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Concise Results
Standard Results
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peptidoglycan glycosyltransferase FtsI [Klebsiella aerogenes]
Protein Classification
List of domain hits
Name
Accession
Description
Interval
E-value
PRK15105 super family
cl33083 peptidoglycan synthase FtsI; Provisional
5-571
0e+00
peptidoglycan synthase FtsI; Provisional
PRK15105 :Pssm-ID: 185060 [Multi-domain]
Cd Length: 578
Bit Score: 872.60
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 5 KSKSAT NF LPI RF G LLC VA IL GC L G FLL A RV G WLQ IVS PD N LV KQE DMRSLR EEPIDVM RG T I S DR E GRPLAVSVPV S AI 84
Cdd:PRK15105 11 RQEEQA NF ISW RF A LLC GC IL LA L V FLL G RV A WLQ VIN PD M LV REG DMRSLR VQEVSTS RG M I T DR S GRPLAVSVPV K AI 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 85 W I DP QTMLEK GG VGYGP RW Q A M A E AL H I D L ID LS H R VQSH P HA RF L YLARQVNP EQ A EW I D KL H LPG VY LR D ESRR F YP A 164
Cdd:PRK15105 91 W A DP KEVHDA GG ISVDD RW K A L A D AL N I P L DQ LS A R INAN P KG RF I YLARQVNP DM A DY I K KL K LPG IH LR E ESRR Y YP S 170
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 165 G H V A A N L L GFTNVD N QGIEGVEKSF N K Q L M G T PG R R L VRKDR H G H VIE N I TEQAAVP AHNL Q LSIDERLQ TVTEDA L D NA 244
Cdd:PRK15105 171 G E V T A H L I GFTNVD S QGIEGVEKSF D K W L T G Q PG E R I VRKDR Y G R VIE D I SSTDSQA AHNL A LSIDERLQ ALVYRE L N NA 250
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 245 V RW NKAESG A AVL IKID TGE I L S MA SY P DF NPNN RDSAQL D DF RNRAI S D T FEPGSTVKP L V I MTALQ Q G I V QPD SV VD T 324
Cdd:PRK15105 251 V AF NKAESG S AVL VDVN TGE V L A MA NS P SY NPNN LSGTPK D AM RNRAI T D V FEPGSTVKP M V V MTALQ R G V V KEN SV LN T 330
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 325 H P FTLD GH R I R DV GY Y P ELTLTG I LQKSS DT GVS H L S LAMP VQH L I DTY KA FG F G DP T G LGL T GE S SGL M P HRRY W GELD 404
Cdd:PRK15105 331 V P YRIN GH E I K DV AR Y S ELTLTG V LQKSS NV GVS K L A LAMP SSA L V DTY SR FG L G KA T N LGL V GE R SGL Y P QKQR W SDIE 410
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 405 RATF A FGYGLMVTPLQLA H VYATIG G YGI E RPLSIT RI DPPV I G T RV M P QE IV HE V E HMMESVALPGGGG T KAA VRD YRI 484
Cdd:PRK15105 411 RATF S FGYGLMVTPLQLA R VYATIG S YGI Y RPLSIT KV DPPV P G E RV F P ES IV RT V V HMMESVALPGGGG V KAA IKG YRI 490
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 485 A V KTGTAKK I GPDG K YI D KY V AYTAGVAPASQP K FALVVVINDP SN GKYYGGAVSAPVF SQ IMG D VLR LE N VM PD GM P Q G 564
Cdd:PRK15105 491 A I KTGTAKK V GPDG R YI N KY I AYTAGVAPASQP R FALVVVINDP QA GKYYGGAVSAPVF GA IMG G VLR TM N IE PD AL P T G 570
....*..
