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Conserved domains on  [gi|503677201|ref|WP_013911277|]
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F0F1 ATP synthase subunit gamma [Corynebacterium ulcerans]

Protein Classification

F0F1 ATP synthase subunit gamma( domain architecture ID 10792582)

F0F1 ATP synthase subunit gamma is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

EC:  7.1.2.2
Gene Ontology:  GO:0045261|GO:0005524|GO:0046933|GO:0042777
PubMed:  25730883|30888962|25667968|18216260|8951091
SCOP:  4000503

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-319 9.98e-129

F0F1 ATP synthase subunit gamma; Validated


:

Pssm-ID: 235535  Cd Length: 284  Bit Score: 368.67  E-value: 9.98e-129
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201   1 MANLRELRDRIRSVNSTKKITKAQELIATSRITKAQARVEASQPYATEIHKVMERLAAASSLDHPMLHEREDgKRAAVLV 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASASEYDHPLLVEREV-KRVGYIV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201  81 ISSDRGMAGGYNYNVFKKAAELIKLLEDNGYEVVRYVTGNKAVGYYKFRGEDVAGAWTGFSQDPSWEETHSVRRHLIDGF 160
Cdd:PRK05621  80 VTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDAY 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 161 IAGskgtakyreglntgegdpiqGFDQVHVVYTEFESMLVQTARAHQLLPIEPVIETEEvqisdegilqnagePTPDVEF 240
Cdd:PRK05621 160 DNG--------------------EFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEE--------------TSWDYEY 205

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 503677201 241 EPDADTLFEAMLPQYVSRSLFAMFLEAAAAESASRRNAMKSATDNATALVKDLSRVANQARQAQITQEITEIVGGASAL 319
Cdd:PRK05621 206 EPDAEEILDALLPRYVESQIYQALLENKASEQAARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
 
Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-319 9.98e-129

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 368.67  E-value: 9.98e-129
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201   1 MANLRELRDRIRSVNSTKKITKAQELIATSRITKAQARVEASQPYATEIHKVMERLAAASSLDHPMLHEREDgKRAAVLV 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASASEYDHPLLVEREV-KRVGYIV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201  81 ISSDRGMAGGYNYNVFKKAAELIKLLEDNGYEVVRYVTGNKAVGYYKFRGEDVAGAWTGFSQDPSWEETHSVRRHLIDGF 160
Cdd:PRK05621  80 VTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDAY 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 161 IAGskgtakyreglntgegdpiqGFDQVHVVYTEFESMLVQTARAHQLLPIEPVIETEEvqisdegilqnagePTPDVEF 240
Cdd:PRK05621 160 DNG--------------------EFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEE--------------TSWDYEY 205

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 503677201 241 EPDADTLFEAMLPQYVSRSLFAMFLEAAAAESASRRNAMKSATDNATALVKDLSRVANQARQAQITQEITEIVGGASAL 319
Cdd:PRK05621 206 EPDAEEILDALLPRYVESQIYQALLENKASEQAARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-319 2.08e-116

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 337.51  E-value: 2.08e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201   1 MANLRELRDRIRSVNSTKKITKAQELIATSRITKAQARVEASQPYATEIHKVMERLAAASS-LDHPMLHEREDgKRAAVL 79
Cdd:COG0224    1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASPeYDHPLLEEREV-KRVGLI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201  80 VISSDRGMAGGYNYNVFKKAAELIKLLEDNGYEVVRYVTGNKAVGYYKFRGEDVAGAWTGFSQDPSWEETHSVRRHLIDG 159
Cdd:COG0224   80 VITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLDA 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 160 FIAGskgtakyreglntgegdpiqGFDQVHVVYTEFESMLVQTARAHQLLPIEPVIETEEvqisdegilqnAGEPTPDVE 239
Cdd:COG0224  160 FLAG--------------------EIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEA-----------EWETRADYI 208

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 240 FEPDADTLFEAMLPQYVSRSLFAMFLEAAAAESASRRNAMKSATDNATALVKDLSRVANQARQAQITQEITEIVGGASAL 319
Cdd:COG0224  209 FEPSPEEILDALLPRYLESQIYQALLESAASEHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
ATP-synt pfam00231
ATP synthase;
3-318 1.59e-106

