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Concise Results
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MULTISPECIES: DHH family phosphoesterase [Leuconostoc]
Protein Classification
DHH family phosphoesterase ( domain architecture ID 11467548 )
DHH family phosphoesterase such as Bacillus subtilis cyclic-di-AMP phosphodiesterase GdpP and Listeria monocytogenes cyclic-di-AMP phosphodiesterase PdeA
List of domain hits
Name
Accession
Description
Interval
E-value
GdpP
COG3887 Cyclic di-AMP phosphodiesterase GdpP, contains GGDEF-like and DHH domains [Signal transduction ...
11-674
0e+00
Cyclic di-AMP phosphodiesterase GdpP, contains GGDEF-like and DHH domains [Signal transduction mechanisms];
Pssm-ID: 443095 [Multi-domain]
Cd Length: 662
Bit Score: 843.66
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 11 PIFFQNT KL STVAFL LL VSSVMSV I FAMLF N ITF GL IW L AIV I IG L VFSAQ A FKEVSEDAQE Y LSG L G YR IARSEQ EAL I 90
Cdd:COG3887 2 KKKLKKR KL RPLLLV LL LLLLLLL I ILLFY N WII GL LG L LLL I LL L YYNIK A ERKRRRELEK Y IET L S YR VDKAGK EAL L 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 91 RM PIGI I LL NQ D KK I D W I NPY MQAYLDKR D V LG LE L SELDNK L A L EIDNYADAS E TN TIT WQG R QFSLFVQQ ------ N L 164
Cdd:COG3887 82 EL PIGI V LL DE D GE I E W Y NPY FSEIFGDE D L LG KS L EDIFPE L N L DKLKEEEGE E PF TIT IGD R YYRVYYKK vkdeee D L 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 165 R VI Y LM D IS EY AAIT K K YE DHQLFS G L I SV DNY E EVT DG M S ESE T S T L RTY VTR A L S DWA L E HHIYIR R LNTLH Y VMFGY 244
Cdd:COG3887 162 R LL Y FF D VT EY EELK K E YE EERPVI G I I FI DNY D EVT QS M D ESE R S L L NSE VTR K L N DWA N E YGGFLK R YSSDR Y LAVMN 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 245 QSA L QEA EEDKFS V L KD IRE A T AQQ N S PVTLS V GI A Y DDTDINK L AKM AQ TN LDLALGRGGDQVVVK SEKAA a RFYGG AS 324
Cdd:COG3887 242 EKI L EKL EEDKFS I L DE IRE I T SGN N I PVTLS I GI G Y GGDSLAE L GEL AQ SA LDLALGRGGDQVVVK DGDKV - RFYGG KT 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 325 N PM EKRTRVRAR MVSQTIA EL MEQA DN IM I V GH AM PD L D AV G SGL GV W R M A QTKN K P A FL VLDE kh V YSD I QL L LA E LRK 404
Cdd:COG3887 321 N AV EKRTRVRAR VIAHALR EL IKES DN VF I M GH KN PD M D SI G AAI GV L R I A KMLG K E A YI VLDE -- V NPS I DR L ME E IKE 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 405 KP aefvapgs NID D SIVDEAR AL K L VRD NTLLV L VD HAKA S ISGA P Q LLE R l A NR VVVIDHHR LA E QGL d E K P LMS YIEP 484
Cdd:COG3887 399 EE -------- EYE D LFISPEE AL E L ITK NTLLV V VD THRP S LVES P E LLE K - A EK VVVIDHHR RG E EFI - E N P VLV YIEP 468
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 485 YASSTSELV V ELLQYQ DQSH a PIT KLE S TA M L G GI QI DTKNFTLRTG S RTF D AASYLR A NGAD SN L IQSFM KE KFSDFKS 564
Cdd:COG3887 469 YASSTSELV T ELLQYQ PDKI - KLS KLE A TA L L A GI VV DTKNFTLRTG V RTF E AASYLR R NGAD TI L VKQLF KE DLDTYIA 547
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 565 R SH L VNL AEI HEGN - AIAVG DNKDI YS GLLT AQAADELL Q I S G VY ASFV I TKR Q DG RV GISARS T GE R NVQ RT ME A LGGG 643
Cdd:COG3887 548 R AE L ISS AEI YRDG i AIAVG PEDIE YS QVIA AQAADELL N I K G IE ASFV L TKR S DG KI GISARS L GE I NVQ VI ME K LGGG 627
650 660 670
....*....|....*....|....*....|.
