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Conserved domains on  [gi|505177760|ref|WP_015364862|]
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MULTISPECIES: recombination regulator RecX [Staphylococcus]

Protein Classification

regulatory protein RecX( domain architecture ID 10014591)

regulatory protein RecX modulates RecA activities (both recombinase and coprotease) through direct physical interaction

CATH:  1.10.10.10
Gene Ontology:  GO:0006282
PubMed:  18650935

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
recX PRK14135
recombination regulator RecX; Provisional
4-266 1.32e-105

recombination regulator RecX; Provisional


:

Pssm-ID: 237619 [Multi-domain]  Cd Length: 263  Bit Score: 307.14  E-value: 1.32e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505177760   4 ITKLEVQKKNKERFNLYLDNEFEMGIDIDTLVKFNLKKDQILEPSDMEQIQKHDHYRRGLNDAIQFLSYRKRTEKEVRQH 83
Cdd:PRK14135   1 ITKITVQKKNKERYNIFLDEKYAFSVDEDTLVKFMLKKGKELDEEDLEEIQYADQVSKGKNLALYYLSYQMRTEKEVRDY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505177760  84 LLKNEVSEGAIQQVIDYCYQEKLIDHDDYAESLKNTMINTTDKGPEIYKQKLYQAGIEPNIIDQYTEIYLEQQPLEDIVK 163
Cdd:PRK14135  81 LKKHEISEEIISEVIDKLKEEKYIDDKEYAESYVRTNINTGDKGPRVIKQKLLQKGIEDEIIEEALSEYTEEDQIEVAQK 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505177760 164 VANKVIRT-KKGPTSKLKQKVMQSLMQKGYTMERIKEAMDELDFTEDEDQLDYMLQTDLEKVYNKqQRKYEGQQVIRKTI 242
Cdd:PRK14135 161 LAEKLLKKyQKLPFKALKQKIIQSLLTKGFSYEVIKAALEELDLEQDEEEEQELLQKELEKAYRK-YSKYDGYELKQKLK 239
                        250       260
                 ....*....|....*....|....
gi 505177760 243 ETLMRKGYKYDKIKSKLEESGIEH 266
Cdd:PRK14135 240 QALYRKGFSYDDIDSFLREYGIED 263
 
Name Accession Description Interval E-value
recX PRK14135
recombination regulator RecX; Provisional
4-266 1.32e-105

recombination regulator RecX; Provisional


Pssm-ID: 237619 [Multi-domain]  Cd Length: 263  Bit Score: 307.14  E-value: 1.32e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505177760   4 ITKLEVQKKNKERFNLYLDNEFEMGIDIDTLVKFNLKKDQILEPSDMEQIQKHDHYRRGLNDAIQFLSYRKRTEKEVRQH 83
Cdd:PRK14135   1 ITKITVQKKNKERYNIFLDEKYAFSVDEDTLVKFMLKKGKELDEEDLEEIQYADQVSKGKNLALYYLSYQMRTEKEVRDY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505177760  84 LLKNEVSEGAIQQVIDYCYQEKLIDHDDYAESLKNTMINTTDKGPEIYKQKLYQAGIEPNIIDQYTEIYLEQQPLEDIVK 163
Cdd:PRK14135  81 LKKHEISEEIISEVIDKLKEEKYIDDKEYAESYVRTNINTGDKGPRVIKQKLLQKGIEDEIIEEALSEYTEEDQIEVAQK 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505177760 164 VANKVIRT-KKGPTSKLKQKVMQSLMQKGYTMERIKEAMDELDFTEDEDQLDYMLQTDLEKVYNKqQRKYEGQQVIRKTI 242
Cdd:PRK14135 161 LAEKLLKKyQKLPFKALKQKIIQSLLTKGFSYEVIKAALEELDLEQDEEEEQELLQKELEKAYRK-YSKYDGYELKQKLK 239
                        250       260
                 ....*....|....*....|....
gi 505177760 243 ETLMRKGYKYDKIKSKLEESGIEH 266
Cdd:PRK14135 240 QALYRKGFSYDDIDSFLREYGIED 263
RecX COG2137
SOS response regulatory protein OraA/RecX, interacts with RecA [Posttranslational modification, ...
55-205 5.75e-33