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 312.54  E-value: 1.59e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201    3 NLRELRDRIRSVNSTKKITKAQELIATSRITKAQARVEASQPYATEIHKVMERLAAASSLDHPMLHEREDGKRAAVLVIS 82
Cdd:pfam00231   1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASPEDSHPLLERREVKKVGLIVIT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201   83 SDRGMAGGYNYNVFKKAAELIKLLEDNGYEVVRYVTGNKAVGYYKFRGEDVAGAWTG-FSQDPSWEETHSVRRHLIDGFI 161
Cdd:pfam00231  81 SDRGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDYFKKRGYEVILEFTGsLGDKPTFEEAAEIADELLDAFL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201  162 AGskgtakyreglntgegdpiqGFDQVHVVYTEFESMLVQTARAHQLLPIEPVIETEEvqisdegilqnaGEPTPDVEFE 241
Cdd:pfam00231 161 AG--------------------EIDEVYLVYNRFVSAISQEPTVEQLLPLDPEEEEEE------------EESLADYEFE 208

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 503677201  242 PDADTLFEAMLPQYVSRSLFAMFLEAAAAESASRRNAMKSATDNATALVKDLSRVANQARQAQITQEITEIVGGASA 318
Cdd:pfam00231 209 PSAEEVLDALLPRYLESQIYGALLESAASEQAARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-319 7.31e-95

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 283.03  E-value: 7.31e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201    2 ANLRELRDRIRSVNSTKKITKAQELIATSRITKAQARVEASQPYATEIHKVMERLAAASS-LDHPMLHEREDgKRAAVLV 80
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLLnVDHPLLKSREV-KKVGILV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201   81 ISSDRGMAGGYNYNVFKKAAELIKLLEDNGYEVVRYVTGNKAVGYYKFRGEDVAGAWTGFSQDPSWEETHSVRRHLIDGF 160
Cdd:TIGR01146  80 ITSDRGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLDAF 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201  161 IAGSkgtakyreglntgegdpiqgFDQVHVVYTEFESMLVQTARAHQLLPIEPvieteevQISDEGilqnaGEPTPDVEF 240
Cdd:TIGR01146 160 DAGE--------------------FDELYIVYNKFVSSISQEPTVKQLLPLSA-------QGPDEG-----FKFSQDYIF 207

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 503677201  241 EPDADTLFEAMLPQYVSRSLFAMFLEAAAAESASRRNAMKSATDNATALVKDLSRVANQARQAQITQEITEIVGGASAL 319
Cdd:TIGR01146 208 EPDEEEILDDLLPRYLESQIYGALLESAASEQAARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-316 9.82e-88

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 264.44  E-value: 9.82e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201   2 ANLRELRDRIRSVNSTKKITKAQELIATSRITKAQARVEASQPYATEIHKVMERLAAASSLDHPMLHEREDGKRAAVLVI 81
Cdd:cd12151    1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDEDPPLLEKREVKKVLLIVI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201  82 SSDRGMAGGYNYNVFKKAAELIKllEDNGYEVVRYVTGNKAVGYYKFRGEDVAGAWTGFSQDPSWEETHSVRRHLIDGFI 161
Cdd:cd12151   81 TSDRGLCGGFNSNIIKAAEELIK--EADGKEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILDFL 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 162 AGskgtakyreglntgegdpiqGFDQVHVVYTEFESMLVQTARAHQLLPIEPVIETEEvqisdegilqnAGEPTPDVEFE 241
Cdd:cd12151  159 NG--------------------EIDEVYIIYNKFKSAISQEPVVEQLLPLDKEEEEEE-----------SEGSRSDYIFE 207

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 503677201 242 PDADTLFEAMLPQYVSRSLFAMFLEAAAAESASRRNAMKSATDNATALVKDLSRVANQARQAQITQEITEIVGGA 316
Cdd:cd12151  208 PDPEEVLDALLPFYLASLLYRALLESLASEQAARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
 
Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-319 9.98e-129

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 368.67  E-value: 9.98e-129
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201   1 MANLRELRDRIRSVNSTKKITKAQELIATSRITKAQARVEASQPYATEIHKVMERLAAASSLDHPMLHEREDgKRAAVLV 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASASEYDHPLLVEREV-KRVGYIV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201  81 ISSDRGMAGGYNYNVFKKAAELIKLLEDNGYEVVRYVTGNKAVGYYKFRGEDVAGAWTGFSQDPSWEETHSVRRHLIDGF 160
Cdd:PRK05621  80 VTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDAY 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 161 IAGskgtakyreglntgegdpiqGFDQVHVVYTEFESMLVQTARAHQLLPIEPVIETEEvqisdegilqnagePTPDVEF 240
Cdd:PRK05621 160 DNG--------------------EFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEE--------------TSWDYEY 205

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 503677201 241 EPDADTLFEAMLPQYVSRSLFAMFLEAAAAESASRRNAMKSATDNATALVKDLSRVANQARQAQITQEITEIVGGASAL 319
Cdd:PRK05621 206 EPDAEEILDALLPRYVESQIYQALLENKASEQAARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-319 2.08e-116

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 337.51  E-value: 2.08e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201   1 MANLRELRDRIRSVNSTKKITKAQELIATSRITKAQARVEASQPYATEIHKVMERLAAASS-LDHPMLHEREDgKRAAVL 79
Cdd:COG0224    1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASPeYDHPLLEEREV-KRVGLI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201  80 VISSDRGMAGGYNYNVFKKAAELIKLLEDNGYEVVRYVTGNKAVGYYKFRGEDVAGAWTGFSQDPSWEETHSVRRHLIDG 159
Cdd:COG0224   80 VITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLDA 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 160 FIAGskgtakyreglntgegdpiqGFDQVHVVYTEFESMLVQTARAHQLLPIEPVIETEEvqisdegilqnAGEPTPDVE 239
Cdd:COG0224  160 FLAG--------------------EIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEA-----------EWETRADYI 208

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 240 FEPDADTLFEAMLPQYVSRSLFAMFLEAAAAESASRRNAMKSATDNATALVKDLSRVANQARQAQITQEITEIVGGASAL 319
Cdd:COG0224  209 FEPSPEEILDALLPRYLESQIYQALLESAASEHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
ATP-synt pfam00231
ATP synthase;
3-318 1.59e-106

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 312.54  E-value: 1.59e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201    3 NLRELRDRIRSVNSTKKITKAQELIATSRITKAQARVEASQPYATEIHKVMERLAAASSLDHPMLHEREDGKRAAVLVIS 82
Cdd:pfam00231   1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASPEDSHPLLERREVKKVGLIVIT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201   83 SDRGMAGGYNYNVFKKAAELIKLLEDNGYEVVRYVTGNKAVGYYKFRGEDVAGAWTG-FSQDPSWEETHSVRRHLIDGFI 161
Cdd:pfam00231  81 SDRGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDYFKKRGYEVILEFTGsLGDKPTFEEAAEIADELLDAFL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201  162 AGskgtakyreglntgegdpiqGFDQVHVVYTEFESMLVQTARAHQLLPIEPVIETEEvqisdegilqnaGEPTPDVEFE 241
Cdd:pfam00231 161 AG--------------------EIDEVYLVYNRFVSAISQEPTVEQLLPLDPEEEEEE------------EESLADYEFE 208

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 503677201  242 PDADTLFEAMLPQYVSRSLFAMFLEAAAAESASRRNAMKSATDNATALVKDLSRVANQARQAQITQEITEIVGGASA 318
Cdd:pfam00231 209 PSAEEVLDALLPRYLESQIYGALLESAASEQAARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-319 7.31e-95

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 283.03  E-value: 7.31e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201    2 ANLRELRDRIRSVNSTKKITKAQELIATSRITKAQARVEASQPYATEIHKVMERLAAASS-LDHPMLHEREDgKRAAVLV 80
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLLnVDHPLLKSREV-KKVGILV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201   81 ISSDRGMAGGYNYNVFKKAAELIKLLEDNGYEVVRYVTGNKAVGYYKFRGEDVAGAWTGFSQDPSWEETHSVRRHLIDGF 160
Cdd:TIGR01146  80 ITSDRGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLDAF 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201  161 IAGSkgtakyreglntgegdpiqgFDQVHVVYTEFESMLVQTARAHQLLPIEPvieteevQISDEGilqnaGEPTPDVEF 240
Cdd:TIGR01146 160 DAGE--------------------FDELYIVYNKFVSSISQEPTVKQLLPLSA-------QGPDEG-----FKFSQDYIF 207

