|
Name |
Accession |
Description |
Interval |
E-value |
| secD |
PRK05812 |
preprotein translocase subunit SecD; Reviewed |
12-566 |
1.58e-129 |
|
preprotein translocase subunit SecD; Reviewed
Pssm-ID: 235615 [Multi-domain] Cd Length: 462 Bit Score: 388.04 E-value: 1.58e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 12 RYLTLFLVLLIGVYLLV-------------FLTGDKQAKPKLGIDLQGGTRVTLTARTPDG------------------- 59
Cdd:PRK05812 2 KYLLILLVLLIGLLYALpnlrgalapatpeWLPALGAKPMKLGLDLRGGVHFLLEVDMDDAlkkrlesladdlrsllrek 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 60 -----------------------------------SAPTRDALNQAQQIISARVNGLGVSGSEVIIDGSN-LVITVPG-N 102
Cdd:PRK05812 82 kiryggveitfrdaedrdkaiallrklsslteaelKEITEEALEQAIEIIRNRVNELGVAEPVIQRQGADrIVVELPGvQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 103 DSSEARN-LGQTARLYIRPVihvisaqgqgqqppgaappgappgtppgappgapgmppgapvspiapaepgapvsppspa 181
Cdd:PRK05812 162 DTARAKEiLGKTATLEFRLV------------------------------------------------------------ 181
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 182 eqvppaappaqtpapqprpypqeppptpapppppgpgappapgappprdkqtlaqriadekqlrqssdqqiqilalqfqa 261
Cdd:PRK05812 --------------------------------------------------------------------------------
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 262 trcgdedvlagnddpnlplvtcsqdgkqvylldKAIIKGEQIKNADSGLDQQrGEYVVTVEFNDEASRIWADFTAANIGT 341
Cdd:PRK05812 182 ---------------------------------PVILTGDDITDASASFDQQ-GQPVVNITLDSEGAKKFADITKANIGK 227
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 342 QTAFVLDSKVVSAPEIQEAIPGGRTQITGHFTADSARELANVLKYGSLPLSFESSEAETVSATLGLSSLRAGLIAGAIGL 421
Cdd:PRK05812 228 RMAIVLDGEVISAPVIQSAITGGSAQITGNFTAEEARDLALLLRAGALPAPLEIVEERTIGPSLGADSIRAGLIAGLIGL 307
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 422 AAVLLYSLLYYRVLGLLTALSLVASGAMVFAILVLLGryinYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSF 501
Cdd:PRK05812 308 ALVLLFMILYYRLFGLIANIALVANLVLILAVLSLLG----ATLTLPGIAGIVLTIGMAVDANVLIFERIREELREGRSL 383
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 505119535 502 RSAVPRGWARARKTILSGNAVTFLAAAVLYVLAVGQVKGFAFTLGLTTILDVVVVFLVTWPLVYL 566
Cdd:PRK05812 384 RSAIEAGFKRAFSTILDSNITTLIAAIILYALGTGPVKGFAVTLGIGILTSMFTAITVTRALVNL 448
|
|
| SecD |
COG0342 |
Preprotein translocase subunit SecD [Intracellular trafficking, secretion, and vesicular ... |
12-575 |
6.28e-122 |
|
Preprotein translocase subunit SecD [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440111 [Multi-domain] Cd Length: 434 Bit Score: 367.13 E-value: 6.28e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 12 RYLTLFLVLLIGVYLLvfltGDKQAKPKLGIDLQGGTRVTLTARTPDG--------SAPTRDALNQAQQIISARVNGLGV 83
Cdd:COG0342 9 RLLLLLLVVALSLVAP----NGPAKPIKLGLDLQGGVHLLLEVDTDAAldedgdgiREVTEEALDQAIEILRNRVNELGV 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 84 SGSEVIIDGSN-LVITVPG-NDSSEARN-LGQTARLYIRPVihvisaqgqgqqppgaappgappgtppgappgapgmppg 160
Cdd:COG0342 85 SEPVIQRQGDDrIVVELPGvQDPAEAKElLGKTAKLEFRLV--------------------------------------- 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 161 apvspiapaepgapvsppspaeqvppaappaqtpapqprpypqeppptpapppppgpgappapgappprdkqtlaqriad 240
Cdd:COG0342 --------------------------------------------------------------------------------
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 241 ekqlrqssdqqiqilalqfqatrcgDEDVLAGNDDPNLPLVTCSQDGKQVYLLDKAIIKGEQIKNADSGLDQQRGEYVVT 320
Cdd:COG0342 126 -------------------------DDSADAQAAVPAGSELLPCRDGQPYLLLGPVVLTGDDLTDASAGFDQQTGQPVVS 180
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 321 VEFNDEASRIWADFTAANIGTQTAFVLDSKVVSAPEIQEAIPGGRTQITGHFTADSARELANVLKYGSLPLSFESSEAET 400
Cdd:COG0342 181 FTLDSEGAKKFADATRENVGKPLAIVLDGEVISAPVIQEPITGGSAQITGSFTVEEAQDLALLLRAGALPAPLEIVEERT 260
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 401 VSATLGLSSLRAGLIAGAIGLAAVLLYSLLYYRVLGLLTALSLVASGAMVFAILVLLGryinYTLDlagiagliigigTT 480
Cdd:COG0342 261 VGPTLGADSIEKGLIAGLIGLLLVALFMLLYYRLPGLVANIALALNVVLLLGVLSLLG----ATLTlpgiagiiltigMA 336
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 481 ADSFVVFFERIKDEIREGRSFRSAVPRGWARARKTILSGNAVTFLAAAVLYVLAVGQVKGFAFTLGLTTILDVVVVFLVT 560
