NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|503330516|ref|WP_013565177|]
View 

calcium-binding protein [Isosphaera pallida]

Protein Classification

calcium-binding protein( domain architecture ID 11458495)

RTX toxin-related calcium-binding protein belongs to the serralysin-like M10 metalloprotease family, such as Bordetella pertussis adenylate cyclase toxin

Gene Ontology:  GO:0005509
SCOP:  4002779|3001975

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
COG2931 COG2931
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ...
187-436 7.02e-27

Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];


:

Pssm-ID: 442175 [Multi-domain]  Cd Length: 252  Bit Score: 109.61  E-value: 7.02e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 187 ITLSSPDGLETLVTGTSDGQPIPNLLFATNVEVTLSLDINDGTGSGLTDDQIVVDPNGGGAVNFNIFTGAGSDLVDLTGT 266
Cdd:COG2931    3 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGGGG 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 267 TGAHVVNGGDGDDTLIGGSGDDTLAGGAGNDVLAGGAGADLLIGGVGNDSLSGGAGQDSLFGGDGDDTLAGGDGDDLLVG 346
Cdd:COG2931   83 GGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTLYG 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 347 GDGDDILFGGDGNDILFGGDGNDALAGGSGDDTLFGNDGEDVLLGGPGNDEIFGGLGFDAIDGGPGNNILDAGRDGIHET 426
Cdd:COG2931  163 GAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGDGDDGLGGGGGDDTLGGGGGGDGGG 242
                        250
                 ....*....|
gi 503330516 427 IRVGDGNTIV 436
Cdd:COG2931  243 GGGGDDGLGG 252
 
Name Accession Description Interval E-value
COG2931 COG2931
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ...
187-436 7.02e-27

Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442175 [Multi-domain]  Cd Length: 252  Bit Score: 109.61  E-value: 7.02e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 187 ITLSSPDGLETLVTGTSDGQPIPNLLFATNVEVTLSLDINDGTGSGLTDDQIVVDPNGGGAVNFNIFTGAGSDLVDLTGT 266
Cdd:COG2931    3 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGGGG 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 267 TGAHVVNGGDGDDTLIGGSGDDTLAGGAGNDVLAGGAGADLLIGGVGNDSLSGGAGQDSLFGGDGDDTLAGGDGDDLLVG 346
Cdd:COG2931   83 GGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTLYG 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 347 GDGDDILFGGDGNDILFGGDGNDALAGGSGDDTLFGNDGEDVLLGGPGNDEIFGGLGFDAIDGGPGNNILDAGRDGIHET 426
Cdd:COG2931  163 GAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGDGDDGLGGGGGDDTLGGGGGGDGGG 242
                        250
                 ....*....|
gi 503330516 427 IRVGDGNTIV 436
Cdd:COG2931  243 GGGGDDGLGG 252
Peptidase_M10_C pfam08548
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix ...
231-326 1.27e-11

Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.


Pssm-ID: 430067 [Multi-domain]  Cd Length: 222  Bit Score: 64.32  E-value: 1.27e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516  231 SGLTDDQIVvdpngggavnfNIFTGAGSDLVDLTGTTG-AHVVN-----GGDGDDTLIGGSGDDTLAGGAGNDVLAGGAG 304
Cdd:pfam08548  48 SGYSQNQRI-----------NLNEGSFSDVGGLKGNVSiAHGVTienaiGGSGNDVLIGNDADNILKGGAGNDILYGGGG 116
                          90       100
                  ....*....|....*....|..
gi 503330516  305 ADLLIGGVGNDSLSGGAGQDSL 326
Cdd:pfam08548 117 ADQLWGGAGNDIFVYASAKDSL 138
PHA03169 PHA03169
hypothetical protein; Provisional
274-426 1.10e-04

