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Conserved domains on  [gi|505180181|ref|WP_015367283|]
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flagellar filament capping protein FliD [Klebsiella aerogenes]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
fliD super family cl35636
flagellar capping protein; Reviewed
 1-465 5.09e-176

flagellar capping protein; Reviewed


The actual alignment was detected with superfamily member PRK08032:

Pssm-ID: 236141 [Multi-domain]  Cd Length: 462  Bit Score: 501.53  E-value: 5.09e-176
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181   1 MASISSLGIGSGLDLNGLLDKLSKAEQQRLTPYTTQQTSYNAQLTAYGTLKSSLEKFDNLSKELAKPEFFNSTTAT-KHD 79
Cdd:PRK08032   1 MASISSLGVGSGLDLDSLLDSLTAAEKKRLTPITNQQSSYTAKLTAYGTLKSALEKFQTANTALNKADLFSSTKVSsSTT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181  80 QFTITTTNKAVPGNYSVEVQKLAQPQTLTTqATITDQQEKLGTAgNSDRSITITAGDPPKETTIPLSDDQTSLLEMRDAI 159
Cdd:PRK08032  81 AFSATTDSGASAGKYTISVTQLAQAQSLTT-ATVSSTKEALGTS-DSTRTITITQPGRKEPLEIDLTAGQTSLSGIRDAI 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 160 NGAKAGVTASIMRVGDNDYQLALSSSTTGEKNTVSVQVNNDDKLGAILNYDSSSNSGAMKQTVAGQDAEIVVNGTKIKRS 239
Cdd:PRK08032 159 NKAEGGVSASIIKVGDGEYRLVLTSKDTGTDNAMTISVEGDSKLNDFLNYDSSTGSGNMTQSVAAQNAKLTVNGIAIERQ 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 240 TNSIADALQGVTIDLKTTTKAGepQNLVIGIDKSGTADKIKEWVDNYNSLLDTFGSLTKYTPVKSGEAQSAKNGALLGDN 319
Cdd:PRK08032 239 SNTITDAPEGITLNLKKVTTGN--QTLTITKDTTKAKEAIKDWVDAYNSLQDTFSSLTKYTAVDAGADQSSSNGALLGDS 316

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 320 TLRGIQSSIKSALSAAQDNPELKGLGNLGISTNPKTGKLEVDSTKLNKALDEKPDQVANFFAGNGKDTGMATEIHNEIQN 399
Cdd:PRK08032 317 TLRTIQTQLKSQLANSQSSSDFKTLAQIGITQDPSDGKLEIDDDKLTKALKEDPAGVKALFVGDGKKTGITTQIATNLKS 396

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 505180181 400 YIKAGGIIENSTKSINTNLDRLNVQIDTVSDSIQNTIDRYKQQFVQLDTMMSKLSSTGNYLQQQFS 465
Cdd:PRK08032 397 WLSTTGIIKTATDGVNKTLKKLTKQYNAVSDSIDATIARYKAQFTQLDKLMTSLNSTSSYLTQQFE 462
 
Name Accession Description Interval E-value
fliD PRK08032
flagellar capping protein; Reviewed
 1-465 5.09e-176