gi 505178932 565 SE N LI V M 571
Cdd:PRK15105 571 DK N EF V I 577
Name
Accession
Description
Interval
E-value
PRK15105
PRK15105 peptidoglycan synthase FtsI; Provisional
5-571
0e+00
peptidoglycan synthase FtsI; Provisional
Pssm-ID: 185060 [Multi-domain]
Cd Length: 578
Bit Score: 872.60
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 5 KSKSAT NF LPI RF G LLC VA IL GC L G FLL A RV G WLQ IVS PD N LV KQE DMRSLR EEPIDVM RG T I S DR E GRPLAVSVPV S AI 84
Cdd:PRK15105 11 RQEEQA NF ISW RF A LLC GC IL LA L V FLL G RV A WLQ VIN PD M LV REG DMRSLR VQEVSTS RG M I T DR S GRPLAVSVPV K AI 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 85 W I DP QTMLEK GG VGYGP RW Q A M A E AL H I D L ID LS H R VQSH P HA RF L YLARQVNP EQ A EW I D KL H LPG VY LR D ESRR F YP A 164
Cdd:PRK15105 91 W A DP KEVHDA GG ISVDD RW K A L A D AL N I P L DQ LS A R INAN P KG RF I YLARQVNP DM A DY I K KL K LPG IH LR E ESRR Y YP S 170
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 165 G H V A A N L L GFTNVD N QGIEGVEKSF N K Q L M G T PG R R L VRKDR H G H VIE N I TEQAAVP AHNL Q LSIDERLQ TVTEDA L D NA 244
Cdd:PRK15105 171 G E V T A H L I GFTNVD S QGIEGVEKSF D K W L T G Q PG E R I VRKDR Y G R VIE D I SSTDSQA AHNL A LSIDERLQ ALVYRE L N NA 250
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 245 V RW NKAESG A AVL IKID TGE I L S MA SY P DF NPNN RDSAQL D DF RNRAI S D T FEPGSTVKP L V I MTALQ Q G I V QPD SV VD T 324
Cdd:PRK15105 251 V AF NKAESG S AVL VDVN TGE V L A MA NS P SY NPNN LSGTPK D AM RNRAI T D V FEPGSTVKP M V V MTALQ R G V V KEN SV LN T 330
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 325 H P FTLD GH R I R DV GY Y P ELTLTG I LQKSS DT GVS H L S LAMP VQH L I DTY KA FG F G DP T G LGL T GE S SGL M P HRRY W GELD 404
Cdd:PRK15105 331 V P YRIN GH E I K DV AR Y S ELTLTG V LQKSS NV GVS K L A LAMP SSA L V DTY SR FG L G KA T N LGL V GE R SGL Y P QKQR W SDIE 410
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 405 RATF A FGYGLMVTPLQLA H VYATIG G YGI E RPLSIT RI DPPV I G T RV M P QE IV HE V E HMMESVALPGGGG T KAA VRD YRI 484
Cdd:PRK15105 411 RATF S FGYGLMVTPLQLA R VYATIG S YGI Y RPLSIT KV DPPV P G E RV F P ES IV RT V V HMMESVALPGGGG V KAA IKG YRI 490
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 485 A V KTGTAKK I GPDG K YI D KY V AYTAGVAPASQP K FALVVVINDP SN GKYYGGAVSAPVF SQ IMG D VLR LE N VM PD GM P Q G 564
Cdd:PRK15105 491 A I KTGTAKK V GPDG R YI N KY I AYTAGVAPASQP R FALVVVINDP QA GKYYGGAVSAPVF GA IMG G VLR TM N IE PD AL P T G 570
....*..
gi 505178932 565 SE N LI V M 571
Cdd:PRK15105 571 DK N EF V I 577
FtsI
COG0768 Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell ...
5-555
0e+00
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440531 [Multi-domain]
Cd Length: 568
Bit Score: 599.50
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 5 K S K SATNFLPI R FG LL CVAI L GCLGF L LA R VGW LQ I V SP D NLVKQEDMRSL R EE PI DVM RG T I S DR E G RP LA VS VPV SAI 84
Cdd:COG0768 2 K R K KEKRLFRR R LL LL FLLV L LLFLL L VG R LFY LQ V V EG D EYAELAEENRI R TV PI PAP RG L I Y DR N G NV LA TN VPV YSL 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 85 WI DP QTMLEKGGV gygpr WQAM A EA L HI D LID L SHRVQSH p HARFL YL A R QVN PE Q A EW I DK L H LPGVY LRD E SR R F YP A 164
Cdd:COG0768 82 YA DP EEVKDPEET ----- AEKL A KL L GL D PEE L RKKLKKK - SRFPV YL K R NLS PE E A AR I RA L K LPGVY VEA E YK R Y YP Y 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 165 G HV AA NL LG FTNV ---- D NQ G IE G V EK SFNKQ L M GTPG R R L V RK D RH G H VI ENI - T E QAA VP AHN L Q L S ID ER LQ TVT E D 239
Cdd:COG0768 156 G EL AA HV LG YVGE ingg D GI G KS G L EK AYEDL L R GTPG K R R V EV D AR G R VI RDL g E E KPP VP GKD L V L T ID SD LQ KIA E E 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 240 AL DN AV RWN KA E SGA A V LIKID TGEIL S MASYP D F N PN NRDSAQLDDF RNRA ISD T F EPGST V KP LVIMT AL QQ G IVQ PD 319
Cdd:COG0768 236 AL KK AV EEY KA K SGA V V VMDPK TGEIL A MASYP S F D PN LFVGGPDEPL RNRA VQG T Y EPGST F KP FTAAA AL EE G VIT PD 315
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 320 SVV - DTHPFTLD G HR IRD -- V G YYPE LTLT GI L Q KSS DT G VSH L S L AMPVQH L I D TY K A FG F G DP TG LG L T GE S SGL M P H 396
Cdd:COG0768 316 TTF d CPGYYRVG G RT IRD wd R G GHGT LTLT EA L A KSS NV G FYK L A L RLGIDK L Y D YL K K FG L G QK TG ID L P GE A SGL L P S 395
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 397 RRY W GELDR AT FAF G Y GL M VTPLQLA HV YA T I -- GG Y -------- G I ER P LSITRIDP P VIGT RV MPQ E IVHE V EHM ME S 466
Cdd:COG0768 396 PKR W YPGET AT MSI G Q GL S VTPLQLA QA YA A I an GG V lvkphlvk E I VD P DGEVVKEE P EVLR RV ISP E TAET V REG ME G 475
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 467 V AL - PGG GGTK AA VRD YR I A V KTGTA KKIGPD -- G K Y IDKYV A YTA G V APA SQ P KF A LV VV IND P s N G KY YGG A V S APVF 543
Cdd:COG0768 476 V VN e PGG TARR AA IPG YR V A G KTGTA QVVDIG ng G Y Y KGRHI A SFV G F APA DN P RY A VA VV VEN P - G G GA YGG T V A APVF 554
570
....*....|..