hypothetical protein; Provisional


Pssm-ID: 223003 [Multi-domain]  Cd Length: 413  Bit Score: 44.58  E-value: 1.10e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 274 GGDGDDTLIGGSGDDTLAG---GAGNDVLAGGAGADlliGGVGNDSLSGGAGQDSLFGGDGDDTLAGGDGDDLLVGGDGD 350
Cdd:PHA03169  93 SGSGSESVGSPTPSPSGSAeelASGLSPENTSGSSP---ESPASHSPPPSPPSHPGPHEPAPPESHNPSPNQQPSSFLQP 169
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 503330516 351 DilfGGDGNDILFGGDGNDALAGGSGDDTLFGNDGEDvllGGPGNDEIfGGLGFDAIDGGPGNNILDAGRDGIHET 426
Cdd:PHA03169 170 S---HEDSPEEPEPPTSEPEPDSPGPPQSETPTSSPP---PQSPPDEP-GEPQSPTPQQAPSPNTQQAVEHEDEPT 238
gly_rich_SclB NF038329
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ...
274-351 1.39e-04

LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.


Pssm-ID: 468478 [Multi-domain]  Cd Length: 440  Bit Score: 44.51  E-value: 1.39e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 503330516 274 GGDGDDTLIGGSGDDTLAGGAGNDVLAGGAGADLLIGGVGNDSLSGGAGQDSLFGGDGDDtlaGGDGDDLLVGGDGDD 351
Cdd:NF038329 260 GPRGDRGEAGPDGPDGKDGERGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKD---GQPGKDGLPGKDGKD 334
 
Name Accession Description Interval E-value
COG2931 COG2931
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ...
187-436 7.02e-27

Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442175 [Multi-domain]  Cd Length: 252  Bit Score: 109.61  E-value: 7.02e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 187 ITLSSPDGLETLVTGTSDGQPIPNLLFATNVEVTLSLDINDGTGSGLTDDQIVVDPNGGGAVNFNIFTGAGSDLVDLTGT 266
Cdd:COG2931    3 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGGGG 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 267 TGAHVVNGGDGDDTLIGGSGDDTLAGGAGNDVLAGGAGADLLIGGVGNDSLSGGAGQDSLFGGDGDDTLAGGDGDDLLVG 346
Cdd:COG2931   83 GGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTLYG 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 347 GDGDDILFGGDGNDILFGGDGNDALAGGSGDDTLFGNDGEDVLLGGPGNDEIFGGLGFDAIDGGPGNNILDAGRDGIHET 426
Cdd:COG2931  163 GAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGDGDDGLGGGGGDDTLGGGGGGDGGG 242
                        250
                 ....*....|
gi 503330516 427 IRVGDGNTIV 436
Cdd:COG2931  243 GGGGDDGLGG 252
COG2931 COG2931
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ...
175-418 1.13e-26

Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442175 [Multi-domain]  Cd Length: 252  Bit Score: 108.84  E-value: 1.13e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 175 DFQVVTPNSQDRITLSSPDGLETLVTGTSDGQPIPNLLFATNVEVTLSLDINDGTGSGLTDDQIVVDPNGGGAVNFNIFT 254
Cdd:COG2931    9 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGGGGGGDDTD 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 255 GAGSDLVDLTGTTGAHVVNGGDGDDTLIGGSGDDTLAGGAGNDVLAGGAGADLLIGGVGNDSLSGGAGQDSLFGGDGDDT 334
Cdd:COG2931   89 GGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTLYGGAGNDT 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 335 LAGGDGDDLLVGGDGDDILFGGDGNDILFGGDGNDALAGGSGDDTLFGNDGEDVLLGGPGNDEIFGGLGFDAIDGGPGNN 414
Cdd:COG2931  169 LDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGDGDDGLGGGGGDDTLGGGGGGDGGGGGGGDD 248

                 ....
gi 503330516 415 ILDA 418
Cdd:COG2931  249 GLGG 252
COG2931 COG2931
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ...
194-435 1.99e-26

Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442175 [Multi-domain]  Cd Length: 252  Bit Score: 108.07  E-value: 1.99e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 194 GLETLVTGTSDGQPIPNLLFATNVEVTLSLDINDGTGSGLTDDQIVVDPNGGGAVNFNIFTGAGSDLVDLTGTTGAHVVN 273
Cdd:COG2931    1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 274 GGDGDDTLIGGSGDDTLAGGAGNDVLAGGAGADLLIGGVGNDSLSGGAGQDSLFGGDGDDTLAGGDGDDLLVGGDGDDIL 353
Cdd:COG2931   81 GGGGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 354 FGGDGNDILFGGDGNDALAGGSGDDTLFGNDGEDVLLGGPGNDEIFGGLGFDAIDGGPGNNILDAGRDGIHETIRVGDGN 433
Cdd:COG2931  161 YGGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGDGDDGLGGGGGDDTLGGGGGGDG 240

                 ..
gi 503330516 434 TI 435
Cdd:COG2931  241 GG 242
COG2931 COG2931
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ...
149-400 4.14e-24

Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442175 [Multi-domain]  Cd Length: 252  Bit Score: 101.52  E-value: 4.14e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 149 GGDQFVVDGRVVTPVNVGLTRIASFRDFQVVTPNSQDRITLSSPDGLETLVTGTSDGQPIPNLLFATNVEVTLSLDINDG 228
Cdd:COG2931    1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 229 TGSGLTDDQIVVDPNGGGAVNFNIFTGAGSDLVDLTGTTGAHVVNGGDGDDTLIGGSGDDTLAGGAGNDVLAGGAGADLL 308
Cdd:COG2931   81 GGGGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 309 IGGVGNDSLSGGAGQDSLFGGDGDDTLAGGDGDDLLVGGDGDDILFGGDGNDILFGGDGNDALAGGSGDDTLFGNDGEDV 388
Cdd:COG2931  161 YGGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGDGDDGLGGGGGDDTLGGGGGGDG 240
                        250
                 ....*....|..
gi 503330516 389 LLGGPGNDEIFG 400
Cdd:COG2931  241 GGGGGGDDGLGG 252
COG2931 COG2931
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ...
224-470 5.16e-23

Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442175 [Multi-domain]  Cd Length: 252  Bit Score: 98.44  E-value: 5.16e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 224 DINDGTGSGLTDDQIVVDPNGGGAVNFNIFTGAGSDLVDLTGTTGAHVVNGGDGDDTLIGGSGDDTLAGGAGNDVLAGGA 303
Cdd:COG2931    4 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGGGGG 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 304 GADLLIGGVGNDSLSGGAGQDSLFGGDGDDTLAGGDGDDLLVGGDGDDILFGGDGNDILFGGDGNDALAGGSGDDTLFGN 383
Cdd:COG2931   84 GDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGNDTLYGG 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 384 DGEDVLLGGPGNDEIFGGLGFDAIDGGPGNNILDAGRDGIHETIRVGDGNTIVYVHRPYFGNAEDRAVVGRGHNQIRLGG 463
Cdd:COG2931  164 AGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGDGDDGLGGGGGDDTLGGGGGGDGGGG 243

                 ....*..
gi 503330516 464 GLVEVDA 470
Cdd:COG2931  244 GGGDDGL 250
COG2931 COG2931
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ...
138-391 5.41e-22

Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442175 [Multi-domain]  Cd Length: 252  Bit Score: 95.36  E-value: 5.41e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 138 GAESSGNLTSVGGDQFVVDGRVVTPVNVGLTRIASFRDFQVVTPNSQDRITLSSPDGLETLVTGTSDGQPIPNLLFATNV 217
Cdd:COG2931    1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 218 EVTLSLDINDGTGSGLTDDQIVVDPNGGGAVNFNIFTGAGSDLvdLTGTTGAHVVNGGDGDDTLIGGSGDDTLAGGAGND 297
Cdd:COG2931   81 GGGGDDTDGGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDT--LTGGAGDDTLYGGAGNDTLTGGAGNDTLYGGAGND 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 298 VLAGGAGADLLIGGVGNDSLSGGAGQDSLFGGDGDDTLAGGDGDDLLVGGDGDDILFGGDGNDILFGGDGNDALAGGSGD 377
Cdd:COG2931  159 TLYGGAGNDTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGDGDDGLGGGGGDDTLGGGGGG 238
                        250
                 ....*....|....
gi 503330516 378 DTLFGNDGEDVLLG 391
Cdd:COG2931  239 DGGGGGGGDDGLGG 252
COG2931 COG2931
Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and ...
137-382 8.21e-20

