|
Name |
Accession |
Description |
Interval |
E-value |
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
139-679 |
6.02e-112 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 348.30 E-value: 6.02e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 139 RFVIGSLITIVALIGIFIVWPSIAIFIPMFTNDAGEFAplafmNVLSQAHIIQVIINSIMLSIAVGIGCTFFGLVLAIYT 218
Cdd:COG1178 7 RRPRLLLLLLALLLALLVLLPLLALLLRAFTDGLANFW-----ALLSDPYLWRALGNTLLLALLVTLLSLLLGVPLAWLL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 219 TRIAKRSAIIGRIFSILPIVTPPFVVGLGVTLMMGRSGYITELMVDWFGLTNTNwLYGFTGIWLAQVLAFTPMAFMILDG 298
Cdd:COG1178 82 ARTDFPGRRLLRWLLLLPLALPPYVVALAWIALFGPNGLLNTLLRALFGLEPPD-IYGLGGIILVLVLFNYPYVYLLLRA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 299 AIKTIHPSLEEASYTLRASRWQTFNGVFVPLLKPALANAFLIVVVQSLADFSNPLVLGGNFDVLATQIYFYITGsQLDYQ 378
Cdd:COG1178 161 ALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPLVLGGGYTTLTTAIYQAWLG-DFDLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 379 AASTLGAFLLLFSLLVFCIQYMWIGKRSYVTVSGKSYRGDVQPLPVTLVWSVIALLAVWIAFNALLYGSIFYGSFTVnwG 458
Cdd:COG1178 240 AAAALALVLLLLVLLLLLLERRLRRRRRYATVGGRARRPRRVKLGRWRWLALALCLLLVLLGLLLPLLALLLWSLTK--A 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 459 VDYTLTLDNFIKLFGQGmsdGAWPSLLDTLLYAGIAAPITAAFGLLIAWVVVRQQFRGKKTIEFTTMLCFAVPGTVAGVS 538
Cdd:COG1178 318 LDDNLTLDNYRFVLLDP---SLLRALLNSLLLALLAALLAVLLALLLAYLVRRRRGRLARLLDRLAMLPYAVPGIVLGLG 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 539 YILAFNS-APVYLTGTAAIVIISMVMRNVPVGIRAGIAGLGQIDKSLDEASLSLRAGSLRTITHILLPLLRPAILSALIY 617
Cdd:COG1178 395 LLLLFNRpLPLLLYGTLAILVLAYVVRFLPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALL 474
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 502860812 618 SFVRAITTVSAIVFLVTPDTRVATAYILNRVEDGEYGVAIAYGSILIVVMLAIIFLFDWLIG 679
Cdd:COG1178 475 VFVTSMKELSATLLLRPPGFETLAVLIYQLASSGRYGEAAALALLLVLVSLLPVLLLERLLG 536
|
|
| PhnU2 |
TIGR03262 |
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ... |
143-677 |
3.74e-59 |
|
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 274495 [Multi-domain] Cd Length: 546 Bit Score: 208.77 E-value: 3.74e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 143 GSLITIVALIGIFIVWPSIAIFIPMFTNDAGEFAPLA-FMNVLSQAHIIQVIINSIMLSIAVGIGCTF--FGLVLAIYTT 219
Cdd:TIGR03262 5 LLLAGMILALLLFLLLPLLALLTKSVYDSDGDFIGLAnFAEYFATPGLLQSLGNSLTVSAIVTAIVVPlaFAFAYALTRS 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 220 RIAKRSAIigRIFSILPIVTPPFVVGLGVTLMMGRSGYITElmvdWFGLTNtnwLYGFTGIWLAQVLAFTPMAFMILDGA 299
Cdd:TIGR03262 85 RIPGKGAF--RLVALLPLLAPSLLPAISLIYLFGNQGLLKG----LLGGFS---IYGFWGIVIGEVFYTFPHALMILVTA 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 300 IKTIHPSLEEASYTLRASRWQTFNGVFVPLLKPALANAFLIVVVQSLADFSNPLVLGGNFDVLATQIYFYITGSQLDYQA 379
Cdd:TIGR03262 156 LSLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDFGVPKVIGGDYNVLATDIYKQVIGQQNFPMG 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 380 ASTlgAFLLLFSLLVFCIQYMWIGKRSYVTVSGKSYRGDVQPLPVTLVWSVIALLAVWIAFNALLyGSIFYGSFTVNWGV 459
Cdd:TIGR03262 236 AVV--GVLLLLPALLAFGIDRAIQRRQRAQLSSRSVPYQPKPNRVRDAACLVYCAIISAALLAVV-GMAVYASLVKFWPY 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 460 DYTLTLDNFikLFGQgMSDGAWPSLLDTLLYAGIAAPITAAFGLLIAWVVVRQQFRGK--KTIEFTTMLCFAVPGTVAGV 537
Cdd:TIGR03262 313 NLSLTLKHY--NFDL-MDGGGWEAYKNSLRLAATTALIGTILVFGGAYLIEKTRGFGLlrGVLRFLAILPMAVPGLVLGL 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 538 SYILAFNSA--PV-YLTGTAAIVIISMVMRNVPVGIRAGIAGLGQIDKSLDEASLSLRAGSLRTITHILLPLLRPAILSA 614
Cdd:TIGR03262 390 GYIFFFNAPtnPLnGLYGTMALLVLCTVVHFYTVSHLTAVTALKQIDSEFEAVSASLKVPFYKTFLRVTLPVCLPAILDI 469
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 502860812 615 LIYSFVRAITTVSAIVFLVTPDTRVATAYILNRVEDGEYGVAIAYGSILIVVMLAIIFLFDWL 677
Cdd:TIGR03262 470 ARYLFVNSMTTVSAVVFLYSPDTKLASVAILNMDDAGDIAPAAAMATLIVLTSAVAKLLFALA 532
|
|
| cysT |
CHL00187 |
sulfate transport protein; Provisional |
487-632 |
6.62e-16 |
|
sulfate transport protein; Provisional
Pssm-ID: 214388 [Multi-domain] Cd Length: 237 Bit Score: 77.75 E-value: 6.62e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 487 TLLYAGIAAPITAAFGLLIAWVVVRQQFRGKKTIEFTTMLCFAVPGTVAGVsyILA------------FNSAPVYLTGTA 554
Cdd:CHL00187 60 TLSMALIAALINGFFGLLIAWVLVRYNFPGKRLLDAAVDLPFALPTSVAGL--TLAtvygdngwighlLSHLGIQIVFTK 137
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 502860812 555 AIVIISMVMRNVPVGIRAGIAGLGQIDKSLDEASLSLRAGSLRTITHILLPLLRPAILSALIYSFVRAITTVSAIVFL 632
Cdd:CHL00187 138 LGVLLAMIFVSFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAIGEYGSIVII 215
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
484-671 |
6.33e-13 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 67.69 E-value: 6.33e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 484 LLDTLLYAGIAAPITAAFGLLIAWVVVRQQFRGKKTIEFTTMLCFAVPGTVAGVSYILAFNSA---PVYLTGTAAIVIIS 560
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLlgwGILPGLGLPALILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 561 MVMRnVPVGIRAGIAGLGQIDKSLDEASLSLRAGSLRTITHILLPLLRPAILSALIYSFVRAITTVSAIVFLVTPDTRVA 640
Cdd:cd06261 81 LLLI-APFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGP 159
|
170 180 190
....*....|....*....|....*....|.
gi 502860812 641 TAYILNRVEDGEYGVAIAYGSILIVVMLAII 671
Cdd:cd06261 160 GTGLLLIFAILFPGDLGVAAAVALILLLLSL 190
|
|
| ABC_perm1 |
NF038017 |
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ... |
487-664 |
2.34e-06 |
|
ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.
