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Conserved domains on  [gi|504695698|ref|WP_014882800|]
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MULTISPECIES: YlaC family protein [Enterobacter]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
YlaC super family cl11369
Inner membrane protein YlaC; Members of this family include proteins annotated as inner ...
1-153 1.14e-70

Inner membrane protein YlaC; Members of this family include proteins annotated as inner membrane protein YlaC in E. coli and Salmonella. The function of this family is unknown.


The actual alignment was detected with superfamily member pfam10777:

Pssm-ID: 431490  Cd Length: 154  Bit Score: 209.50  E-value: 1.14e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695698    1 MTEIQRLLTATIDDLNLREKRDNRPRFSISFIRKHPGLFVAMYAAWLATLIVMLKSETL-VDSVWLLVVLFVVFNAFFFF 79
Cdd:pfam10777   1 MDEIKRLLTEDIERINRQEKRDGKPRFSSSFIRNHPYLCLAMLVSYLAVLVLMYYSPYFgLGSLIGFTVLFIVMSAVLLF 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 504695698   80 DVNPRYRYEDIDVLDFRVCYNGEWYNTRFVPAELIESIMHSPAVETVQKEKLQKMVSTKGQLSFYDVFTLSRPA 153
Cdd:pfam10777  81 DIKPVYRFEDIGVLDLRVCYNGEWFNSRHVSPQAIDAILHSPQVSDEIKNRIRHIIRTKGELSFYDVFDLAYPE 154
 
Name Accession Description Interval E-value
YlaC pfam10777
Inner membrane protein YlaC; Members of this family include proteins annotated as inner ...
1-153 1.14e-70

Inner membrane protein YlaC; Members of this family include proteins annotated as inner membrane protein YlaC in E. coli and Salmonella. The function of this family is unknown.


Pssm-ID: 431490  Cd Length: 154  Bit Score: 209.50  E-value: 1.14e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695698    1 MTEIQRLLTATIDDLNLREKRDNRPRFSISFIRKHPGLFVAMYAAWLATLIVMLKSETL-VDSVWLLVVLFVVFNAFFFF 79
Cdd:pfam10777   1 MDEIKRLLTEDIERINRQEKRDGKPRFSSSFIRNHPYLCLAMLVSYLAVLVLMYYSPYFgLGSLIGFTVLFIVMSAVLLF 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 504695698   80 DVNPRYRYEDIDVLDFRVCYNGEWYNTRFVPAELIESIMHSPAVETVQKEKLQKMVSTKGQLSFYDVFTLSRPA 153
Cdd:pfam10777  81 DIKPVYRFEDIGVLDLRVCYNGEWFNSRHVSPQAIDAILHSPQVSDEIKNRIRHIIRTKGELSFYDVFDLAYPE 154
 
Name Accession Description Interval E-value
YlaC pfam10777
Inner membrane protein YlaC; Members of this family include proteins annotated as inner ...
1-153 1.14e-70

Inner membrane protein YlaC; Members of this family include proteins annotated as inner membrane protein YlaC in E. coli and Salmonella. The function of this family is unknown.


Pssm-ID: 431490  Cd Length: 154  Bit Score: 209.50  E-value: 1.14e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504695698    1 MTEIQRLLTATIDDLNLREKRDNRPRFSISFIRKHPGLFVAMYAAWLATLIVMLKSETL-VDSVWLLVVLFVVFNAFFFF 79
Cdd:pfam10777   1 MDEIKRLLTEDIERINRQEKRDGKPRFSSSFIRNHPYLCLAMLVSYLAVLVLMYYSPYFgLGSLIGFTVLFIVMSAVLLF 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 504695698   80 DVNPRYRYEDIDVLDFRVCYNGEWYNTRFVPAELIESIMHSPAVETVQKEKLQKMVSTKGQLSFYDVFTLSRPA 153
Cdd:pfam10777  81 DIKPVYRFEDIGVLDLRVCYNGEWFNSRHVSPQAIDAILHSPQVSDEIKNRIRHIIRTKGELSFYDVFDLAYPE 154
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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