SOS response regulatory protein OraA/RecX, interacts with RecA [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 441740 [Multi-domain]  Cd Length: 154  Bit Score: 117.97  E-value: 5.75e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505177760  55 KHDHYRRGLNDAIQFLSYRKRTEKEVRQHLLKNEVSEGAIQQVIDYCYQEKLIDHDDYAESLKNTMINTTDKGPEIYKQK 134
Cdd:COG2137    1 KEDTEKKARNRALRLLARRERSRKELRRKLARKGFDEEEIEEVLDRLKEEGYLDDERFAESYVRSRLRRKGYGPRRIRQE 80
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 505177760 135 LYQAGIEPNIIDQYTEIYLEQQPLEDIVKVANKVIRTKKGPTS-KLKQKVMQSLMQKGYTMERIKEAMDELD 205
Cdd:COG2137   81 LRQKGIDEELIEEALEELDEEDELEAARELARKKFGSLKPLDPaKEKQKLARFLARRGFSSDLIRRVLRELL 152
RecX pfam02631
RecX family; RecX is a putative bacterial regulatory protein. The gene encoding RecX is found ...
84-203 3.06e-22

RecX family; RecX is a putative bacterial regulatory protein. The gene encoding RecX is found downstream of recA, and is thought to interact with the RecA protein.


Pssm-ID: 460631 [Multi-domain]  Cd Length: 123  Bit Score: 88.80  E-value: 3.06e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505177760   84 LLKNEVSEGAIQQVIDYCYQEKLIDHDDYAESLKNTMINTTDKGPEIYKQKLYQAGIEPNIIDQYTEiylEQQPLEDI-V 162
Cdd:pfam02631   1 LRKKGFSEEVIEEVLDRLKELGYLDDARFAESFVRSRARTRGKGPRRIRQELRQKGVDEEIIEEALE---EFDEEEQIaR 77
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 505177760  163 KVANK-VIRTKKGPTSKLKQKVMQSLMQKGYTMERIKEAMDE 203
Cdd:pfam02631  78 ELAEKkFKRYPAESDRKLKQKLIRFLARRGFSSEVIRAALQE 119
 
Name Accession Description Interval E-value
recX PRK14135
recombination regulator RecX; Provisional
4-266 1.32e-105

recombination regulator RecX; Provisional


Pssm-ID: 237619 [Multi-domain]  Cd Length: 263  Bit Score: 307.14  E-value: 1.32e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505177760   4 ITKLEVQKKNKERFNLYLDNEFEMGIDIDTLVKFNLKKDQILEPSDMEQIQKHDHYRRGLNDAIQFLSYRKRTEKEVRQH 83
Cdd:PRK14135   1 ITKITVQKKNKERYNIFLDEKYAFSVDEDTLVKFMLKKGKELDEEDLEEIQYADQVSKGKNLALYYLSYQMRTEKEVRDY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505177760  84 LLKNEVSEGAIQQVIDYCYQEKLIDHDDYAESLKNTMINTTDKGPEIYKQKLYQAGIEPNIIDQYTEIYLEQQPLEDIVK 163
Cdd:PRK14135  81 LKKHEISEEIISEVIDKLKEEKYIDDKEYAESYVRTNINTGDKGPRVIKQKLLQKGIEDEIIEEALSEYTEEDQIEVAQK 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505177760 164 VANKVIRT-KKGPTSKLKQKVMQSLMQKGYTMERIKEAMDELDFTEDEDQLDYMLQTDLEKVYNKqQRKYEGQQVIRKTI 242
Cdd:PRK14135 161 LAEKLLKKyQKLPFKALKQKIIQSLLTKGFSYEVIKAALEELDLEQDEEEEQELLQKELEKAYRK-YSKYDGYELKQKLK 239
                        250       260
                 ....*....|....*....|....
gi 505177760 243 ETLMRKGYKYDKIKSKLEESGIEH 266
Cdd:PRK14135 240 QALYRKGFSYDDIDSFLREYGIED 263
RecX COG2137
SOS response regulatory protein OraA/RecX, interacts with RecA [Posttranslational modification, ...
55-205 5.75e-33