Ca2+-binding protein, RTX toxin-related [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442175 [Multi-domain]  Cd Length: 252  Bit Score: 89.19  E-value: 8.21e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 137 GGAESSGNLTSVGGDQFVVDGRVVTPVNVGLTRIASFRDFQVVTPNSQDRITLSSPDGLETLVTGTSDGQPIPNLLFATN 216
Cdd:COG2931    9 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGLDGGGGGGGGDGGGGGGGDDTD 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 217 VEVTLSLDINDGTGSGLTDDQIVVDPNGGGAVNFNIFTGAGSDLvdLTGTTGAHVVNGGDGDDTLIGGSGDDTLAGGAGN 296
Cdd:COG2931   89 GGGDGGDGGGGGTGDDTGDGGGGNDTLTGGDGNDTLTGGAGDDT--LYGGAGNDTLTGGAGNDTLYGGAGNDTLYGGAGN 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 297 DVLAGGAGADLLIGGVGNDSLSGGAGQDSLFGGDGDDTLAGGDGDDLLVGGDGDDILFGGDGNDILFGGDGNDALAGGSG 376
Cdd:COG2931  167 DTLDGGAGNDTLTGGAGNDTLTGGAGNDTLDGGGGDDTLGGGGGDDGLDGGDGDDGLGGGGGDDTLGGGGGGDGGGGGGG 246

                 ....*.
gi 503330516 377 DDTLFG 382
Cdd:COG2931  247 DDGLGG 252
Peptidase_M10_C pfam08548
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix ...
231-326 1.27e-11

Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.


Pssm-ID: 430067 [Multi-domain]  Cd Length: 222  Bit Score: 64.32  E-value: 1.27e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516  231 SGLTDDQIVvdpngggavnfNIFTGAGSDLVDLTGTTG-AHVVN-----GGDGDDTLIGGSGDDTLAGGAGNDVLAGGAG 304
Cdd:pfam08548  48 SGYSQNQRI-----------NLNEGSFSDVGGLKGNVSiAHGVTienaiGGSGNDVLIGNDADNILKGGAGNDILYGGGG 116
                          90       100
                  ....*....|....*....|..
gi 503330516  305 ADLLIGGVGNDSLSGGAGQDSL 326
Cdd:pfam08548 117 ADQLWGGAGNDIFVYASAKDSL 138
Peptidase_M10_C pfam08548
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix ...
337-393 3.29e-09

Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.


Pssm-ID: 430067 [Multi-domain]  Cd Length: 222  Bit Score: 57.38  E-value: 3.29e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 503330516  337 GGDGDDLLVGGDGDDILFGGDGNDILFGGDGNDALAGGSGDDTLFGNDGEDVLLGGP 393
Cdd:pfam08548  86 GGSGNDVLIGNDADNILKGGAGNDILYGGGGADQLWGGAGNDIFVYASAKDSLTAAP 142
Peptidase_M10_C pfam08548
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix ...
354-396 2.39e-07

Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.