Cdd:COG0342 337 VDANVLIFERIREELRAGRSLRAAIEAGFKRAFSTILDANVTTLIAAVVLFVLGTGPVKGFAVTLILGILISMFTAVPVT 416
|
570
....*....|....*
gi 505119535 561 WPLVYLASKSPTLAK 575
Cdd:COG0342 417 RPLLNLLLGRRRLKK 431
|
|
| secD |
TIGR01129 |
protein-export membrane protein SecD; Members of this family are highly variable in length ... |
40-564 |
5.83e-111 |
|
protein-export membrane protein SecD; Members of this family are highly variable in length immediately after the well-conserved motif LGLGLXGG at the amino-terminal end of this model. Archaeal homologs are not included in the seed and score between the trusted and noise cutoffs. SecD from Mycobacterium tuberculosis has a long Pro-rich insert. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273456 [Multi-domain] Cd Length: 397 Bit Score: 337.72 E-value: 5.83e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 40 LGIDLQGGTRVTLTARTPDG----------SAPTRDALNQAQQIISARVNGLGVSGSEVIIDGSN-LVITVPG-NDSSEA 107
Cdd:TIGR01129 1 LGLDLRGGARVLLEVDMSTAvvlklseaevNAIRKDALEQVITILRNRVNALGVSEPVVQRQGKDrIVVELPGvTDTSRA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 108 RN-LGQTARLYIRPVihvisaqgqgqqppgaappgappgtppgappgapgmppgapvspiapaepgapvsppspaeqvpp 186
Cdd:TIGR01129 81 KDiLGGTATLEFRLV----------------------------------------------------------------- 95
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 187 aappaqtpapqprpypqeppptpapppppgpgappapgapppRDKQTlaqriadekqlrqssdqqiqilalqfqatrcGD 266
Cdd:TIGR01129 96 ------------------------------------------DDEST-------------------------------SP 102
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 267 EDVLAGNDD-PNLPLVTCSQDGKQVYLLDKAIIKGEQIKNADSGLDQQRGEYVVTVEFNDEASRIWADFTAANIGTQTAF 345
Cdd:TIGR01129 103 DDALAGNVPaGSELLDSRSGDPKYYLLKKSPVLTGDHITDATSSVDQRSGQPVVSFSLDSEGARIFGDFTQANIGKRLAI 182
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 346 VLDSKVVSAPEIQEAIPGGRTQITGHFTADSARELANVLKYGSLPLSFESSEAETVSATLGLSSLRAGLIAGAIGLAAVL 425
Cdd:TIGR01129 183 VLDNKVVSAPTIQEAITGGSGQITGNFTAEEANDLALVLRSGALPAPLQILEERTIGPSLGADSIEAGIKAGLIGLVLVL 262
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 426 LYSLLYYRVLGLLTALSLVASgamVFAILVLLGRYiNYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSFRSAV 505
Cdd:TIGR01129 263 VFMILYYRLFGLIAAIALVIN---IVLILAILSAF-GATLTLPGIAGLILTIGMAVDANVLIYERIKEELRLGKSVRQAI 338
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 505119535 506 PRGWARARKTILSGNAVTFLAAAVLYVLAVGQVKGFAFTLGLTTILDVVVVFLVTWPLV 564
Cdd:TIGR01129 339 EAGFERAFSTIFDANITTLIAALILYVFGTGPVKGFAVTLAIGIIASLFTALVFTRLLL 397
|
|
| RND_1 |
NF037998 |
protein translocase SecDF, variant type; Members of this family are identified by TCDB as ... |
373-570 |
3.31e-07 |
|
protein translocase SecDF, variant type; Members of this family are identified by TCDB as belonging to 2.A.6.4.4, a variant 12-TM type SecDF, as found in Spiroplasma, Mesoplasma, and Acholeplasma.
Pssm-ID: 468306 Cd Length: 1237 Bit Score: 53.63 E-value: 3.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 373 TADSARELANVLKYGSLPLSFESSEAETVSATLGLSSLRAGLIAGAIGLAAVLLYSLLYYRVLGLLTALSLVASGAMVFA 452
Cdd:NF037998 407 TETIARTIEALINQTTSGFTFKVNGISEFNPVVTLLMLIASIIFLLILAIAIMIYLLFAYRLLGLFAIIIALTSISLTLY 486
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 453 ILVLLGryinYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEI-REGRSFRSAVPRGWARARKTILSGNAVTFLAAAVLY 531
Cdd:NF037998 487 SPTWFG----LAIGPESITAIFIAIGLVLESCSLLFEAFKKHLyKNKRSIEESFKIANKETIGIIVDALVVLLIPNLSLF 562
|
170 180 190
....*....|....*....|....*....|....*....
gi 505119535 532 VLAVGQVKGFAFTLGLTTILDVVVVFLVTWPLVYLASKS 570
Cdd:NF037998 563 WIGSNSIKSFATILLVGVIISLVLVIIVARLMIWLTIKL 601
|
|
| SecD_SecF |
pfam02355 |
Protein export membrane protein; This family consists of various prokaryotic SecD and SecF ... |
392-553 |
3.39e-03 |
|
Protein export membrane protein; This family consists of various prokaryotic SecD and SecF protein export membrane proteins. This SecD and SecF proteins are part of the multimeric protein export complex comprising SecA, D, E, F, G, Y, and YajC. SecD and SecF are required to maintain a proton motive force.