gi 504091212 644 GHL S NA AT Q IAN VT T EEAK Q QL LNI I A E QS E 674
Cdd:COG3887 628 GHL T NA GA Q LKD VT I EEAK E QL KEA I D E YL E 658
Name
Accession
Description
Interval
E-value
GdpP
COG3887 Cyclic di-AMP phosphodiesterase GdpP, contains GGDEF-like and DHH domains [Signal transduction ...
11-674
0e+00
Cyclic di-AMP phosphodiesterase GdpP, contains GGDEF-like and DHH domains [Signal transduction mechanisms];
Pssm-ID: 443095 [Multi-domain]
Cd Length: 662
Bit Score: 843.66
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 11 PIFFQNT KL STVAFL LL VSSVMSV I FAMLF N ITF GL IW L AIV I IG L VFSAQ A FKEVSEDAQE Y LSG L G YR IARSEQ EAL I 90
Cdd:COG3887 2 KKKLKKR KL RPLLLV LL LLLLLLL I ILLFY N WII GL LG L LLL I LL L YYNIK A ERKRRRELEK Y IET L S YR VDKAGK EAL L 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 91 RM PIGI I LL NQ D KK I D W I NPY MQAYLDKR D V LG LE L SELDNK L A L EIDNYADAS E TN TIT WQG R QFSLFVQQ ------ N L 164
Cdd:COG3887 82 EL PIGI V LL DE D GE I E W Y NPY FSEIFGDE D L LG KS L EDIFPE L N L DKLKEEEGE E PF TIT IGD R YYRVYYKK vkdeee D L 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 165 R VI Y LM D IS EY AAIT K K YE DHQLFS G L I SV DNY E EVT DG M S ESE T S T L RTY VTR A L S DWA L E HHIYIR R LNTLH Y VMFGY 244
Cdd:COG3887 162 R LL Y FF D VT EY EELK K E YE EERPVI G I I FI DNY D EVT QS M D ESE R S L L NSE VTR K L N DWA N E YGGFLK R YSSDR Y LAVMN 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 245 QSA L QEA EEDKFS V L KD IRE A T AQQ N S PVTLS V GI A Y DDTDINK L AKM AQ TN LDLALGRGGDQVVVK SEKAA a RFYGG AS 324
Cdd:COG3887 242 EKI L EKL EEDKFS I L DE IRE I T SGN N I PVTLS I GI G Y GGDSLAE L GEL AQ SA LDLALGRGGDQVVVK DGDKV - RFYGG KT 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 325 N PM EKRTRVRAR MVSQTIA EL MEQA DN IM I V GH AM PD L D AV G SGL GV W R M A QTKN K P A FL VLDE kh V YSD I QL L LA E LRK 404
Cdd:COG3887 321 N AV EKRTRVRAR VIAHALR EL IKES DN VF I M GH KN PD M D SI G AAI GV L R I A KMLG K E A YI VLDE -- V NPS I DR L ME E IKE 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 405 KP aefvapgs NID D SIVDEAR AL K L VRD NTLLV L VD HAKA S ISGA P Q LLE R l A NR VVVIDHHR LA E QGL d E K P LMS YIEP 484
Cdd:COG3887 399 EE -------- EYE D LFISPEE AL E L ITK NTLLV V VD THRP S LVES P E LLE K - A EK VVVIDHHR RG E EFI - E N P VLV YIEP 468
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 485 YASSTSELV V ELLQYQ DQSH a PIT KLE S TA M L G GI QI DTKNFTLRTG S RTF D AASYLR A NGAD SN L IQSFM KE KFSDFKS 564
Cdd:COG3887 469 YASSTSELV T ELLQYQ PDKI - KLS KLE A TA L L A GI VV DTKNFTLRTG V RTF E AASYLR R NGAD TI L VKQLF KE DLDTYIA 547
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 565 R SH L VNL AEI HEGN - AIAVG DNKDI YS GLLT AQAADELL Q I S G VY ASFV I TKR Q DG RV GISARS T GE R NVQ RT ME A LGGG 643
Cdd:COG3887 548 R AE L ISS AEI YRDG i AIAVG PEDIE YS QVIA AQAADELL N I K G IE ASFV L TKR S DG KI GISARS L GE I NVQ VI ME K LGGG 627
650 660 670
....*....|....*....|....*....|.