Pssm-ID: 430067 [Multi-domain]  Cd Length: 222  Bit Score: 51.60  E-value: 2.39e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 503330516  354 FGGDGNDILFGGDGNDALAGGSGDDTLFGNDGEDVLLGGPGND 396
Cdd:pfam08548  85 IGGSGNDVLIGNDADNILKGGAGNDILYGGGGADQLWGGAGND 127
HemolysinCabind pfam00353
RTX calcium-binding nonapeptide repeat (4 copies);
327-362 3.07e-07

RTX calcium-binding nonapeptide repeat (4 copies);


Pssm-ID: 459777 [Multi-domain]  Cd Length: 36  Bit Score: 46.66  E-value: 3.07e-07
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 503330516  327 FGGDGDDTLAGGDGDDLLVGGDGDDILFGGDGNDIL 362
Cdd:pfam00353   1 YGGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
HemolysinCabind pfam00353
RTX calcium-binding nonapeptide repeat (4 copies);
337-371 3.96e-07

RTX calcium-binding nonapeptide repeat (4 copies);


Pssm-ID: 459777 [Multi-domain]  Cd Length: 36  Bit Score: 46.28  E-value: 3.96e-07
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 503330516  337 GGDGDDLLVGGDGDDILFGGDGNDILFGGDGNDAL 371
Cdd:pfam00353   2 GGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
HemolysinCabind pfam00353
RTX calcium-binding nonapeptide repeat (4 copies);
345-380 5.42e-07

RTX calcium-binding nonapeptide repeat (4 copies);


Pssm-ID: 459777 [Multi-domain]  Cd Length: 36  Bit Score: 45.89  E-value: 5.42e-07
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 503330516  345 VGGDGDDILFGGDGNDILFGGDGNDALAGGSGDDTL 380
Cdd:pfam00353   1 YGGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
Peptidase_M10_C pfam08548
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix ...
345-396 6.83e-07

Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.


Pssm-ID: 430067 [Multi-domain]  Cd Length: 222  Bit Score: 50.45  E-value: 6.83e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 503330516  345 VGGDGDDILFGGDGNDILFGGDGNDALAGGSGDDTLFGNDGEDVLLGGPGND 396
Cdd:pfam08548  85 IGGSGNDVLIGNDADNILKGGAGNDILYGGGGADQLWGGAGNDIFVYASAKD 136
HemolysinCabind pfam00353
RTX calcium-binding nonapeptide repeat (4 copies);
274-308 1.76e-06

RTX calcium-binding nonapeptide repeat (4 copies);


Pssm-ID: 459777 [Multi-domain]  Cd Length: 36  Bit Score: 44.74  E-value: 1.76e-06
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 503330516  274 GGDGDDTLIGGSGDDTLAGGAGNDVLAGGAGADLL 308
Cdd:pfam00353   2 GGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
37-446 3.07e-06

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 50.16  E-value: 3.07e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516  37 SPLTGVLSITGTFDPETGLPNDDRVLLSLNATNPAQLDVTLNEEVVSLNAAEVQSISVALGGGADLLTINLANGNPIPVG 116
Cdd:COG4625   79 GGGGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAG 158
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 117 GLTYDGGLDPAGLLNRLQLLGGAESSGNLTSVGGDQFVVDGRVVTPVNVGLTRIASFRDFQVVTPNSQDRITLSSPDGLE 196
Cdd:COG4625  159 GAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGG 238
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 197 TLVTGTSDGQPIPNLLFATNVEVTLSLDINDGTGSGLTDDQIVVDPNGGGAVNFNIFTGAGSDLVDLTGTTGAHVVNGGD 276
Cdd:COG4625  239 GGGGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 318
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 277 GDDTLIGGSGDDTLAGGAGNDVLAGGAGADLLIGGVGNDSLSGGAGQDSLFGGDGDDTLAGGDGDDLLVGGDGDDILFGG 356
Cdd:COG4625  319 GGGGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGG 398
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 357 DGNDILFGGDGNDALAGGSGDDTLFGNDGEDVLLGGPGNDEIFGGLGFDAIDGGPGNNILDAGRDGIHETIRVGDGNTIV 436
Cdd:COG4625  399 GGGGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTL 478
                        410
                 ....*....|
gi 503330516 437 YVHRPYFGNA 446
Cdd:COG4625  479 TGNNTYTGTT 488
HemolysinCabind pfam00353
RTX calcium-binding nonapeptide repeat (4 copies);
282-317 5.38e-06