flagellar capping protein; Reviewed


Pssm-ID: 236141 [Multi-domain]  Cd Length: 462  Bit Score: 501.53  E-value: 5.09e-176
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181   1 MASISSLGIGSGLDLNGLLDKLSKAEQQRLTPYTTQQTSYNAQLTAYGTLKSSLEKFDNLSKELAKPEFFNSTTAT-KHD 79
Cdd:PRK08032   1 MASISSLGVGSGLDLDSLLDSLTAAEKKRLTPITNQQSSYTAKLTAYGTLKSALEKFQTANTALNKADLFSSTKVSsSTT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181  80 QFTITTTNKAVPGNYSVEVQKLAQPQTLTTqATITDQQEKLGTAgNSDRSITITAGDPPKETTIPLSDDQTSLLEMRDAI 159
Cdd:PRK08032  81 AFSATTDSGASAGKYTISVTQLAQAQSLTT-ATVSSTKEALGTS-DSTRTITITQPGRKEPLEIDLTAGQTSLSGIRDAI 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 160 NGAKAGVTASIMRVGDNDYQLALSSSTTGEKNTVSVQVNNDDKLGAILNYDSSSNSGAMKQTVAGQDAEIVVNGTKIKRS 239
Cdd:PRK08032 159 NKAEGGVSASIIKVGDGEYRLVLTSKDTGTDNAMTISVEGDSKLNDFLNYDSSTGSGNMTQSVAAQNAKLTVNGIAIERQ 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 240 TNSIADALQGVTIDLKTTTKAGepQNLVIGIDKSGTADKIKEWVDNYNSLLDTFGSLTKYTPVKSGEAQSAKNGALLGDN 319
Cdd:PRK08032 239 SNTITDAPEGITLNLKKVTTGN--QTLTITKDTTKAKEAIKDWVDAYNSLQDTFSSLTKYTAVDAGADQSSSNGALLGDS 316

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 320 TLRGIQSSIKSALSAAQDNPELKGLGNLGISTNPKTGKLEVDSTKLNKALDEKPDQVANFFAGNGKDTGMATEIHNEIQN 399
Cdd:PRK08032 317 TLRTIQTQLKSQLANSQSSSDFKTLAQIGITQDPSDGKLEIDDDKLTKALKEDPAGVKALFVGDGKKTGITTQIATNLKS 396

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 505180181 400 YIKAGGIIENSTKSINTNLDRLNVQIDTVSDSIQNTIDRYKQQFVQLDTMMSKLSSTGNYLQQQFS 465
Cdd:PRK08032 397 WLSTTGIIKTATDGVNKTLKKLTKQYNAVSDSIDATIARYKAQFTQLDKLMTSLNSTSSYLTQQFE 462
FliD COG1345
Flagellar capping protein FliD [Cell motility];
1-467 4.04e-149

Flagellar capping protein FliD [Cell motility];


Pssm-ID: 440956 [Multi-domain]  Cd Length: 450  Bit Score: 432.34  E-value: 4.04e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181   1 MASISSLGIGSGLDLNGLLDKLSKAEQQRLTPYTTQQTSYNAQLTAYGTLKSSLEKFDNLSKELAKPEFFNSTTAT--KH 78
Cdd:COG1345    1 MASISSLGLGSGLDTDSLVSQLMAAERAPLTRLTQQQTSLEAQISAYGTLKSALSSLQDALSALKKSSTFNAKKATssNE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181  79 DQFTITTTNKAVPGNYSVEVQKLAQPQTLTTQAtITDQQEKLGTAgnsdrSITITAGDPpKETTIPLsDDQTSLLEMRDA 158
Cdd:COG1345   81 SAVTATATSGAAAGSYSIEVTQLAQAQSLASAA-FASATTTLGTG-----TLTITVGDG-KTVTITI-DANDTLADIADA 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 159 INGAKAGVTASIMRvgDNDYQLALSSSTTGEKNTVSVQVNNDDKLGAILNYDSSSNsgaMKQTVAGQDAEIVVNGTKIKR 238
Cdd:COG1345  153 INAAGAGVTASIVN--DGSYRLVLTSKKTGAANAITVSVSGDGALSALLGFDPASG---MTETQAAQDAKLTVNGITITS 227

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 239 STNSIADALQGVTIDLKTTTkaGEPQNLVIGIDKSGTADKIKEWVDNYNSLLDTFGSLTKYTPvksgEAQSAKNGALLGD 318
Cdd:COG1345  228 SSNTFTDAIDGVTLTLKKVT--GGPVTLTVSTDTDAIKKAIKDFVDAYNELIDTINSLTKYTK----DEETAKAGALLGD 301

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 319 NTLRGIQSSIKSALSAAQD-NPELKGLGNLGISTNpKTGKLEVDSTKLNKALDEKPDQVANFFAGNGKDTGMATEIHNEI 397
Cdd:COG1345  302 STLRSLQSQLRSALSSPVSgGGSYKSLSDIGITTD-KDGKLELDETKLDKALAEDPDAVAKLFTGDGKTTGIATRLDDLL 380