gi 504091212 644 GHL S NA AT Q IAN VT T EEAK Q QL LNI I A E QS E 674
Cdd:COG3887 628 GHL T NA GA Q LKD VT I EEAK E QL KEA I D E YL E 658
PRK14538
PRK14538 putative bifunctional signaling protein/50S ribosomal protein L9; Provisional
38-669
3.20e-108
putative bifunctional signaling protein/50S ribosomal protein L9; Provisional
Pssm-ID: 173004 [Multi-domain]
Cd Length: 838
Bit Score: 346.82
E-value: 3.20e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 38 ML FN I t F G L I W LAI V II GLVFSAQAFKEVS -- EDAQEYL S G L GYRIARSEQ E A L IRM PIGI I L LNQ - D K K I D W I NPY MQA 114
Cdd:PRK14538 56 FT FN F - L G K I I LAI L II SFLLNIKKNAQIK rl QNKLSLW S K L SFHVSQIGE E V L NEL PIGI V L IDI s S K E I Q W L NPY ANF 134
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 115 Y L DKRDV l GLE L SELDNKL A l EIDNYA D ASETNT IT WQGRQ F SL F VQQN L R V I YL MDIS E YAA I TKKYEDHQ L FSGL I SV 194
Cdd:PRK14538 135 I L KNPEI - NTP L AQINESM A - QLLLTS D KIPKTI IT LKNQK F EC F YKKD L N V F YL FNAT E KEQ I KHLFLQKT L ALAM I TF 212
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 195 DN Y EE VTDGMSE SE T S TLRTYVTR ALSD WALEHHI Y IRR L NTLHYVMFGYQSA L QEAE E D KFS V L KD IR EATAQQNSP VT 274
Cdd:PRK14538 213 DN L EE SLIRYDL SE Q S QIQGEYLS ALSD FIEPYEG Y LKQ L IDDRFLLLINRQN L DKMI E N KFS I L DT IR NISHKYQLK VT 292
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 275 LS V GIA YDDTDIN KLA KMA Q TNLD LA LG RGGDQ V VV KS E KAAARFY G GASNPME K RTR V R AR MVS Q TIAELMEQADNIM I 354
Cdd:PRK14538 293 LS M GIA CWNLSYD KLA TYS Q NAIE LA QK RGGDQ A VV NI E NEKIKYF G AKIASLS K QSK V N AR VNA Q NLVDILKKNPHCF I 372
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 355 V GH AMP DLD AV GS GLGVWRM A Q T KNK -- PAFLV LDE KHVYSDIQLLLAE L R K KPAE fvapgsn IDDS I VDEAR A L K LVRD 432
Cdd:PRK14538 373 M GH NHT DLD SL GS MIAFYKI A L T IHP dn NNYII LDE EKLDKSLTPVYHQ L I K QEHK ------- VTLN I ITTQQ A S K MIKK 445
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 433 N T L LVLV D HAKAS I SGA P Q LL E r L A N RVV VIDHHR LA E QGL de KPLM SY IEPY ASST S EL V VEL LQYQDQ s HAP IT KL E S 512