RTX calcium-binding nonapeptide repeat (4 copies);


Pssm-ID: 459777 [Multi-domain]  Cd Length: 36  Bit Score: 43.20  E-value: 5.38e-06
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 503330516  282 IGGSGDDTLAGGAGNDVLAGGAGADLLIGGVGNDSL 317
Cdd:pfam00353   1 YGGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
HemolysinCabind pfam00353
RTX calcium-binding nonapeptide repeat (4 copies);
319-353 8.95e-06

RTX calcium-binding nonapeptide repeat (4 copies);


Pssm-ID: 459777 [Multi-domain]  Cd Length: 36  Bit Score: 42.42  E-value: 8.95e-06
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 503330516  319 GGAGQDSLFGGDGDDTLAGGDGDDLLVGGDGDDIL 353
Cdd:pfam00353   2 GGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
HemolysinCabind pfam00353
RTX calcium-binding nonapeptide repeat (4 copies);
354-389 1.43e-05

RTX calcium-binding nonapeptide repeat (4 copies);


Pssm-ID: 459777 [Multi-domain]  Cd Length: 36  Bit Score: 42.04  E-value: 1.43e-05
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 503330516  354 FGGDGNDILFGGDGNDALAGGSGDDTLFGNDGEDVL 389
Cdd:pfam00353   1 YGGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
HemolysinCabind pfam00353
RTX calcium-binding nonapeptide repeat (4 copies);
309-344 1.52e-05

RTX calcium-binding nonapeptide repeat (4 copies);


Pssm-ID: 459777 [Multi-domain]  Cd Length: 36  Bit Score: 42.04  E-value: 1.52e-05
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 503330516  309 IGGVGNDSLSGGAGQDSLFGGDGDDTLAGGDGDDLL 344
Cdd:pfam00353   1 YGGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
Peptidase_M10_C pfam08548
Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix ...
363-425 2.35e-05

Peptidase M10 serralysin C terminal; Serralysins are peptidases related to mammalian matrix metallopeptidases (MMPs). The peptidase unit is found at the N terminal while this domain at the C terminal forms a corkscrew and is thought to be important for secretion of the protein through the bacterial cell wall. This domain contains the calcium ion binding domain pfam00353.


Pssm-ID: 430067 [Multi-domain]  Cd Length: 222  Bit Score: 45.83  E-value: 2.35e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 503330516  363 FGGDGNDALAGGSGDDTLFGNDGEDVLLGGPGNDEIFGGLGFDAIDGGPGNNILDAGRDGIHE 425
Cdd:pfam08548  85 IGGSGNDVLIGNDADNILKGGAGNDILYGGGGADQLWGGAGNDIFVYASAKDSLTAAPDTIRD 147
HemolysinCabind pfam00353
RTX calcium-binding nonapeptide repeat (4 copies);
301-335 4.22e-05

RTX calcium-binding nonapeptide repeat (4 copies);


Pssm-ID: 459777 [Multi-domain]  Cd Length: 36  Bit Score: 40.50  E-value: 4.22e-05
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 503330516  301 GGAGADLLIGGVGNDSLSGGAGQDSLFGGDGDDTL 335
Cdd:pfam00353   2 GGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
HemolysinCabind pfam00353
RTX calcium-binding nonapeptide repeat (4 copies);
363-398 6.01e-05

RTX calcium-binding nonapeptide repeat (4 copies);


Pssm-ID: 459777 [Multi-domain]  Cd Length: 36  Bit Score: 40.11  E-value: 6.01e-05
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 503330516  363 FGGDGNDALAGGSGDDTLFGNDGEDVLLGGPGNDEI 398
Cdd:pfam00353   1 YGGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
HemolysinCabind pfam00353
RTX calcium-binding nonapeptide repeat (4 copies);
292-326 7.18e-05