gi 505178932 544 SQ IM GDV LRL EN 555
Cdd:COG0768 555 RE IM EAY LRL LG 566
pbp2_mrdA
TIGR03423 penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ...
16-547
5.26e-99
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain]
Cd Length: 592
Bit Score: 312.53
E-value: 5.26e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 16 R FGL L CVAI L GCL G F L L AR VGW LQ IVSPDNLVKQEDMRSL R EE PI DVM RG T I S DR E G RP LA VSV P VSAIW I D P Q tmlekg 95
Cdd:TIGR03423 2 R ALV L GGLV L ALF G V L A AR LFY LQ VIRGEEYATLSEDNRI R LV PI PPP RG L I L DR N G VL LA DNR P SFSLE I V P E ------ 75
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 96 gvg YGPRWQ A MAEA L h ID L I DL S -------- HRVQSHPHARFLY L ARQVNP E QAEWI -- DKLH LPGV YLRDESR R F YP A G 165
Cdd:TIGR03423 76 --- KVDDLD A TLDR L - AK L L DL D pediarfl KELKRSRRFEPIP L KSDLTE E EVARF av NQYR LPGV EIEARLK R Y YP Y G 151
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 166 HV AA NL LG FTNVD N Q ----------------- G IE G V EK SFNKQ L M G T PG R R L V RKDRH G H VI ENITEQAA VP AHN L Q L S 228
Cdd:TIGR03423 152 EL AA HV LG YVGEI N E edlerlepanyaggdyi G KS G I EK YYEDE L R G K PG Y R E V EVNAR G R VI RTLSRVPP VP GKD L V L T 231
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 229 ID E RLQ TVT E D AL DN avrwnka ES GA A V LIKID TGEIL S M A S Y P D F N PN ------- NR D SAQ L DD ----- FR NRAI SDTF 296
Cdd:TIGR03423 232 ID A RLQ QAA E K AL GG ------- RR GA V V VMDPR TGEIL A M V S T P S F D PN lfvdgis SK D YKA L LN dpdrp LL NRAI QGVY 304
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 297 E PGST V KP L V IMT AL QQ G IVQ P D - SVVDTHP F T L D G H R I R D ----- V G Y ype LT L TGILQK S S D TGVSH L S L AMPVQHLI 370
Cdd:TIGR03423 305 P PGST F KP V V ALA AL EE G VIT P E t RIYCPGY F Q L G G R R F R C wkrgg H G R --- VD L RKAIEE S C D VYFYQ L A L RLGIDKIA 381
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 371 DTY K A FGFG DP TG LG L T GE S SGL M P ---- H R RYW G EL ---- D RATFAF G Y G LM - VTPLQLA HVY A TI -- GG Y -------- 431
Cdd:TIGR03423 382 EYA K R FGFG QK TG ID L P GE K SGL V P srew K R KRF G QP wypg D TLNVSI G Q G YV l VTPLQLA VAT A AL an GG K lykphlvk 461
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 432 G IE R P LS -- IT R ID P P V IGTRVMPQ E IVHE V EHM M ES V AL p G G GGT KAAV R --- D Y RI A V KTGTA -- KKIGPDG KY IDKY 504
Cdd:TIGR03423 462 S IE D P DG gv VR R TE P E V LRPLPISP E NLDV V REG M RD V VN - G P GGT ARRA R lgl P Y KM A G KTGTA qv VSLKQGE KY DAEQ 540
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|
gi 505178932 505 VAYT ------- AGV AP ASQ PK F A LV V VI ndp SN G K y Y G GAVS AP VFSQ IM 547
Cdd:TIGR03423 541 IPER lrdhalf VAF AP YDN PK I A VA V IV --- EH G G - G G SSAA AP IARK IM 586
Transpeptidase
pfam00905 Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss: ...
253-547
2.48e-86
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family.
