGIRIHHSGSRKKLTRTVLDKIDFAMAKTKKNKNLTVNFCLNYGSHDELLRAAQEVFLARKAKKVTlEKPLKEK 167

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 502849794 190 LFSSYLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFGGV 260
Cdd:PRK14842 168 EFEKFLYTSPLPPVDLLIRTAGEQRLSNFLLWQSAYAELYFTDTLWPDFDKNSLVDSLKWYETRTRKFGGL 238
PRK14827 PRK14827
undecaprenyl pyrophosphate synthase; Provisional
 31-258 1.81e-71

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 173288  Cd Length: 296  Bit Score: 220.98  E-value: 1.81e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  31 VPEHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKLPEEFLTTF 110
Cdd:PRK14827  67 LPNHVAIVMDGNGRWATQRGLARTEGHKMGEAVVIDIACGAIELGIKWLSLYAFSTENWKRSPEEVRFLMGFNRDVVRRR 146

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 111 LPELIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVEDVEQGKVASSSISENL 190
Cdd:PRK14827 147 RDNLNKMGVRIRWVGSRPRLWRSVINELAIAEEMTKSNDVITINYCVNYGGRTEITEATREIAREAAAGRLNPERITEST 226

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 502849794 191 FSSYLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFG 258
Cdd:PRK14827 227 IARHLQRPDIPDVDLFLRTSGEQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACEEYASRNRRFG 294
PRK14839 PRK14839
di-trans,poly-cis-decaprenylcistransferase;
34-260 8.27e-71

di-trans,poly-cis-decaprenylcistransferase;


Pssm-ID: 237832  Cd Length: 239  Bit Score: 217.32  E-value: 8.27e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  34 HIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKLPEEFLTTFLPE 113
Cdd:PRK14839  12 HVAIIMDGNGRWATARGLPRLAGHRAGVEAIRRVVEAAPDLGIGTLTLYAFSSDNWRRPAAEVGGLMRLLRAYLRNETER 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 114 LIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSlvedveqgKVASSSISENLFSS 193
Cdd:PRK14839  92 LARNGVRLTVIGRRDRLPDGIPEAIARAEAATAGGDRLHLRIAVDYSARDAILAAAAK--------ALGPEGLSREAFSD 163

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 502849794 194 yLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFGGV 260
Cdd:PRK14839 164 -LLTGDGGDVDLLIRTGGEKRLSDFLLWESAYAELHFTDRMWPDFGADDLAAAVADFHGRERRFGGL 229
PRK10240 PRK10240
(2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase;
39-259 1.04e-69

(2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase;


Pssm-ID: 182326  Cd Length: 229  Bit Score: 214.46  E-value: 1.04e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  39 MDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKLPEEFLTTFLPELIEKN 118
Cdd:PRK10240   1 MDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHN 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 119 VQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVEDVEQGKVASSSISENLFSSYLMSK 198
Cdd:PRK10240  81 VRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEQVQQGNLQPDQIDEEMLNQHICMH 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 502849794 199 SLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFGG 259
Cdd:PRK10240 161 ELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGG 221
PRK14837 PRK14837
undecaprenyl pyrophosphate synthase; Provisional
 31-258 1.30e-65

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 173298  Cd Length: 230  Bit Score: 203.90  E-value: 1.30e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  31 VPEHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKLPEEFLTTF 110
Cdd:PRK14837   6 LPSHVGIIMDGNRRWALKKGLSFFEGHKEGLKRAKEIVKHSLKLGIKYLSLYVFSTENWNRTDSEIEHLMFLIADYLSSE 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 111 LPELIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVE---DVEqgkvassSIS 187
Cdd:PRK14837  86 FNFYKKNNIKIIVSGDIESLSEEVKKSIKDAISFTKNFDGLVLNLAINYGGRNEIVRAVKKFLSsglDLE-------TLN 158

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 502849794 188 ENLFSSYLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFG 258
Cdd:PRK14837 159 ENVFSKFLDNPELPDLDLLIRTGGDMRISNFLLWRIAYCEFIFSNVLWPEYYVNHYSKDLECFKNRKRNFG 229
PRK14835 PRK14835
isoprenyl transferase;
25-258 3.86e-64

isoprenyl transferase;