Pssm-ID: 280510 [Multi-domain] Cd Length: 189 Bit Score: 39.13 E-value: 3.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 392 SFESSEAETVSATLGLSSLRAGLIAGAIGLAAVLLYSLLYYR-----------------VLGLLTALSLVASGAMVFAIL 454
Cdd:pfam02355 12 DAEIISIETVGPTVGSELARKAVLALLFALLLILIYVGLRFEwrfalgaiialahdviiTVGVFSLFGIEVDLATVAALL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 455 VLLGRYINYTldlagiagliigigttadsfVVFFERIKDEIRegRSFRSAVPRGWARARKTILSGN----AVTFLAAAVL 530
Cdd:pfam02355 92 TIIGYSVNDT--------------------VVVFDRVRENLR--KKTRATLNEIMNLSINQTLTRTintsLTTLLVVVAL 149
|
170 180
....*....|....*....|...
gi 505119535 531 YVLAVGQVKGFAFTLGLTTILDV 553
Cdd:pfam02355 150 FVFGGGSLKDFSLALLVGVIVGT 172
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| secD |
PRK05812 |
preprotein translocase subunit SecD; Reviewed |
12-566 |
1.58e-129 |
|
preprotein translocase subunit SecD; Reviewed
Pssm-ID: 235615 [Multi-domain] Cd Length: 462 Bit Score: 388.04 E-value: 1.58e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 12 RYLTLFLVLLIGVYLLV-------------FLTGDKQAKPKLGIDLQGGTRVTLTARTPDG------------------- 59
Cdd:PRK05812 2 KYLLILLVLLIGLLYALpnlrgalapatpeWLPALGAKPMKLGLDLRGGVHFLLEVDMDDAlkkrlesladdlrsllrek 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 60 -----------------------------------SAPTRDALNQAQQIISARVNGLGVSGSEVIIDGSN-LVITVPG-N 102
Cdd:PRK05812 82 kiryggveitfrdaedrdkaiallrklsslteaelKEITEEALEQAIEIIRNRVNELGVAEPVIQRQGADrIVVELPGvQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 103 DSSEARN-LGQTARLYIRPVihvisaqgqgqqppgaappgappgtppgappgapgmppgapvspiapaepgapvsppspa 181
Cdd:PRK05812 162 DTARAKEiLGKTATLEFRLV------------------------------------------------------------ 181
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 182 eqvppaappaqtpapqprpypqeppptpapppppgpgappapgappprdkqtlaqriadekqlrqssdqqiqilalqfqa 261
Cdd:PRK05812 --------------------------------------------------------------------------------
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 262 trcgdedvlagnddpnlplvtcsqdgkqvylldKAIIKGEQIKNADSGLDQQrGEYVVTVEFNDEASRIWADFTAANIGT 341
Cdd:PRK05812 182 ---------------------------------PVILTGDDITDASASFDQQ-GQPVVNITLDSEGAKKFADITKANIGK 227
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 342 QTAFVLDSKVVSAPEIQEAIPGGRTQITGHFTADSARELANVLKYGSLPLSFESSEAETVSATLGLSSLRAGLIAGAIGL 421
Cdd:PRK05812 228 RMAIVLDGEVISAPVIQSAITGGSAQITGNFTAEEARDLALLLRAGALPAPLEIVEERTIGPSLGADSIRAGLIAGLIGL 307
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 422 AAVLLYSLLYYRVLGLLTALSLVASGAMVFAILVLLGryinYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSF 501
Cdd:PRK05812 308 ALVLLFMILYYRLFGLIANIALVANLVLILAVLSLLG----ATLTLPGIAGIVLTIGMAVDANVLIFERIREELREGRSL 383
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 505119535 502 RSAVPRGWARARKTILSGNAVTFLAAAVLYVLAVGQVKGFAFTLGLTTILDVVVVFLVTWPLVYL 566
Cdd:PRK05812 384 RSAIEAGFKRAFSTILDSNITTLIAAIILYALGTGPVKGFAVTLGIGILTSMFTAITVTRALVNL 448
|
|
| SecD |
COG0342 |
Preprotein translocase subunit SecD [Intracellular trafficking, secretion, and vesicular ... |
12-575 |
6.28e-122 |
|
Preprotein translocase subunit SecD [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440111 [Multi-domain] Cd Length: 434 Bit Score: 367.13 E-value: 6.28e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 12 RYLTLFLVLLIGVYLLvfltGDKQAKPKLGIDLQGGTRVTLTARTPDG--------SAPTRDALNQAQQIISARVNGLGV 83
