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Conserved domains on  [gi|504275013|ref|WP_014462115|]
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MULTISPECIES: spore coat protein [Bacillaceae]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CotW super family cl47453
Spore coat protein CotW (outer spore coat) [Cell cycle control, cell division, chromosome ...
 1-70 7.71e-08

Spore coat protein CotW (outer spore coat) [Cell cycle control, cell division, chromosome partitioning];


The actual alignment was detected with superfamily member COG5887:

Pssm-ID: 444589  Cd Length: 81  Bit Score: 44.45  E-value: 7.71e-08
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 504275013  1 MSDSPKKPEI--VPNKLMDLLVNDVFSKHGIDKEKIKgNLSEEKKQMLKEMVEDLSKRVDEFVKQTNATNKK 70
Cdd:COG5887   1 MSDNDKKEFKadLPDPMLELLVDDIFKKHGVTEDKVK-NLSDEEKQMIRNLVKDLQSQVDTFLDNQKKRINK 71
 
Name Accession Description Interval E-value
CotW COG5887
Spore coat protein CotW (outer spore coat) [Cell cycle control, cell division, chromosome ...
 1-70 7.71e-08

Spore coat protein CotW (outer spore coat) [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444589  Cd Length: 81  Bit Score: 44.45  E-value: 7.71e-08
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 504275013  1 MSDSPKKPEI--VPNKLMDLLVNDVFSKHGIDKEKIKgNLSEEKKQMLKEMVEDLSKRVDEFVKQTNATNKK 70
Cdd:COG5887   1 MSDNDKKEFKadLPDPMLELLVDDIFKKHGVTEDKVK-NLSDEEKQMIRNLVKDLQSQVDTFLDNQKKRINK 71
DUF1844 pfam08899
Domain of unknown function (DUF1844); This family of proteins are functionally uncharacterized.
 26-53 3.58e-04

Domain of unknown function (DUF1844); This family of proteins are functionally uncharacterized.


Pssm-ID: 430299  Cd Length: 76  Bit Score: 34.80  E-value: 3.58e-04
                         10        20        30
                 ....*....|....*....|....*....|...
gi 504275013  26 KHGID-----KEKIKGNLSEEKKQMLKEMVEDL 53
Cdd:pfam08899 38 RQTIDllamlQEKTKGNLDEEEARLLEDALYEL 70
 
Name Accession Description Interval E-value
CotW COG5887
Spore coat protein CotW (outer spore coat) [Cell cycle control, cell division, chromosome ...
 1-70 7.71e-08

Spore coat protein CotW (outer spore coat) [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444589  Cd Length: 81  Bit Score: 44.45  E-value: 7.71e-08
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 504275013  1 MSDSPKKPEI--VPNKLMDLLVNDVFSKHGIDKEKIKgNLSEEKKQMLKEMVEDLSKRVDEFVKQTNATNKK 70
Cdd:COG5887   1 MSDNDKKEFKadLPDPMLELLVDDIFKKHGVTEDKVK-NLSDEEKQMIRNLVKDLQSQVDTFLDNQKKRINK 71
DUF1844 pfam08899
Domain of unknown function (DUF1844); This family of proteins are functionally uncharacterized.
 26-53 3.58e-04

Domain of unknown function (DUF1844); This family of proteins are functionally uncharacterized.


Pssm-ID: 430299  Cd Length: 76  Bit Score: 34.80  E-value: 3.58e-04
                         10        20        30
                 ....*....|....*....|....*....|...
gi 504275013  26 KHGID-----KEKIKGNLSEEKKQMLKEMVEDL 53
Cdd:pfam08899 38 RQTIDllamlQEKTKGNLDEEEARLLEDALYEL 70
COG5283 COG5283
Phage-related tail protein [Mobilome: prophages, transposons];
22-71 8.23e-03

Phage-related tail protein [Mobilome: prophages, transposons];


Pssm-ID: 444094 [Multi-domain]  Cd Length: 747  Bit Score: 32.90  E-value: 8.23e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 504275013  22 DVFSKHGIDKEKIKGNLSEEKKQMLKEMVEDLSKRVDEFVKQTNATNKKK 71
Cdd:COG5283  327 KALKKLGIDTQDSKGNLRGLAKILAKQMQKDAQGALAELLKALKKLDAAK 376
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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