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 503677201  241 EPDADTLFEAMLPQYVSRSLFAMFLEAAAAESASRRNAMKSATDNATALVKDLSRVANQARQAQITQEITEIVGGASAL 319
Cdd:TIGR01146 208 EPDEEEILDDLLPRYLESQIYGALLESAASEQAARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-316 9.82e-88

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 264.44  E-value: 9.82e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201   2 ANLRELRDRIRSVNSTKKITKAQELIATSRITKAQARVEASQPYATEIHKVMERLAAASSLDHPMLHEREDGKRAAVLVI 81
Cdd:cd12151    1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDEDPPLLEKREVKKVLLIVI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201  82 SSDRGMAGGYNYNVFKKAAELIKllEDNGYEVVRYVTGNKAVGYYKFRGEDVAGAWTGFSQDPSWEETHSVRRHLIDGFI 161
Cdd:cd12151   81 TSDRGLCGGFNSNIIKAAEELIK--EADGKEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILDFL 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 162 AGskgtakyreglntgegdpiqGFDQVHVVYTEFESMLVQTARAHQLLPIEPVIETEEvqisdegilqnAGEPTPDVEFE 241
Cdd:cd12151  159 NG--------------------EIDEVYIIYNKFKSAISQEPVVEQLLPLDKEEEEEE-----------SEGSRSDYIFE 207

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 503677201 242 PDADTLFEAMLPQYVSRSLFAMFLEAAAAESASRRNAMKSATDNATALVKDLSRVANQARQAQITQEITEIVGGA 316
Cdd:cd12151  208 PDPEEVLDALLPFYLASLLYRALLESLASEQAARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
PRK13423 PRK13423
F0F1 ATP synthase subunit gamma; Provisional
 1-319 7.05e-67

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237384  Cd Length: 288  Bit Score: 211.45  E-value: 7.05e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201   1 MANLRELRDRIRSVNSTKKITKAQELIATSRITKAQARVEASQPYATEIHKVMERLAAASSLD-HPMLHEREdGKRAAVL 79
Cdd:PRK13423   1 MASLKDIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAARPYAAKLGEVLGSLAARAGEDaHPLLVPRE-VKKALLV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201  80 VISSDRGMAGGYNYNVFKKAAELIKLLEDNgYEVVRYVT-GNKAVGYYKFRGEDVAGAWTGFSQDPSWEETHSVRRHLID 158
Cdd:PRK13423  80 VVTSDRGLCGGFNSNLCKAAERFLKENKDE-FEEISLTTvGRKGREFLKNRGLIIRKNYGGVVANLTYETAALLAQELIE 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 159 GFIAGSkgtakyreglntgegdpiqgFDQVHVVYTEFESMLVQTARAHQLLPIEPVIETEEvqisdegilqnagEPTPDV 238
Cdd:PRK13423 159 GYLAGE--------------------YDEVYLVYNEFKSVMSQDITVQQLLPIDPPEAADD-------------EYLPEY 205

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 239 EFEPDADTLFEAMLPQYVSRSLFAMFLEAAAAESASRRNAMKSATDNATALVKDLSRVANQARQAQITQEITEIVGGASA 318
Cdd:PRK13423 206 IYEPSRDALLAELLPKHVEVQIYRALLESVASEHGARMTAMDSATKNATEMIGKLTLQYNRARQAAITTELMEIVSGAEA 285


                 .
gi 503677201 319 L 319
Cdd:PRK13423 286 L 286
PRK13427 PRK13427
F0F1 ATP synthase subunit gamma; Provisional
 1-319 5.96e-64