Cdd:PRK14538 446 N D L IAVL D TQTKD I VNS P E LL S - L T N NII VIDHHR AT E EII -- PSIF SY VDSS ASST V EL L VEL MGFLEK - EIH IT AF E A 521
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 513 TA M LG GI Q IDT KN F TL RT G SRTF DA AS Y L RAN GAD SNLIQ S FMKEK F SDFKSRSH L VNLA EI HEGN a I A VGDNKD IY SG - 591
Cdd:PRK14538 522 SI M YA GI L IDT NA F IY RT S SRTF EV AS K L KDL GAD AIEVK S WLRKD F DKVLEINK L ISKM EI FMDR - F A IIKSEE IY DN r 600
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 504091212 592 LLT AQ A A DEL L Q I SG V Y A S F V I T K RQ D GRVG ISARS TG E R NVQ RT ME ALG GGGHL SN AATQI ANVTTEEAK Q Q L LNII 669
Cdd:PRK14538 601 SFL AQ V A ESV L N I QN V D A A F M I A K IS D NTIA ISARS YN E I NVQ TI ME QME GGGHL NS AATQI KGTNIKTVT Q T L KHLL 678
DHH
pfam01368 DHH family; It is predicted that this family of proteins all perform a phosphoesterase ...
351-519
5.61e-26
DHH family; It is predicted that this family of proteins all perform a phosphoesterase function. It included the single stranded DNA exonuclease RecJ.
Pssm-ID: 460177 [Multi-domain]
Cd Length: 145
Bit Score: 103.81
E-value: 5.61e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 351 N I M I V GH AM PD L D AV GS G LG VW R maqtknkpaflvldekhvysdiql L L A EL RKKPA E FVA P GSNIDDSIVDEARALK L V 430
Cdd:pfam01368 1 K I V I Y GH YN PD G D GI GS A LG LY R ------------------------ Y L K EL VGPDV E YYI P DRLEEGYGINPEAIEE L I 56
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 431 RDN TLL VL VD HAKA S IS G APQLL E r L ANR V V VIDHH RLAEQGL D EKPLMSYI EP Y ASSTSE L V VE LLQY QDQSHA - P I T K 509
Cdd:pfam01368 57 DFD TLL IT VD CGIK S VE G IELAK E - L GID V I VIDHH LPNDFLP D ADAIINPR EP P ASSTSE V V FK LLQY AYGEEG k E I D K 135
170
....*....|
gi 504091212 510 LESTAM L G GI 519
Cdd:pfam01368 136 ELADLL L L GI 145
Name
Accession
Description
Interval
E-value
GdpP
COG3887 Cyclic di-AMP phosphodiesterase GdpP, contains GGDEF-like and DHH domains [Signal transduction ...