RTX calcium-binding nonapeptide repeat (4 copies);


Pssm-ID: 459777 [Multi-domain]  Cd Length: 36  Bit Score: 40.11  E-value: 7.18e-05
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 503330516  292 GGAGNDVLAGGAGADLLIGGVGNDSLSGGAGQDSL 326
Cdd:pfam00353   2 GGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
HemolysinCabind pfam00353
RTX calcium-binding nonapeptide repeat (4 copies);
264-299 9.00e-05

RTX calcium-binding nonapeptide repeat (4 copies);


Pssm-ID: 459777 [Multi-domain]  Cd Length: 36  Bit Score: 39.73  E-value: 9.00e-05
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 503330516  264 TGTTGAHVVNGGDGDDTLIGGSGDDTLAGGAGNDVL 299
Cdd:pfam00353   1 YGGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
PHA03169 PHA03169
hypothetical protein; Provisional
274-426 1.10e-04

hypothetical protein; Provisional


Pssm-ID: 223003 [Multi-domain]  Cd Length: 413  Bit Score: 44.58  E-value: 1.10e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 274 GGDGDDTLIGGSGDDTLAG---GAGNDVLAGGAGADlliGGVGNDSLSGGAGQDSLFGGDGDDTLAGGDGDDLLVGGDGD 350
Cdd:PHA03169  93 SGSGSESVGSPTPSPSGSAeelASGLSPENTSGSSP---ESPASHSPPPSPPSHPGPHEPAPPESHNPSPNQQPSSFLQP 169
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 503330516 351 DilfGGDGNDILFGGDGNDALAGGSGDDTLFGNDGEDvllGGPGNDEIfGGLGFDAIDGGPGNNILDAGRDGIHET 426
Cdd:PHA03169 170 S---HEDSPEEPEPPTSEPEPDSPGPPQSETPTSSPP---PQSPPDEP-GEPQSPTPQQAPSPNTQQAVEHEDEPT 238
gly_rich_SclB NF038329
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ...
274-351 1.39e-04

LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.


Pssm-ID: 468478 [Multi-domain]  Cd Length: 440  Bit Score: 44.51  E-value: 1.39e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 503330516 274 GGDGDDTLIGGSGDDTLAGGAGNDVLAGGAGADLLIGGVGNDSLSGGAGQDSLFGGDGDDtlaGGDGDDLLVGGDGDD 351
Cdd:NF038329 260 GPRGDRGEAGPDGPDGKDGERGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKD---GQPGKDGLPGKDGKD 334
HemolysinCabind pfam00353
RTX calcium-binding nonapeptide repeat (4 copies);
373-407 2.38e-04

RTX calcium-binding nonapeptide repeat (4 copies);


Pssm-ID: 459777 [Multi-domain]  Cd Length: 36  Bit Score: 38.57  E-value: 2.38e-04
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 503330516  373 GGSGDDTLFGNDGEDVLLGGPGNDEIFGGLGFDAI 407
Cdd:pfam00353   2 GGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
83-435 2.68e-04

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 43.99  E-value: 2.68e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516   83 SLNAAEVQSISVAlGGGADLLTINLANGNPIPVGGLTYDGGLDPAGLLNRLQLLGGAESSGNLTSVGGDQFVVDGRVVTP 162
Cdd:COG3210   803 TITAAGTTAINVT-GSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITVGS 881
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516  163 VNVGLTRIASFRDFQVVTPNSQDRITLSSPDGLETLVTGTSDGQPIPNLLFATNVEVTLSLDINDGTGSGLTDDQIVVDP 242
Cdd:COG3210   882 GGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAASASD 961
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516  243 NGGGAVNFNIFTGAGSDLVDLTGTTGAHVVNGGDGDDTLIGGSGDDTLAGGAGNDVLAGGAGADLLIGGVGNDSLSGGAG 322
Cdd:COG3210   962 GAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTAATAG 1041
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516  323 QDSLFGGDGDDTLAGGDGDDLLVGGDGDDILFGGDGNDILFGGDGNDALAGGSGDDTLFGNDGEDVLLGGPGNDEIFGGL 402
Cdd:COG3210  1042 GQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTGGVTASKV 1121
                         330       340       350
                  ....*....|....*....|....*....|...
gi 503330516  403 GFDAIDGGPGNNILDAGRDGIHETIRVGDGNTI 435
Cdd:COG3210  1122 GGTTTVGATGTSTASTEAAGAGTLTGLVAVSAV 1154
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
86-423 6.08e-04