Cdd:COG0342 9 RLLLLLLVVALSLVAP----NGPAKPIKLGLDLQGGVHLLLEVDTDAAldedgdgiREVTEEALDQAIEILRNRVNELGV 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 84 SGSEVIIDGSN-LVITVPG-NDSSEARN-LGQTARLYIRPVihvisaqgqgqqppgaappgappgtppgappgapgmppg 160
Cdd:COG0342 85 SEPVIQRQGDDrIVVELPGvQDPAEAKElLGKTAKLEFRLV--------------------------------------- 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 161 apvspiapaepgapvsppspaeqvppaappaqtpapqprpypqeppptpapppppgpgappapgappprdkqtlaqriad 240
Cdd:COG0342 --------------------------------------------------------------------------------
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 241 ekqlrqssdqqiqilalqfqatrcgDEDVLAGNDDPNLPLVTCSQDGKQVYLLDKAIIKGEQIKNADSGLDQQRGEYVVT 320
Cdd:COG0342 126 -------------------------DDSADAQAAVPAGSELLPCRDGQPYLLLGPVVLTGDDLTDASAGFDQQTGQPVVS 180
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 321 VEFNDEASRIWADFTAANIGTQTAFVLDSKVVSAPEIQEAIPGGRTQITGHFTADSARELANVLKYGSLPLSFESSEAET 400
Cdd:COG0342 181 FTLDSEGAKKFADATRENVGKPLAIVLDGEVISAPVIQEPITGGSAQITGSFTVEEAQDLALLLRAGALPAPLEIVEERT 260
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 401 VSATLGLSSLRAGLIAGAIGLAAVLLYSLLYYRVLGLLTALSLVASGAMVFAILVLLGryinYTLDlagiagliigigTT 480
Cdd:COG0342 261 VGPTLGADSIEKGLIAGLIGLLLVALFMLLYYRLPGLVANIALALNVVLLLGVLSLLG----ATLTlpgiagiiltigMA 336
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 481 ADSFVVFFERIKDEIREGRSFRSAVPRGWARARKTILSGNAVTFLAAAVLYVLAVGQVKGFAFTLGLTTILDVVVVFLVT 560
Cdd:COG0342 337 VDANVLIFERIREELRAGRSLRAAIEAGFKRAFSTILDANVTTLIAAVVLFVLGTGPVKGFAVTLILGILISMFTAVPVT 416
|
570
....*....|....*
gi 505119535 561 WPLVYLASKSPTLAK 575
Cdd:COG0342 417 RPLLNLLLGRRRLKK 431
|
|
| secD |
TIGR01129 |
protein-export membrane protein SecD; Members of this family are highly variable in length ... |
40-564 |
5.83e-111 |
|
protein-export membrane protein SecD; Members of this family are highly variable in length immediately after the well-conserved motif LGLGLXGG at the amino-terminal end of this model. Archaeal homologs are not included in the seed and score between the trusted and noise cutoffs. SecD from Mycobacterium tuberculosis has a long Pro-rich insert. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273456 [Multi-domain] Cd Length: 397 Bit Score: 337.72 E-value: 5.83e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 40 LGIDLQGGTRVTLTARTPDG----------SAPTRDALNQAQQIISARVNGLGVSGSEVIIDGSN-LVITVPG-NDSSEA 107
Cdd:TIGR01129 1 LGLDLRGGARVLLEVDMSTAvvlklseaevNAIRKDALEQVITILRNRVNALGVSEPVVQRQGKDrIVVELPGvTDTSRA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 108 RN-LGQTARLYIRPVihvisaqgqgqqppgaappgappgtppgappgapgmppgapvspiapaepgapvsppspaeqvpp 186
Cdd:TIGR01129 81 KDiLGGTATLEFRLV----------------------------------------------------------------- 95
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 187 aappaqtpapqprpypqeppptpapppppgpgappapgapppRDKQTlaqriadekqlrqssdqqiqilalqfqatrcGD 266
Cdd:TIGR01129 96 ------------------------------------------DDEST-------------------------------SP 102
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 267 EDVLAGNDD-PNLPLVTCSQDGKQVYLLDKAIIKGEQIKNADSGLDQQRGEYVVTVEFNDEASRIWADFTAANIGTQTAF 345