Pssm-ID: 411610 [Multi-domain] Cd Length: 184 Bit Score: 48.31 E-value: 2.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 487 TLLYAGIAAPITAAFGLLIAWVVVRQQFRGKKTIEFTTMLCFAVPGTVAG-VSYILAFNSAPV---YLTGTAAIVIISMV 562
Cdd:NF038017 1 SLRVSGTATLIAALIGIPLGALLALRRFPGRRLVISLLNTLMGLPPVVVGlIVYLLLSRSGPLgflGLLYTPTAMIIAQA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 563 MRNVPVGIRAGIAGLGQIDKSLDEASLSLRAGSLRTIThILLPLLRPAILSALIYSFVRAITTVSAIVFL---VTPDTRV 639
Cdd:NF038017 81 VLALPIVAGLTLAAVQGLDPELRLQILSLGATRWQALW-TLLKEARFALLAAVLAGFGRAISEVGAVMMVggnIRGYTRV 159
|
170 180
....*....|....*....|....*
gi 502860812 640 ATAYILNRVEDGEYGVAIAYGSILI 664
Cdd:NF038017 160 LTTAIVLETSKGNFDLALALGIILL 184
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
514-677 |
3.96e-04 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 41.90 E-value: 3.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 514 FRGKKTIEFTTMLCFAVPGTVAGVSYILAFNSAPVYLTGTAAIVIIsmVMRNVPVGIRAGIAGLGQIDKSLDEASLSLRA 593
Cdd:pfam00528 14 RRLDRLLRPLIDLLQALPSFVLAILLVVIAILSILGHGILPAIILA--LLGWAGYARLIRRAALRSLPSDLVEAARALGA 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 594 GSLRTITHILLPLLRPAILSALIYSFVRAITTVSAI--VFLVTPDTRVATAYILNRVEDGEYGVAIAYGSILIVVMLAII 671
Cdd:pfam00528 92 SRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLefLGSWPGLGLLLIEAILGYDYPEIQGPVLAAALILLLLNLLVD 171
|
....*.
gi 502860812 672 FLFDWL 677
Cdd:pfam00528 172 ILQRLL 177
|
|
| ABC_perm1 |
NF038017 |
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ... |
200-322 |
1.20e-03 |
|
ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.
Pssm-ID: 411610 [Multi-domain] Cd Length: 184 Bit Score: 40.61 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 200 SIAVGIGCTFFGLVLAI------YTTRIAKRSAIIGRIFSILPIvtPPFVVGLGVTLMMGRSGYITELmvdwfgltntNW 273
Cdd:NF038017 1 SLRVSGTATLIAALIGIplgallALRRFPGRRLVISLLNTLMGL--PPVVVGLIVYLLLSRSGPLGFL----------GL 68
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 502860812 274 LYGFTGIWLAQVLAFTPMAFMILDGAIKTIHPSLEEASYTLRASRWQTF 322
Cdd:NF038017 69 LYTPTAMIIAQAVLALPIVAGLTLAAVQGLDPELRLQILSLGATRWQAL 117
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
139-679 |
6.02e-112 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 348.30 E-value: 6.02e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 139 RFVIGSLITIVALIGIFIVWPSIAIFIPMFTNDAGEFAplafmNVLSQAHIIQVIINSIMLSIAVGIGCTFFGLVLAIYT 218
Cdd:COG1178 7 RRPRLLLLLLALLLALLVLLPLLALLLRAFTDGLANFW-----ALLSDPYLWRALGNTLLLALLVTLLSLLLGVPLAWLL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 219 TRIAKRSAIIGRIFSILPIVTPPFVVGLGVTLMMGRSGYITELMVDWFGLTNTNwLYGFTGIWLAQVLAFTPMAFMILDG 298
Cdd:COG1178 82 ARTDFPGRRLLRWLLLLPLALPPYVVALAWIALFGPNGLLNTLLRALFGLEPPD-IYGLGGIILVLVLFNYPYVYLLLRA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 299 AIKTIHPSLEEASYTLRASRWQTFNGVFVPLLKPALANAFLIVVVQSLADFSNPLVLGGNFDVLATQIYFYITGsQLDYQ 378
Cdd:COG1178 161 ALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPLVLGGGYTTLTTAIYQAWLG-DFDLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 379 AASTLGAFLLLFSLLVFCIQYMWIGKRSYVTVSGKSYRGDVQPLPVTLVWSVIALLAVWIAFNALLYGSIFYGSFTVnwG 458
Cdd:COG1178 240 AAAALALVLLLLVLLLLLLERRLRRRRRYATVGGRARRPRRVKLGRWRWLALALCLLLVLLGLLLPLLALLLWSLTK--A 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 459 VDYTLTLDNFIKLFGQGmsdGAWPSLLDTLLYAGIAAPITAAFGLLIAWVVVRQQFRGKKTIEFTTMLCFAVPGTVAGVS 538
Cdd:COG1178 318 LDDNLTLDNYRFVLLDP---SLLRALLNSLLLALLAALLAVLLALLLAYLVRRRRGRLARLLDRLAMLPYAVPGIVLGLG 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 539 YILAFNS-APVYLTGTAAIVIISMVMRNVPVGIRAGIAGLGQIDKSLDEASLSLRAGSLRTITHILLPLLRPAILSALIY 617
Cdd:COG1178 395 LLLLFNRpLPLLLYGTLAILVLAYVVRFLPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALL 474
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 502860812 618 SFVRAITTVSAIVFLVTPDTRVATAYILNRVEDGEYGVAIAYGSILIVVMLAIIFLFDWLIG 679
Cdd:COG1178 475 VFVTSMKELSATLLLRPPGFETLAVLIYQLASSGRYGEAAALALLLVLVSLLPVLLLERLLG 536
|
|
| PhnU2 |
TIGR03262 |
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ... |
143-677 |
3.74e-59 |
|
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 274495 [Multi-domain] Cd Length: 546 Bit Score: 208.77 E-value: 3.74e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 143 GSLITIVALIGIFIVWPSIAIFIPMFTNDAGEFAPLA-FMNVLSQAHIIQVIINSIMLSIAVGIGCTF--FGLVLAIYTT 219
Cdd:TIGR03262 5 LLLAGMILALLLFLLLPLLALLTKSVYDSDGDFIGLAnFAEYFATPGLLQSLGNSLTVSAIVTAIVVPlaFAFAYALTRS 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 220 RIAKRSAIigRIFSILPIVTPPFVVGLGVTLMMGRSGYITElmvdWFGLTNtnwLYGFTGIWLAQVLAFTPMAFMILDGA 299
Cdd:TIGR03262 85 RIPGKGAF--RLVALLPLLAPSLLPAISLIYLFGNQGLLKG----LLGGFS---IYGFWGIVIGEVFYTFPHALMILVTA 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 300 IKTIHPSLEEASYTLRASRWQTFNGVFVPLLKPALANAFLIVVVQSLADFSNPLVLGGNFDVLATQIYFYITGSQLDYQA 379
Cdd:TIGR03262 156 LSLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDFGVPKVIGGDYNVLATDIYKQVIGQQNFPMG 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 380 ASTlgAFLLLFSLLVFCIQYMWIGKRSYVTVSGKSYRGDVQPLPVTLVWSVIALLAVWIAFNALLyGSIFYGSFTVNWGV 459