Pssm-ID: 425939 [Multi-domain]
Cd Length: 296
Bit Score: 270.06
E-value: 2.48e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 253 G A AV LIKID TGE I L S M ASY P DFN PN NRD saql DDF RNRA ISDTF EPGST V KP LVIMT AL QQ G IVQ PD SVVDTH P FTL - D G 331
Cdd:pfam00905 1 G S AV VLDPK TGE V L A M VGK P SYD PN GFI ---- GPL RNRA VTSRY EPGST F KP FTALA AL DN G VLK PD ETIFDW P GKQ q G G 76
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 332 HR I R D -- VGYYPEL TL TGI L QK SS DTGVSH L SLAMPVQH L IDTY K A FG F G DP TG L GL T GE SS G LMPH rr YW ge L DR AT FA 409
Cdd:pfam00905 77 KS I G D wn QDQVGIG TL RQA L EY SS NWYMQK L AQKLGADK L RSYL K K FG Y G NK TG I GL P GE NA G YLTP -- YW -- L EG AT AS 152
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 410 FG Y GL MV TPLQ L A HV YA T I GGY G IER P LSIT ----- RI DP P V IGTRVMPQEIVHE V EH M MES V ALP G G G GTK AAV RD Y RI 484
Cdd:pfam00905 153 FG I GL TI TPLQ Q A QA YA A I ANG G KLV P PHLV ksied KV DP K V LNKLPISKSTAEK V KD M LRL V VND G T G TGT AAV PG Y KV 232
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 505178932 485 A V KTGTA KKI GP D -- G K Y IDKYVAYTA G V APA SQ PK F A LV V V I N DP sn GK YYGG A V S AP V F SQ I M 547
Cdd:pfam00905 233 A G KTGTA QVA GP K gg G Y Y DGAQIGWFV G Y APA DN PK Y A FA V L I D DP -- KR YYGG K V A AP I F KD I L 295
Name
Accession
Description
Interval
E-value
PRK15105
PRK15105 peptidoglycan synthase FtsI; Provisional
5-571
0e+00
peptidoglycan synthase FtsI; Provisional
Pssm-ID: 185060 [Multi-domain]
Cd Length: 578
Bit Score: 872.60
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 5 KSKSAT NF LPI RF G LLC VA IL GC L G FLL A RV G WLQ IVS PD N LV KQE DMRSLR EEPIDVM RG T I S DR E GRPLAVSVPV S AI 84
Cdd:PRK15105 11 RQEEQA NF ISW RF A LLC GC IL LA L V FLL G RV A WLQ VIN PD M LV REG DMRSLR VQEVSTS RG M I T DR S GRPLAVSVPV K AI 90
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 85 W I DP QTMLEK GG VGYGP RW Q A M A E AL H I D L ID LS H R VQSH P HA RF L YLARQVNP EQ A EW I D KL H LPG VY LR D ESRR F YP A 164
Cdd:PRK15105 91 W A DP KEVHDA GG ISVDD RW K A L A D AL N I P L DQ LS A R INAN P KG RF I YLARQVNP DM A DY I K KL K LPG IH LR E ESRR Y YP S 170
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 165 G H V A A N L L GFTNVD N QGIEGVEKSF N K Q L M G T PG R R L VRKDR H G H VIE N I TEQAAVP AHNL Q LSIDERLQ TVTEDA L D NA 244
Cdd:PRK15105 171 G E V T A H L I GFTNVD S QGIEGVEKSF D K W L T G Q PG E R I VRKDR Y G R VIE D I SSTDSQA AHNL A LSIDERLQ ALVYRE L N NA 250
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 245 V RW NKAESG A AVL IKID TGE I L S MA SY P DF NPNN RDSAQL D DF RNRAI S D T FEPGSTVKP L V I MTALQ Q G I V QPD SV VD T 324
Cdd:PRK15105 251 V AF NKAESG S AVL VDVN TGE V L A MA NS P SY NPNN LSGTPK D AM RNRAI T D V FEPGSTVKP M V V MTALQ R G V V KEN SV LN T 330
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 325 H P FTLD GH R I R DV GY Y P ELTLTG I LQKSS DT GVS H L S LAMP VQH L I DTY KA FG F G DP T G LGL T GE S SGL M P HRRY W GELD 404
Cdd:PRK15105 331 V P YRIN GH E I K DV AR Y S ELTLTG V LQKSS NV GVS K L A LAMP SSA L V DTY SR FG L G KA T N LGL V GE R SGL Y P QKQR W SDIE 410
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 405 RATF A FGYGLMVTPLQLA H VYATIG G YGI E RPLSIT RI DPPV I G T RV M P QE IV HE V E HMMESVALPGGGG T KAA VRD YRI 484
Cdd:PRK15105 411 RATF S FGYGLMVTPLQLA R VYATIG S YGI Y RPLSIT KV DPPV P G E RV F P ES IV RT V V HMMESVALPGGGG V KAA IKG YRI 490
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 485 A V KTGTAKK I GPDG K YI D KY V AYTAGVAPASQP K FALVVVINDP SN GKYYGGAVSAPVF SQ IMG D VLR LE N VM PD GM P Q G 564
Cdd:PRK15105 491 A I KTGTAKK V GPDG R YI N KY I AYTAGVAPASQP R FALVVVINDP QA GKYYGGAVSAPVF GA IMG G VLR TM N IE PD AL P T G 570
....*..
gi 505178932 565 SE N LI V M 571
Cdd:PRK15105 571 DK N EF V I 577
FtsI
COG0768 Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell ...