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172049  Cd Length: 289  Bit Score: 204.02  E-value: 5.96e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201   1 MANLRELRDRIRSVNSTKKITKAQELIATSRITKAQARVEASQPYATEIHKVMERLAAASSLDH-PMLHEREDGKRAAVL 79
Cdd:PRK13427   1 MATPREIKKRINSVKNTRKITRTMEMVSTAKSKKATDRVNAAHPYANKIKELVSSLASLEGVVHsPYLRRPEKIRTVALL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201  80 VISSDRGMAGGYNYNVFKKAAELIKLLEDNGYEVVRYVTGNKAVGYYKFRGEDVAGAWTGFSQDPSWEETHSVRRHLIDG 159
Cdd:PRK13427  81 IITANRGLCGGFNSNLNRMAKARIAELKKKGVNVELHIVGKKGISFFKFAGEKAEKTYTHIDDKSGYKEAEELANLFMER 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 160 FIAGSkgtakyreglntgegdpiqgFDQVHVVYTEFESMLVQTARAHQLLPIEPVIETEEvqisdegilqnaGEPTPDVE 239
Cdd:PRK13427 161 FANES--------------------VDAVEIASTVYYSAASQKPETTRVLPLEPPTAAAE------------GSVQDDVV 208

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 240 FEPDADTLFEAMLPQYVSRSLFAMFLEAAAAESASRRNAMKSATDNATALVKDLSRVANQARQAQITQEITEIVGGASAL 319
Cdd:PRK13427 209 YEPSPEAILESLLPLVVKTAFLKAILEANASEQIARRIAMKSATDAASEMIKLLTRGYNRVRQAKITQEISEIVGGADAL 288
PRK14111 PRK14111
F0F1 ATP synthase subunit gamma; Provisional
 1-320 3.25e-63

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184515  Cd Length: 290  Bit Score: 201.95  E-value: 3.25e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201   1 MANLRELRDRIRSVNSTKKITKAQELIATSRITKAQARVEASQPYATEIHKVMERLAAASS---LDHPMLHEREDGKRAA 77
Cdd:PRK14111   1 MPSTREIRRRIRSVKNTAQITRAMEMVSASKMRRAQRNVLATRPYADRIRDVMGDLTARTVgaaRVGPLLEKRPTVKRVA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201  78 VLVISSDRGMAGGYNYNVFKKAAELIKLLEDNGYEVVRYVTGNKAVGYYKFRGEDVAGAWTGFSQDPSWEETHSVRRHLI 157
Cdd:PRK14111  81 LILVTPDRGLAGSLNANVLRRAIRFITDERSMGRTVDVIAIGRKGRDFMVRTGQALVAEFTRLGDAPKLEAILPVATSAI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 158 DGFIAGSkgtakyreglntgegdpiqgFDQVHVVYTEFESMLVQTARAHQLLPIEPVieteevqisdegilQNAGEPTPD 237
Cdd:PRK14111 161 NGFQSGK--------------------YDEVYVLYSEFINTLVQRPTIKQLLPIEPP--------------EISTTTVVD 206

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 238 VEFEPDADTLFEAMLPQYVSRSLFAMFLEAAAAESASRRNAMKSATDNATALVKDLSRVANQARQAQITQEITEIVGGAS 317
Cdd:PRK14111 207 YTYEPSPEEVLRALLPRFVEVQLYQAVLESIASEHSARMVAMRNATDNAKELVRDLTLTYNKARQAAITKEVSEIASGAA 286


                 ...
gi 503677201 318 ALG 320
Cdd:PRK14111 287 ALG 289
PRK13424 PRK13424
F0F1 ATP synthase subunit gamma; Provisional
 1-319 3.70e-48

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172047  Cd Length: 291  Bit Score: 163.38  E-value: 3.70e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201   1 MANLRELRDRIRSVNSTKKITKAQELIATSRITKAQARVEASQPYATEIHKVMERLAA-ASSLDHPMLHEREDGKRAAVL 79
Cdd:PRK13424   1 MPSLKDVKVKIAGVKKTKQITKAMNMVASAKLRGAQQRIERFRPYAEKFYDMLGDLASrADSSAHPLLEVREEIKTCGIV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201  80 VISSDRGMAGGYNYNVFKKAAELIKLLEDNGYEVVRYVTGNKAVGYYKFRGEDVAGAWTGFSQDPSWEETHSVRRHLIDG 159
Cdd:PRK13424  81 LITSDRGLCGSFNANLINAALKLAKQKTAEGKTVKFYCVGKKGRDAIRKTDFEIVTAYADQMTSFDFQLANSIGLEVIDG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 160 FIAGSkgtakyreglntgegdpiqgFDQVHVVYTEFESMLVQTARAHQLLPIEPVIETEEvqisdegilqnAGEPTPDVE 239
Cdd:PRK13424 161 YLTGE--------------------LDEVVLVYGEFVSMARQLPITLQILPIAPEEAEEE-----------EAGASSEYI 209