Cdd:TIGR03262 236 AVV--GVLLLLPALLAFGIDRAIQRRQRAQLSSRSVPYQPKPNRVRDAACLVYCAIISAALLAVV-GMAVYASLVKFWPY 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 460 DYTLTLDNFikLFGQgMSDGAWPSLLDTLLYAGIAAPITAAFGLLIAWVVVRQQFRGK--KTIEFTTMLCFAVPGTVAGV 537
Cdd:TIGR03262 313 NLSLTLKHY--NFDL-MDGGGWEAYKNSLRLAATTALIGTILVFGGAYLIEKTRGFGLlrGVLRFLAILPMAVPGLVLGL 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 538 SYILAFNSA--PV-YLTGTAAIVIISMVMRNVPVGIRAGIAGLGQIDKSLDEASLSLRAGSLRTITHILLPLLRPAILSA 614
Cdd:TIGR03262 390 GYIFFFNAPtnPLnGLYGTMALLVLCTVVHFYTVSHLTAVTALKQIDSEFEAVSASLKVPFYKTFLRVTLPVCLPAILDI 469
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 502860812 615 LIYSFVRAITTVSAIVFLVTPDTRVATAYILNRVEDGEYGVAIAYGSILIVVMLAIIFLFDWL 677
Cdd:TIGR03262 470 ARYLFVNSMTTVSAVVFLYSPDTKLASVAILNMDDAGDIAPAAAMATLIVLTSAVAKLLFALA 532
|
|
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
431-685 |
3.37e-30 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 119.83 E-value: 3.37e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 431 IALLAVWIAFNALLYGSIFY---GSFTVNWGVDY---TLTLDNFIKLFGqgmSDGAWPSLLDTLLYAGIAAPITAAFGLL 504
Cdd:COG1177 7 LLLRLFLALVLLFLYLPILVlvlYSFNDSWFLTFppeGFTLRWYAELFS---DPRLLDALLNSLLIALLSTLLATVLGTP 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 505 IAWVVVRQQFRGKKTIEFTTMLCFAVPGTVAGVSYILAFNSAPvyLTGTAAIVIISMVMRNVPVGIRAGIAGLGQIDKSL 584
Cdd:COG1177 84 AALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALG--LSGGLWGLILAHVVFTLPFVVLVVLARLQGFDPSL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 585 DEASLSLRAGSLRTITHILLPLLRPAILSALIYSFVRAITTVSAIVFLVTPDTRVATAYILNRVEDGEYGVAIAYGSILI 664
Cdd:COG1177 162 EEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAGPGVTTLPVYIYSMIRRGISPEINALSTLLI 241
|
250 260
....*....|....*....|.
gi 502860812 665 VVMLAIIFLFDWLIGEARISR 685
Cdd:COG1177 242 LLSLLLLLLAERLRRRGERRR 262
|
|
| PotB |
COG1176 |
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ... |
149-382 |
1.37e-25 |
|
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];
Pssm-ID: 440789 [Multi-domain] Cd Length: 287 Bit Score: 107.16 E-value: 1.37e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 149 VALIGIFIVWPSIAIFIPMFTNDAGEFAPL------AFMNVLSQAHIIQVIINSIMLSIAVGIGCTFFGLVLAIYTTRIA 222
Cdd:COG1176 19 LLWLLLFFVLPLLLLLVYSFTTRDPYGGVVpgftleNYARLFTDPLYLKVLLRTLWIALLTTLICLLLGYPIAYFLARAP 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 223 KRSAIIGRIFSILPIVTPPFVVGLGVTLMMGRSGYITELMVdWFGLTNT--NWLYGFTGIWLAQVLAFTPMAFMILDGAI 300
Cdd:COG1176 99 PRWRNLLLLLVILPFWTSFLVRTYAWIVLLGRNGLLNSLLL-ALGLIDEplRLLYTEFAVVIGLVYVYLPFMVLPLYAAL 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 301 KTIHPSLEEASYTLRASRWQTFNGVFVPLLKPALANAFLIVVVQSLADFSNPLVLGG-NFDVLATQIYFYItGSQLDYQA 379
Cdd:COG1176 178 EKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAFVTPALLGGgKVLMIGNLIYQQF-LSALNWPL 256
|
...
gi 502860812 380 AST 382
Cdd:COG1176 257 AAA 259
|
|
| CysU |
COG0555 |
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ... |
462-682 |
2.43e-25 |
|
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440321 [Multi-domain] Cd Length: 268 Bit Score: 105.99 E-value: 2.43e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 462 TLTLDNFIKLFGqgmSDGAWPSLLDTLLYAGIAAPITAAFGLLIAWVVVRQQFRGKKTIEFTTMLCFAVPGTVAGVSYIL 541
Cdd:COG0555 37 GLGWAEFWAVLT---SPRVLAALKLSLGTALIAALINLVFGLPLAWVLVRYRFPGKRLVDALVDLPFALPTAVAGIALLL 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 542 AFNSAPVY----------LTGTAAIVIISMVMRNVPVGIRAGIAGLGQIDKSLDEASLSLRAGSLRTITHILLPLLRPAI 611
Cdd:COG0555 114 LFGPNGWLgqllaplgikVAFTPLGIVLAQTFVSLPFVVRTVQPVLEELDPELEEAAATLGASRWQTFRRVILPLLLPAL 193
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 502860812 612 LSALIYSFVRAITTVSAIVFLV--TPD-TRVATAYILNRVEDGEYGVAIAYGSILIVVMLAIIFLFDWLIGEAR 682
Cdd:COG0555 194 LTGFALAFARALGEFGAVIFIAgnLPMkTEILPLLIYLKLEEGDYAGATAIALVLLLISFLLLLLINLLQRRSR 267
|
|
| PotB |
COG1176 |
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ... |
428-686 |
1.02e-19 |
|
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];
Pssm-ID: 440789 [Multi-domain] Cd Length: 287 Bit Score: 89.82 E-value: 1.02e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 428 WSVIALLAVWIAFNALL-YGSIFYGSFTVN---WGVDYTLTLDNFIKLFGqgmSDGAWPSLLDTLLYAGIAAPITAAFGL 503
Cdd:COG1176 12 LLLLLPALLWLLLFFVLpLLLLLVYSFTTRdpyGGVVPGFTLENYARLFT---DPLYLKVLLRTLWIALLTTLICLLLGY 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 504 LIAWVVVRQQFRGKKTIEFTTMLCFAVP---------------GTVAGVSYILAFNSAPVYLTGTAAIVIISMVMRNVPV 568
Cdd:COG1176 89 PIAYFLARAPPRWRNLLLLLVILPFWTSflvrtyawivllgrnGLLNSLLLALGLIDEPLRLLYTEFAVVIGLVYVYLPF 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 569 GIRAGIAGLGQIDKSLDEASLSLRAGSLRTITHILLPLLRPAILSALIYSFVRAITTVSAIVFLVTPDTRVATAYILNRV 648
Cdd:COG1176 169 MVLPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAFVTPALLGGGKVLMIGNLIYQQF 248
|
250 260 270
....*....|....*....|....*....|....*....
