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Conserved domains on  [gi|504427289|ref|WP_014614391|]
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CoA-disulfide reductase [Staphylococcus pseudintermedius]

Protein Classification

CoA-disulfide reductase( domain architecture ID 11486667)

CoA-disulfide reductase catalyzes specifically the NADPH-dependent reduction of coenzyme A disulfide

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK13512 PRK13512
coenzyme A disulfide reductase; Provisional
1-439 0e+00

coenzyme A disulfide reductase; Provisional


:

Pssm-ID: 184103 [Multi-domain]  Cd Length: 438  Bit Score: 750.07  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289   1 MKKhIIVVGAVAGGATSASQIRRLDKDSRITVYEKDSFMSFANCGLPYYLGNVIEERDDILSTNPEKFKAYKDIDVKVKH 80
Cdd:PRK13512   1 MPK-IIVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYYIGEVVEDRKYALAYTPEKFYDRKQITVKTYH 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  81 EVLKIDDKKQTVTVKNHFTGETFEDAYDALVLSPGARASQLNFDVPHLFTLRNMDDTDQIDTYIRQYNVKTVLIVGAGYV 160
Cdd:PRK13512  80 EVIAINDERQTVTVLNRKTNEQFEESYDKLILSPGASANSLGFESDITFTLRNLEDTDAIDQFIKANQVDKALVVGAGYI 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 161 SLEMVENMHHRGLHPTLIHRSEAVNKLMDQDMNSVIFDALNQYNIPYRLNEEIKSIDGHTVTFTSGAVEDYDLIIAGVGV 240
Cdd:PRK13512 160 SLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEIDAINGNEVTFKSGKVEHYDMIIEGVGT 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 241 RPNSEFIQNSGIQLDAKGYIPVNDKFETNIPNIYAVGDIVTSFYRHVDLPAHVPLAWGAHRGASIIAEQIAGHPEVTFKG 320
Cdd:PRK13512 240 HPNSKFIESSNIKLDDKGFIPVNDKFETNVPNIYAIGDIITSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKG 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 321 YVGANIVKFFDYTLASTGISPQELKNFDYQMVEVNLYTHAGYYPGNSKVHLRAYFDKETRRILRAAAVGQKDVDKRIDVL 400
Cdd:PRK13512 320 FLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHANYYPGNSPLHLRVYYDTSNRKILRAAAVGKEGADKRIDVL 399
                        410       420       430
                 ....*....|....*....|....*....|....*....
gi 504427289 401 TMALMHQATIDELTEFEVAYAPPFAHPKDLINMLGYKAR 439
Cdd:PRK13512 400 SMAMMNQLTVDELTEFEVAYAPPYSHPKDLINMIGYKAK 438
 
Name Accession Description Interval E-value
PRK13512 PRK13512
coenzyme A disulfide reductase; Provisional
1-439 0e+00

coenzyme A disulfide reductase; Provisional


Pssm-ID: 184103 [Multi-domain]  Cd Length: 438  Bit Score: 750.07  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289   1 MKKhIIVVGAVAGGATSASQIRRLDKDSRITVYEKDSFMSFANCGLPYYLGNVIEERDDILSTNPEKFKAYKDIDVKVKH 80
Cdd:PRK13512   1 MPK-IIVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYYIGEVVEDRKYALAYTPEKFYDRKQITVKTYH 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  81 EVLKIDDKKQTVTVKNHFTGETFEDAYDALVLSPGARASQLNFDVPHLFTLRNMDDTDQIDTYIRQYNVKTVLIVGAGYV 160
Cdd:PRK13512  80 EVIAINDERQTVTVLNRKTNEQFEESYDKLILSPGASANSLGFESDITFTLRNLEDTDAIDQFIKANQVDKALVVGAGYI 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 161 SLEMVENMHHRGLHPTLIHRSEAVNKLMDQDMNSVIFDALNQYNIPYRLNEEIKSIDGHTVTFTSGAVEDYDLIIAGVGV 240
Cdd:PRK13512 160 SLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEIDAINGNEVTFKSGKVEHYDMIIEGVGT 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 241 RPNSEFIQNSGIQLDAKGYIPVNDKFETNIPNIYAVGDIVTSFYRHVDLPAHVPLAWGAHRGASIIAEQIAGHPEVTFKG 320
Cdd:PRK13512 240 HPNSKFIESSNIKLDDKGFIPVNDKFETNVPNIYAIGDIITSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKG 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 321 YVGANIVKFFDYTLASTGISPQELKNFDYQMVEVNLYTHAGYYPGNSKVHLRAYFDKETRRILRAAAVGQKDVDKRIDVL 400
Cdd:PRK13512 320 FLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHANYYPGNSPLHLRVYYDTSNRKILRAAAVGKEGADKRIDVL 399
                        410       420       430
                 ....*....|....*....|....*....|....*....
gi 504427289 401 TMALMHQATIDELTEFEVAYAPPFAHPKDLINMLGYKAR 439
Cdd:PRK13512 400 SMAMMNQLTVDELTEFEVAYAPPYSHPKDLINMIGYKAK 438
CoA_CoA_reduc TIGR03385
CoA-disulfide reductase; Members of this protein family are CoA-disulfide reductase (EC 1.8.1. ...
16-435 0e+00

CoA-disulfide reductase; Members of this protein family are CoA-disulfide reductase (EC 1.8.1.14), as characterized in Staphylococcus aureus, Pyrococcus horikoshii, and Borrelia burgdorferi, and inferred in several other species on the basis of high levels of CoA and an absence of glutathione as a protective thiol. [Cellular processes, Detoxification]


Pssm-ID: 163244 [Multi-domain]  Cd Length: 427  Bit Score: 558.97  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289   16 TSASQIRRLDKDSRITVYEKDSFMSFANCGLPYYLGNVIEERDDILSTNPEKFKAYKDIDVKVKHEVLKIDDKKQTVTVK 95
Cdd:TIGR03385   1 SAASRVRRLDKESDIIVFEKTEDVSFANCGLPYVIGGVIDDRNKLLAYTPEVFIKKRGIDVKTNHEVIEVNDERQTVVVR 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289   96 NHFTGETFEDAYDALVLSPGARASQLNF---DVPHLFTLRNMDDTDQIDTYIRQYNVKTVLIVGAGYVSLEMVENMHHRG 172
Cdd:TIGR03385  81 NNKTNETYEESYDYLILSPGASPIVPNIegiNLDIVFTLRNLEDTDAIKQYIDKNKVENVVIIGGGYIGIEMAEALRERG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  173 LHPTLIHRSEAV-NKLMDQDMNSVIFDALNQYNIPYRLNEEIKSIDGH--TVTFTSGAVEDYDLIIAGVGVRPNSEFIQN 249
Cdd:TIGR03385 161 KNVTLIHRSERIlNKLFDEEMNQIVEEELKKHEINLRLNEEVDSIEGEerVKVFTSGGVYQADMVILATGIKPNSELAKD 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  250 SGIQLDAKGYIPVNDKFETNIPNIYAVGDIVTSFYRHVDLPAHVPLAWGAHRGASIIAEQIAGHpEVTFKGYVGANIVKF 329
Cdd:TIGR03385 241 SGLKLGETGAIWVNEKFQTSVPNIYAAGDVAESHNIITKKPAWVPLAWGANKMGRIAGENIAGN-DIEFKGVLGTNITKF 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  330 FDYTLASTGISPQELK--NFDYQMVEVNLYTHAGYYPGNSKVHLRAYFDKETRRILRAAAVGQKDVDKRIDVLTMALMHQ 407
Cdd:TIGR03385 320 FDLTIASTGVTENEAKklNIDYKTVFVKAKTHANYYPGNSPLHLKLIYEKDTRRILGAQAVGKEGADKRIDVLAAAIMAG 399
                         410       420
                  ....*....|....*....|....*...
gi 504427289  408 ATIDELTEFEVAYAPPFAHPKDLINMLG 435
Cdd:TIGR03385 400 LTVKDLFFFELAYAPPYSRVWDPLNMAG 427
FadH2 COG0446
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ...
23-338 3.06e-107

NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];