SOS response regulatory protein OraA/RecX, interacts with RecA [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 441740 [Multi-domain]  Cd Length: 154  Bit Score: 117.97  E-value: 5.75e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505177760  55 KHDHYRRGLNDAIQFLSYRKRTEKEVRQHLLKNEVSEGAIQQVIDYCYQEKLIDHDDYAESLKNTMINTTDKGPEIYKQK 134
Cdd:COG2137    1 KEDTEKKARNRALRLLARRERSRKELRRKLARKGFDEEEIEEVLDRLKEEGYLDDERFAESYVRSRLRRKGYGPRRIRQE 80
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 505177760 135 LYQAGIEPNIIDQYTEIYLEQQPLEDIVKVANKVIRTKKGPTS-KLKQKVMQSLMQKGYTMERIKEAMDELD 205
Cdd:COG2137   81 LRQKGIDEELIEEALEELDEEDELEAARELARKKFGSLKPLDPaKEKQKLARFLARRGFSSDLIRRVLRELL 152
RecX pfam02631
RecX family; RecX is a putative bacterial regulatory protein. The gene encoding RecX is found ...
84-203 3.06e-22

RecX family; RecX is a putative bacterial regulatory protein. The gene encoding RecX is found downstream of recA, and is thought to interact with the RecA protein.


Pssm-ID: 460631 [Multi-domain]  Cd Length: 123  Bit Score: 88.80  E-value: 3.06e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505177760   84 LLKNEVSEGAIQQVIDYCYQEKLIDHDDYAESLKNTMINTTDKGPEIYKQKLYQAGIEPNIIDQYTEiylEQQPLEDI-V 162
Cdd:pfam02631   1 LRKKGFSEEVIEEVLDRLKELGYLDDARFAESFVRSRARTRGKGPRRIRQELRQKGVDEEIIEEALE---EFDEEEQIaR 77
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 505177760  163 KVANK-VIRTKKGPTSKLKQKVMQSLMQKGYTMERIKEAMDE 203
Cdd:pfam02631  78 ELAEKkFKRYPAESDRKLKQKLIRFLARRGFSSEVIRAALQE 119
recX PRK14134
recombination regulator RecX; Provisional
3-261 1.84e-20

recombination regulator RecX; Provisional


Pssm-ID: 184530 [Multi-domain]  Cd Length: 283  Bit Score: 88.32  E-value: 1.84e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505177760   3 KITKLEVQKKNKERFNLYLDNEFEMGIDIDTLVKFNLKKDQILEPSDMEQIQKHDHYRRGLNDAIQFLSYRKRTEKEVRQ 82
Cdd:PRK14134   4 IITKIEVQKRNKDRVNVYIDEEFAFACSAELVYYHNLKKGKVIDVNSLNDIIKEDNYIKCKGYALKYIEKSYKTEKQIKE 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505177760  83 HLLKNEVSEGAIQQVIDYCYQEKLIDHDDYAESLKNTMINTtdKGPEIYKQKLYQAGIEPNIIDQYTEIY---LEQQPLE 159
Cdd:PRK14134  84 KLYLKEYDEDAVNRVIRFLKEYNFIDDDKYCDMYIREKINS--YGRNKIKYTLLNKGIKENIIIEKINNIdeeKEKKVAY 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505177760 160 DIVKVANKVIRTKKGPTSKLKQKVMQSLMQKGYTMERIKEAMDEL----DFTEDEDQLDY---MLQTDLEKVYNKQQRKY 232
Cdd:PRK14134 162 KLAEKKYKILILSEKNKFKIYKKLGPYLISRGYSSNIAEWILNELikneALYKDNNSQNIennIKDENIEELHNLARKRY 241
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 505177760 233 --------EGQQVIRKTIETLMRKGYKYDKIKSKLEE 261
Cdd:PRK14134 242 diiiksedDKNKIYRRLSNYLLRRGYSWEEVKKSLNE 278
recX PRK00117
recombination regulator RecX; Reviewed
63-205 7.65e-17

recombination regulator RecX; Reviewed


Pssm-ID: 234646 [Multi-domain]  Cd Length: 157  Bit Score: 75.69  E-value: 7.65e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505177760  63 LNDAIQFLSYRKRTEKEVRQHLLKNEVSEGAIQQVIDYCYQEKLIDHDDYAESLKNTMINTTdKGPEIYKQKLYQAGIEP 142
Cdd:PRK00117  14 RARALRLLARREHSRAELRRKLAAKGFSEEVIEAVLDRLKEEGLLDDERFAESFVRSRARKG-YGPRRIRQELRQKGVDR 92
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 505177760 143 NIIDQYTEIYlEQQPLEDIVKVANKVIRTKKGPTSKLKQKVMQSLMQKGYTMERIKEAMDELD 205
Cdd:PRK00117  93 EIIEEALAEL-DIDWEELARELARKKFRRPLPDDAKEKAKLVRFLARRGFSMDVIQRVLRNAL 154
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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