Cdd:TIGR01129 103 DDALAGNVPaGSELLDSRSGDPKYYLLKKSPVLTGDHITDATSSVDQRSGQPVVSFSLDSEGARIFGDFTQANIGKRLAI 182
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 346 VLDSKVVSAPEIQEAIPGGRTQITGHFTADSARELANVLKYGSLPLSFESSEAETVSATLGLSSLRAGLIAGAIGLAAVL 425
Cdd:TIGR01129 183 VLDNKVVSAPTIQEAITGGSGQITGNFTAEEANDLALVLRSGALPAPLQILEERTIGPSLGADSIEAGIKAGLIGLVLVL 262
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 426 LYSLLYYRVLGLLTALSLVASgamVFAILVLLGRYiNYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSFRSAV 505
Cdd:TIGR01129 263 VFMILYYRLFGLIAAIALVIN---IVLILAILSAF-GATLTLPGIAGLILTIGMAVDANVLIYERIKEELRLGKSVRQAI 338
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 505119535 506 PRGWARARKTILSGNAVTFLAAAVLYVLAVGQVKGFAFTLGLTTILDVVVVFLVTWPLV 564
Cdd:TIGR01129 339 EAGFERAFSTIFDANITTLIAALILYVFGTGPVKGFAVTLAIGIIASLFTALVFTRLLL 397
|
|
| PRK13024 |
PRK13024 |
bifunctional preprotein translocase subunit SecD/SecF; Reviewed |
14-581 |
1.42e-72 |
|
bifunctional preprotein translocase subunit SecD/SecF; Reviewed
Pssm-ID: 237276 [Multi-domain] Cd Length: 755 Bit Score: 247.45 E-value: 1.42e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 14 LTLFLVLLIGVYLLVFLTGDKQakPKLGIDLQGGTRVTLTARTPD-GSAPTRDALNQAQQIISARVNGLGVSGSEVIIDG 92
Cdd:PRK13024 9 FFLTLLLLIGIYYASPKFVTKN--INLGLDLQGGFEVLLEVSPADkGKKADREALDSTVEVLRNRIDGLGVSEPNIQREG 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 93 SN-LVITVPG-NDSSEARN-LGQTARLYIRPVihvisaqgqgqqppgaappgappgtppgappgapgmppgapvspiapa 169
Cdd:PRK13024 87 NNrIRVELPGvQDPERARElLGSTAKLTFRDV------------------------------------------------ 118
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 170 epgapvsppspaeqvppaappaqtpapqprpypqeppptpapppppgpgappapgappprdkqtlaqriadekqlrqssd 249
Cdd:PRK13024 --------------------------------------------------------------------------------
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 250 qqiqilalqfqatrcgdedvlAGNDDPNLPLVTCSQDGKQVYL-LDKAIIKGEQIKNADSGLDQQ-RGEYVVTVEFNDEA 327
Cdd:PRK13024 119 ---------------------TDPPPPGVGGPVVGPDEGKDTAvLNPVLLSGDDLTDAGAKFDQDqTNRPSVSLKLKSEG 177
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 328 SRIWADFTAANIGTQT-----AFVLDSKVVSAPEIQEAIPGGRTQITGHFTADSARELANVLKYGSLPLSFESSEAETVS 402
Cdd:PRK13024 178 AKKWAKVTEKNSKKGPpnnriAIVLDPKVISAPTVNQPINGGSVQISGNFTVEEAKDLANLLNAGALPAPLKIIESRSVG 257
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 403 ATLGLSSLRAGLIAGAIGLAAVLLYSLLYYRVLGLLTALSLVASGAMVFAILVLLGRyiNYTLdlagiagliigiGTTA- 481
Cdd:PRK13024 258 PTLGQDAIDAGIIAGIIGFALIFLFMLVYYGLPGLIANIALLLYIFLTLGALSSLGA--VLTL------------PGIAg 323
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 482 ---------DSFVVFFERIKDEIREGRSFRSAVPRGWARARKTILSGNAVTFLAAAVLYVLAVGQVKGFAFTLGLTTILD 552
Cdd:PRK13024 324 lvlgigmavDANVLIFERIKEELRKGKSLKKAFKKGFKNAFSTILDSNITTLIAAAILFFFGTGPVKGFATTLIIGILAS 403
|
570 580 590
....*....|....*....|....*....|
gi 505119535 553 VVV-VFLVTWPLVYLASKSPTlaKPAFNGL 581
Cdd:PRK13024 404 LFTaVFLTRLLLELLVKRGDK--KPFLFGV 431
|
|
| PRK14726 |
PRK14726 |
protein translocase subunit SecDF; |
269-564 |
2.41e-53 |
|
protein translocase subunit SecDF;
