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Conserved domains on  [gi|503151548|ref|WP_013386209|]
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DUF4046 domain-containing protein [Paenibacillus polymyxa]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 201-290 3.97e-55

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


:

Pssm-ID: 404192  Cd Length: 90  Bit Score: 181.37  E-value: 3.97e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503151548  201 IINIYDAAIEGKIARLPKGFWGNHEDDIQYRLKLCLRYVVLQKLKMQPQEILIKVQSPFLVKYKLDYVIYQRQSKGLQEL 280
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80

                          90
                  ....*....|
gi 503151548  281 LIDIFPEIGY 290
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 297-386 3.13e-53

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


:

Pssm-ID: 404192  Cd Length: 90  Bit Score: 176.36  E-value: 3.13e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503151548  297 ILNVYDATIEGKLAKLPKGFWGSHEEEVQHRLKLCLRYVVLQKLKIAPQEILLEVTSPFLMKYKLFNGVYQHQSKGLRDL 376
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80

                          90
                  ....*....|
gi 503151548  377 LINIFPEIEH 386
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 406-494 3.29e-51

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


:

Pssm-ID: 404192  Cd Length: 90  Bit Score: 170.97  E-value: 3.29e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503151548  406 IINMYDAALAGKLAQMPPGFWGNHEGEVQHRLKLCLRYVVLQKLNMKPHEIHMRVQKKFLIQYKLYYA-HQRQPKGIKEL 484
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAvYQRQSKGLTEL 80

                          90
                  ....*....|
gi 503151548  485 LIDVFPEIGY 494
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 499-586 1.91e-47

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


:

Pssm-ID: 404192  Cd Length: 90  Bit Score: 160.96  E-value: 1.91e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503151548  499 IINIYDAVIEG-NARLPRDFWGD-EEVVQHRFKLCFRYLVLQKLKIKPQEILSKVTPSFLMKYKLSYIMYKRQTKGLEEL 576
Cdd:pfam13255   1 IINIYDAAIEGkLAQLPRGFWGNhEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80

                          90
                  ....*....|
gi 503151548  577 LTDTFPEIDN 586
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 108-196 2.57e-47

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


:

Pssm-ID: 404192  Cd Length: 90  Bit Score: 160.57  E-value: 2.57e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503151548  108 IINIYDAAIEGKIERFPKSFWGEGK-VFQRRLKLCLRYVVLQKLEIAPQEILLKVTTTFLIKYKLFNVIYQRQTKGLTDL 186
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEeEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80

                          90
                  ....*....|
gi 503151548  187 LMDMFPEIRY 196
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 15-103 6.06e-47

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


:

Pssm-ID: 404192  Cd Length: 90  Bit Score: 159.41  E-value: 6.06e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503151548   15 IINVHDRLIDGKIARLPRNFWGNN-EVAEHRLKLCLRHVVLQKLNMEPEEILSEVTQTFLINYKLFNAVYKCQSKRLQEF 93
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHeEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80

                          90
                  ....*....|
gi 503151548   94 LIDTFPEIEY 103
Cdd:pfam13255  81 LIDIFPEIGY 90
 
Name Accession Description Interval E-value
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 201-290 3.97e-55

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


Pssm-ID: 404192  Cd Length: 90  Bit Score: 181.37  E-value: 3.97e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503151548  201 IINIYDAAIEGKIARLPKGFWGNHEDDIQYRLKLCLRYVVLQKLKMQPQEILIKVQSPFLVKYKLDYVIYQRQSKGLQEL 280
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80

                          90
                  ....*....|
gi 503151548  281 LIDIFPEIGY 290
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 297-386 3.13e-53

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


Pssm-ID: 404192  Cd Length: 90  Bit Score: 176.36  E-value: 3.13e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503151548  297 ILNVYDATIEGKLAKLPKGFWGSHEEEVQHRLKLCLRYVVLQKLKIAPQEILLEVTSPFLMKYKLFNGVYQHQSKGLRDL 376
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80

                          90
                  ....*....|
gi 503151548  377 LINIFPEIEH 386
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 406-494 3.29e-51

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


Pssm-ID: 404192  Cd Length: 90  Bit Score: 170.97  E-value: 3.29e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503151548  406 IINMYDAALAGKLAQMPPGFWGNHEGEVQHRLKLCLRYVVLQKLNMKPHEIHMRVQKKFLIQYKLYYA-HQRQPKGIKEL 484
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAvYQRQSKGLTEL 80

                          90
                  ....*....|
gi 503151548  485 LIDVFPEIGY 494
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 499-586 1.91e-47