Pssm-ID: 440215 [Multi-domain]  Cd Length: 322  Bit Score: 319.83  E-value: 3.06e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  23 RLDKDSRITVYEKDSFMSFANCGLPYYLGNVIEERDDILSTNPEKFKAYkDIDVKVKHEVLKIDDKKQTVTVKnhfTGET 102
Cdd:COG0446    1 RLGPDAEITVIEKGPHHSYQPCGLPYYVGGGIKDPEDLLVRTPESFERK-GIDVRTGTEVTAIDPEAKTVTLR---DGET 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 103 FedAYDALVLSPGARASQLNF---DVPHLFTLRNMDDTDQIDTYIRQYNVKTVLIVGAGYVSLEMVENMHHRGLHPTLIH 179
Cdd:COG0446   77 L--SYDKLVLATGARPRPPPIpglDLPGVFTLRTLDDADALREALKEFKGKRAVVIGGGPIGLELAEALRKRGLKVTLVE 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 180 RSEAVNKLMDQDMNSVIFDALNQYNIPYRLNEEIKSIDGH---TVTFTSGAVEDYDLIIAGVGVRPNSEFIQNSGIQLDA 256
Cdd:COG0446  155 RAPRLLGVLDPEMAALLEEELREHGVELRLGETVVAIDGDdkvAVTLTDGEEIPADLVVVAPGVRPNTELAKDAGLALGE 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 257 KGYIPVNDKFETNIPNIYAVGDIVTSFYRHVDLPAHVPLAWGAHRGASIIAEQIAGHPEvTFKGyVGANIVKFFDYTLAS 336
Cdd:COG0446  235 RGWIKVDETLQTSDPDVYAAGDCAEVPHPVTGKTVYIPLASAANKQGRVAAENILGGPA-PFPG-LGTFISKVFDLCIAS 312

                 ..
gi 504427289 337 TG 338
Cdd:COG0446  313 TG 314
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
3-298 4.39e-48

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 166.72  E-value: 4.39e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289    3 KHIIVVGAVAGGATSASQIRRLDKdsRITVYEKDSFMSFANCGLPYYLGNVIEERDDILST-------NPEKFKAYKDID 75
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQLGG--KVTLIEDEGTCPYGGCVLSKALLGAAEAPEIASLWadlykrkEEVVKKLNNGIE 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289   76 VKVKHEVLKIDDKKQTVTVKNHFTGETFEDAYDALVLSPGARASQLN---FDVPHLFTLRNMDDTDqidtYIRQYNV-KT 151
Cdd:pfam07992  79 VLLGTEVVSIDPGAKKVVLEELVDGDGETITYDRLVIATGARPRLPPipgVELNVGFLVRTLDSAE----ALRLKLLpKR 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  152 VLIVGAGYVSLEMVENMHHRGLHPTLIHRSEAVNKLMDQDMNSVIFDALNQYNIPYRLNEEIKSI----DGHTVTFTSGA 227
Cdd:pfam07992 155 VVVVGGGYIGVELAAALAKLGKEVTLIEALDRLLRAFDEEISAALEKALEKNGVEVRLGTSVKEIigdgDGVEVILKDGT 234
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 504427289  228 VEDYDLIIAGVGVRPNSEFIQNSGIQLDAKGYIPVNDKFETNIPNIYAVGDIvtsfyrHVDLPAHVPLAWG 298
Cdd:pfam07992 235 EIDADLVVVAIGRRPNTELLEAAGLELDERGGIVVDEYLRTSVPGIYAAGDC------RVGGPELAQNAVA 299
 
Name Accession Description Interval E-value
PRK13512 PRK13512
coenzyme A disulfide reductase; Provisional
1-439 0e+00

coenzyme A disulfide reductase; Provisional


Pssm-ID: 184103 [Multi-domain]  Cd Length: 438  Bit Score: 750.07  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289   1 MKKhIIVVGAVAGGATSASQIRRLDKDSRITVYEKDSFMSFANCGLPYYLGNVIEERDDILSTNPEKFKAYKDIDVKVKH 80
Cdd:PRK13512   1 MPK-IIVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYYIGEVVEDRKYALAYTPEKFYDRKQITVKTYH 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  81 EVLKIDDKKQTVTVKNHFTGETFEDAYDALVLSPGARASQLNFDVPHLFTLRNMDDTDQIDTYIRQYNVKTVLIVGAGYV 160
Cdd:PRK13512  80 EVIAINDERQTVTVLNRKTNEQFEESYDKLILSPGASANSLGFESDITFTLRNLEDTDAIDQFIKANQVDKALVVGAGYI 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 161 SLEMVENMHHRGLHPTLIHRSEAVNKLMDQDMNSVIFDALNQYNIPYRLNEEIKSIDGHTVTFTSGAVEDYDLIIAGVGV 240
Cdd:PRK13512 160 SLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEIDAINGNEVTFKSGKVEHYDMIIEGVGT 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 241 RPNSEFIQNSGIQLDAKGYIPVNDKFETNIPNIYAVGDIVTSFYRHVDLPAHVPLAWGAHRGASIIAEQIAGHPEVTFKG 320
Cdd:PRK13512 240 HPNSKFIESSNIKLDDKGFIPVNDKFETNVPNIYAIGDIITSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKG 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 321 YVGANIVKFFDYTLASTGISPQELKNFDYQMVEVNLYTHAGYYPGNSKVHLRAYFDKETRRILRAAAVGQKDVDKRIDVL 400
Cdd:PRK13512 320 FLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHANYYPGNSPLHLRVYYDTSNRKILRAAAVGKEGADKRIDVL 399
                        410       420       430
                 ....*....|....*....|....*....|....*....
gi 504427289 401 TMALMHQATIDELTEFEVAYAPPFAHPKDLINMLGYKAR 439
Cdd:PRK13512 400 SMAMMNQLTVDELTEFEVAYAPPYSHPKDLINMIGYKAK 438
CoA_CoA_reduc TIGR03385
CoA-disulfide reductase; Members of this protein family are CoA-disulfide reductase (EC 1.8.1. ...
16-435 0e+00

CoA-disulfide reductase; Members of this protein family are CoA-disulfide reductase (EC 1.8.1.14), as characterized in Staphylococcus aureus, Pyrococcus horikoshii, and Borrelia burgdorferi, and inferred in several other species on the basis of high levels of CoA and an absence of glutathione as a protective thiol. [Cellular processes, Detoxification]


Pssm-ID: 163244 [Multi-domain]  Cd Length: 427  Bit Score: 558.97  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289   16 TSASQIRRLDKDSRITVYEKDSFMSFANCGLPYYLGNVIEERDDILSTNPEKFKAYKDIDVKVKHEVLKIDDKKQTVTVK 95
Cdd:TIGR03385   1 SAASRVRRLDKESDIIVFEKTEDVSFANCGLPYVIGGVIDDRNKLLAYTPEVFIKKRGIDVKTNHEVIEVNDERQTVVVR 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289   96 NHFTGETFEDAYDALVLSPGARASQLNF---DVPHLFTLRNMDDTDQIDTYIRQYNVKTVLIVGAGYVSLEMVENMHHRG 172
Cdd:TIGR03385  81 NNKTNETYEESYDYLILSPGASPIVPNIegiNLDIVFTLRNLEDTDAIKQYIDKNKVENVVIIGGGYIGIEMAEALRERG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  173 LHPTLIHRSEAV-NKLMDQDMNSVIFDALNQYNIPYRLNEEIKSIDGH--TVTFTSGAVEDYDLIIAGVGVRPNSEFIQN 249
Cdd:TIGR03385 161 KNVTLIHRSERIlNKLFDEEMNQIVEEELKKHEINLRLNEEVDSIEGEerVKVFTSGGVYQADMVILATGIKPNSELAKD 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  250 SGIQLDAKGYIPVNDKFETNIPNIYAVGDIVTSFYRHVDLPAHVPLAWGAHRGASIIAEQIAGHpEVTFKGYVGANIVKF 329
Cdd:TIGR03385 241 SGLKLGETGAIWVNEKFQTSVPNIYAAGDVAESHNIITKKPAWVPLAWGANKMGRIAGENIAGN-DIEFKGVLGTNITKF 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  330 FDYTLASTGISPQELK--NFDYQMVEVNLYTHAGYYPGNSKVHLRAYFDKETRRILRAAAVGQKDVDKRIDVLTMALMHQ 407
Cdd:TIGR03385 320 FDLTIASTGVTENEAKklNIDYKTVFVKAKTHANYYPGNSPLHLKLIYEKDTRRILGAQAVGKEGADKRIDVLAAAIMAG 399
                         410       420
                  ....*....|....*....|....*...
gi 504427289  408 ATIDELTEFEVAYAPPFAHPKDLINMLG 435
Cdd:TIGR03385 400 LTVKDLFFFELAYAPPYSRVWDPLNMAG 427
PRK09564 PRK09564
coenzyme A disulfide reductase; Reviewed
3-439 2.56e-113