Pssm-ID: 237805 [Multi-domain] Cd Length: 855 Bit Score: 195.71 E-value: 2.41e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 269 VLAGNDDPNLPlvtcsqdgkqvYLLDK-AIIKGEQIKNADSGLDQQRGEYVVTVEFNDEASRIWADFTAANIGTQTAFVL 347
Cdd:PRK14726 240 VLYSLDDPPVP-----------YLVERrAFVSGENLVDAQPVFDPQTNEPVVTFRLDAEGTQRFAQATQQNVGKHFAIVL 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 348 DSKVVSAPEIQEAIPGGRTQITGHFTADSARELANVLKYGSLPLSFESSEAETVSATLGLSSLRAGLIAGAIGLAAVLLY 427
Cdd:PRK14726 309 DGQVISAPVIDEAITGGEGRISGNFSEQGANDLAVLLRAGALPATLTVVEERTVGPGLGADSIAAGLVAGLIAAILVAAL 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 428 SLLYYRVLGLLTALSLVASGAMVFAILVLLGRyinyTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSFRSAVPR 507
Cdd:PRK14726 389 MIGFYGFLGVIAVIALIVNVVLIIAVLSLLGA----TLTLPGIAGIVLTIGMAVDSNVLIYERIREEEKTGHSLIQALDR 464
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 505119535 508 GWARARKTILSGNAVTFLAAAVLYVLAVGQVKGFAFTLGLTTILDVVVVFLVTWPLV 564
Cdd:PRK14726 465 GFSRALATIVDANVTILIAAVILFFLGSGAVRGFAVTLAVGILTTVFTAFTLTRSLV 521
|
|
| 2A0604s01 |
TIGR00916 |
protein-export membrane protein, SecD/SecF family; The SecA,SecB,SecD,SecE,SecF,SecG and SecY ... |
323-557 |
1.13e-39 |
|
protein-export membrane protein, SecD/SecF family; The SecA,SecB,SecD,SecE,SecF,SecG and SecY proteins form the protein translocation appartus in prokaryotes. This family is specific for the SecD and SecF proteins. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273336 [Multi-domain] Cd Length: 192 Bit Score: 143.55 E-value: 1.13e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 323 FNDEASRIWADFtAANIGTQTAFVLDSKVVSAPEIQeaipggrtqitghftadsarelanvlkygslplsfesseaeTVS 402
Cdd:TIGR00916 1 LDEEGAKIFADF-AANIGKPAIVLDNAKVISAPVVG-----------------------------------------TVG 38
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 403 ATLGLSSLRAGLIAGAIGLAAVLLYSLLYYRVLGLLTALSLVASGamVFAILVLLGRYInYTLDLAGIAGLIIGIGTTAD 482
Cdd:TIGR00916 39 PTLGGELIKAGIIALLIGLVLVLLYMLLRYEWRGAIAAIAALVHD--VILILGVLSLFG-ATLTLPGIAGLLTIIGYSVD 115
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 505119535 483 SFVVFFERIKDEIR--EGRSFRSAVPRGWARARKTILSGNAVTFLAAAVLYVLAVGQVKGFAFTLGLTTILDVVVVF 557
Cdd:TIGR00916 116 DTVVIFDRIREELRkyKGRTFREAINLGINQTLSRIIDTNVTTLLAVLALYVFGGGAIKGFALTLGIGVIAGTYSSI 192
|
|
| secD |
PRK12933 |
protein translocase subunit SecD; |
285-547 |
2.25e-36 |
|
protein translocase subunit SecD;
Pssm-ID: 183831 [Multi-domain] Cd Length: 604 Bit Score: 143.67 E-value: 2.25e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 285 QDGKQVYLLDKAIIKGEQIKNADSGLDQQrGEYVVTVEFNDEASRIWADFTAANIGTQTAFVLD-------------SKV 351
Cdd:PRK12933 303 KNGRPVYVARRPVLGGEHIVDARASLGEM-GMAEVNISLDRAGGKKMSDFSRDNIGKPMATSYSeysrdeqgktkqsEEV 381
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 352 VSAPEIQEAIpGGRTQITGHFTADSARELANVLKYGSLPLSFESSEAETVSATLGLSSLRAGLIAGAIGLAAVLLYSLLY 431
Cdd:PRK12933 382 ISVATIQSQL-GDRFRITGAGSYQEAQQLALLLRAGSLTAPVTIVEERTIGPSLGAENIENGFAALALGMGITLLFMALW 460
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 432 YRVLGLLTALSLVASGAMVFAILVLLGryiNYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEIREGRSFRSAVPRGWAR 511
Cdd:PRK12933 461 YRRLGWVANVALIANMVCLFGLLALIP---GAVLTLPGIAGLVLTVGMAVDTNVLIFERIKDKLKEGRSFAQAIDTGFDS 537
|
250 260 270
....*....|....*....|....*....|....*.