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


Pssm-ID: 404192  Cd Length: 90  Bit Score: 160.96  E-value: 1.91e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503151548  499 IINIYDAVIEG-NARLPRDFWGD-EEVVQHRFKLCFRYLVLQKLKIKPQEILSKVTPSFLMKYKLSYIMYKRQTKGLEEL 576
Cdd:pfam13255   1 IINIYDAAIEGkLAQLPRGFWGNhEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80

                          90
                  ....*....|
gi 503151548  577 LTDTFPEIDN 586
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 108-196 2.57e-47

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


Pssm-ID: 404192  Cd Length: 90  Bit Score: 160.57  E-value: 2.57e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503151548  108 IINIYDAAIEGKIERFPKSFWGEGK-VFQRRLKLCLRYVVLQKLEIAPQEILLKVTTTFLIKYKLFNVIYQRQTKGLTDL 186
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEeEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80

                          90
                  ....*....|
gi 503151548  187 LMDMFPEIRY 196
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 15-103 6.06e-47

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


Pssm-ID: 404192  Cd Length: 90  Bit Score: 159.41  E-value: 6.06e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503151548   15 IINVHDRLIDGKIARLPRNFWGNN-EVAEHRLKLCLRHVVLQKLNMEPEEILSEVTQTFLINYKLFNAVYKCQSKRLQEF 93
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHeEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80

                          90
                  ....*....|
gi 503151548   94 LIDTFPEIEY 103
Cdd:pfam13255  81 LIDIFPEIGY 90
 
Name Accession Description Interval E-value
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 201-290 3.97e-55

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


Pssm-ID: 404192  Cd Length: 90  Bit Score: 181.37  E-value: 3.97e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503151548  201 IINIYDAAIEGKIARLPKGFWGNHEDDIQYRLKLCLRYVVLQKLKMQPQEILIKVQSPFLVKYKLDYVIYQRQSKGLQEL 280
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80

                          90
                  ....*....|
gi 503151548  281 LIDIFPEIGY 290
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 297-386 3.13e-53

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


Pssm-ID: 404192  Cd Length: 90  Bit Score: 176.36  E-value: 3.13e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503151548  297 ILNVYDATIEGKLAKLPKGFWGSHEEEVQHRLKLCLRYVVLQKLKIAPQEILLEVTSPFLMKYKLFNGVYQHQSKGLRDL 376
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80

                          90
                  ....*....|
gi 503151548  377 LINIFPEIEH 386
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 406-494 3.29e-51

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


Pssm-ID: 404192  Cd Length: 90  Bit Score: 170.97  E-value: 3.29e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503151548  406 IINMYDAALAGKLAQMPPGFWGNHEGEVQHRLKLCLRYVVLQKLNMKPHEIHMRVQKKFLIQYKLYYA-HQRQPKGIKEL 484
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAvYQRQSKGLTEL 80

                          90
                  ....*....|
gi 503151548  485 LIDVFPEIGY 494
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 499-586 1.91e-47

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


Pssm-ID: 404192  Cd Length: 90  Bit Score: 160.96  E-value: 1.91e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503151548  499 IINIYDAVIEG-NARLPRDFWGD-EEVVQHRFKLCFRYLVLQKLKIKPQEILSKVTPSFLMKYKLSYIMYKRQTKGLEEL 576
Cdd:pfam13255   1 IINIYDAAIEGkLAQLPRGFWGNhEEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80

                          90
                  ....*....|
gi 503151548  577 LTDTFPEIDN 586
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 108-196 2.57e-47

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


Pssm-ID: 404192  Cd Length: 90  Bit Score: 160.57  E-value: 2.57e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503151548  108 IINIYDAAIEGKIERFPKSFWGEGK-VFQRRLKLCLRYVVLQKLEIAPQEILLKVTTTFLIKYKLFNVIYQRQTKGLTDL 186
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHEeEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80

                          90
                  ....*....|
gi 503151548  187 LMDMFPEIRY 196
Cdd:pfam13255  81 LIDIFPEIGY 90
DUF4046 pfam13255
Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. ...
 15-103 6.06e-47

Protein of unknown function (DUF4046); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 64 and 331 amino acids in length.


Pssm-ID: 404192  Cd Length: 90  Bit Score: 159.41  E-value: 6.06e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503151548   15 IINVHDRLIDGKIARLPRNFWGNN-EVAEHRLKLCLRHVVLQKLNMEPEEILSEVTQTFLINYKLFNAVYKCQSKRLQEF 93
Cdd:pfam13255   1 IINIYDAAIEGKLAQLPRGFWGNHeEEVQHRLKLCLRYVVLQKLKIKPQEILSEVTKPFLIKYKLFYAVYQRQSKGLTEL 80

                          90
                  ....*....|
gi 503151548   94 LIDTFPEIEY 103
Cdd:pfam13255  81 LIDIFPEIGY 90
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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