11-674
0e+00
Cyclic di-AMP phosphodiesterase GdpP, contains GGDEF-like and DHH domains [Signal transduction mechanisms];
Pssm-ID: 443095 [Multi-domain]
Cd Length: 662
Bit Score: 843.66
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 11 PIFFQNT KL STVAFL LL VSSVMSV I FAMLF N ITF GL IW L AIV I IG L VFSAQ A FKEVSEDAQE Y LSG L G YR IARSEQ EAL I 90
Cdd:COG3887 2 KKKLKKR KL RPLLLV LL LLLLLLL I ILLFY N WII GL LG L LLL I LL L YYNIK A ERKRRRELEK Y IET L S YR VDKAGK EAL L 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 91 RM PIGI I LL NQ D KK I D W I NPY MQAYLDKR D V LG LE L SELDNK L A L EIDNYADAS E TN TIT WQG R QFSLFVQQ ------ N L 164
Cdd:COG3887 82 EL PIGI V LL DE D GE I E W Y NPY FSEIFGDE D L LG KS L EDIFPE L N L DKLKEEEGE E PF TIT IGD R YYRVYYKK vkdeee D L 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 165 R VI Y LM D IS EY AAIT K K YE DHQLFS G L I SV DNY E EVT DG M S ESE T S T L RTY VTR A L S DWA L E HHIYIR R LNTLH Y VMFGY 244
Cdd:COG3887 162 R LL Y FF D VT EY EELK K E YE EERPVI G I I FI DNY D EVT QS M D ESE R S L L NSE VTR K L N DWA N E YGGFLK R YSSDR Y LAVMN 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 245 QSA L QEA EEDKFS V L KD IRE A T AQQ N S PVTLS V GI A Y DDTDINK L AKM AQ TN LDLALGRGGDQVVVK SEKAA a RFYGG AS 324
Cdd:COG3887 242 EKI L EKL EEDKFS I L DE IRE I T SGN N I PVTLS I GI G Y GGDSLAE L GEL AQ SA LDLALGRGGDQVVVK DGDKV - RFYGG KT 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 325 N PM EKRTRVRAR MVSQTIA EL MEQA DN IM I V GH AM PD L D AV G SGL GV W R M A QTKN K P A FL VLDE kh V YSD I QL L LA E LRK 404
Cdd:COG3887 321 N AV EKRTRVRAR VIAHALR EL IKES DN VF I M GH KN PD M D SI G AAI GV L R I A KMLG K E A YI VLDE -- V NPS I DR L ME E IKE 398
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 405 KP aefvapgs NID D SIVDEAR AL K L VRD NTLLV L VD HAKA S ISGA P Q LLE R l A NR VVVIDHHR LA E QGL d E K P LMS YIEP 484
Cdd:COG3887 399 EE -------- EYE D LFISPEE AL E L ITK NTLLV V VD THRP S LVES P E LLE K - A EK VVVIDHHR RG E EFI - E N P VLV YIEP 468
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 485 YASSTSELV V ELLQYQ DQSH a PIT KLE S TA M L G GI QI DTKNFTLRTG S RTF D AASYLR A NGAD SN L IQSFM KE KFSDFKS 564
Cdd:COG3887 469 YASSTSELV T ELLQYQ PDKI - KLS KLE A TA L L A GI VV DTKNFTLRTG V RTF E AASYLR R NGAD TI L VKQLF KE DLDTYIA 547
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 565 R SH L VNL AEI HEGN - AIAVG DNKDI YS GLLT AQAADELL Q I S G VY ASFV I TKR Q DG RV GISARS T GE R NVQ RT ME A LGGG 643
Cdd:COG3887 548 R AE L ISS AEI YRDG i AIAVG PEDIE YS QVIA AQAADELL N I K G IE ASFV L TKR S DG KI GISARS L GE I NVQ VI ME K LGGG 627
650 660 670
....*....|....*....|....*....|.