gi 505119535 512 ARKTILSGNAVTFLAAAVLYVLAVGQVKGFAFTLGL 547
Cdd:PRK12933 538 AFSTIFDANFTTMITAVVLYSIGNGPIQGFALTLGL 573
|
|
| PRK13023 |
PRK13023 |
protein translocase subunit SecDF; |
267-557 |
4.51e-28 |
|
protein translocase subunit SecDF;
Pssm-ID: 171842 [Multi-domain] Cd Length: 758 Bit Score: 119.72 E-value: 4.51e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 267 EDVLAGNDDPNLPLVTCSQDGKQVYLLDKA-IIKGEQIKNADSGLDQQRGEYVVTVEFNDEASRIWADFTAANIGTQTAF 345
Cdd:PRK13023 133 DDAIRGTPPADSEIVYSFDDPPVGYLLKKTpILTGHDITDAKASISADDGQPVITLTLDDNGRRRLADLTAQGNENSFAI 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 346 VLDSKVVSAPEIQEAIPGGRTQITGHFTADSARELANVLKYGSLPLSFESSEAETVSATLGLSSLRAGLIAGAIGLAAVL 425
Cdd:PRK13023 213 VVDNQVVSAPTVSGPLDTSELQIEGAFDLQAANNMAVVLRSGALPQAVTVLEERTIASALGEDYASAAVLAALLAALVVG 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 426 LYSLLYYRVLGLLTALSLVASGAMVFAILVLLGRYINYTldlaGIAGLIIGIGTTADSFVVFFERIKDEIREGRSFRSAV 505
Cdd:PRK13023 293 LFMVLSYGILGVIALVALVVNIIILTAVLSLIGASISLA----SIAGLVLTIGLAVDAHILIYERVREDRRKGYSVVQAM 368
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 505119535 506 PRGWARARKTILSGNAVTFLAAAVLYVLAVGQVKGFAFT--LGLTTILDVVVVF 557
Cdd:PRK13023 369 ESGFYRALSTIVDANLTTLIAALVLFLLGSGTVHGFALTvaIGIGTTLFTTLTF 422
|
|
| PRK12911 |
PRK12911 |
bifunctional preprotein translocase subunit SecD/SecF; Reviewed |
336-561 |
4.88e-20 |
|
bifunctional preprotein translocase subunit SecD/SecF; Reviewed
Pssm-ID: 171815 [Multi-domain] Cd Length: 1403 Bit Score: 94.93 E-value: 4.88e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 336 AANIGTQTAFVLDSKVVSAPeIQEAIPGGRTQITGHFTADSARELANVLKYGSLPLSFESSEAETVSATLGLSSLRAGLI 415
Cdd:PRK12911 835 SGGRGWRMAVVLDGYVVSDP-VLNVPLKDHASVSGKFSHREVHRLATDLKSGAMSFVPEVLSEEVISPELGKSQRTQGII 913
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 416 AGAIGLAAVLLYSLLYYRVLGLltalslVASGAMVFAILVLLG--RYINYTLDLAGIAGLIIGIGTTADSFVVFFERIKD 493
Cdd:PRK12911 914 SVCLGLAVLIVLMSVYYRFGGV------IASGAVLLNLLLIWAalQYLDAPLTLSGLAGIVLAMGMAVDANVLVFERIRE 987
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 505119535 494 EIREGRSFRSAVPRGWARARKTILSGNAVTFLAAAVLYVLAVGQVKGFAFTL------GLTTILDVVVVFLVTW 561
Cdd:PRK12911 988 EYLLSRSLSESVEAGYKKAFSAIFDSNLTTILASALLLMLDTGPIKGFALTLiigifsSMFTALFMTKFFFMIW 1061
|
|
| secD |
PRK08343 |
preprotein translocase subunit SecD; Reviewed |
281-562 |
4.33e-15 |
|
preprotein translocase subunit SecD; Reviewed
Pssm-ID: 236245 [Multi-domain] Cd Length: 417 Bit Score: 77.61 E-value: 4.33e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 281 VTCSQDGKQVYlldkaiiKGEQIKNADS-GLDQQRGEYVVTVEFNDEASRIWAD------FTAANIGTQTAFVLDSKVVS 353
Cdd:PRK08343 121 QTPGNNNETVL-------TGDDIESVGSpSQDPSGGAWGVPFTLSEDGAEKFAEvakgkgATDDPSGHPLDMYLDGELIY 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 354 APEIQE----AIPGGRTQITGHFTA------DSARELANVLKYGSLP--LSFESSEaeTVSATLGLSSLRAGLIAGAIGL 421
Cdd:PRK08343 194 AAPLSPdlasGLASGPVVITVGSTGtteeakEEAKELYIHLRSGALPvkLDIEGSG--SVSPSLGEQFKKGSLIAGLLAL 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 422 AAVLLYSLLYYR---VLG--LLTALSLVasgamvfaiLVLLG--RYINYTLDLAGIAGLIIGIGTTADSFVVfferIKDE 494
Cdd:PRK08343 272 LAVALVVFLRYReprIALpmVITSLSEV---------IIILGfaALIGWQLDLASIAGIIAVIGTGVDDLII----ITDE 338
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 495 I--REGRSFRSAVPRGWARARKTILSGNAVTFLAAAVLYVLAVGQVKGFAFtlglTTILDVVVVFLVTWP 562
Cdd:PRK08343 339 VlhEGKVPSRKVFLSRIKRAFFIIFAAAATTIAAMSPLAVMGLGDLKGFAI----TTILGVLIGVLITRP 404
|
|
| RND_1 |
NF037998 |
protein translocase SecDF, variant type; Members of this family are identified by TCDB as ... |
373-570 |
3.31e-07 |
|
protein translocase SecDF, variant type; Members of this family are identified by TCDB as belonging to 2.A.6.4.4, a variant 12-TM type SecDF, as found in Spiroplasma, Mesoplasma, and Acholeplasma.