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 398 QNYIKAGGIIENSTKSINTNLDRLNVQIDTVSDSIQNTIDRYKQQFVQLDTMMSKLSSTGNYLQQQFSSQ 467
Cdd:COG1345  381 DSYTGSDGTITSRTDGLNKQLKDLDDQIERLEDRLEAREARYRKQFTALDTAMSQLNSQSSYLTQQLASL 450
FliD_C pfam07195
Flagellar hook-associated protein 2 C-terminus; The flagellar hook-associated protein 2 (HAP2 ...
 224-455 1.97e-58

Flagellar hook-associated protein 2 C-terminus; The flagellar hook-associated protein 2 (HAP2 or FliD) forms the distal end of the flagella, and plays a role in mucin specific adhesion of the bacteria. This alignment covers the C-terminal region of this family of proteins.


Pssm-ID: 429344 [Multi-domain]  Cd Length: 230  Bit Score: 192.12  E-value: 1.97e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181  224 GQDAEIVVNGTKIKRSTNSIADALQGVTIDLKTTTKAGEPqNLVIGIDKSGTADKIKEWVDNYNSLLDTFGSLTKYTpvk 303
Cdd:pfam07195   1 AQNAEFTVDGIKVTSSSNTVTDVIDGVTLNLTKTTEGGET-TLSVSTDTDGIKEAIKDFVDAYNELITTINELTSYT--- 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181  304 sGEAQSAKNGALLGDNTLRGIQSSIKSALSAAQDNPELKGLGNLGISTNPKTGKLEVDSTKLNKALDEKPDQVANFFAGN 383
Cdd:pfam07195  77 -LDEETKKAGALAGDSTLRSILSQLRSVLSSSVSDGSISSLADIGITTDSDYGTLELDEEKLDKALKENPDSVAELFTGD 155

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 505180181  384 GK--DTGMATEIHNEIQNYIKAG-GIIENSTKSINTNLDRLNVQIDTVSDSIQNTIDRYKQQFVQLDTMMSKLSS 455
Cdd:pfam07195 156 GSrvDTGFAKRLTDLLKSYVGASnGTIAGRSDSLNKQIKRLDKQIEDLDKRLETLEARLTAQFTAMDTAVSKMNA 230
 
Name Accession Description Interval E-value
fliD PRK08032
flagellar capping protein; Reviewed
 1-465 5.09e-176

flagellar capping protein; Reviewed


Pssm-ID: 236141 [Multi-domain]  Cd Length: 462  Bit Score: 501.53  E-value: 5.09e-176
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181   1 MASISSLGIGSGLDLNGLLDKLSKAEQQRLTPYTTQQTSYNAQLTAYGTLKSSLEKFDNLSKELAKPEFFNSTTAT-KHD 79
Cdd:PRK08032   1 MASISSLGVGSGLDLDSLLDSLTAAEKKRLTPITNQQSSYTAKLTAYGTLKSALEKFQTANTALNKADLFSSTKVSsSTT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181  80 QFTITTTNKAVPGNYSVEVQKLAQPQTLTTqATITDQQEKLGTAgNSDRSITITAGDPPKETTIPLSDDQTSLLEMRDAI 159
Cdd:PRK08032  81 AFSATTDSGASAGKYTISVTQLAQAQSLTT-ATVSSTKEALGTS-DSTRTITITQPGRKEPLEIDLTAGQTSLSGIRDAI 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 160 NGAKAGVTASIMRVGDNDYQLALSSSTTGEKNTVSVQVNNDDKLGAILNYDSSSNSGAMKQTVAGQDAEIVVNGTKIKRS 239
Cdd:PRK08032 159 NKAEGGVSASIIKVGDGEYRLVLTSKDTGTDNAMTISVEGDSKLNDFLNYDSSTGSGNMTQSVAAQNAKLTVNGIAIERQ 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 240 TNSIADALQGVTIDLKTTTKAGepQNLVIGIDKSGTADKIKEWVDNYNSLLDTFGSLTKYTPVKSGEAQSAKNGALLGDN 319
Cdd:PRK08032 239 SNTITDAPEGITLNLKKVTTGN--QTLTITKDTTKAKEAIKDWVDAYNSLQDTFSSLTKYTAVDAGADQSSSNGALLGDS 316

