glycoside hydrolase family 99-like domain-containing protein is typically found within O-antigen biosynthesis clusters and bears resemblance to the GH71/GH99 family of alpha-1,2-mannosidases
Glycosyl hydrolase family 99-like domain of WbsX-like glycosyltransferases; Members of this ...
3-357
0e+00
Glycosyl hydrolase family 99-like domain of WbsX-like glycosyltransferases; Members of this domain family are found in proteins within O-antigen biosynthesis clusters in Gram negative bacteria, where they may function as glycosyl hydrolases and typically co-occur with glycosyltransferase domains. They bear resemblance to GH71 and the GH99 family of alpha-1,2-mannosidases and may share a similar cataltyic site and mechanism. The O-antigens are essential lipopolysaccharides in gram-negative bacteria's outer membrane and have been linked to pathogenicity.
:
Pssm-ID: 211420 [Multi-domain] Cd Length: 347 Bit Score: 509.39 E-value: 0e+00
Glycosyl hydrolase family 99-like domain of WbsX-like glycosyltransferases; Members of this ...
3-357
0e+00
Glycosyl hydrolase family 99-like domain of WbsX-like glycosyltransferases; Members of this domain family are found in proteins within O-antigen biosynthesis clusters in Gram negative bacteria, where they may function as glycosyl hydrolases and typically co-occur with glycosyltransferase domains. They bear resemblance to GH71 and the GH99 family of alpha-1,2-mannosidases and may share a similar cataltyic site and mechanism. The O-antigens are essential lipopolysaccharides in gram-negative bacteria's outer membrane and have been linked to pathogenicity.
Pssm-ID: 211420 [Multi-domain] Cd Length: 347 Bit Score: 509.39 E-value: 0e+00
Glycosyltransferase WbsX; Members of this family are found in within O-antigen biosynthesis ...
4-352
3.94e-180
Glycosyltransferase WbsX; Members of this family are found in within O-antigen biosynthesis clusters in Gram negative bacteria, where they are predicted to function as glycosyltransferases.
Pssm-ID: 464132 [Multi-domain] Cd Length: 311 Bit Score: 501.26 E-value: 3.94e-180
Glycosyl hydrolase family 99-like domain of WbsX-like glycosyltransferases; Members of this ...
3-357
0e+00
Glycosyl hydrolase family 99-like domain of WbsX-like glycosyltransferases; Members of this domain family are found in proteins within O-antigen biosynthesis clusters in Gram negative bacteria, where they may function as glycosyl hydrolases and typically co-occur with glycosyltransferase domains. They bear resemblance to GH71 and the GH99 family of alpha-1,2-mannosidases and may share a similar cataltyic site and mechanism. The O-antigens are essential lipopolysaccharides in gram-negative bacteria's outer membrane and have been linked to pathogenicity.
Pssm-ID: 211420 [Multi-domain] Cd Length: 347 Bit Score: 509.39 E-value: 0e+00
Glycosyltransferase WbsX; Members of this family are found in within O-antigen biosynthesis ...
4-352
3.94e-180
Glycosyltransferase WbsX; Members of this family are found in within O-antigen biosynthesis clusters in Gram negative bacteria, where they are predicted to function as glycosyltransferases.
Pssm-ID: 464132 [Multi-domain] Cd Length: 311 Bit Score: 501.26 E-value: 3.94e-180
Glycoside hydrolase families 71, 99, and related domains; This superfamily of glycoside ...
42-346
2.49e-12
Glycoside hydrolase families 71, 99, and related domains; This superfamily of glycoside hydrolases contains families GH71 and GH99 (following the CAZY nomenclature), as well as other members with undefined function and specificity.
Pssm-ID: 211414 Cd Length: 284 Bit Score: 66.36 E-value: 2.49e-12
Uncharacterized glycoside hydrolase family 99-like domain; This family of putative glycoside ...
316-354
1.67e-03
Uncharacterized glycoside hydrolase family 99-like domain; This family of putative glycoside hydrolases resembles glycosyl hydrolase families 71 and 99 (following the CAZY nomenclature) and may share a similar catalytic site and mechanism.
Pssm-ID: 211416 Cd Length: 376 Bit Score: 40.01 E-value: 1.67e-03
Uncharacterized glycoside hydrolase family 99-like domain; This family of putative glycoside ...
306-354
4.98e-03
Uncharacterized glycoside hydrolase family 99-like domain; This family of putative glycoside hydrolases resembles glycosyl hydrolase families 71 and 99 (following the CAZY nomenclature) and may share a similar catalytic site and mechanism.
Pssm-ID: 211419 Cd Length: 313 Bit Score: 38.55 E-value: 4.98e-03
Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
References:
Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
of the residues that compose this conserved feature have been mapped to the query sequence.
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Functional characterization of the conserved domain architecture found on the query.
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This image shows a graphical summary of conserved domains identified on the query sequence.
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if a domain or superfamily has been annotated with functional sites (conserved features),
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click on the bars or triangles to view your query sequence embedded in a multiple sequence alignment of the proteins used to develop the corresponding domain model.
The table lists conserved domains identified on the query sequence. Click on the plus sign (+) on the left to display full descriptions, alignments, and scores.
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(labeled illustration) Standard Display shows only the best scoring domain model from each source, in each hit category listed below for each region on the query sequence.
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