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 240 FEPDADTLFEAMLPQYVSRSLFAMFLEAAAAESASRRNAMKSATDNATALVKDLSRVANQARQAQITQEITEIVGGASAL 319
Cdd:PRK13424 210 YEPSVEGLLAELLPRFIKVQIYRGLLDTSASEHAARMTAMDNATRNCDDMIGSLTLLYNKTRQASITRELMDIVGGAEAL 289
PRK13426 PRK13426
F0F1 ATP synthase subunit gamma; Provisional
 1-319 2.43e-46

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237385  Cd Length: 291  Bit Score: 158.40  E-value: 2.43e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201   1 MANLRELRDRIRSVNSTKKITKAQELIATSRITKAQARVEASQPYATEIHKVMER-LAAASSLDHPMLHEREDgKRAAVL 79
Cdd:PRK13426   1 MASLKEIKTRIASVQSTRKITSAMKMVASAKLHKAQGAIENMLPYQRKLNHILTNfLSADLDVESPFTVERPV-KRVAIV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201  80 VISSDRGMAGGYNYNVFKKAAELIKLLEDNGY-EVVRYVTGNKAVGYYKFRGEDVAGAWTGFSQDPSWEETHSVRRHLID 158
Cdd:PRK13426  80 VFSSNTSLCGGFNANIIKLLLQTIGEYRTLGQdNILIYPVGKKIEEAVKKLGFKVQGDYQTLADKPSYEEAAALAMRLME 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 159 GFIAGSkgtakyreglntgegdpiqgFDQVHVVYTEFESMLVQTARAHQLLPIepvieteevQISDEGILQNAGEPTPDV 238
Cdd:PRK13426 160 LFLEGE--------------------IDKVELIYHHFKSMGVQVLTRETYLPI---------DLSQEKNAEHAGGVANDY 210

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 239 EFEPDADTLFEAMLPQYVSRSLFAMFLEAAAAESASRRNAMKSATDNATALVKDLSRVANQARQAQITQEITEIVGGASA 318
Cdd:PRK13426 211 IIEPSADTVLNDLIPKLLSLKIYTALLDSNASEHAARMVAMQIATDNANELLQELTLQYNKSRQQAITNELLDIVGGSMA 290


                 .
gi 503677201 319 L 319
Cdd:PRK13426 291 N 291
PRK13425 PRK13425
F0F1 ATP synthase subunit gamma; Provisional
 1-319 1.70e-45

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 139564  Cd Length: 291  Bit Score: 156.51  E-value: 1.70e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201   1 MANLRELRDRIRSVNSTKKITKAQELIATSRITKAQARVEASQPYATEIHKVMERLAAA--SSLDhPMLHEREDGKRAAV 78
Cdd:PRK13425   1 MPTLKDIRVRIKGVKSTQQVTKAMKMVAAAKLRRAQERAIMARPYAAKLKEMLGSLSAKvdTSLN-PLLSPRSEVNKVLV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201  79 LVISSDRGMAGGYNYNVFKKAAELI-----KLLEDNGYEVVryVTGNKAVGYYKFRGEDVAGAWTGFSQDPSWeethSVR 153
Cdd:PRK13425  80 ILITSDRGLCGAFNTNIIKLAQKVIhedyaALHAKGGVSMI--CAGTRGFDFFRKRGYNIVKGYPGVFQNLDF----SVA 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 154 RHLIDgfiagsKGTAKYREGlntgegdpiqGFDQVHVVYTEFESMLVQTARAHQLLPIEPVIeteevqisdegilqNAGE 233
Cdd:PRK13425 154 KEIAE------TASGMYLRG----------EVDKVVVVYNEFKSVLAPNLKSEVLLPITPEK--------------PGAE 203