gi 502860812 649 -EDGEYGVAIAYGSILIVVMLAIIFLFDWLIGEARISRS 686
Cdd:COG1176 249 lSALNWPLAAALAVVLLLIVLLVLLLYLRLLRRRRLLGG 287
|
|
| CysU |
COG0555 |
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ... |
144-382 |
3.69e-19 |
|
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440321 [Multi-domain] Cd Length: 268 Bit Score: 87.88 E-value: 3.69e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 144 SLITIVALIGIFIVWPSIAIFIpmftnDAGEFAPLAFMNVLSQAHIIQVIINSIMLSIAVGIGCTFFGLVLAIYTTRIAK 223
Cdd:COG0555 12 TLGLTLLYLSLIVLLPLAALVL-----KAAGLGWAEFWAVLTSPRVLAALKLSLGTALIAALINLVFGLPLAWVLVRYRF 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 224 RSAIIGRIFSILPIVTPPFVVGLGVTLMMGRSGYITElmvdWFGLTNTNWLYGFTGIWLAQVLAFTPMAFMILDGAIKTI 303
Cdd:COG0555 87 PGKRLVDALVDLPFALPTAVAGIALLLLFGPNGWLGQ----LLAPLGIKVAFTPLGIVLAQTFVSLPFVVRTVQPVLEEL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 304 HPSLEEASYTLRASRWQTFNGVFVPLLKPALANAFLIVVVQSLADFSNPLVLGGNFDvLATQI---YFYITGSQLDYQAA 380
Cdd:COG0555 163 DPELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARALGEFGAVIFIAGNLP-MKTEIlplLIYLKLEEGDYAGA 241
|
..
gi 502860812 381 ST 382
Cdd:COG0555 242 TA 243
|
|
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
145-367 |
7.51e-19 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 86.70 E-value: 7.51e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 145 LITIVALIGIFIVWPSIAIFIPMFTNDAGEFAPLA------FMNVLSQAHIIQVIINSIMLSIAVGIGCTFFGLVLAIYT 218
Cdd:COG1177 9 LRLFLALVLLFLYLPILVLVLYSFNDSWFLTFPPEgftlrwYAELFSDPRLLDALLNSLLIALLSTLLATVLGTPAALAL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 219 TRIAKRSAIIGRIFSILPIVTPPFVVGLGVTLMMGRsgyitelmvdwFGLTNtnwlyGFTGIWLAQVLAFTPMAFMILDG 298
Cdd:COG1177 89 ARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSA-----------LGLSG-----GLWGLILAHVVFTLPFVVLVVLA 152
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 299 AIKTIHPSLEEASYTLRASRWQTFNGVFVPLLKPALANAFLIVVVQSLADFSNPLVLGGN-FDVLATQIY 367
Cdd:COG1177 153 RLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAGPgVTTLPVYIY 222
|
|
| UgpA |
COG1175 |
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; |
149-380 |
8.42e-17 |
|
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440788 [Multi-domain] Cd Length: 298 Bit Score: 81.72 E-value: 8.42e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 149 VALIGIFIVWPSIAIFIPMFTN-----DAGEFAPLA-FMNVLSQAHIIQVIINSIMLSIAVGIGCTFFGLVLAIYTTRIA 222
Cdd:COG1175 28 LLLLLVFVLYPLLYTLYLSFTDwnllgPPPEFVGLDnYARLFTDPRFWNALGNTLLFTVVSVPLQLVLGLLLALLLNRKL 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 223 KRSAIIgRIFSILPIVTPPFVVGLGVTLMMGRSGYITELMVDWFGLTNTNWL----YGFTGIWLAQVLAFTPMAFMILDG 298
Cdd:COG1175 108 RGRGFF-RTLFFLPWVISPVVVALIWKWLFNPDYGLLNALLGALGLEPINWLgdpsLALPAVIIVTVWKGTGFNMLIFLA 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 299 AIKTIHPSLEEASYTLRASRWQTFNGVFVPLLKPALANAFLIVVVQSLADFSNPLVL-----GGNFDVLATQIYFY-ITG 372
Cdd:COG1175 187 GLQSIPRELYEAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIGALQVFDLVYVLtgggpGNSTTTLVLYIYQTaFQQ 266
|
....*...
gi 502860812 373 SQLDYQAA 380
Cdd:COG1175 267 FDFGYASA 274
|
|
| cysT |
CHL00187 |
sulfate transport protein; Provisional |
487-632 |
6.62e-16 |
|
sulfate transport protein; Provisional
Pssm-ID: 214388 [Multi-domain] Cd Length: 237 Bit Score: 77.75 E-value: 6.62e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 487 TLLYAGIAAPITAAFGLLIAWVVVRQQFRGKKTIEFTTMLCFAVPGTVAGVsyILA------------FNSAPVYLTGTA 554
Cdd:CHL00187 60 TLSMALIAALINGFFGLLIAWVLVRYNFPGKRLLDAAVDLPFALPTSVAGL--TLAtvygdngwighlLSHLGIQIVFTK 137
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 502860812 555 AIVIISMVMRNVPVGIRAGIAGLGQIDKSLDEASLSLRAGSLRTITHILLPLLRPAILSALIYSFVRAITTVSAIVFL 632
Cdd:CHL00187 138 LGVLLAMIFVSFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAIGEYGSIVII 215
|
|
| PRK10971 |
PRK10971 |
sulfate/thiosulfate ABC transporter permease CysT; |
487-672 |
3.36e-15 |
|
sulfate/thiosulfate ABC transporter permease CysT;
Pssm-ID: 182873 Cd Length: 277 Bit Score: 76.33 E-value: 3.36e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 487 TLLYAGIAAPITAAFGLLIAWVVVRQQFRGKKTIEFTTMLCFAVPGTVAGVSYILAFNSAPVY----------LTGTAAI 556
Cdd:PRK10971 63 TLLSAFVASIFNAVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGWYgewlakfdikVTYTWLG 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 557 VIISMVMRNVPVGIRAGIAGLGQIDKSLDEASLSLRAGSLRTITHILLPLLRPAILSALIYSFVRAITTVSAIVFL---V 633
Cdd:PRK10971 143 IAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIagnI 222
|
170 180 190
....*....|....*....|....*....|....*....