coenzyme A disulfide reductase; Reviewed


Pssm-ID: 181958 [Multi-domain]  Cd Length: 444  Bit Score: 340.09  E-value: 2.56e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289   3 KHIIVVGAVAGGATSASQIRRLDKDSRITVYEKDSFMSFANCGLPYYLGNVIEERDDILSTNPEKFKAyKDIDVKVKHEV 82
Cdd:PRK09564   1 MKIIIIGGTAAGMSAAAKAKRLNKELEITVYEKTDIVSFGACGLPYFVGGFFDDPNTMIARTPEEFIK-SGIDVKTEHEV 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  83 LKIDDKKQTVTVKNHFTGETFEDAYDALVLSPGARA---SQLNFDVPHLFTLRNMDDTDQIDTYIRQYNVKTVLIVGAGY 159
Cdd:PRK09564  80 VKVDAKNKTITVKNLKTGSIFNDTYDKLMIATGARPiipPIKNINLENVYTLKSMEDGLALKELLKDEEIKNIVIIGAGF 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 160 VSLEMVENMHHRGLHPTLIHRSEAV-NKLMDQDMNSVIFDALNQYNIPYRLNEEIKSIDGH---TVTFTSGAVEDYDLII 235
Cdd:PRK09564 160 IGLEAVEAAKHLGKNVRIIQLEDRIlPDSFDKEITDVMEEELRENGVELHLNEFVKSLIGEdkvEGVVTDKGEYEADVVI 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 236 AGVGVRPNSEFIQNSGIQLDAKGYIPVNDKFETNIPNIYAVGDIVTSFYRHVDLPAHVPLAWGAHRGASIIAEQIAGHpE 315
Cdd:PRK09564 240 VATGVKPNTEFLEDTGLKTLKNGAIIVDEYGETSIENIYAAGDCATIYNIVSNKNVYVPLATTANKLGRMVGENLAGR-H 318
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 316 VTFKGYVGANIVKFFDYTLASTGISPQELK--NFDYQMVEVNLYTHAGYYPGNSKVHLRAYFDKETRRILRAAAVGQKDV 393
Cdd:PRK09564 319 VSFKGTLGSACIKVLDLEAARTGLTEEEAKklGIDYKTVFIKDKNHTNYYPGQEDLYVKLIYEADTKVILGGQIIGKKGA 398
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*.
gi 504427289 394 DKRIDVLTMALMHQATIDELTEFEVAYAPPFAHPKDLINMLGYKAR 439
Cdd:PRK09564 399 VLRIDALAVAIYAKLTTQELGMMDFCYAPPFARTWDALNVAGNVAK 444
FadH2 COG0446
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ...
23-338 3.06e-107

NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];


Pssm-ID: 440215 [Multi-domain]  Cd Length: 322  Bit Score: 319.83  E-value: 3.06e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  23 RLDKDSRITVYEKDSFMSFANCGLPYYLGNVIEERDDILSTNPEKFKAYkDIDVKVKHEVLKIDDKKQTVTVKnhfTGET 102
Cdd:COG0446    1 RLGPDAEITVIEKGPHHSYQPCGLPYYVGGGIKDPEDLLVRTPESFERK-GIDVRTGTEVTAIDPEAKTVTLR---DGET 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 103 FedAYDALVLSPGARASQLNF---DVPHLFTLRNMDDTDQIDTYIRQYNVKTVLIVGAGYVSLEMVENMHHRGLHPTLIH 179
Cdd:COG0446   77 L--SYDKLVLATGARPRPPPIpglDLPGVFTLRTLDDADALREALKEFKGKRAVVIGGGPIGLELAEALRKRGLKVTLVE 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 180 RSEAVNKLMDQDMNSVIFDALNQYNIPYRLNEEIKSIDGH---TVTFTSGAVEDYDLIIAGVGVRPNSEFIQNSGIQLDA 256
Cdd:COG0446  155 RAPRLLGVLDPEMAALLEEELREHGVELRLGETVVAIDGDdkvAVTLTDGEEIPADLVVVAPGVRPNTELAKDAGLALGE 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 257 KGYIPVNDKFETNIPNIYAVGDIVTSFYRHVDLPAHVPLAWGAHRGASIIAEQIAGHPEvTFKGyVGANIVKFFDYTLAS 336
Cdd:COG0446  235 RGWIKVDETLQTSDPDVYAAGDCAEVPHPVTGKTVYIPLASAANKQGRVAAENILGGPA-PFPG-LGTFISKVFDLCIAS 312

                 ..
gi 504427289 337 TG 338
Cdd:COG0446  313 TG 314
NirB COG1251
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
2-339 5.70e-63

NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];


Pssm-ID: 440863 [Multi-domain]  Cd Length: 402  Bit Score: 208.46  E-value: 5.70e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289   2 KKHIIVVGAVAGGATSASQIRRLDKDSRITVYEKDSFMSFANCGLPYYLGNVIEERDdiLSTNPEKFKAYKDIDVKVKHE 81
Cdd:COG1251    1 KMRIVIIGAGMAGVRAAEELRKLDPDGEITVIGAEPHPPYNRPPLSKVLAGETDEED--LLLRPADFYEENGIDLRLGTR 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  82 VLKIDDKKQTVTVKNhftGETFedAYDALVLSPGARASQLNF---DVPHLFTLRNMDDTDQIDTYIRQynVKTVLIVGAG 158
Cdd:COG1251   79 VTAIDRAARTVTLAD---GETL--PYDKLVLATGSRPRVPPIpgaDLPGVFTLRTLDDADALRAALAP--GKRVVVIGGG 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 159 YVSLEMVENMHHRGLHPTLIHRSEAV-NKLMDQDMNSVIFDALNQYNIPYRLNEEIKSIDG----HTVTFTSGAVEDYDL 233
Cdd:COG1251  152 LIGLEAAAALRKRGLEVTVVERAPRLlPRQLDEEAGALLQRLLEALGVEVRLGTGVTEIEGddrvTGVRLADGEELPADL 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 234 IIAGVGVRPNSEFIQNSGIQLDaKGyIPVNDKFETNIPNIYAVGDIVTSFYRHVDLP--AHVPLAWgahRGASIIAEQIA 311
Cdd:COG1251  232 VVVAIGVRPNTELARAAGLAVD-RG-IVVDDYLRTSDPDIYAAGDCAEHPGPVYGRRvlELVAPAY---EQARVAAANLA 306
                        330       340
                 ....*....|....*....|....*...
gi 504427289 312 GHPEvTFKGYVGANIVKFFDYTLASTGI 339
Cdd:COG1251  307 GGPA-AYEGSVPSTKLKVFGVDVASAGD 333
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
3-298 4.39e-48

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 166.72  E-value: 4.39e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289    3 KHIIVVGAVAGGATSASQIRRLDKdsRITVYEKDSFMSFANCGLPYYLGNVIEERDDILST-------NPEKFKAYKDID 75
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQLGG--KVTLIEDEGTCPYGGCVLSKALLGAAEAPEIASLWadlykrkEEVVKKLNNGIE 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289   76 VKVKHEVLKIDDKKQTVTVKNHFTGETFEDAYDALVLSPGARASQLN---FDVPHLFTLRNMDDTDqidtYIRQYNV-KT 151
Cdd:pfam07992  79 VLLGTEVVSIDPGAKKVVLEELVDGDGETITYDRLVIATGARPRLPPipgVELNVGFLVRTLDSAE----ALRLKLLpKR 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  152 VLIVGAGYVSLEMVENMHHRGLHPTLIHRSEAVNKLMDQDMNSVIFDALNQYNIPYRLNEEIKSI----DGHTVTFTSGA 227
Cdd:pfam07992 155 VVVVGGGYIGVELAAALAKLGKEVTLIEALDRLLRAFDEEISAALEKALEKNGVEVRLGTSVKEIigdgDGVEVILKDGT 234
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 504427289  228 VEDYDLIIAGVGVRPNSEFIQNSGIQLDAKGYIPVNDKFETNIPNIYAVGDIvtsfyrHVDLPAHVPLAWG 298
Cdd:pfam07992 235 EIDADLVVVAIGRRPNTELLEAAGLELDERGGIVVDEYLRTSVPGIYAAGDC------RVGGPELAQNAVA 299
Ndh COG1252
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
2-338 1.48e-39

NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];


Pssm-ID: 440864 [Multi-domain]  Cd Length: 386  Bit Score: 146.05  E-value: 1.48e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289   2 KKHIIVVGAVAGGATSASQIRR-LDKDSRITVYEKDSFMSFANcGLPYYLGNVIEERDDILSTNpekfKAYKDIDVKVKH 80
Cdd:COG1252    1 MKRIVIVGGGFAGLEAARRLRKkLGGDAEVTLIDPNPYHLFQP-LLPEVAAGTLSPDDIAIPLR----ELLRRAGVRFIQ 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  81 -EVLKIDDKKQTVTVKNhftGETFEdaYDALVLSPGARASqlNFDVP----HLFTLRNMDDT----DQIDTYIRQYNVK- 150
Cdd:COG1252   76 gEVTGIDPEARTVTLAD---GRTLS--YDYLVIATGSVTN--FFGIPglaeHALPLKTLEDAlalrERLLAAFERAERRr 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 151 --TVLIVGAGYVSLEMVENMHH--------RGLHP-----TLIHRSEAVNKLMDQDMNSVIFDALNQYNIPYRLNEEIKS 215
Cdd:COG1252  149 llTIVVVGGGPTGVELAGELAEllrkllryPGIDPdkvriTLVEAGPRILPGLGEKLSEAAEKELEKRGVEVHTGTRVTE 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 216 IDGHTVTFTSGAVEDYDLIIAGVGVRPNsEFIQNSGIQLDAKGYIPVNDKFET-NIPNIYAVGDIVTsfYRHVDLPAHVP 294
Cdd:COG1252  229 VDADGVTLEDGEEIPADTVIWAAGVKAP-PLLADLGLPTDRRGRVLVDPTLQVpGHPNVFAIGDCAA--VPDPDGKPVPK 305
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*....
gi 504427289 295 LAWGAHRGASIIAEQIA----GHPEVTFkgyvganivKFFDY-TLASTG 338
Cdd:COG1252  306 TAQAAVQQAKVLAKNIAallrGKPLKPF---------RYRDKgCLASLG 345
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
150-427 2.11e-33

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 130.59  E-value: 2.11e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 150 KTVLIVGAGYVSLEMVeNMHHR-GLHPTLIHRSEAVNKLMDQDMNSVIFDALNQYNIPYRLNEEIKSI----DGHTVTFT 224
Cdd:COG1249  169 KSLVVIGGGYIGLEFA-QIFARlGSEVTLVERGDRLLPGEDPEISEALEKALEKEGIDILTGAKVTSVektgDGVTVTLE 247
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 225 SGAVE---DYDLIIAGVGVRPNSEFI--QNSGIQLDAKGYIPVNDKFETNIPNIYAVGDIVtsfyRHVDLpAHVplawgA 299
Cdd:COG1249  248 DGGGEeavEADKVLVATGRRPNTDGLglEAAGVELDERGGIKVDEYLRTSVPGIYAIGDVT----GGPQL-AHV-----A 317
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 300 HRGASIIAEQIAGHPEVTFKGYVGANIVkffdYT---LASTGISPQELK--NFDYQMVEVNL----YTHAGyypGNSKVH 370
Cdd:COG1249  318 SAEGRVAAENILGKKPRPVDYRAIPSVV----FTdpeIASVGLTEEEAReaGIDVKVGKFPFaangRALAL---GETEGF 390
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 504427289 371 LRAYFDKETRRILRAAAVGQkDVDKRIDVLTMALMHQATIDELTEFevayapPFAHP 427
Cdd:COG1249  391 VKLIADAETGRILGAHIVGP-HAGELIHEAALAMEMGLTVEDLADT------IHAHP 440
PRK06292 PRK06292
dihydrolipoamide dehydrogenase; Validated
150-427 3.44e-27

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235774 [Multi-domain]  Cd Length: 460  Bit Score: 112.96  E-value: 3.44e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 150 KTVLIVGAGYVSLEMVENMHHRGLHPTLIHRSEAVNKLMDQDMNSVIFDALNQYnIPYRLNEEIKSI-----DGHTVTFT 224
Cdd:PRK06292 170 KSLAVIGGGVIGLELGQALSRLGVKVTVFERGDRILPLEDPEVSKQAQKILSKE-FKIKLGAKVTSVeksgdEKVEELEK 248
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 225 SGAVED--YDLIIAGVGVRPNSEF--IQNSGIQLDAKGYIPVNDKFETNIPNIYAVGDIVTsfyrhvDLP-AHVplawgA 299
Cdd:PRK06292 249 GGKTETieADYVLVATGRRPNTDGlgLENTGIELDERGRPVVDEHTQTSVPGIYAAGDVNG------KPPlLHE-----A 317
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 300 HRGASIIAEQIAGHPevtfKGYVGANIVKFFDYT---LASTGISPQELK--NFDYQMVEVNlythagyYPGNSKVH---- 370
Cdd:PRK06292 318 ADEGRIAAENAAGDV----AGGVRYHPIPSVVFTdpqIASVGLTEEELKaaGIDYVVGEVP-------FEAQGRARvmgk 386
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 504427289 371 ----LRAYFDKETRRILRAAAVGqKDVDKRIDVLTMALMHQATIDELTEFevayapPFAHP 427
Cdd:PRK06292 387 ndgfVKVYADKKTGRLLGAHIIG-PDAEHLIHLLAWAMQQGLTVEDLLRM------PFYHP 440
PRK04965 PRK04965
NADH:flavorubredoxin reductase NorW;
1-278 7.34e-25

NADH:flavorubredoxin reductase NorW;


Pssm-ID: 179902 [Multi-domain]  Cd Length: 377  Bit Score: 105.38  E-value: 7.34e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289   1 MKKHIIVVGAvaGGAtsASQ----IRRLDKDSRITVYEKDSfmsfancGLPYY---LGNVIEER---DDILSTNPEKFKA 70
Cdd:PRK04965   1 MSNGIVIIGS--GFA--ARQlvknIRKQDAHIPITLITADS-------GDEYNkpdLSHVFSQGqraDDLTRQSAGEFAE 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  71 YKDIDVKVKHEVLKIDDKKQTVTVKnhftGETFedAYDALVLSPGARAsqlnFdVP------HLFTLRNMDDTDQIDTYI 144
Cdd:PRK04965  70 QFNLRLFPHTWVTDIDAEAQVVKSQ----GNQW--QYDKLVLATGASA----F-VPpipgreLMLTLNSQQEYRAAETQL 138
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 145 RQynVKTVLIVGAGYVSLEMVENMHHRGLHPTLIHRSEAV-NKLMDQDMNSVIFDALNQYNIPYRLNEEIKSI----DGH 219
Cdd:PRK04965 139 RD--AQRVLVVGGGLIGTELAMDLCRAGKAVTLVDNAASLlASLMPPEVSSRLQHRLTEMGVHLLLKSQLQGLektdSGI 216
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 504427289 220 TVTFTSGAVEDYDLIIAGVGVRPNSEFIQNSGIQLdAKGyIPVNDKFETNIPNIYAVGD 278
Cdd:PRK04965 217 RATLDSGRSIEVDAVIAAAGLRPNTALARRAGLAV-NRG-IVVDSYLQTSAPDIYALGD 273
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
81-303 2.77e-23

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 99.42  E-value: 2.77e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  81 EVLKIDDKKQTVTVKNHfTGETFEdAyDALVLSPGARASQLNFDVPHLFTLRN------MDdtdqidtyIRQYNVKTVLI 154
Cdd:COG0492   78 EVTSVDKDDGPFRVTTD-DGTEYE-A-KAVIIATGAGPRKLGLPGEEEFEGRGvsycatCD--------GFFFRGKDVVV 146
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 155 VGAGYVSLEMVENMHHRGLHPTLIHRSE---AVNKLMDQdmnsvifdALNQYNIPYRLNEEIKSIDG----HTVTFT--- 224
Cdd:COG0492  147 VGGGDSALEEALYLTKFASKVTLIHRRDelrASKILVER--------LRANPKIEVLWNTEVTEIEGdgrvEGVTLKnvk 218
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 225 SGAVEDYD---LIIAgVGVRPNSEFIQNSGIQLDAKGYIPVNDKFETNIPNIYAVGDIVTSFYRHVdlpahvplAWGAHR 301
Cdd:COG0492  219 TGEEKELEvdgVFVA-IGLKPNTELLKGLGLELDEDGYIVVDEDMETSVPGVFAAGDVRDYKYRQA--------ATAAGE 289

                 ..
gi 504427289 302 GA 303
Cdd:COG0492  290 GA 291
PRK06416 PRK06416
dihydrolipoamide dehydrogenase; Reviewed
89-389 8.99e-22

dihydrolipoamide dehydrogenase; Reviewed


Pssm-ID: 235798 [Multi-domain]  Cd Length: 462  Bit Score: 97.14  E-value: 8.99e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  89 KQTVTVKNHFTGETFEdaYDALVLSPGARAsqlnfdvphlFTLRNMD-DTDQIDTYIRQYNVKTV----LIVGAGYVSLE 163
Cdd:PRK06416 119 PNTVRVMTEDGEQTYT--AKNIILATGSRP----------RELPGIEiDGRVIWTSDEALNLDEVpkslVVIGGGYIGVE 186
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 164 MVENMHHRGLHPTLIhrsEAVNKLM---DQDMNSVIFDALNQYNIPYRLNEEIKSI----DGHTVTFTSGAVEDY---DL 233
Cdd:PRK06416 187 FASAYASLGAEVTIV---EALPRILpgeDKEISKLAERALKKRGIKIKTGAKAKKVeqtdDGVTVTLEDGGKEETleaDY 263
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 234 IIAGVGVRPNSEFI--QNSGIQLDaKGYIPVNDKFETNIPNIYAVGDIvtsfyrhvdlpahVPLAWGAHRG---ASIIAE 308
Cdd:PRK06416 264 VLVAVGRRPNTENLglEELGVKTD-RGFIEVDEQLRTNVPNIYAIGDI-------------VGGPMLAHKAsaeGIIAAE 329
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 309 QIAGHP-EVTfkgYVGANIVKFFDYTLASTGISPQELKNFDYQmVEVNLYthagYYPGNSKV--------HLRAYFDKET 379
Cdd:PRK06416 330 AIAGNPhPID---YRGIPAVTYTHPEVASVGLTEAKAKEEGFD-VKVVKF----PFAGNGKAlalgetdgFVKLIFDKKD 401
                        330
                 ....*....|
gi 504427289 380 RRILRAAAVG 389
Cdd:PRK06416 402 GEVLGAHMVG 411
nitri_red_nirB TIGR02374
nitrite reductase [NAD(P)H], large subunit; [Central intermediary metabolism, Nitrogen ...
5-338 1.54e-21

nitrite reductase [NAD(P)H], large subunit; [Central intermediary metabolism, Nitrogen metabolism]


Pssm-ID: 162827 [Multi-domain]  Cd Length: 785  Bit Score: 97.59  E-value: 1.54e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289    5 IIVVGAVAGGATSASQIRRLDKDS-RITVYEKDSFMSFANCGLPYYLGNviEERDDILSTNPEKFKAYKDIDVKVKHEVL 83
Cdd:TIGR02374   1 LVLVGNGMAGHRCIEEVLKLNRHMfEITIFGEEPHPNYNRILLSSVLQG--EADLDDITLNSKDWYEKHGITLYTGETVI 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289   84 KID-DKKQTVTVKnhftGETFedAYDALVLSPGARASQLNF---DVPHLFTLRNMDDTDQIDTYIRQYnvKTVLIVGAGY 159
Cdd:TIGR02374  79 QIDtDQKQVITDA----GRTL--SYDKLILATGSYPFILPIpgaDKKGVYVFRTIEDLDAIMAMAQRF--KKAAVIGGGL 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  160 VSLEMVENMHHRGLHPTLIHRSEAV-NKLMDQDMNSVIFDALNQYNIPYRLNEEIKSIDGHT----VTFTSGAVEDYDLI 234
Cdd:TIGR02374 151 LGLEAAVGLQNLGMDVSVIHHAPGLmAKQLDQTAGRLLQRELEQKGLTFLLEKDTVEIVGATkadrIRFKDGSSLEADLI 230
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  235 IAGVGVRPNSEFIQNSGIqlDAKGYIPVNDKFETNIPNIYAVGDIVTSFYRHVDLPAhvPLawgaHRGASIIAEQIAGHP 314
Cdd:TIGR02374 231 VMAAGIRPNDELAVSAGI--KVNRGIIVNDSMQTSDPDIYAVGECAEHNGRVYGLVA--PL----YEQAKVLADHICGVE 302
                         330       340
                  ....*....|....*....|....
gi 504427289  315 EVTFKGYVGANIVKFFDYTLASTG 338
Cdd:TIGR02374 303 CEEYEGSDLSAKLKLLGVDVWSAG 326
PRK06116 PRK06116
glutathione reductase; Validated
150-279 7.70e-21

glutathione reductase; Validated


Pssm-ID: 235701 [Multi-domain]  Cd Length: 450  Bit Score: 94.45  E-value: 7.70e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 150 KTVLIVGAGYVSLEMVENMHHRGLHPTLIHRSEAVNKLMDQDMNSVIFDALNQYNIPYRLNEEIKSI----DGH-TVTFT 224
Cdd:PRK06116 168 KRVAVVGAGYIAVEFAGVLNGLGSETHLFVRGDAPLRGFDPDIRETLVEEMEKKGIRLHTNAVPKAVeknaDGSlTLTLE 247
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 504427289 225 SGAVEDYDLIIAGVGVRPNSEFI--QNSGIQLDAKGYIPVNDKFETNIPNIYAVGDI 279
Cdd:PRK06116 248 DGETLTVDCLIWAIGREPNTDGLglENAGVKLNEKGYIIVDEYQNTNVPGIYAVGDV 304
PRK06327 PRK06327
dihydrolipoamide dehydrogenase; Validated
154-346 2.94e-19

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235779 [Multi-domain]  Cd Length: 475  Bit Score: 89.60  E-value: 2.94e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 154 IVGAGYVSLEMVENMHHRGLHPTLIHRSEAVNKLMDQDMNSVIFDALNQYNIPYRLNEEIKSI----DGHTVTFTSGA-- 227
Cdd:PRK06327 188 VIGAGVIGLELGSVWRRLGAEVTILEALPAFLAAADEQVAKEAAKAFTKQGLDIHLGVKIGEIktggKGVSVAYTDADge 267
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 228 --VEDYDLIIAGVGVRPNSEFI--QNSGIQLDAKGYIPVNDKFETNIPNIYAVGDIVTSFyrhvdLPAHVplawGAHRGA 303
Cdd:PRK06327 268 aqTLEVDKLIVSIGRVPNTDGLglEAVGLKLDERGFIPVDDHCRTNVPNVYAIGDVVRGP-----MLAHK----AEEEGV 338
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 504427289 304 sIIAEQIAGHpevtfKGYVGANIVKFFDYT---LASTGISPQELKN 346
Cdd:PRK06327 339 -AVAERIAGQ-----KGHIDYNTIPWVIYTspeIAWVGKTEQQLKA 378
PRK06370 PRK06370
FAD-containing oxidoreductase;
153-427 3.83e-19

FAD-containing oxidoreductase;


Pssm-ID: 235787 [Multi-domain]  Cd Length: 463  Bit Score: 89.49  E-value: 3.83e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 153 LIVGAGYVSLEMVEnMHHR-GLHPTLIHRSEAVNKLMDQDMNSVIFDALNQYNIPYRLNEEIKSI----DGHTVTFTSGA 227
Cdd:PRK06370 175 VIIGGGYIGLEFAQ-MFRRfGSEVTVIERGPRLLPREDEDVAAAVREILEREGIDVRLNAECIRVerdgDGIAVGLDCNG 253
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 228 VEDY---DLIIAGVGVRPNSEFI--QNSGIQLDAKGYIPVNDKFETNIPNIYAVGDIVTSF-YRHVdlpahvplawgAHR 301
Cdd:PRK06370 254 GAPEitgSHILVAVGRVPNTDDLglEAAGVETDARGYIKVDDQLRTTNPGIYAAGDCNGRGaFTHT-----------AYN 322
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 302 GASIIAEQIAGHPEVTfkgyVGANIVKFFDYT---LASTGISPQELKN-------FDYQMVEVNLYTHAGYYPGNSKVHL 371
Cdd:PRK06370 323 DARIVAANLLDGGRRK----VSDRIVPYATYTdppLARVGMTEAEARKsgrrvlvGTRPMTRVGRAVEKGETQGFMKVVV 398
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 504427289 372 rayfDKETRRILRAAAVGqKDVDKRIDVLTMALMHQATIDELTEfevayaPPFAHP 427
Cdd:PRK06370 399 ----DADTDRILGATILG-VHGDEMIHEILDAMYAGAPYTTLSR------AIHIHP 443
PRK09754 PRK09754
phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
3-314 5.37e-17

phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional


Pssm-ID: 170080 [Multi-domain]  Cd Length: 396  Bit Score: 82.28  E-value: 5.37e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289   3 KHIIVVGAVAGGATSASQIRRLDKDSRITVYEKDSFMSFANCGLPY-YLgnvIEERDDILSTNPEKFKAYKDIDVKVKHE 81
Cdd:PRK09754   4 KTIIIVGGGQAAAMAAASLRQQGFTGELHLFSDERHLPYERPPLSKsML---LEDSPQLQQVLPANWWQENNVHLHSGVT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  82 VLKIDDKKQTVTVKNhftGETFEdaYDALVLSPGARASQLnfdvPHL-------FTLRNMDDTDQIDTYIRQYnvKTVLI 154
Cdd:PRK09754  81 IKTLGRDTRELVLTN---GESWH--WDQLFIATGAAARPL----PLLdalgercFTLRHAGDAARLREVLQPE--RSVVI 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 155 VGAGYVSLEMVENMHHRGLHPTLIhrsEAVNKLMDQDMNSVIFDAL----NQYNIPYRLNEEIKSI-DGHTV--TFTSGA 227
Cdd:PRK09754 150 VGAGTIGLELAASATQRRCKVTVI---ELAATVMGRNAPPPVQRYLlqrhQQAGVRILLNNAIEHVvDGEKVelTLQSGE 226
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 228 VEDYDLIIAGVGVRPNSEFIQNSGiqLDAKGYIPVNDKFETNIPNIYAVGDIVTSFYRHVDLpaHVPLAW-GAHRGASII 306
Cdd:PRK09754 227 TLQADVVIYGIGISANDQLAREAN--LDTANGIVIDEACRTCDPAIFAGGDVAITRLDNGAL--HRCESWeNANNQAQIA 302

                 ....*...
gi 504427289 307 AEQIAGHP 314
Cdd:PRK09754 303 AAAMLGLP 310
trypano_reduc TIGR01423
trypanothione-disulfide reductase; Trypanothione, a glutathione-modified derivative of ...
150-279 4.52e-15

trypanothione-disulfide reductase; Trypanothione, a glutathione-modified derivative of spermidine, is (in its reduced form) an important antioxidant found in trypanosomatids (Crithidia, Leishmania, Trypanosoma). This model describes trypanothione reductase, a possible antitrypanosomal drug target closely related to some forms of glutathione reductase.


Pssm-ID: 200098 [Multi-domain]  Cd Length: 486  Bit Score: 76.94  E-value: 4.52e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  150 KTVLIVGAGYVSLEM--VENMHH-RGLHPTLIHRSEAVNKLMDQDMNSVIFDALNQYNIPYRLNEEIKSIDGHT-----V 221
Cdd:TIGR01423 188 RRVLTVGGGFISVEFagIFNAYKpRGGKVTLCYRNNMILRGFDSTLRKELTKQLRANGINIMTNENPAKVTLNAdgskhV 267
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  222 TFTSGAVEDYDLIIAGVGVRPNSEFIQ--NSGIQLDAKGYIPVNDKFETNIPNIYAVGDI 279
Cdd:TIGR01423 268 TFESGKTLDVDVVMMAIGRVPRTQTLQldKVGVELTKKGAIQVDEFSRTNVPNIYAIGDV 327
Pyr_redox pfam00070
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
152-226 4.56e-14

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 425450 [Multi-domain]  Cd Length: 80  Bit Score: 67.23  E-value: 4.56e-14
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 504427289  152 VLIVGAGYVSLEMVENMHHRGLHPTLIHRSEAVNKLMDQDMNSVIFDALNQYNIPYRLNEEIKSIDGH----TVTFTSG 226
Cdd:pfam00070   2 VVVVGGGYIGLELAGALARLGSKVTVVERRDRLLPGFDPEIAKILQEKLEKNGIEFLLNTTVEAIEGNgdgvVVVLTDG 80
PRK05249 PRK05249
Si-specific NAD(P)(+) transhydrogenase;
81-280 1.01e-13

Si-specific NAD(P)(+) transhydrogenase;


Pssm-ID: 235373 [Multi-domain]  Cd Length: 461  Bit Score: 72.88  E-value: 1.01e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  81 EVLKIDDKKQTVTVKNhftgetfedaydaLVLSPG---ARASQLNFDVPHLFtlrnmdDTDQIDTYirQYNVKTVLIVGA 157
Cdd:PRK05249 125 EVECPDGEVETLTADK-------------IVIATGsrpYRPPDVDFDHPRIY------DSDSILSL--DHLPRSLIIYGA 183
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 158 GYVSLE---MVENMhhrGLHPTLIHRSEAVNKLMDQDMNSVIFDALNQYNIPYRLNEEIKSIDGH----TVTFTSGAVED 230
Cdd:PRK05249 184 GVIGCEyasIFAAL---GVKVTLINTRDRLLSFLDDEISDALSYHLRDSGVTIRHNEEVEKVEGGddgvIVHLKSGKKIK 260
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 504427289 231 YDLIIAGVGVRPNSEF--IQNSGIQLDAKGYIPVNDKFETNIPNIYAVGDIV 280
Cdd:PRK05249 261 ADCLLYANGRTGNTDGlnLENAGLEADSRGQLKVNENYQTAVPHIYAVGDVI 312
TGR TIGR01438
thioredoxin and glutathione reductase selenoprotein; This homodimeric, FAD-containing member ...
150-301 2.78e-12

thioredoxin and glutathione reductase selenoprotein; This homodimeric, FAD-containing member of the pyridine nucleotide disulfide oxidoreductase family contains a C-terminal motif Cys-SeCys-Gly, where SeCys is selenocysteine encoded by TGA (in some sequence reports interpreted as a stop codon). In some members of this subfamily, Cys-SeCys-Gly is replaced by Cys-Cys-Gly. The reach of the selenium atom at the C-term arm of the protein is proposed to allow broad substrate specificity.


Pssm-ID: 273624 [Multi-domain]  Cd Length: 484  Bit Score: 68.34  E-value: 2.78e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  150 KTvLIVGAGYVSLEMVENMHHRGLHPTLIHRSeAVNKLMDQDMNSVIFDALNQYNIPYR---LNEEIKSIDGHT-VTFT- 224
Cdd:TIGR01438 182 KT-LVVGASYVALECAGFLAGIGLDVTVMVRS-ILLRGFDQDCANKVGEHMEEHGVKFKrqfVPIKVEQIEAKVlVEFTd 259
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  225 --SGAVEDYDLIIAGVGVRPNSEFI--QNSGIQLDAK-GYIPVNDKFETNIPNIYAVGDIVTsfyrhvDLPAHVPLAWGA 299
Cdd:TIGR01438 260 stNGIEEEYDTVLLAIGRDACTRKLnlENVGVKINKKtGKIPADEEEQTNVPYIYAVGDILE------DKPELTPVAIQA 333

                  ..
gi 504427289  300 HR 301
Cdd:TIGR01438 334 GR 335
PTZ00058 PTZ00058
glutathione reductase; Provisional
141-280 7.82e-11

glutathione reductase; Provisional


Pssm-ID: 185420 [Multi-domain]  Cd Length: 561  Bit Score: 63.87  E-value: 7.82e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 141 DTYIRQYNVKTVLIVGAGYVSLEMVENMHHRGLHPTLIHRSEAVNKLMDQDMNSVIFDALNQYNI-------PYRLnEEI 213
Cdd:PTZ00058 229 DDFFKIKEAKRIGIAGSGYIAVELINVVNRLGAESYIFARGNRLLRKFDETIINELENDMKKNNIniithanVEEI-EKV 307
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 504427289 214 KSIDGHTVTFTSGAVEDYDLIIAGVGVRPNSEFIQNSGIQ-LDAKGYIPVNDKFETNIPNIYAVGDIV 280
Cdd:PTZ00058 308 KEKNLTIYLSDGRKYEHFDYVIYCVGRSPNTEDLNLKALNiKTPKGYIKVDDNQRTSVKHIYAVGDCC 375
PRK07846 PRK07846
mycothione reductase; Reviewed
152-287 3.49e-10

mycothione reductase; Reviewed


Pssm-ID: 181142 [Multi-domain]  Cd Length: 451  Bit Score: 61.51  E-value: 3.49e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 152 VLIVGAGYVSLEMVENMHHRGLHPTLIHRSEAVNKLMDQDMNSVIFD-ALNQYNIpyRLNEEIKSI----DGHTVTFTSG 226
Cdd:PRK07846 169 LVIVGGGFIAAEFAHVFSALGVRVTVVNRSGRLLRHLDDDISERFTElASKRWDV--RLGRNVVGVsqdgSGVTLRLDDG 246
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 504427289 227 AVEDYDLIIAGVGVRPNSEFI--QNSGIQLDAKGYIPVnDKFE-TNIPNIYAVGDiVTSFY--RHV 287
Cdd:PRK07846 247 STVEADVLLVATGRVPNGDLLdaAAAGVDVDEDGRVVV-DEYQrTSAEGVFALGD-VSSPYqlKHV 310
PLN02507 PLN02507
glutathione reductase
150-279 4.77e-10

glutathione reductase


Pssm-ID: 215281 [Multi-domain]  Cd Length: 499  Bit Score: 61.37  E-value: 4.77e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 150 KTVLIVGAGYVSLEMVENMHHRGLHPTLIHRSEAVNKLMDQDMNSVIFDALNQYNIPYR----LNEEIKSIDGHTVTFTS 225
Cdd:PLN02507 204 KRAVVLGGGYIAVEFASIWRGMGATVDLFFRKELPLRGFDDEMRAVVARNLEGRGINLHprtnLTQLTKTEGGIKVITDH 283
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 504427289 226 GAVEDYDLIIAGVGVRPNSEFI--QNSGIQLDAKGYIPVNDKFETNIPNIYAVGDI 279
Cdd:PLN02507 284 GEEFVADVVLFATGRAPNTKRLnlEAVGVELDKAGAVKVDEYSRTNIPSIWAIGDV 339
PRK07251 PRK07251
FAD-containing oxidoreductase;
1-407 4.87e-10

FAD-containing oxidoreductase;


Pssm-ID: 180907 [Multi-domain]  Cd Length: 438  Bit Score: 61.30  E-value: 4.87e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289   1 MKKH-IIVVGAVAGGATSASQIRRLDKdsRITVYEKDSFMSFANC-----------------GLPYylGNVIEERDDILS 62
Cdd:PRK07251   1 MLTYdLIVIGFGKAGKTLAAKLASAGK--KVALVEESKAMYGGTCinigciptktllvaaekNLSF--EQVMATKNTVTS 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  63 T-NPEKFKAYKDIDVK--------VKHEVLKI---DDKKQtvtvknhFTGETfedaydaLVLSPGARASQLNfdVPHLFT 130
Cdd:PRK07251  77 RlRGKNYAMLAGSGVDlydaeahfVSNKVIEVqagDEKIE-------LTAET-------IVINTGAVSNVLP--IPGLAD 140
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 131 LRNMDDTDQIDTYIRQynVKTVLIVGAGYVSLEMVENMHHRGLHPTLIHRSEAVNKLMDQDMNSVIFDALNQYNIPYRLN 210
Cdd:PRK07251 141 SKHVYDSTGIQSLETL--PERLGIIGGGNIGLEFAGLYNKLGSKVTVLDAASTILPREEPSVAALAKQYMEEDGITFLLN 218
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 211 ---EEIKSIDGHTVTFTSGAVEDYDLIIAGVGVRPNSEFIQ--NSGIQLDAKGYIPVNDKFETNIPNIYAVGDIVTSfyr 285
Cdd:PRK07251 219 ahtTEVKNDGDQVLVVTEDETYRFDALLYATGRKPNTEPLGleNTDIELTERGAIKVDDYCQTSVPGVFAVGDVNGG--- 295
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 286 hvdlPAHVPLAWGAHRgasIIAEQIAGHPEVTFKGYVGANIVKFFDYTLASTGISPQELKNFDYQmVEVNLYTHAGYYPG 365
Cdd:PRK07251 296 ----PQFTYISLDDFR---IVFGYLTGDGSYTLEDRGNVPTTMFITPPLSQVGLTEKEAKEAGLP-YAVKELLVAAMPRA 367
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*.
gi 504427289 366 NSKVHLRAYF----DKETRRILRAAAVGQkDVDKRIDVLTMALMHQ 407
Cdd:PRK07251 368 HVNNDLRGAFkvvvNTETKEILGATLFGE-GSQEIINLITMAMDNK 412
PTZ00052 PTZ00052
thioredoxin reductase; Provisional
150-362 1.15e-08

thioredoxin reductase; Provisional


Pssm-ID: 185416 [Multi-domain]  Cd Length: 499  Bit Score: 57.14  E-value: 1.15e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 150 KTvLIVGAGYVSLEMVENMHHRGLHPTLIHRSeAVNKLMDQDMNSVIFDALNQYNIPY----------RLNEEIKsidgh 219
Cdd:PTZ00052 184 KT-LIVGASYIGLETAGFLNELGFDVTVAVRS-IPLRGFDRQCSEKVVEYMKEQGTLFlegvvpinieKMDDKIK----- 256
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 220 tVTFTSGAVEDYDLIIAGVGVRPNSEFI--QNSGIQLDAKGYIPVNDKfETNIPNIYAVGDIVtsfyrhVDLPAHVPLAW 297
Cdd:PTZ00052 257 -VLFSDGTTELFDTVLYATGRKPDIKGLnlNAIGVHVNKSNKIIAPND-CTNIPNIFAVGDVV------EGRPELTPVAI 328
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 504427289 298 GAhrgASIIAEQIAGHPEvtfkgyvganivKFFDYTLASTGIspqelknfdYQMVEvnlYTHAGY 362
Cdd:PTZ00052 329 KA---GILLARRLFKQSN------------EFIDYTFIPTTI---------FTPIE---YGACGY 366
PRK12778 PRK12778
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ...
216-310 2.15e-08

bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;


Pssm-ID: 237200 [Multi-domain]  Cd Length: 752  Bit Score: 56.29  E-value: 2.15e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 216 IDGHTVTFtsgaveDYDLIIAGVGVRPNSeFIQNS--GIQLDAKGYIPVNDKFETNIPNIYAVGDIVTSfyrhvdlPAHV 293
Cdd:PRK12778 666 IPGSTFTV------DVDLVIVSVGVSPNP-LVPSSipGLELNRKGTIVVDEEMQSSIPGIYAGGDIVRG-------GATV 731
                         90
                 ....*....|....*...
gi 504427289 294 PLAWGA-HRGASIIAEQI 310
Cdd:PRK12778 732 ILAMGDgKRAAAAIDEYL 749
Pyr_redox_dim pfam02852
Pyridine nucleotide-disulphide oxidoreductase, dimerization domain; This family includes both ...
327-425 4.06e-08

Pyridine nucleotide-disulphide oxidoreductase, dimerization domain; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases.


Pssm-ID: 427019 [Multi-domain]  Cd Length: 109  Bit Score: 51.02  E-value: 4.06e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  327 VKFFDYTLASTGISPQELKNFDYQMVEVNLY----THAGYYPGNsKVHLRAYFDKETRRILRAAAVGqKDVDKRIDVLTM 402
Cdd:pfam02852   4 VVFTDPEIASVGLTEEEAKEKGGEVKVGKFPfaanGRALAYGDT-DGFVKLVADRETGKILGAHIVG-PNAGELIQEAAL 81
                          90       100
                  ....*....|....*....|...
gi 504427289  403 ALMHQATIDELTEfEVAYAPPFA 425
Cdd:pfam02852  82 AIKMGATVEDLAN-TIHIHPTLS 103
Pyr_redox_3 pfam13738
Pyridine nucleotide-disulphide oxidoreductase;
70-277 5.40e-08

Pyridine nucleotide-disulphide oxidoreductase;


Pssm-ID: 404603 [Multi-domain]  Cd Length: 296  Bit Score: 54.15  E-value: 5.40e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289   70 AYKDIDVKVKHEVLKIddKKQtvtvKNHFTGETFEDAYDA--LVLSPGarasqlNFDVPHLftlrnMDDTDQIDTY---- 143
Cdd:pfam13738  86 DHFELPINLFEEVTSV--KKE----DDGFVVTTSKGTYQAryVIIATG------EFDFPNK-----LGVPELPKHYsyvk 148
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  144 -IRQYNVKTVLIVGaGYVS-----LEMVEnmhhRGLHPTLIHRSEAVNKLMDQDMNSV-------IFDALNQYNIPYRLN 210
Cdd:pfam13738 149 dFHPYAGQKVVVIG-GYNSavdaaLELVR----KGARVTVLYRGSEWEDRDSDPSYSLspdtlnrLEELVKNGKIKAHFN 223
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 504427289  211 EEIKSID----GHTVTFTSG-AVEDYDLIIAGVGVRPNSEFIQNSGIQLDAKGYIPVNDK-FETNIPNIYAVG 277
Cdd:pfam13738 224 AEVKEITevdvSYKVHTEDGrKVTSNDDPILATGYHPDLSFLKKGLFELDEDGRPVLTEEtESTNVPGLFLAG 296
PTZ00318 PTZ00318
NADH dehydrogenase-like protein; Provisional
53-312 5.94e-08

NADH dehydrogenase-like protein; Provisional


Pssm-ID: 185553 [Multi-domain]  Cd Length: 424  Bit Score: 54.77  E-value: 5.94e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  53 VIEERDDILSTNPEKF---KAYkDIDVKVKHEVLKIDDKKQTVTVKnhftgeTFEDAYDALVLSPGARASqlNFDVP--- 126
Cdd:PTZ00318  64 ICEPVRPALAKLPNRYlraVVY-DVDFEEKRVKCGVVSKSNNANVN------TFSVPYDKLVVAHGARPN--TFNIPgve 134
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 127 -HLFTLRNMDDTDQIDTYIRQ---------------YNVKTVLIVGAGYVSLEMVENMHH------RGLHP--------T 176
Cdd:PTZ00318 135 eRAFFLKEVNHARGIRKRIVQcieraslpttsveerKRLLHFVVVGGGPTGVEFAAELADffrddvRNLNPelveeckvT 214
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 177 LIHRSEAVNKLMDQDMNSVIFDALNQYNIPYRLNEEIKSIDGHTVTFTSGAVEDYDLIIAGVGVRPNSeFIQNSGIQLDA 256
Cdd:PTZ00318 215 VLEAGSEVLGSFDQALRKYGQRRLRRLGVDIRTKTAVKEVLDKEVVLKDGEVIPTGLVVWSTGVGPGP-LTKQLKVDKTS 293
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 504427289 257 KGYIPVNDKFET-NIPNIYAVGDIVTSfyRHVDLPahvPLAWGAHRGASIIAEQIAG 312
Cdd:PTZ00318 294 RGRISVDDHLRVkPIPNVFALGDCAAN--EERPLP---TLAQVASQQGVYLAKEFNN 345
PLN02546 PLN02546
glutathione reductase
150-279 1.59e-07

glutathione reductase


Pssm-ID: 215301 [Multi-domain]  Cd Length: 558  Bit Score: 53.34  E-value: 1.59e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 150 KTVLIVGAGYVSLEMVENMHhrGLHpTLIH---RSEAVNKLMDQDMNSVIFDALNQYNIPYRLNEE----IKSIDGHTVT 222
Cdd:PLN02546 253 EKIAIVGGGYIALEFAGIFN--GLK-SDVHvfiRQKKVLRGFDEEVRDFVAEQMSLRGIEFHTEESpqaiIKSADGSLSL 329
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 223 FTS-GAVEDYDLIIAGVGVRPNSEFI--QNSGIQLDAKGYIPVNDKFETNIPNIYAVGDI 279
Cdd:PLN02546 330 KTNkGTVEGFSHVMFATGRKPNTKNLglEEVGVKMDKNGAIEVDEYSRTSVPSIWAVGDV 389
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
232-281 4.88e-07