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 42.83  E-value: 6.08e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516   86 AAEVQSISVALGGGADLLTINLANGNPIPVGGLTydGGLDPAGLLNRLQLLGGAESSGNLTSVGGDQFVVDGRVVTPVNV 165
Cdd:COG3210   795 SIDITADGTITAAGTTAINVTGSGGTITINTATT--GLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAA 872
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516  166 GLTRIASFRDFQVVTPNSQDRITLSSPDGLETLVTGTSDGQPIPNLLFATNVEVTLSLDINDGTGSGLTDDQIVVDPNGG 245
Cdd:COG3210   873 TAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNA 952
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516  246 GAVNFNIFTGAGSDLVDLTGTTGAHVVNGGDGDDTLIGGSGDDTLAGGAGNDVLAGGAGADLLIGGVGNDSLSGGAGQDS 325
Cdd:COG3210   953 GLSAASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASAT 1032
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516  326 LFGGDGDDTLAGGDGDDLLVGGDGDDILFGGDGNDILFGGDGNDALAGGSGDDTLFGNDGEDVLLGGPGNDEIFGGLGFD 405
Cdd:COG3210  1033 GTGTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTS 1112
                         330
                  ....*....|....*...
gi 503330516  406 AIDGGPGNNILDAGRDGI 423
Cdd:COG3210  1113 TGGVTASKVGGTTTVGAT 1130
AidA COG3468
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
81-359 9.13e-04

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 42.24  E-value: 9.13e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516  81 VVSLNAAEVQSISVALGGGADLLTINLANGNPIPVGGLTYDGGLDPAGLLNRLQLLGGAESSGNLTSVGGDQFVVDGRVV 160
Cdd:COG3468  150 GGTGAAAAGGGTGSGGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAG 229
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 161 TPVNVGLTRIASFRDFQVVTPNSQDRITLSSPDGLETLVTGTSDGQPIPNLLFATNVEVTLSLDINDGTGSGLTDDQIVV 240
Cdd:COG3468  230 SGGNTGGGVGGGGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGG 309
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503330516 241 DPNGGGAVNFNIFTGAGSDLVDLTGTTGAHVVNGGDGDDTLIGGSGDDTLAGGAGNDVLAGGAGADLLIGGVGNDSLSGG 320
Cdd:COG3468  310 GGNGGGGGGGSNAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSD 389
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 503330516 321 AGQDSLFGGDGDDTLAGGDGDDLLVGGDGDDILFGGDGN 359
Cdd:COG3468  390 GVGTGLTTGGTGNNGGGGVGGGGGGGLTLTGGTLTVNGN 428
HemolysinCabind pfam00353
RTX calcium-binding nonapeptide repeat (4 copies);
381-416 3.10e-03

RTX calcium-binding nonapeptide repeat (4 copies);


Pssm-ID: 459777 [Multi-domain]  Cd Length: 36  Bit Score: 35.49  E-value: 3.10e-03
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 503330516  381 FGNDGEDVLLGGPGNDEIFGGLGFDAIDGGPGNNIL 416
Cdd:pfam00353   1 YGGDGNDTLVGGAGNDTIYGGAGNDTLDGGAGNDTL 36
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH