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Conserved domains on  [gi|504435365|ref|WP_014622467|]
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TNT domain-containing protein [Streptococcus equi]

Protein Classification

TNT domain-containing protein( domain architecture ID 10623868)

tuberculosis necrotizing toxin (TNT) domain-containing protein similar to the C-terminal domain of Mycobacterium tuberculosis (Mtb) protein CpnT that is secreted by Mtb to kill human macrophages by hydrolyzing NAD

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
TNT pfam14021
Tuberculosis necrotizing toxin; This is the C-terminal domain secreted by Mycobacterium ...
17-137 2.94e-15

Tuberculosis necrotizing toxin; This is the C-terminal domain secreted by Mycobacterium tuberculosis (Mtb). It induces necrosis of infected cells to evade immune responses. Mtb utilizes the protein CpnT to kill human macrophages by secreting its C-terminal domain (CTD), named tuberculosis necrotizing toxin (TNT) that induces necrosis. It acts as a NAD+ glycohydrolase which hydrolyzes the essential cellular coenzyme NAD+ in the cytosol of infected macrophages resulting in necrotic cell death. CpnT transports its toxic CTD from the cell surface of M. tuberculosis by proteolytic cleavage, where the toxin is cleaved to induce host cell death. Structural analysis determined that the TNT core contains only six beta-strands as opposed to seven found in all known NAD+-utilizing toxins, and is significantly smaller, with only two short alpha-helices and two 3/10 helices. Furthermore, the putative NAD+ binding pocket identified Q822, Y765 and R757 as residues possibly involved in NAD+-binding and hydrolysis based on similar positions of catalytic amino acids of ADP-ribosylating toxins. While glutamine 822 residue was detected to be highly conserved among TNT homologs.


:

Pssm-ID: 433650  Cd Length: 84  Bit Score: 66.01  E-value: 2.94e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504435365   17 AGQIIDRYGSSSGRFTSPIENgvtlPFNKRGLPYPEGYQNYHQYRILKDISVEnvkegfsklsitdkqllmadmeefrfs 96
Cdd:pfam14021   1 PGTLLDRFGSEYGRFLAPAGT----PYEQRSLPPSNLNRNYHVYRVLKPLPVL--------------------------- 49
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 504435365   97 fddlanpqKGQIAKVFGQ-GGGTQIKMI-TSISWFEKLGLLRE 137
Cdd:pfam14021  50 --------AGPIAPWFGQpGGGVQYVLPrPSVADLLADGYLEE 84
 
Name Accession Description Interval E-value
TNT pfam14021
Tuberculosis necrotizing toxin; This is the C-terminal domain secreted by Mycobacterium ...
17-137 2.94e-15

Tuberculosis necrotizing toxin; This is the C-terminal domain secreted by Mycobacterium tuberculosis (Mtb). It induces necrosis of infected cells to evade immune responses. Mtb utilizes the protein CpnT to kill human macrophages by secreting its C-terminal domain (CTD), named tuberculosis necrotizing toxin (TNT) that induces necrosis. It acts as a NAD+ glycohydrolase which hydrolyzes the essential cellular coenzyme NAD+ in the cytosol of infected macrophages resulting in necrotic cell death. CpnT transports its toxic CTD from the cell surface of M. tuberculosis by proteolytic cleavage, where the toxin is cleaved to induce host cell death. Structural analysis determined that the TNT core contains only six beta-strands as opposed to seven found in all known NAD+-utilizing toxins, and is significantly smaller, with only two short alpha-helices and two 3/10 helices. Furthermore, the putative NAD+ binding pocket identified Q822, Y765 and R757 as residues possibly involved in NAD+-binding and hydrolysis based on similar positions of catalytic amino acids of ADP-ribosylating toxins. While glutamine 822 residue was detected to be highly conserved among TNT homologs.


Pssm-ID: 433650  Cd Length: 84  Bit Score: 66.01  E-value: 2.94e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504435365   17 AGQIIDRYGSSSGRFTSPIENgvtlPFNKRGLPYPEGYQNYHQYRILKDISVEnvkegfsklsitdkqllmadmeefrfs 96
Cdd:pfam14021   1 PGTLLDRFGSEYGRFLAPAGT----PYEQRSLPPSNLNRNYHVYRVLKPLPVL--------------------------- 49
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 504435365   97 fddlanpqKGQIAKVFGQ-GGGTQIKMI-TSISWFEKLGLLRE 137
Cdd:pfam14021  50 --------AGPIAPWFGQpGGGVQYVLPrPSVADLLADGYLEE 84
 
Name Accession Description Interval E-value
TNT pfam14021
Tuberculosis necrotizing toxin; This is the C-terminal domain secreted by Mycobacterium ...
17-137 2.94e-15

Tuberculosis necrotizing toxin; This is the C-terminal domain secreted by Mycobacterium tuberculosis (Mtb). It induces necrosis of infected cells to evade immune responses. Mtb utilizes the protein CpnT to kill human macrophages by secreting its C-terminal domain (CTD), named tuberculosis necrotizing toxin (TNT) that induces necrosis. It acts as a NAD+ glycohydrolase which hydrolyzes the essential cellular coenzyme NAD+ in the cytosol of infected macrophages resulting in necrotic cell death. CpnT transports its toxic CTD from the cell surface of M. tuberculosis by proteolytic cleavage, where the toxin is cleaved to induce host cell death. Structural analysis determined that the TNT core contains only six beta-strands as opposed to seven found in all known NAD+-utilizing toxins, and is significantly smaller, with only two short alpha-helices and two 3/10 helices. Furthermore, the putative NAD+ binding pocket identified Q822, Y765 and R757 as residues possibly involved in NAD+-binding and hydrolysis based on similar positions of catalytic amino acids of ADP-ribosylating toxins. While glutamine 822 residue was detected to be highly conserved among TNT homologs.


Pssm-ID: 433650  Cd Length: 84  Bit Score: 66.01  E-value: 2.94e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504435365   17 AGQIIDRYGSSSGRFTSPIENgvtlPFNKRGLPYPEGYQNYHQYRILKDISVEnvkegfsklsitdkqllmadmeefrfs 96
Cdd:pfam14021   1 PGTLLDRFGSEYGRFLAPAGT----PYEQRSLPPSNLNRNYHVYRVLKPLPVL--------------------------- 49
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 504435365   97 fddlanpqKGQIAKVFGQ-GGGTQIKMI-TSISWFEKLGLLRE 137
Cdd:pfam14021  50 --------AGPIAPWFGQpGGGVQYVLPrPSVADLLADGYLEE 84
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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