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 51.67  E-value: 4.88e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 504427289 232 DLIIAGVGVRPNSEFIQNS-GIQLDAKGYIPVNDK-FETNIPNIYAVGDIVT 281
Cdd:COG0493  361 DLVILAIGQTPDPSGLEEElGLELDKRGTIVVDEEtYQTSLPGVFAGGDAVR 412
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
232-281 3.60e-06

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 49.02  E-value: 3.60e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 504427289 232 DLIIAGVGVRPNSEFIQNS-GIQLDAKGYIPVNDK-FETNIPNIYAVGDIVT 281
Cdd:PRK11749 377 DLVIKAIGQTPNPLILSTTpGLELNRWGTIIADDEtGRTSLPGVFAGGDIVT 428
PRK10262 PRK10262
thioredoxin reductase; Provisional
79-286 1.07e-05

thioredoxin reductase; Provisional


Pssm-ID: 182343 [Multi-domain]  Cd Length: 321  Bit Score: 47.36  E-value: 1.07e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  79 KHEVLKIDDKKQTVTVKNH---FTGETFEDAYDALVLSPGARASQLNFDVPHLFTLRNMDDTDQIDTYIrqYNVKTVLIV 155
Cdd:PRK10262  75 KFETEIIFDHINKVDLQNRpfrLTGDSGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFF--YRNQKVAVI 152
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 156 GAGYVSLEMVENMHHRGLHPTLIHRSEAVNKlmDQDMNSVIFDALNQYNIPYRLNEEIKSIDGHTVTFTSGAVEDYD--- 232
Cdd:PRK10262 153 GGGNTAVEEALYLSNIASEVHLIHRRDGFRA--EKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQnsd 230
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 504427289 233 ----LIIAG----VGVRPNSEFIQNSgIQLDaKGYIPVN-----DKFETNIPNIYAVGDIVTSFYRH 286
Cdd:PRK10262 231 niesLDVAGlfvaIGHSPNTAIFEGQ-LELE-NGYIKVQsgihgNATQTSIPGVFAAGDVMDHIYRQ 295
PRK08010 PRK08010
pyridine nucleotide-disulfide oxidoreductase; Provisional
154-279 1.75e-05

pyridine nucleotide-disulfide oxidoreductase; Provisional


Pssm-ID: 181196 [Multi-domain]  Cd Length: 441  Bit Score: 46.93  E-value: 1.75e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 154 IVGAGYVSLEMVENMHHRGLHPTLIHRSEAVNKLMDQDMNSVIFDALNQYNIPYRLN---EEIKSIDGHTVTFTSGAVED 230
Cdd:PRK08010 163 ILGGGYIGVEFASMFANFGSKVTILEAASLFLPREDRDIADNIATILRDQGVDIILNahvERISHHENQVQVHSEHAQLA 242
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 504427289 231 YDLIIAGVGVRPNSEFI--QNSGIQLDAKGYIPVNDKFETNIPNIYAVGDI 279
Cdd:PRK08010 243 VDALLIASGRQPATASLhpENAGIAVNERGAIVVDKYLHTTADNIWAMGDV 293
PRK14989 PRK14989
nitrite reductase subunit NirD; Provisional
61-278 5.62e-05

nitrite reductase subunit NirD; Provisional


Pssm-ID: 184951 [Multi-domain]  Cd Length: 847  Bit Score: 45.49  E-value: 5.62e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289  61 LSTNPEKFKAYKDIDVKVKHEVLKIDDKKQTVTVKnhfTGETFEdaYDALVLSPGA-------RASqlnfDVPHLFTLRN 133
Cdd:PRK14989  61 LSLVREGFYEKHGIKVLVGERAITINRQEKVIHSS---AGRTVF--YDKLIMATGSypwippiKGS----ETQDCFVYRT 131
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 134 MDDTDQIDTYIRQynVKTVLIVGAGYVSLEMVENMHHRGLHptlIHRSEAVNKLMDQDMNSVIFDALNQ----YNIPYRL 209
Cdd:PRK14989 132 IEDLNAIEACARR--SKRGAVVGGGLLGLEAAGALKNLGVE---THVIEFAPMLMAEQLDQMGGEQLRRkiesMGVRVHT 206
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 504427289 210 NEEIKSI------DGHTVTFTSGAVEDYDLIIAGVGVRPNSEFIQNSGIQLDAKGYIPVNDKFETNIPNIYAVGD 278
Cdd:PRK14989 207 SKNTLEIvqegveARKTMRFADGSELEVDFIVFSTGIRPQDKLATQCGLAVAPRGGIVINDSCQTSDPDIYAIGE 281
PRK15317 PRK15317
alkyl hydroperoxide reductase subunit F; Provisional
224-284 2.47e-04

alkyl hydroperoxide reductase subunit F; Provisional


Pssm-ID: 237942 [Multi-domain]  Cd Length: 517  Bit Score: 43.22  E-value: 2.47e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 504427289 224 TSGAVEDYDLiiAGV----GVRPNSEFIQNSgIQLDAKGYIPVNDKFETNIPNIYAVGDIVTSFY 284
Cdd:PRK15317 429 TTGEEHHLEL--EGVfvqiGLVPNTEWLKGT-VELNRRGEIIVDARGATSVPGVFAAGDCTTVPY 490
PRK07845 PRK07845
flavoprotein disulfide reductase; Reviewed
217-278 2.88e-04

flavoprotein disulfide reductase; Reviewed


Pssm-ID: 236112 [Multi-domain]  Cd Length: 466  Bit Score: 42.92  E-value: 2.88e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 504427289 217 DGHTVTFTSG-AVEDYDLIIAgVGVRPNSEFI--QNSGIQLDAKGYIPVNDKFETNIPNIYAVGD 278
Cdd:PRK07845 249 DGVVVTLTDGrTVEGSHALMA-VGSVPNTAGLglEEAGVELTPSGHITVDRVSRTSVPGIYAAGD 312
PRK12831 PRK12831
putative oxidoreductase; Provisional
230-303 4.47e-04

putative oxidoreductase; Provisional


Pssm-ID: 183780 [Multi-domain]  Cd Length: 464  Bit Score: 42.31  E-value: 4.47e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 504427289 230 DYDLIIAGVGVRPNSEFIQNS-GIQLDAKGYIPVN-DKFETNIPNIYAVGDIVTSfyrhvdlPAHVPLAWGAHRGA 303
Cdd:PRK12831 384 EVDTVIMSLGTSPNPLISSTTkGLKINKRGCIVADeETGLTSKEGVFAGGDAVTG-------AATVILAMGAGKKA 452
PRK13748 PRK13748
putative mercuric reductase; Provisional
233-278 7.57e-04

putative mercuric reductase; Provisional


Pssm-ID: 184298 [Multi-domain]  Cd Length: 561  Bit Score: 41.68  E-value: 7.57e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 504427289 233 LIIAgVGVRPN--SEFIQNSGIQLDAKGYIPVNDKFETNIPNIYAVGD 278
Cdd:PRK13748 357 LLVA-TGRAPNtrSLALDAAGVTVNAQGAIVIDQGMRTSVPHIYAAGD 403
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
196-311 9.86e-04

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 41.39  E-value: 9.86e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504427289 196 IFDALNQYNIPyRLNEEIKSIDGHTVTFTSGAVEDYDLIIAGVGVRPNSEFIQNSGIqLDAKGYipvnDKFET------- 268
Cdd:COG2072  274 YYEALRRGNVE-LVTGGIERITEDGVVFADGTEHEVDVIVWATGFRADLPWLAPLDV-RGRDGR----SGPRAylgvvvp 347
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 504427289 269 NIPNIYAVGdivtsFYRhvdLPAHVPLAWGAHRGASIIAEQIA 311
Cdd:COG2072  348 GFPNLFFLG-----PNS---PSGHSSLTLGAERQARYIARLIA 382
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
191-236 8.80e-03

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 38.00  E-value: 8.80e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 504427289 191 DMNSVIFDALNQYNIPYRLNEEIKSI----DGHTVTFTSGAVEDYDLIIA 236
Cdd:COG0654  105 DLERALLEAARALGVELRFGTEVTGLeqdaDGVTVTLADGRTLRADLVVG 154
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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