gi 502860812 634 TPDTRVATAYILNRVEDGEYGVAIAYGSILIVVMLAIIF 672
Cdd:PRK10971 223 AWKTEVTSLMIFVRLQEFDYPAASAIASVILAASLLLLF 261
|
|
| UgpA |
COG1175 |
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; |
408-680 |
3.66e-15 |
|
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440788 [Multi-domain] Cd Length: 298 Bit Score: 76.71 E-value: 3.66e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 408 VTVSGKSYRGDVQPLPVTLVWSVIALLAVWIAFnALLYGsiFYGSFTvnwgvDYTLT--------LDNFIKLFGqgmSDG 479
Cdd:COG1175 5 TSAAARRRRRRRRLAAYLFLLPALLLLLVFVLY-PLLYT--LYLSFT-----DWNLLgpppefvgLDNYARLFT---DPR 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 480 AWPSLLDTLLYAGIAAPITAAFGLLIAwVVVRQQFRGKKTIEFTTMLCFAVPGTVAGVSYILAFNS-------------- 545
Cdd:COG1175 74 FWNALGNTLLFTVVSVPLQLVLGLLLA-LLLNRKLRGRGFFRTLFFLPWVISPVVVALIWKWLFNPdygllnallgalgl 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 546 APVYLTGTAAIVIISMVM----RNVPVGIRAGIAGLGQIDKSLDEASLSLRAGSLRTITHILLPLLRPAILSALIYSFVR 621
Cdd:COG1175 153 EPINWLGDPSLALPAVIIvtvwKGTGFNMLIFLAGLQSIPRELYEAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIG 232
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 502860812 622 AItTVSAIVFLVT-----PDTRVATAYILNR-VEDGEYGVAIAYGSILIVVMLAIIFLFDWLIGE 680
Cdd:COG1175 233 AL-QVFDLVYVLTgggpgNSTTTLVLYIYQTaFQQFDFGYASAIAVVLFLIILVLTLLQLRLLRR 296
|
|
| UgpE |
COG0395 |
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ... |
462-674 |
3.87e-14 |
|
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440164 [Multi-domain] Cd Length: 282 Bit Score: 73.21 E-value: 3.87e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 462 TLTLDNFIKLFGQGmsdGAWPSLLDTLLYAGIAAPITAAFGLLIAWVVVRQQFRGKKTIEFTTMLCFAVPGTVAGVSYIL 541
Cdd:COG0395 57 EFTLENYRAAFTDG---PFGRYLLNSLIVAVVSTVLSLLLSSLAAYALARFRFRGRKLLFLLILATLMIPGQVLLIPLYL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 542 AFNSapVYLTGTAAIVIISMVMRNVPVGI---RAGIAGlgqIDKSLDEASLSLRAGSLRTITHILLPLLRPAILSALIYS 618
Cdd:COG0395 134 LFRQ--LGLLNTYWGLILPYLAFGLPFGIfllRQFFRS---IPRELEEAARIDGASEFRIFWRIVLPLSKPALATVAIFT 208
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 502860812 619 FVRAIT-TVSAIVFLVTPDTRVATAYI--LNRVEDGEYGVAIAYGSILIVVMLAIIFLF 674
Cdd:COG0395 209 FIGAWNdFLWPLILLTSPDLRTLPVGLasFQGQYGTDWGLLMAAAVIATLPVLILFLFL 267
|
|
| modB |
PRK09421 |
molybdate ABC transporter permease subunit; |
194-332 |
5.78e-13 |
|
molybdate ABC transporter permease subunit;
Pssm-ID: 181841 Cd Length: 229 Bit Score: 68.79 E-value: 5.78e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 194 INSIMLSIAVGIGCTFFGLVLAIYTTRIAKRSAIIGRIF--SI--LPIVTPPFVVGLGVTLMMGRSGYITELMVDWFGLT 269
Cdd:PRK09421 8 WQAVLLSLKVSSVAVLFSLPFGILVAWLLARCRFPGKSLldSLlhLPLVLPPVVTGYLLLISMGRRGFIGQWLYEWFGIS 87
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 502860812 270 ntnwlygFTGIWLAQVLAFTPMAFMILDGAIK----TIHPSLEEASYTLRASRWQTFNGVFVPLLKP 332
Cdd:PRK09421 88 -------FAFSWRGAALAAAVMAFPLMVRAIRlsleAVDRKLEQAARTLGASPWRVFFTITLPLTLP 147
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
484-671 |
6.33e-13 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 67.69 E-value: 6.33e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 484 LLDTLLYAGIAAPITAAFGLLIAWVVVRQQFRGKKTIEFTTMLCFAVPGTVAGVSYILAFNSA---PVYLTGTAAIVIIS 560
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLlgwGILPGLGLPALILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 561 MVMRnVPVGIRAGIAGLGQIDKSLDEASLSLRAGSLRTITHILLPLLRPAILSALIYSFVRAITTVSAIVFLVTPDTRVA 640
Cdd:cd06261 81 LLLI-APFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGP 159
|
170 180 190
....*....|....*....|....*....|.
gi 502860812 641 TAYILNRVEDGEYGVAIAYGSILIVVMLAII 671
Cdd:cd06261 160 GTGLLLIFAILFPGDLGVAAAVALILLLLSL 190
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
193-380 |
7.00e-12 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 64.61 E-value: 7.00e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 193 IINSIMLSIAVGIGCTFFGLVLAIYTTRIAKRSAIIGRIFSILPIVTPPFVVGLGVTLMMGRsgyitelmvdwFGLTNTN 272
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGV-----------LLGWGIL 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 273 WLYGFTGIWLAQVLaFTPMAFMILDGAIKTIHPSLEEASYTLRASRWQTFNGVFVPLLKPALANAFLIVVVQSLADFSNP 352
Cdd:cd06261 70 PGLGLPALILALLL-IAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALV 148
|
170 180
....*....|....*....|....*...
gi 502860812 353 LVLGGNFDVLATQIYFYITGSQLDYQAA 380
Cdd:cd06261 149 SFLGGGEAPGPGTGLLLIFAILFPGDLG 176
|
|
| 3a0106s02 |
TIGR00969 |
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and ... |
126-382 |
1.85e-11 |
|
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulfate ABC transporter. [Transport and binding proteins, Anions]
Pssm-ID: 273370 Cd Length: 271 Bit Score: 65.07 E-value: 1.85e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 126 TLALTRLEWLGGDRFVIGSLITIVALIgifIVWPSIAIFIPMFTNDAGEFaplafMNVLSQAHIIQVIINSIMLSIAVGI 205
Cdd:TIGR00969 3 ALPSARFRFIKWGKLSLGIALLYVFLI---LILPVAALFVQAFSKGLGQF-----WQNATDPIAVSAYNLTLLMALIAVP 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 206 GCTFFGLVLAIYTTRIAKRSAIIGRIFSILPIVTPPFVVGLGVTLMMGRSGYITElmvdWFGLTNTNWLYGFTGIWLAQV 285
Cdd:TIGR00969 75 LNGVFGLLIAWVLTRYQFPGRKLLDALIDLPFALSPVVAGLTLALLYGSNGWLGS----WLASFGIQIIFTWPGMALAMI 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 286 LAFTPMAFMILDGAIKTIHPSLEEASYTLRASRWQTFNGVFVPLLKPALANAFLIVVVQSLADFSNPLVLGGN--FDVLA 363
Cdd:TIGR00969 151 FVSLPFVVREVQPVLEELGTEAEEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFGAVVVVSGNipGKTLT 230
|
250
....*....|....*....