gi 504091212 644 GHL S NA AT Q IAN VT T EEAK Q QL LNI I A E QS E 674
Cdd:COG3887 628 GHL T NA GA Q LKD VT I EEAK E QL KEA I D E YL E 658
PRK14538
PRK14538 putative bifunctional signaling protein/50S ribosomal protein L9; Provisional
38-669
3.20e-108
putative bifunctional signaling protein/50S ribosomal protein L9; Provisional
Pssm-ID: 173004 [Multi-domain]
Cd Length: 838
Bit Score: 346.82
E-value: 3.20e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 38 ML FN I t F G L I W LAI V II GLVFSAQAFKEVS -- EDAQEYL S G L GYRIARSEQ E A L IRM PIGI I L LNQ - D K K I D W I NPY MQA 114
Cdd:PRK14538 56 FT FN F - L G K I I LAI L II SFLLNIKKNAQIK rl QNKLSLW S K L SFHVSQIGE E V L NEL PIGI V L IDI s S K E I Q W L NPY ANF 134
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 115 Y L DKRDV l GLE L SELDNKL A l EIDNYA D ASETNT IT WQGRQ F SL F VQQN L R V I YL MDIS E YAA I TKKYEDHQ L FSGL I SV 194
Cdd:PRK14538 135 I L KNPEI - NTP L AQINESM A - QLLLTS D KIPKTI IT LKNQK F EC F YKKD L N V F YL FNAT E KEQ I KHLFLQKT L ALAM I TF 212
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 195 DN Y EE VTDGMSE SE T S TLRTYVTR ALSD WALEHHI Y IRR L NTLHYVMFGYQSA L QEAE E D KFS V L KD IR EATAQQNSP VT 274
Cdd:PRK14538 213 DN L EE SLIRYDL SE Q S QIQGEYLS ALSD FIEPYEG Y LKQ L IDDRFLLLINRQN L DKMI E N KFS I L DT IR NISHKYQLK VT 292
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 275 LS V GIA YDDTDIN KLA KMA Q TNLD LA LG RGGDQ V VV KS E KAAARFY G GASNPME K RTR V R AR MVS Q TIAELMEQADNIM I 354
Cdd:PRK14538 293 LS M GIA CWNLSYD KLA TYS Q NAIE LA QK RGGDQ A VV NI E NEKIKYF G AKIASLS K QSK V N AR VNA Q NLVDILKKNPHCF I 372
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 355 V GH AMP DLD AV GS GLGVWRM A Q T KNK -- PAFLV LDE KHVYSDIQLLLAE L R K KPAE fvapgsn IDDS I VDEAR A L K LVRD 432
Cdd:PRK14538 373 M GH NHT DLD SL GS MIAFYKI A L T IHP dn NNYII LDE EKLDKSLTPVYHQ L I K QEHK ------- VTLN I ITTQQ A S K MIKK 445
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 433 N T L LVLV D HAKAS I SGA P Q LL E r L A N RVV VIDHHR LA E QGL de KPLM SY IEPY ASST S EL V VEL LQYQDQ s HAP IT KL E S 512
Cdd:PRK14538 446 N D L IAVL D TQTKD I VNS P E LL S - L T N NII VIDHHR AT E EII -- PSIF SY VDSS ASST V EL L VEL MGFLEK - EIH IT AF E A 521
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 513 TA M LG GI Q IDT KN F TL RT G SRTF DA AS Y L RAN GAD SNLIQ S FMKEK F SDFKSRSH L VNLA EI HEGN a I A VGDNKD IY SG - 591
Cdd:PRK14538 522 SI M YA GI L IDT NA F IY RT S SRTF EV AS K L KDL GAD AIEVK S WLRKD F DKVLEINK L ISKM EI FMDR - F A IIKSEE IY DN r 600
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 504091212 592 LLT AQ A A DEL L Q I SG V Y A S F V I T K RQ D GRVG ISARS TG E R NVQ RT ME ALG GGGHL SN AATQI ANVTTEEAK Q Q L LNII 669
Cdd:PRK14538 601 SFL AQ V A ESV L N I QN V D A A F M I A K IS D NTIA ISARS YN E I NVQ TI ME QME GGGHL NS AATQI KGTNIKTVT Q T L KHLL 678
NrnA
COG0618 nanoRNase/pAp phosphatase, hydrolyzes c-di-AMP and oligoRNAs [Nucleotide transport and ...