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 234 PTPDVEFEPDADTLFEAMLPQYVSRSLFAMFLEAAAAESASRRNAMKSATDNATALVKDLSRVANQARQAQITQEITEIV 313
Cdd:PRK13425 204 GGSDYIYEPSPAAIIDELVPKHLNTQVWRMMLESNAAEQAARMTAMDSATENAKELLRTLNISYNRARQAAITKELSEIV 283


                 ....*.
gi 503677201 314 GGASAL 319
Cdd:PRK13425 284 AGADAL 289
PRK14110 PRK14110
F0F1 ATP synthase subunit gamma; Provisional
 1-319 4.35e-35

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184514  Cd Length: 291  Bit Score: 129.12  E-value: 4.35e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201   1 MANL--RELRDRIRSVNSTKKITKAQELIATSRITKAQARVEASQPYATEIHKVMERLAAASSL-DHPMLHEREDgKRAA 77
Cdd:PRK14110   1 MAKLspRDIKRKIQGIKNTRRITNAMKVVSAAKLRKAQELLYASRPYSEKLYELISDLAAHIDReSHPLLERREE-KNVD 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201  78 VLVISSDRGMAGGYNYNVFKKAAELIKLLEDNGYEVVRYVTGNKAVGYYKFRGEDVAGawtgfsqdpSWEETHsvRRHLI 157
Cdd:PRK14110  80 LVIITADRGLAGAFNSNVIKTAERLIQEKQSEGVRVNLILIGRKGVQYFSKRGYNIIK---------SYEDVF--RKEIN 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 158 DGFIagSKGTAKYREGLNTGEGDPIQGFDQVHVVYTEFESMLvqtaraHQLLPIEPviETEEVQISDEGILqnageptpd 237
Cdd:PRK14110 149 FSVV--KEVGGILASRYIEEETDAVYLINNEMITRATYKPKV------RKFLPFEV--EAQEKKLDELSVY--------- 209

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 238 vEFEPDADTLFEAMLPQYVSRSLFAMFLEAAAAESASRRNAMKSATDNATALVKDLSRVANQARQAQITQEITEIVGGAS 317
Cdd:PRK14110 210 -NIEVSEEEFLDKLLQLYLNYQLYRALVESNAAEHFARMVAMDNATRNAGELIRKWTLIFNKARQEAITTELIDIVNAAE 288


                 ..
gi 503677201 318 AL 319
Cdd:PRK14110 289 AM 290
PRK13422 PRK13422
F0F1 ATP synthase subunit gamma; Provisional
 1-319 5.64e-33

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184046  Cd Length: 298  Bit Score: 123.62  E-value: 5.64e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201   1 MANLRELRDRIRSVNSTKKITKAQELIATSRITKAQARVEASQPYATEIHKVMERLAAAS-SLDHPMLHEReDGKRAAVL 79
Cdd:PRK13422   1 MSNAREIRSKVQSVKNTQKITGAMELVAASKMRGAIVKMNNVRPYVESANTIIKNVTAASiDYPNPYLFDR-DVKRVGYI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201  80 VISSDRGMAGGYNYNVFKKAAELIKLLEDNGYEVVRYVTGNKAVGYYKfRGEDVAGAWTGFSQDPSWEethsvrrhlidG 159
Cdd:PRK13422  80 VTSTDRGLCGGLNINLFKHVLKEIKNNIEDRVGVDVCVIGSKAENFFA-KLKDVNIVATAHYNDKDKE-----------G 147

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 160 FIAGSKGTAKYR-EGLNTGEgdpiqgFDQVHVVYTEFESMLVQTARAHQLLPIEPVIETEEVQISDEgilqNAGEPTPDV 238
Cdd:PRK13422 148 SIRAIGGAVKVMlDKFTAGE------IDRLYMSSNQFVSTIKQRPRLQTLLPIQDIFSAEEIKANKE----KATKGHWDY 217

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 503677201 239 EFEPDADTLFEAMLPQYVSRSLFAMFLEAAAAESASRRNAMKSATDNATALVKDLSRVANQARQAQITQEITEIVGGASA 318
Cdd:PRK13422 218 IYERDIEEVLNALCIRYIEAQVRGAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAA 297


                 .
gi 503677201 319 L 319
Cdd:PRK13422 298 V 298
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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