gi 502860812 364 TQIYFYITGSQLDYQAAST 382
Cdd:TIGR00969 231 LPLLIEERLEQYDYPGAYV 249
|
|
| UgpE |
COG0395 |
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ... |
179-377 |
3.67e-10 |
|
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440164 [Multi-domain] Cd Length: 282 Bit Score: 61.26 E-value: 3.67e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 179 AFMNVLSQAHIIQVIINSIMLSIAVGIGCTFFGL----VLAIYTTRIakRSAIIGRIFSILPIvtpPFVVGLgVTLMmgr 254
Cdd:COG0395 62 NYRAAFTDGPFGRYLLNSLIVAVVSTVLSLLLSSlaayALARFRFRG--RKLLFLLILATLMI---PGQVLL-IPLY--- 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 255 sgyiteLMVDWFGLTNTnwlygFTGIWLAQVLAFTPMAFMILDGAIKTIHPSLEEASYTLRASRWQTFNGVFVPLLKPAL 334
Cdd:COG0395 133 ------LLFRQLGLLNT-----YWGLILPYLAFGLPFGIFLLRQFFRSIPRELEEAARIDGASEFRIFWRIVLPLSKPAL 201
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 502860812 335 ANAFLIVVVQSLADFSNPLVLGGNFD--VLATQIYFYITGSQLDY 377
Cdd:COG0395 202 ATVAIFTFIGAWNDFLWPLILLTSPDlrTLPVGLASFQGQYGTDW 246
|
|
| cysT |
CHL00187 |
sulfate transport protein; Provisional |
156-359 |
6.60e-10 |
|
sulfate transport protein; Provisional
Pssm-ID: 214388 [Multi-domain] Cd Length: 237 Bit Score: 60.03 E-value: 6.60e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 156 IVWPSIAIFIPMFTNDAGEFAPLAFMNVLSQAHIIqviinSIMLSIAVGIGCTFFGLVLAIYTTRIAKRSAIIGRIFSIL 235
Cdd:CHL00187 25 LVLPILALLIKASQQPWSDFLQKATEPIALSAYSL-----TLSMALIAALINGFFGLLIAWVLVRYNFPGKRLLDAAVDL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 236 PIVTPPFVVGLGVTLMMGRSGYITELMvDWFGLTntnWLYGFTGIWLAQVLAFTPMAFMILDGAIKTIHPSLEEASYTLR 315
Cdd:CHL00187 100 PFALPTSVAGLTLATVYGDNGWIGHLL-SHLGIQ---IVFTKLGVLLAMIFVSFPFVVRTIQPVLQEIEKELEEAAWSLG 175
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 502860812 316 ASRWQTFNGVFVPLLKPALANAFLIVVVQSLADFSNPLVLGGNF 359
Cdd:CHL00187 176 ASPWQTFWKVIFPPLIPALLTGLALTFSRAIGEYGSIVIISSNI 219
|
|
| MalG |
COG3833 |
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ... |
424-674 |
2.52e-09 |
|
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];
Pssm-ID: 443045 [Multi-domain] Cd Length: 282 Bit Score: 59.01 E-value: 2.52e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 424 VTLVWSVIALLAVWIAFNALLYGSifyGSFTVNWGVDYTLTLDNFIKLFGQGMSdGAWpsLLDTLLYAGIAAPITAAFGL 503
Cdd:COG3833 21 VLIILAIIALFPILWVVSASFNPG---GSLYSSSLIPENFTLENYKKLFTETPF-LRW--FLNSLIVAVVTAIISVFLAA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 504 LIAWVVVRQQFRGKKTIEFTTMLCFAVPGTVAGVSYILAFNSapVYLTGTAAIVIISMVMRNVPVGIRAGIAGLGQIDKS 583
Cdd:COG3833 95 LAAYAFSRFRFKGRKAGLLALLLLQMFPAFLALVALYLLLSA--LGLLNTLLGLILVYLGGAIPFNTWLMKGYFDTIPKE 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 584 LDEASLSLRAGSLRTITHILLPLLRPAILSALIYSFVRAITT-VSAIVFLVTPDTR---VATAYILNRVEDGEYGVAIAy 659
Cdd:COG3833 173 LDEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDfILASVLLRSPENYtlaVGLYSFVSDQRNTNWGVFAA- 251
|
250
....*....|....*
gi 502860812 660 GSILIVVMLAIIFLF 674
Cdd:COG3833 252 GAVLVAIPIVILFLF 266
|
|
| modB |
PRK09421 |
molybdate ABC transporter permease subunit; |
475-687 |
1.66e-07 |
|
molybdate ABC transporter permease subunit;
Pssm-ID: 181841 Cd Length: 229 Bit Score: 52.62 E-value: 1.66e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 475 GMSDGAWPSLLDTLLYAGIAAPITAAFGLLIAWVVVRQQFRGKKTIEFTTMLCFAVPGTVAGVSYILAF-NSAPV--YLT 551
Cdd:PRK09421 2 ILSDPEWQAVLLSLKVSSVAVLFSLPFGILVAWLLARCRFPGKSLLDSLLHLPLVLPPVVTGYLLLISMgRRGFIgqWLY 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 552 GTAAI---------VIISMVMrNVPVGIRAGIAGLGQIDKSLDEASLSLRAGSLRTITHILLPLLRPAILSALIYSFVRA 622
Cdd:PRK09421 82 EWFGIsfafswrgaALAAAVM-AFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARS 160
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 502860812 623 -------ITTVSAIvflvtPD---TRVATAYILNRVEDGEYGvAIAYGSILIVVMLAIIFLFDWLigeARISRSK 687
Cdd:PRK09421 161 lgefgatITFVSNI-----PGetqTIPSAMYTLIQTPGGESA-AARLCIISIAIALASLLLSEWL---ARRSRKR 226
|
|
| potC |
PRK09500 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
422-682 |
1.89e-07 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 236542 [Multi-domain] Cd Length: 256 Bit Score: 52.68 E-value: 1.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 422 LPVTLVWSVIALLAVWIA------FNALLYGsIFYGSFTVNWgvdYTLTLDNfiklfgQGMSDGAWPSLLdtllYAGIAA 495
Cdd:PRK09500 5 LRGGFMTLVYAYLYIPIIilivnsFNSSRFG-INWKGFTTKW---YELLFNN------DSLLQAAQHSLT----MAVFSA 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 496 PITAAFGLLIAWVVVRQQFRGKKTIEFTTMLCFAVPGTVAGVSYILAFNSAPVYLT-GTAAIVIISMVMRNVPVGIRAGI 574
Cdd:PRK09500 71 TFATLIGSLTAVALYRYRFRGKKFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGfWSLLFAHITFCLPFVVVTVYSRL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 575 AGLgqiDKSLDEASLSLRAGSLRTITHILLPLLRPAILSALIYSFVRAITTVSAIVFLVTPDTRVATAYILNRVEDGEYG 654
Cdd:PRK09500 151 KGF---DVRMLEAAKDLGASEFTILRKIILPLALPAVAAGWLLSFTLSLDDVVVSSFVTGPSYEILPLKIYSMVKVGVSP 227
|
250 260
....*....|....*....|....*...