340-669
1.09e-52
nanoRNase/pAp phosphatase, hydrolyzes c-di-AMP and oligoRNAs [Nucleotide transport and metabolism, Signal transduction mechanisms];
Pssm-ID: 440383 [Multi-domain]
Cd Length: 312
Bit Score: 183.85
E-value: 1.09e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 340 QTI AEL MEQ AD N I M I VG H AM PD L DA V GS G L GVWRMAQTKN K PAFL V LDEK hvysdiql LLA EL R kkpae F VAPGSN I D ds 419
Cdd:COG0618 1 EEL AEL LKK AD R I L I LT H VN PD G DA L GS A L ALALLLRALG K EVTI V YPGE -------- IPH EL A ----- F LPGADE I V -- 65
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 420 ivdea R ALKLVRDNT L LVL VD HAKASIS G APQL L ERL A NR V V VIDHH rlae QGL D EKPLMSYIE P Y A SS TSE LVV ELL QY 499
Cdd:COG0618 66 ----- R LEDVDLEYD L VIV VD TSSPDRI G DLAE L LEK A KP V I VIDHH ---- PSN D DFGDFNDVD P D A GA TSE IIY ELL KE 136
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 500 QD qsh AP I TKLES TA MLG GI QI DT KN F TLR - T GS R T F D AA SY L RAN GAD SN LI QSFMKEKF S -- DF K SRSHLVNLA E IH E 576
Cdd:COG0618 137 LG --- IE I DPEIA TA LYT GI VT DT GS F RYS n T TP R D F R AA AE L LEK GAD LD LI ARILYPSL S le QL K LLGRALENL E VL E 213
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 577 GNAI A VGD - N K DIYSGLL ----- T AQAA D E LL Q I S GV YASF V ITKRQ DG RVGI S A RS T G ERN V QRTMEAL GGGGH l SN AA 650
Cdd:COG0618 214 DGKV A YSY l T K EDLEEFG atpdd T EGLV D Y LL S I E GV EVAV V FGEVE DG EIKV S L RS K G RVD V GEIAREF GGGGH - AR AA 292
330 340
....*....|....*....|
gi 504091212 651 T - Q I ANVTT EE AKQQ LL NII 669
Cdd:COG0618 293 G a T I PGLDL EE VVEK LL EAL 312
DHH
pfam01368 DHH family; It is predicted that this family of proteins all perform a phosphoesterase ...
351-519
5.61e-26
DHH family; It is predicted that this family of proteins all perform a phosphoesterase function. It included the single stranded DNA exonuclease RecJ.
Pssm-ID: 460177 [Multi-domain]
Cd Length: 145
Bit Score: 103.81
E-value: 5.61e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 351 N I M I V GH AM PD L D AV GS G LG VW R maqtknkpaflvldekhvysdiql L L A EL RKKPA E FVA P GSNIDDSIVDEARALK L V 430
Cdd:pfam01368 1 K I V I Y GH YN PD G D GI GS A LG LY R ------------------------ Y L K EL VGPDV E YYI P DRLEEGYGINPEAIEE L I 56
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 431 RDN TLL VL VD HAKA S IS G APQLL E r L ANR V V VIDHH RLAEQGL D EKPLMSYI EP Y ASSTSE L V VE LLQY QDQSHA - P I T K 509
Cdd:pfam01368 57 DFD TLL IT VD CGIK S VE G IELAK E - L GID V I VIDHH LPNDFLP D ADAIINPR EP P ASSTSE V V FK LLQY AYGEEG k E I D K 135
170
....*....|
gi 504091212 510 LESTAM L G GI 519
Cdd:pfam01368 136 ELADLL L L GI 145
PPX1
COG1227 Inorganic pyrophosphatase/exopolyphosphatase [Energy production and conversion];
350-526
1.39e-06
Inorganic pyrophosphatase/exopolyphosphatase [Energy production and conversion];
Pssm-ID: 440840 [Multi-domain]
Cd Length: 307
Bit Score: 50.54
E-value: 1.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 350 DN I MIV GH AM PD L D AVG S GLG vwr M A QT KN K paflv L D E KHV ysdi QLL L A E LRK k PAE FV apgsn I D DSI V DEARALKL 429
Cdd:COG1227 2 MK I LVF GH KN PD T D SIC S AIA --- Y A YL KN Q ----- L G E DAE ---- AVR L G E PNP - ETA FV ----- L D YFG V EAPELIED 63
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 430 V RDNTLLV LVDH AKAS isgap Q LLERL -- A NRVVV IDHHR LA eq GLD - EK PL MSY IEP YA s S T SELVVE L LQYQD qsh AP 506
Cdd:COG1227 64 V AAGKKVI LVDH NELA ----- Q SVDGI de A EILEI IDHHR IG -- DFE t AA PL YIR IEP VG - C T ATIIAK L YKENG --- VE 132
170 180
....*....|....*....|
gi 504091212 507 I T K LESTA ML GG I QI DT KN F 526
Cdd:COG1227 133 I P K EIAGL ML SA I LS DT LL F 152
DHHA1
pfam02272 DHHA1 domain; This domain is often found adjacent to the DHH domain pfam01368 and is called ...