5-555
0e+00
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440531 [Multi-domain]
Cd Length: 568
Bit Score: 599.50
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 5 K S K SATNFLPI R FG LL CVAI L GCLGF L LA R VGW LQ I V SP D NLVKQEDMRSL R EE PI DVM RG T I S DR E G RP LA VS VPV SAI 84
Cdd:COG0768 2 K R K KEKRLFRR R LL LL FLLV L LLFLL L VG R LFY LQ V V EG D EYAELAEENRI R TV PI PAP RG L I Y DR N G NV LA TN VPV YSL 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 85 WI DP QTMLEKGGV gygpr WQAM A EA L HI D LID L SHRVQSH p HARFL YL A R QVN PE Q A EW I DK L H LPGVY LRD E SR R F YP A 164
Cdd:COG0768 82 YA DP EEVKDPEET ----- AEKL A KL L GL D PEE L RKKLKKK - SRFPV YL K R NLS PE E A AR I RA L K LPGVY VEA E YK R Y YP Y 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 165 G HV AA NL LG FTNV ---- D NQ G IE G V EK SFNKQ L M GTPG R R L V RK D RH G H VI ENI - T E QAA VP AHN L Q L S ID ER LQ TVT E D 239
Cdd:COG0768 156 G EL AA HV LG YVGE ingg D GI G KS G L EK AYEDL L R GTPG K R R V EV D AR G R VI RDL g E E KPP VP GKD L V L T ID SD LQ KIA E E 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 240 AL DN AV RWN KA E SGA A V LIKID TGEIL S MASYP D F N PN NRDSAQLDDF RNRA ISD T F EPGST V KP LVIMT AL QQ G IVQ PD 319
Cdd:COG0768 236 AL KK AV EEY KA K SGA V V VMDPK TGEIL A MASYP S F D PN LFVGGPDEPL RNRA VQG T Y EPGST F KP FTAAA AL EE G VIT PD 315
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 320 SVV - DTHPFTLD G HR IRD -- V G YYPE LTLT GI L Q KSS DT G VSH L S L AMPVQH L I D TY K A FG F G DP TG LG L T GE S SGL M P H 396
Cdd:COG0768 316 TTF d CPGYYRVG G RT IRD wd R G GHGT LTLT EA L A KSS NV G FYK L A L RLGIDK L Y D YL K K FG L G QK TG ID L P GE A SGL L P S 395
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 397 RRY W GELDR AT FAF G Y GL M VTPLQLA HV YA T I -- GG Y -------- G I ER P LSITRIDP P VIGT RV MPQ E IVHE V EHM ME S 466
Cdd:COG0768 396 PKR W YPGET AT MSI G Q GL S VTPLQLA QA YA A I an GG V lvkphlvk E I VD P DGEVVKEE P EVLR RV ISP E TAET V REG ME G 475
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 467 V AL - PGG GGTK AA VRD YR I A V KTGTA KKIGPD -- G K Y IDKYV A YTA G V APA SQ P KF A LV VV IND P s N G KY YGG A V S APVF 543
Cdd:COG0768 476 V VN e PGG TARR AA IPG YR V A G KTGTA QVVDIG ng G Y Y KGRHI A SFV G F APA DN P RY A VA VV VEN P - G G GA YGG T V A APVF 554
570
....*....|..
gi 505178932 544 SQ IM GDV LRL EN 555
Cdd:COG0768 555 RE IM EAY LRL LG 566
pbp2_mrdA
TIGR03423 penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ...