Pssm-ID: 468306 Cd Length: 1237 Bit Score: 53.63 E-value: 3.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 373 TADSARELANVLKYGSLPLSFESSEAETVSATLGLSSLRAGLIAGAIGLAAVLLYSLLYYRVLGLLTALSLVASGAMVFA 452
Cdd:NF037998 407 TETIARTIEALINQTTSGFTFKVNGISEFNPVVTLLMLIASIIFLLILAIAIMIYLLFAYRLLGLFAIIIALTSISLTLY 486
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 453 ILVLLGryinYTLDLAGIAGLIIGIGTTADSFVVFFERIKDEI-REGRSFRSAVPRGWARARKTILSGNAVTFLAAAVLY 531
Cdd:NF037998 487 SPTWFG----LAIGPESITAIFIAIGLVLESCSLLFEAFKKHLyKNKRSIEESFKIANKETIGIIVDALVVLLIPNLSLF 562
|
170 180 190
....*....|....*....|....*....|....*....
gi 505119535 532 VLAVGQVKGFAFTLGLTTILDVVVVFLVTWPLVYLASKS 570
Cdd:NF037998 563 WIGSNSIKSFATILLVGVIISLVLVIIVARLMIWLTIKL 601
|
|
| PRK13024 |
PRK13024 |
bifunctional preprotein translocase subunit SecD/SecF; Reviewed |
317-566 |
3.40e-04 |
|
bifunctional preprotein translocase subunit SecD/SecF; Reviewed
Pssm-ID: 237276 [Multi-domain] Cd Length: 755 Bit Score: 43.68 E-value: 3.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 317 YVVTVEFNDEASRIWADFTAANIGTQTAFVLDSK----VVSAPEIQEAIPGGRTQITGhftadsarELANVLKyGSLPLS 392
Cdd:PRK13024 490 YEIRTDQPVDLEQVRADLKELGLGEVNIVTFGSDnnqvLVRTYGILSDDEEADTEIVA--------KLKNALK-NDKGGT 560
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 393 FESSEaeTVSATLGLSSLRAGLIAGAIGLAAVLLYSLLYYR-----------------VLGLLTALSLVASGAMVFAILV 455
Cdd:PRK13024 561 IPSSE--TVGPTVGKELARNAIIAVLIALIGILLYILIRFEwtfslgailallhdvliVIGFFSLFRLEVDLTFIAAILT 638
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 456 LLGRYINYTldlagiagliigigttadsfVVFFERIKDEIREGR----------SFRSAVPRgwararkTILSGnAVTFL 525
Cdd:PRK13024 639 IIGYSINDT--------------------VVVFDRIRENLRLYKkkdlreivnkSINQTLSR-------TINTS-LTTLL 690
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 505119535 526 AAAVLYVLAVGQVKGFAFTLglttILDVVV-----VFLVTWPLVYL 566
Cdd:PRK13024 691 VLLALLIFGGSSLRNFSLAL----LVGLIVgtyssIFIAAPLWLDL 732
|
|
| SecF |
COG0341 |
Preprotein translocase subunit SecF [Intracellular trafficking, secretion, and vesicular ... |
346-545 |
1.07e-03 |
|
Preprotein translocase subunit SecF [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440110 [Multi-domain] Cd Length: 291 Bit Score: 41.19 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 346 VLDSKVVSAPEIQEAIPGG----RTQITGHFTADSARELANVLK--YGSlplsFESSEAETVSATLGLSSLRAGLIAGAI 419
Cdd:COG0341 66 ALEEAGLGDASVQTFGSDNdvliRTPPLDGESAEEVEKVRAALKeaFGD----VEIVRVEFVGPTVGKELTRKALLALLV 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 420 GLAAVLLYSLLYYR-----------------VLGLLTALSLVASGAMVFAILVLLGRYINytldlagiagliigigttaD 482
Cdd:COG0341 142 ALIGILIYIAFRFEwrfavgavvallhdvliTLGIFSLFGLEFDLTFIAALLTIIGYSLN-------------------D 202
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 505119535 483 SFVVFferikDEIRE------GRSFRSAV--------PRgwararkTILSGnAVTFLAAAVLYVLAVGQVKGFAFTL 545
Cdd:COG0341 203 TVVVF-----DRIREnlrkyrKMTLAEIInlsinqtlSR-------TINTS-LTTLLVVLALLFFGGETLRDFALAL 266
|
|
| SecD_SecF |
pfam02355 |
Protein export membrane protein; This family consists of various prokaryotic SecD and SecF ... |
392-553 |
3.39e-03 |
|
Protein export membrane protein; This family consists of various prokaryotic SecD and SecF protein export membrane proteins. This SecD and SecF proteins are part of the multimeric protein export complex comprising SecA, D, E, F, G, Y, and YajC. SecD and SecF are required to maintain a proton motive force.
Pssm-ID: 280510 [Multi-domain] Cd Length: 189 Bit Score: 39.13 E-value: 3.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 392 SFESSEAETVSATLGLSSLRAGLIAGAIGLAAVLLYSLLYYR-----------------VLGLLTALSLVASGAMVFAIL 454
Cdd:pfam02355 12 DAEIISIETVGPTVGSELARKAVLALLFALLLILIYVGLRFEwrfalgaiialahdviiTVGVFSLFGIEVDLATVAALL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505119535 455 VLLGRYINYTldlagiagliigigttadsfVVFFERIKDEIRegRSFRSAVPRGWARARKTILSGN----AVTFLAAAVL 530
Cdd:pfam02355 92 TIIGYSVNDT--------------------VVVFDRVRENLR--KKTRATLNEIMNLSINQTLTRTintsLTTLLVVVAL 149
|
170 180
....*....|....*....|...
gi 505119535 531 YVLAVGQVKGFAFTLGLTTILDV 553
Cdd:pfam02355 150 FVFGGGSLKDFSLALLVGVIVGT 172
|
|
| |