541-669
4.89e-04
DHHA1 domain; This domain is often found adjacent to the DHH domain pfam01368 and is called DHHA1 for DHH associated domain. This domain is diagnostic of DHH subfamily 1 members. This domains is also found in alanyl tRNA synthetase, suggesting that this domain may have an RNA binding function. The domain is about 60 residues long and contains a conserved GG motif.
Pssm-ID: 396724 [Multi-domain]
Cd Length: 139
Bit Score: 40.89
E-value: 4.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 541 L RANGADSNLIQSFM --- KE KFSDF K SRSH L VNLA EI HEGNAIAVGDNKDIYS G L L t AQ AAD E L LQIS G VYASFVIT K RQ 617
Cdd:pfam02272 1 L ESLNEELKELEKEL eel KE ALALL K AKEL L EKAE EI NGVKVLVAEVGEGWDA G A L - GI AAD R L KKKL G DPVIVLVA K ED 79
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 618 DGR V GI SARS TGERN V -------- QRTMEAL GGGGH LSN A ATQ I ANVTTE EA KQQ L LNI I 669
Cdd:pfam02272 80 GDK V KV SARS SKDKG V dagellke VAAILGG GGGGH DLA A GAG I DAEKLD EA LEL L EEA I 139
CitA
COG3290 Sensor histidine kinase DipB regulating citrate/malate metabolism [Signal transduction ...
4-202
5.42e-03
Sensor histidine kinase DipB regulating citrate/malate metabolism [Signal transduction mechanisms];
Pssm-ID: 442519 [Multi-domain]
Cd Length: 389
Bit Score: 39.83
E-value: 5.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 4 FFSFKN L PIFFQNTK L STVAF LLL VSSVMSVIFAM L FNIT F G L IWLAIVIIG L VFSAQAFKEVSEDAQEY L SG L GYR IAR 83
Cdd:COG3290 2 LLLLLL L LLLLILLI L ILILL LLL LIILLLILLLV L LLLL F L L FVIILLLLL L ILLLILLLLLLLLLAAL L LK L LEE IAR 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504091212 84 SEQ E --- A L IRMPI G I I LLNQ D KK I DW IN PYMQAY L DK r D VL G LELS E LDNKL a LE IDNYADASET N TITWQGRQFSLFV 160
Cdd:COG3290 82 LVE E rea V L ESIRE G V I AVDR D GR I TL IN DAARRL L GL - D AI G RPID E VLAEV - LE TGERDEEILL N GRVLVVNRVPIRD 159
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 504091212 161 QQNL -- R V IYLM D IS E YAAITKKY E DHQLF ------------------ SGL ISVDN Y E E VTD 202
Cdd:COG3290 160 DGRV vg A V ATFR D RT E LERLEEEL E GVKEL aealraqrhdfrnhlhti SGL LQLGE Y D E ALE 221
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