16-547
5.26e-99
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain]
Cd Length: 592
Bit Score: 312.53
E-value: 5.26e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 16 R FGL L CVAI L GCL G F L L AR VGW LQ IVSPDNLVKQEDMRSL R EE PI DVM RG T I S DR E G RP LA VSV P VSAIW I D P Q tmlekg 95
Cdd:TIGR03423 2 R ALV L GGLV L ALF G V L A AR LFY LQ VIRGEEYATLSEDNRI R LV PI PPP RG L I L DR N G VL LA DNR P SFSLE I V P E ------ 75
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 96 gvg YGPRWQ A MAEA L h ID L I DL S -------- HRVQSHPHARFLY L ARQVNP E QAEWI -- DKLH LPGV YLRDESR R F YP A G 165
Cdd:TIGR03423 76 --- KVDDLD A TLDR L - AK L L DL D pediarfl KELKRSRRFEPIP L KSDLTE E EVARF av NQYR LPGV EIEARLK R Y YP Y G 151
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 166 HV AA NL LG FTNVD N Q ----------------- G IE G V EK SFNKQ L M G T PG R R L V RKDRH G H VI ENITEQAA VP AHN L Q L S 228
Cdd:TIGR03423 152 EL AA HV LG YVGEI N E edlerlepanyaggdyi G KS G I EK YYEDE L R G K PG Y R E V EVNAR G R VI RTLSRVPP VP GKD L V L T 231
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 229 ID E RLQ TVT E D AL DN avrwnka ES GA A V LIKID TGEIL S M A S Y P D F N PN ------- NR D SAQ L DD ----- FR NRAI SDTF 296
Cdd:TIGR03423 232 ID A RLQ QAA E K AL GG ------- RR GA V V VMDPR TGEIL A M V S T P S F D PN lfvdgis SK D YKA L LN dpdrp LL NRAI QGVY 304
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 297 E PGST V KP L V IMT AL QQ G IVQ P D - SVVDTHP F T L D G H R I R D ----- V G Y ype LT L TGILQK S S D TGVSH L S L AMPVQHLI 370
Cdd:TIGR03423 305 P PGST F KP V V ALA AL EE G VIT P E t RIYCPGY F Q L G G R R F R C wkrgg H G R --- VD L RKAIEE S C D VYFYQ L A L RLGIDKIA 381
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 371 DTY K A FGFG DP TG LG L T GE S SGL M P ---- H R RYW G EL ---- D RATFAF G Y G LM - VTPLQLA HVY A TI -- GG Y -------- 431
Cdd:TIGR03423 382 EYA K R FGFG QK TG ID L P GE K SGL V P srew K R KRF G QP wypg D TLNVSI G Q G YV l VTPLQLA VAT A AL an GG K lykphlvk 461
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 432 G IE R P LS -- IT R ID P P V IGTRVMPQ E IVHE V EHM M ES V AL p G G GGT KAAV R --- D Y RI A V KTGTA -- KKIGPDG KY IDKY 504
Cdd:TIGR03423 462 S IE D P DG gv VR R TE P E V LRPLPISP E NLDV V REG M RD V VN - G P GGT ARRA R lgl P Y KM A G KTGTA qv VSLKQGE KY DAEQ 540
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|
gi 505178932 505 VAYT ------- AGV AP ASQ PK F A LV V VI ndp SN G K y Y G GAVS AP VFSQ IM 547
Cdd:TIGR03423 541 IPER lrdhalf VAF AP YDN PK I A VA V IV --- EH G G - G G SSAA AP IARK IM 586
Transpeptidase
pfam00905 Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss: ...
253-547
2.48e-86
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family.
Pssm-ID: 425939 [Multi-domain]
Cd Length: 296
Bit Score: 270.06
E-value: 2.48e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 253 G A AV LIKID TGE I L S M ASY P DFN PN NRD saql DDF RNRA ISDTF EPGST V KP LVIMT AL QQ G IVQ PD SVVDTH P FTL - D G 331
Cdd:pfam00905 1 G S AV VLDPK TGE V L A M VGK P SYD PN GFI ---- GPL RNRA VTSRY EPGST F KP FTALA AL DN G VLK PD ETIFDW P GKQ q G G 76
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 332 HR I R D -- VGYYPEL TL TGI L QK SS DTGVSH L SLAMPVQH L IDTY K A FG F G DP TG L GL T GE SS G LMPH rr YW ge L DR AT FA 409
Cdd:pfam00905 77 KS I G D wn QDQVGIG TL RQA L EY SS NWYMQK L AQKLGADK L RSYL K K FG Y G NK TG I GL P GE NA G YLTP -- YW -- L EG AT AS 152