Pssm-ID: 237830  Cd Length: 275  Bit Score: 201.61  E-value: 3.86e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  25 QVKQHPVPEHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKLPE 104
Cdd:PRK14835  35 EVKHGKLPRHLGLILDGNRRFARALGLQREMGHEFGVQKAYEVLEWCLELGIPTVTIWVFSTDNFSRSPAEVETLMNLFE 114

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 105 EFLTTFL--PELIEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVEDVEQGKVA 182
Cdd:PRK14835 115 REARRMAvdPRIHANRVRVRAIGRHDGFPPKVLEALEELEERTEGHEGMLLNIAVGYGGREEIVDAVKSLLLEAAATGKS 194

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 183 SSSISENL----FSSYLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFG 258
Cdd:PRK14835 195 PEEVAAELtpehISAHLYTAGVPDPDFIIRTSGEIRLSGFLLWQSAYSEYYFCDVYWPGFRKVDFLRALRDYQGRERRFG 274
PRK14828 PRK14828
undecaprenyl pyrophosphate synthase; Provisional
 30-259 2.39e-63

undecaprenyl pyrophosphate synthase; Provisional


Pssm-ID: 237825  Cd Length: 256  Bit Score: 198.82  E-value: 2.39e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  30 PVPEHIAIIMDGNGRWAQKRALPRMM-GHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKLPEEFLT 108
Cdd:PRK14828  25 QVPGHVGIIVDGNRRWARKAGFTDVSqGHRAGAAKIGEFLGWCDETDVNVVTLYLLSTDNLGRPSEELNPLLDIIEDVVR 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 109 TFLPElieKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHEIMGAIQSLVED--VEQGKVA--SS 184
Cdd:PRK14828 105 QLAPD---GRWRVRHVGSLDLLPAPSANRLKEAEEATVGNDGIKVNVAVGYGGRQEIVDAVRSLLTEhkDKGTSIDelAE 181

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 502849794 185 SISENLFSSYLMSKSLPDPDLLIRTSGELRLSNFMLWQLAYTEFWFTEVLWPDFKENHLIEAVEAFQKRGRRFGG 259
Cdd:PRK14828 182 SVTVDAISTHLYTGGQPDPDLVIRTSGEQRLSGFMLWQSAHSEYYFCETYWPAFRKVDFLRALRDYSQRERRFGK 256
PTZ00349 PTZ00349
dehydrodolichyl diphosphate synthetase; Provisional
 33-238 5.90e-27

dehydrodolichyl diphosphate synthetase; Provisional


Pssm-ID: 185571  Cd Length: 322  Bit Score: 106.23  E-value: 5.90e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794  33 EHIAIIMDGNGRWAQKRALPRMMGHHEGMKVVRHVTRSANELGVKVLTLYAFSTENWKRPKIEVEFLMKL------PEEF 106
Cdd:PTZ00349  21 KHISIIMDGNRRFAKEKGLHSAIGHFMGSKALIQIIEICIKLKIKILSVFSFSLLNYNRSPEEIHFLFYLnlliliNEDF 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 107 LTTFLPeliEKNVQVRIMGDKSELPAHTIRAVDNAIEKTKHNTGLILNFALNYGSRHE---------------------- 164
Cdd:PTZ00349 101 FFKFIK---DNKIKIKIIGNLSYINDAYRKIIHDIEEKTENFDNILLNIFFSYTSRNEmslckfnpnlyfdtyknlleek 177

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502849794 165 -IMGAIQSLVEDVEQGKVASSSISENL---------------------------------------FSSYLMSKSLPDPD 204
Cdd:PTZ00349 178 kILCGSNILTDPIKEGTFAIPDDEDECdyldheleneridldlkfdgdcicgeksflneeqieivnYHKKLLTSDLPPPN 257

                        250       260       270
                 ....*....|....*....|....*....|....*
gi 502849794 205 LLIRTSGELRLSNFMLWQLA-YTEFWFTEVLWPDF 238
Cdd:PTZ00349 258 ILIRTSGEKRLSDFMLYQISeFTEIYFINEYWPIF 292
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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