gi 502860812 655 VAIAYGSILIVVMLAIIFLFDWLIGEAR 682
Cdd:PRK09500 228 EVNALATILLVLSLVLVILSQLLARDKT 255
|
|
| PRK10971 |
PRK10971 |
sulfate/thiosulfate ABC transporter permease CysT; |
235-381 |
2.01e-07 |
|
sulfate/thiosulfate ABC transporter permease CysT;
Pssm-ID: 182873 Cd Length: 277 Bit Score: 53.22 E-value: 2.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 235 LPIVTPPFVVGLGVTLMMGRSGYITELMVDwFGLTNTNwlygfTGIWLAQVLAFTPMAFMI--LDGAIKTIHPSLEEASY 312
Cdd:PRK10971 102 LPFALPTAVAGLTLASLFSVNGWYGEWLAK-FDIKVTY-----TWLGIAVAMAFTSIPFVVrtVQPVLEELGPEYEEAAE 175
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 502860812 313 TLRASRWQTFNGVFVPLLKPALANAFLIVVVQSLADFSNPLVLGGN--FDVLATQIYFYITGSQLDYQAAS 381
Cdd:PRK10971 176 TLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIAGNiaWKTEVTSLMIFVRLQEFDYPAAS 246
|
|
| PRK15050 |
PRK15050 |
2-aminoethylphosphonate transport system permease PhnU; Provisional |
149-356 |
2.14e-07 |
|
2-aminoethylphosphonate transport system permease PhnU; Provisional
Pssm-ID: 237888 [Multi-domain] Cd Length: 296 Bit Score: 53.08 E-value: 2.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 149 VALIGIFIVWPSIAIFIPMFTNDAG-EFAplAFMNVLSQAHIIQVIINSIMLSIAVGIGCTFFGLVLA-IYTTRIAKRSA 226
Cdd:PRK15050 32 LLVLAPLVVYPLVRVVLQSLTGEHGlGLA--TYRAVLGSPDFRGALLTTLQIAFASTAGCLVLGVLLAlVLAFVPFPGAS 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 227 IIGRIFSILpIVTPPFVVGLGVTLMMGRSGYITELMVDWFGLTNT--NWLYGFTGIWLAQVLAFTPMAFMILDGAIKTIH 304
Cdd:PRK15050 110 LVGRFIDTF-VAFPSFLITLAFTFLYGSAGSVNIALQRLFGLEAPplDFLYSPGGVILAEITFYTPFVVRPLLAAFAQLD 188
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 502860812 305 PSLEEASYTLRASRWQTFNGVFVPLLKPALANAFLIVVVQSLADFSNPLVLG 356
Cdd:PRK15050 189 ARQLEAAASLGASPWRVARRVILPEAWPALAAGGSLCLLLTLNEFGIVLFTG 240
|
|
| permease_CysT |
TIGR02139 |
sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two ... |
153-381 |
5.75e-07 |
|
sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]
Pssm-ID: 131194 Cd Length: 265 Bit Score: 51.56 E-value: 5.75e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 153 GIFIVWPSIAIFIP---MFTNDAGEfAPLAFMNVLSQAHIIQVIINSIMLSIAVGIGCTFFGLVLAIYTTRIAKRSAIIG 229
Cdd:TIGR02139 10 GVTLTYLSLIVLLPlaaLFLKASQL-GWAGFWQIITEPRVLAAYKLSFGTALIAALINAVFGTLLAWVLVRYRFPGKRIV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 230 RIFSILPIVTPPFVVGLGVTLMMGRSGYITELMVDWfgltNTNWLYGFTGIWLAQVLAFTPMAFMILDGAIKTIHPSLEE 309
Cdd:TIGR02139 89 DALVDLPFALPTAVAGIALATLYSPNGWIGSFLAPL----GIKIAFTPLGIVIALVFVSLPFVVRTVQPVLEEIEKELEE 164
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 502860812 310 ASYTLRASRWQTFNGVFVPLLKPALANAFLIVVVQSLADFSNPLVLGGN--FDVLATQIYFYITGSQLDYQAAS 381
Cdd:TIGR02139 165 AAASLGASRWQTFWRVILPALLPALLTGFALAFARAVGEYGSVIFIAGNlpMKTEIAPLLIFQKLEQYDYAGAT 238
|
|
| ABC_perm1 |
NF038017 |
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ... |
487-664 |
2.34e-06 |
|
ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.
Pssm-ID: 411610 [Multi-domain] Cd Length: 184 Bit Score: 48.31 E-value: 2.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 487 TLLYAGIAAPITAAFGLLIAWVVVRQQFRGKKTIEFTTMLCFAVPGTVAG-VSYILAFNSAPV---YLTGTAAIVIISMV 562
Cdd:NF038017 1 SLRVSGTATLIAALIGIPLGALLALRRFPGRRLVISLLNTLMGLPPVVVGlIVYLLLSRSGPLgflGLLYTPTAMIIAQA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 563 MRNVPVGIRAGIAGLGQIDKSLDEASLSLRAGSLRTIThILLPLLRPAILSALIYSFVRAITTVSAIVFL---VTPDTRV 639
Cdd:NF038017 81 VLALPIVAGLTLAAVQGLDPELRLQILSLGATRWQALW-TLLKEARFALLAAVLAGFGRAISEVGAVMMVggnIRGYTRV 159
|
170 180
....*....|....*....|....*
gi 502860812 640 ATAYILNRVEDGEYGVAIAYGSILI 664
Cdd:NF038017 160 LTTAIVLETSKGNFDLALALGIILL 184
|
|
| cysW |
PRK11602 |
sulfate/thiosulfate ABC transporter permease CysW; |
468-674 |
4.46e-06 |
|
sulfate/thiosulfate ABC transporter permease CysW;
Pssm-ID: 183225 Cd Length: 283 Bit Score: 48.98 E-value: 4.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 468 FIKLFGQGMsDGAWPSLLD---------TLLYAGIAAPITAAFGLLIAWVVVRQQFRGKKTIEFTTMLCFAVPGTVAGVS 538
Cdd:PRK11602 42 FVQAFSKGL-MPVLQNLADpdmlhaiwlTVLIALIAVPVNLVFGILLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLV 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 539 YILAFNS-APV--YLTGTAAIVIIS---MVMRNV----PVGIRAGIAGLGQIDKSLDEASLSLRAGSLRTITHILLPLLR 608
Cdd:PRK11602 121 YLLFYGSnGPLggWLDEHNLQLMFSwpgMVLVTIfvtcPFVVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIR 200
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 502860812 609 PAILSALIYSFVRAITTVSAiVFLVTPDTRVATAYILNRVE--DGEYGVAIAYGSILIVVMLAIIFLF 674
Cdd:PRK11602 201 WALLYGVVLTNARAIGEFGA-VSVVSGSIRGETLSLPLQIEllEQDYNTVGSFTAAALLTLMAIITLF 267
|
|
| potB |
PRK09497 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
145-357 |
1.00e-05 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 181910 Cd Length: 285 Bit Score: 47.76 E-value: 1.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 145 LITIVALIGIFIVWPSIAIFIPMF-TNDAGEFAPLAFM----NVLSQAHIIQVIINSIMLSIAVGIGCTFFGLVLAIYTT 219
Cdd:PRK09497 12 IVTIVGWLVLFVFLPNLMIIGTSFlTRDDANFVKMVFTldnyTRLLDPLYAEVLLHSLNMALIATLACLVLGYPFAWFLA 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 220 RIAKRSAIIGRIFSILPIVTPPFVVGLGVTLMMGRSGYITELMVdWFGLTNT--NWLYGFTGIWLAQVLAFTPMAFMILD 297
Cdd:PRK09497 92 KLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLL-WLGVIDTpiRIMFTESAVIIGLVYILLPFMVLPLY 170
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 298 GAIKTIHPSLEEASYTLRASRWQTFNGVFVPLLKPALANAFLIVVVQSLADFSNPLVLGG 357