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 410 FG Y GL MV TPLQ L A HV YA T I GGY G IER P LSIT ----- RI DP P V IGTRVMPQEIVHE V EH M MES V ALP G G G GTK AAV RD Y RI 484
Cdd:pfam00905 153 FG I GL TI TPLQ Q A QA YA A I ANG G KLV P PHLV ksied KV DP K V LNKLPISKSTAEK V KD M LRL V VND G T G TGT AAV PG Y KV 232
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 505178932 485 A V KTGTA KKI GP D -- G K Y IDKYVAYTA G V APA SQ PK F A LV V V I N DP sn GK YYGG A V S AP V F SQ I M 547
Cdd:pfam00905 233 A G KTGTA QVA GP K gg G Y Y DGAQIGWFV G Y APA DN PK Y A FA V L I D DP -- KR YYGG K V A AP I F KD I L 295
PRK10795
PRK10795 penicillin-binding protein 2; Provisional
8-567
1.46e-36
penicillin-binding protein 2; Provisional
Pssm-ID: 236761 [Multi-domain]
Cd Length: 634
Bit Score: 144.53
E-value: 1.46e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 8 S A TNF L PI R FG L lc VA I LG C L --- G F L L A RVGW LQIV SPDNLVKQEDMRSLREE PI DVM RG T I S DR E G R PLA VSVPVSAI 84
Cdd:PRK10795 12 T A ESA L FV R RA L -- VA F LG I L llt G V L I A NLYN LQIV RFTDYQTRSNENRIKLV PI APS RG I I Y DR N G T PLA LNRTIYQL 89
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 85 WID P QTM lekggvgyg PRW Q AMAE AL H i DLI DL S --------- H R VQ S H pha RF LYLARQV N PEQAE ---- WIDKLHL PG 151
Cdd:PRK10795 90 EMM P EKV --------- DNL Q QTLD AL R - SVV DL T dddiaafrk E R AR S R --- RF TSIPVKT N LTEVQ varf AVNQYRF PG 156
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 152 V YLRDES RR F YP A G HVAANLL G FTN --------- V D NQ G IE ------------ G V E KSFNKQ L M G TP G RRL V RKDRH G H V 210
Cdd:PRK10795 157 V EVKGYQ RR Y YP Y G SALTHVI G YVS kindkdver L D KE G KL anyaathdigkl G I E RYYEDV L H G KT G YEE V EVNNR G R V 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 211 I ENIT EQ AAVPA H NLQ L SI D ER LQ TVT E DA L dnavrwnk A E S G AAV LI k I D -- TG E IL SMA S Y P DFN PN ------- NR D S 281
Cdd:PRK10795 237 I RQLH EQ PPQAG H DIY L TL D LK LQ QYI E TL L -------- A G S R AAV VV - T D pr TG G IL ALV S T P SYD PN lfvdgis SK D Y 307
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 282 AQ L -- D DF R --- NRA ISDTFE P G STVKP L V IMT AL QQ G IVQPD - S VV D THPFT L D G -- H R I RD VGYYP -- E L TL T GI L QK 351
Cdd:PRK10795 308 SG L ln D PN R pli NRA TQGVYP P A STVKP Y V AVS AL SA G VITRN t S LF D PGWWQ L P G se K R Y RD WKKWG hg R L NV T KS L EE 387
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 352 S S DT GVSHLSLA M PVQH L IDTYKA FG F G DP TG LG L TG E S SG L MP H R ----- R Y --- W GEL D RATFAF G Y G L - MV TP L Q LA 422
Cdd:PRK10795 388 S A DT FFYQVAYD M GIDR L SEWMGK FG Y G HY TG ID L AE E R SG N MP T R ewkqk R F kkp W YQG D TIPVGI G Q G Y w TA TP I Q MS 467
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 423 HVYA T IGGY G - IER P -- L SI T RI D PPVIGTRVMPQEI V HEV -------- EHM M ES VA - L P G G GGT K A - A VRD Y R IA V K T G 489
Cdd:PRK10795 468 KALM T LIND G i VKV P hl L MS T AE D GKQVPWVQPHEPP V GDI hsgyweia KDG M YG VA n R P N G TAH K Y f A SAP Y K IA A K S G 547
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 490 TA KKI G P dg K YIDK Y V A YT ----------- AGV AP ASQ P KF A LVVVIND psngkyy GGA VS A -- PVFS QI MGDVLRLE N - 555
Cdd:PRK10795 548 TA QVF G L -- K ANET Y N A HK iaerlrdhklm TAF AP YNN P QV A VAIILEN ------- GGA GP A vg TIMR QI LDHIMLGD N n 618
650
....*....|....*
gi 505178932 556 - VM P DGM P Q -- GS E N 567
Cdd:PRK10795 619 t DL P AEN P A va AA E D 633
MrcB
COG0744 Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall ...
228-564
1.44e-35
Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440507 [Multi-domain]
Cd Length: 630
Bit Score: 141.60
E-value: 1.44e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 228 SI D ER LQ TVT E D A LD N AVRWN K AES -- G A A V LIKID TGE I L S M ASYP D FNPNNR dsaqlddfr NRA ISDTFE PGST V KP L 305
Cdd:COG0744 300 TL D PK LQ KAA E K A VK N VLPEG K PGG lq A A L V VVDPK TGE V L A M VGGR D YGKSQF --------- NRA TQAKRQ PGST F KP F 370
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 306 V IMT AL Q QG I v Q P DSV VD TH P F T LD G -- HRIR -- D VG Y YPEL TL TGI L QK S SD T GVSH L SLAMPVQHLI DT YKAF G FGD P 381
Cdd:COG0744 371 V YAA AL E QG Y - T P ATT VD DE P V T FP G gg WSPK ny D GR Y RGPV TL REA L AN S LN T PAVR L AQEVGLDKVV DT ARRL G ITS P 449
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 382 TGLGL tgessglmphrrywgeldra TF A F G - YG lm V T PL QL A HV YAT I -- GG YGI E r P LS IT RI --------- DPPVIGT 449
Cdd:COG0744 450 LDPNP -------------------- SL A L G t SE -- V S PL EM A SA YAT F an GG VYV E - P HA IT KV tdadgkvly EAKPKCE 506
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 450 R V MPQ E IVHEVEH M MES V a LPG G G G TK A AVRDYRI A V KTGT AK kigpdg KYI D K - Y V A YT agvapasq P KFALV V VINDP 528
Cdd:COG0744 507 Q V ISP E VAYLMTD M LQD V - VTS G T G RA A RLPGRPV A G KTGT TN ------ DNR D A w F V G YT -------- P QLVTA V WVGND 571
330 340 350
....*....|....*....|....*....|....*....
gi 505178932 529 S N --- G KYY GG AVS AP VFSQI M GDV L RLEN V MPDGM P Q G 564
Cdd:COG0744 572 D N spm G YVT GG SLP AP IWRDF M EAA L EGLP V EDFPK P S G 610
PBP_dimer
pfam03717 Penicillin-binding Protein dimerization domain; This domain is found at the N terminus of ...
59-213
7.87e-21
Penicillin-binding Protein dimerization domain; This domain is found at the N terminus of Class B High Molecular Weight Penicillin-Binding Proteins. Its function has not been precisely defined, but is strongly implicated in PBP polymerization. The domain forms a largely disordered 'sugar tongs' structure.
Pssm-ID: 427460 [Multi-domain]
Cd Length: 178
Bit Score: 90.07
E-value: 7.87e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 59 PI DVM RG T I S DR E G RP LA VSV PV SAIW I D P QTMLEK ggvgygp RWQAM A EA L ----------- HI DL IDLSHRVQ S HPHA 127
Cdd:pfam03717 1 PI PAP RG E I Y DR N G VV LA TNK PV YSLT I T P SKLKKA ------- DALKT A LK L akllsnyedld DE DL TERFLKMN S YKSY 73
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 128 RFLYLARQVNP E QAEW I DKLH -- LPGV YLRDESR R F YP A G HV AA N LLG FTNVDNQ ----------------- G IE G V EK S 188
Cdd:pfam03717 74 YPVVIKKNLSE E EVAR I EENL le LPGV SIETDPV R Y YP Y G EL AA H LLG YVGEITE eelekyldkgysrgdlv G KS G L EK Q 153
170 180
....*....|....*....|....*
gi 505178932 189 FNKQ L M G TP G R R L V RK D RH G H VI EN 213
Cdd:pfam03717 154 YESV L R G KD G V R Q V EV D AL G R VI RE 178
PbpC
COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope ...
199-511
1.63e-17
Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443980 [Multi-domain]
Cd Length: 773
Bit Score: 86.42
E-value: 1.63e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 199 RRL V R KDRH G HV I eniteqaavpahnl QLSI D ER LQ TVT E DALDNA VR --- W N KAESG A AVLIKID TGE I L SMASYP DF N 275
Cdd:COG4953 262 RRL L R QLPG G TR I -------------- RTTL D AG LQ RRL E RLVRRY VR rlk Q N GIHNA A VLVVDNR TGE V L AYVGSA DF F 327
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 276 p NNRDSA Q L D DF R - N R A isdtfe PGST V KP LVIMT AL Q QG IVQ P DSVVDTH P FTLD G H R IR -- D VGYYPELTLTGI L Q ks 352
Cdd:COG4953 328 - DASRQG Q V D MV R a L R S ------ PGST L KP FLYGL AL D QG LIH P ETLLADV P TSFG G Y R PE nf D GTFQGPVSAREA L A -- 398
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 353 sdtgvsh L SL AM P VQH L IDTY --------- KAF G FGDPT ------ GL G L tgessglmphrrywgeldratf AF G y G LM VT 417
Cdd:COG4953 399 ------- R SL NI P AVR L LEAL gparfyarl RRA G LRLLL ppaehy GL S L ---------------------- IL G - G AE VT 448
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505178932 418 PLQ L AHV YA TIGGY G IE RPL SITRID P PVI G T R VMPQE --- I V HE veh MMES V AL P G G - G G TK A AVRDYR IA V KTGT --- 490
Cdd:COG4953 449 LEE L VGL YA ALARG G EA RPL RLLAGE P ASP G R R LLSPG aaw L V RD --- ILSD V PR P D G a F G WR A LDSPPP IA W KTGT syg 525
330 340
....*....|....*....|....
gi 505178932 491 --- A KKI G PD G K yidkyva YT A GV 511
Cdd:COG4953 526 frd A WAV G FT G R ------- YT V GV 542
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