Cdd:PRK09497 171 SSIEKLDKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLLVLLPAMGMFYVSDLLGG 230
|
|
| thiP |
TIGR01253 |
thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, ... |
155-367 |
1.37e-05 |
|
thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, permease protein in bacteria. The protein belongs to the larger ABC transport system. It consists of atleast three components: the inner mebrane permease; thiamine binding protein; an ATP-binding subunit. It has been experimentally demonstrated that the mutants in the various steps in the de novo synthesis of the thiamine and the biologically active form, namely thiamine pyrophosphate can be exogenously supplemented with thiamine, thiamine monophosphate (TMP) or thiamine pyrophosphate (TPP). [Transport and binding proteins, Other]
Pssm-ID: 130320 [Multi-domain] Cd Length: 519 Bit Score: 48.38 E-value: 1.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 155 FIVWPSIAIFIPMFTNdAGEFAPLAFMNVLSQAHIIQVIINSIMLSIAVGIgctFFGLVLA--IYTTRIAKRSAIIgRIF 232
Cdd:TIGR01253 15 FIIAFAGAAFLAIFAL-AGEDDWRAVFQDDYLQHLILFSFGQAFLSALLSI---FFAIFLAraLFRKPFLGKKALL-KLC 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 233 SiLPIVTPPFVVGLGVTLMMGRSGYITELmVDWFGLTNTNWLYGFTGIWLAQVLAFTPMAFMILDGAIKTIHPSLEEASY 312
Cdd:TIGR01253 90 A-LTFILPALVAIFGIIGIYGRQGWLATL-ANLFGLEWQFHIYGLQGILIAHLFFNIPLAAQLFLQALENIPGEQRQLAA 167
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 502860812 313 TLRASRWQTFNGVFVPLLKPALANAFLIVVVQSLADFSNPLVLGG--NFDVLATQIY 367
Cdd:TIGR01253 168 QLGLQGWHFFKFVEWPVFRQQCLPTAALIFMLCFASFATVLSLGGgpQATTIELAIY 224
|
|
| thiP |
PRK09433 |
thiamine transporter membrane protein; Reviewed |
208-677 |
5.47e-05 |
|
thiamine transporter membrane protein; Reviewed
Pssm-ID: 181853 [Multi-domain] Cd Length: 525 Bit Score: 46.37 E-value: 5.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 208 TFFGLVLAIYTTRIAKRSAIIGRIFSI----LPIVTPPFVVGLGVTLMMGRSGYITELmVDWFGLTNTNWLYGFTGIWLA 283
Cdd:PRK09433 57 ALLSVLPAIPLARALYRRRFPGRGLLLrlcaMTLVLPVLVAVFGLLSVYGRSGWLAQL-LQALGLEWPFSIYGLQGILLA 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 284 QVLAFTPMAFMILDGAIKTIHPSLEEASYTLRASRWQTFNGVFVPLLKPALANAFLIVVVQSLADFSNPLVLGG--NFDV 361
Cdd:PRK09433 136 HVFFNLPLATRLLLQALESIPAEQRQLAAQLGMRGWQFFRLVEWPYLRRQLPPVAALIFMLCFTSFATVLTLGGgpKATT 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 362 LATQIYFYITgsqLDY---QAASTLGAFLLLFSLLVFCIQymWIGKRSYVTVSGKSYRGDVQPLPVTLVWSVIALLAVWI 438
Cdd:PRK09433 216 IELAIYQALS---FDFdlaRAALLALLQMVLCLGLVLLSQ--RLSKAIAVGATLLRGWRDPQDSLWSRLWDGLLIVLALL 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 439 AFNALLYGSIFYGsftvnwgvdytLTLDNFIKLFgqgmSDGAWPSLLDTLLYAGIAAPITAAFGLLIAWVVVRQQFRGKK 518
Cdd:PRK09433 291 LLLPPLLAVVVSG-----------LNASLLRVLA----QPALWQALWTSLRIALAAALLAVVLTMMLLWSSRELRLRQRK 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 519 ----TIEFTTMLCFAVPGTVAGVS-YILAFNSAPVYLTGTAAIVIISMVMrNVPVGIRAGIAGLGQIDKSLDEASLSLRA 593
Cdd:PRK09433 356 laaqALELSGMLILAMPGIVLATGlFLLLRNTTDLPASALGIVILTNALM-ALPYALRVLEPPMRDIAARYGRLCQSLGI 434
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 594 GSLRTITHILLPLLRPAILSALIYSFVRAITTVSAIVFLVTPDTRVATAYILNRVedGEYGVAIAYGS--ILIVVMLAII 671
Cdd:PRK09433 435 RGWSRLRLIELRALRRPLAQAFAFACALSLGDFGVIALFGSQDFRTLPFLLYQQL--GSYRSQDAAVTalLLLLLCLLLF 512
|
....*.
gi 502860812 672 FLFDWL 677
Cdd:PRK09433 513 TLIERL 518
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
514-677 |
3.96e-04 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 41.90 E-value: 3.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 514 FRGKKTIEFTTMLCFAVPGTVAGVSYILAFNSAPVYLTGTAAIVIIsmVMRNVPVGIRAGIAGLGQIDKSLDEASLSLRA 593
Cdd:pfam00528 14 RRLDRLLRPLIDLLQALPSFVLAILLVVIAILSILGHGILPAIILA--LLGWAGYARLIRRAALRSLPSDLVEAARALGA 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 594 GSLRTITHILLPLLRPAILSALIYSFVRAITTVSAI--VFLVTPDTRVATAYILNRVEDGEYGVAIAYGSILIVVMLAII 671
Cdd:pfam00528 92 SRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLefLGSWPGLGLLLIEAILGYDYPEIQGPVLAAALILLLLNLLVD 171
|
....*.
gi 502860812 672 FLFDWL 677
Cdd:pfam00528 172 ILQRLL 177
|
|
| ABC_perm1 |
NF038017 |
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ... |
200-322 |
1.20e-03 |
|
ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.
Pssm-ID: 411610 [Multi-domain] Cd Length: 184 Bit Score: 40.61 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 200 SIAVGIGCTFFGLVLAI------YTTRIAKRSAIIGRIFSILPIvtPPFVVGLGVTLMMGRSGYITELmvdwfgltntNW 273
Cdd:NF038017 1 SLRVSGTATLIAALIGIplgallALRRFPGRRLVISLLNTLMGL--PPVVVGLIVYLLLSRSGPLGFL----------GL 68
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 502860812 274 LYGFTGIWLAQVLAFTPMAFMILDGAIKTIHPSLEEASYTLRASRWQTF 322
Cdd:NF038017 69 LYTPTAMIIAQAVLALPIVAGLTLAAVQGLDPELRLQILSLGATRWQAL 117
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
208-358 |
1.68e-03 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 39.97 E-value: 1.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 502860812 208 TFFGLVLAIYTTRIAKRsaiIGRIFSILPIVTPPFVVGLgvtlmmgrsgyiteLMVDWFGLTNtnWLYGFTGIWLAQVLA 287
Cdd:pfam00528 2 IPLGIIAALRRGRRLDR---LLRPLIDLLQALPSFVLAI--------------LLVVIAILSI--LGHGILPAIILALLG 62
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 502860812 288 FTPMAFMILDGAIKTIHPSLEEASYTLRASRWQTFNGVFVPLLKPALANAFLIVVVQSLADFSNPLVLGGN 358
Cdd:pfam00528 63 WAGYARLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSW 133
|
|
| |