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 320 TLRGIQSSIKSALSAAQDNPELKGLGNLGISTNPKTGKLEVDSTKLNKALDEKPDQVANFFAGNGKDTGMATEIHNEIQN 399
Cdd:PRK08032 317 TLRTIQTQLKSQLANSQSSSDFKTLAQIGITQDPSDGKLEIDDDKLTKALKEDPAGVKALFVGDGKKTGITTQIATNLKS 396

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 505180181 400 YIKAGGIIENSTKSINTNLDRLNVQIDTVSDSIQNTIDRYKQQFVQLDTMMSKLSSTGNYLQQQFS 465
Cdd:PRK08032 397 WLSTTGIIKTATDGVNKTLKKLTKQYNAVSDSIDATIARYKAQFTQLDKLMTSLNSTSSYLTQQFE 462
FliD COG1345
Flagellar capping protein FliD [Cell motility];
1-467 4.04e-149

Flagellar capping protein FliD [Cell motility];


Pssm-ID: 440956 [Multi-domain]  Cd Length: 450  Bit Score: 432.34  E-value: 4.04e-149
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181   1 MASISSLGIGSGLDLNGLLDKLSKAEQQRLTPYTTQQTSYNAQLTAYGTLKSSLEKFDNLSKELAKPEFFNSTTAT--KH 78
Cdd:COG1345    1 MASISSLGLGSGLDTDSLVSQLMAAERAPLTRLTQQQTSLEAQISAYGTLKSALSSLQDALSALKKSSTFNAKKATssNE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181  79 DQFTITTTNKAVPGNYSVEVQKLAQPQTLTTQAtITDQQEKLGTAgnsdrSITITAGDPpKETTIPLsDDQTSLLEMRDA 158
Cdd:COG1345   81 SAVTATATSGAAAGSYSIEVTQLAQAQSLASAA-FASATTTLGTG-----TLTITVGDG-KTVTITI-DANDTLADIADA 152

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 159 INGAKAGVTASIMRvgDNDYQLALSSSTTGEKNTVSVQVNNDDKLGAILNYDSSSNsgaMKQTVAGQDAEIVVNGTKIKR 238
Cdd:COG1345  153 INAAGAGVTASIVN--DGSYRLVLTSKKTGAANAITVSVSGDGALSALLGFDPASG---MTETQAAQDAKLTVNGITITS 227

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 239 STNSIADALQGVTIDLKTTTkaGEPQNLVIGIDKSGTADKIKEWVDNYNSLLDTFGSLTKYTPvksgEAQSAKNGALLGD 318
Cdd:COG1345  228 SSNTFTDAIDGVTLTLKKVT--GGPVTLTVSTDTDAIKKAIKDFVDAYNELIDTINSLTKYTK----DEETAKAGALLGD 301

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 319 NTLRGIQSSIKSALSAAQD-NPELKGLGNLGISTNpKTGKLEVDSTKLNKALDEKPDQVANFFAGNGKDTGMATEIHNEI 397
Cdd:COG1345  302 STLRSLQSQLRSALSSPVSgGGSYKSLSDIGITTD-KDGKLELDETKLDKALAEDPDAVAKLFTGDGKTTGIATRLDDLL 380

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 398 QNYIKAGGIIENSTKSINTNLDRLNVQIDTVSDSIQNTIDRYKQQFVQLDTMMSKLSSTGNYLQQQFSSQ 467
Cdd:COG1345  381 DSYTGSDGTITSRTDGLNKQLKDLDDQIERLEDRLEAREARYRKQFTALDTAMSQLNSQSSYLTQQLASL 450
FliD_C pfam07195
Flagellar hook-associated protein 2 C-terminus; The flagellar hook-associated protein 2 (HAP2 ...
 224-455 1.97e-58

Flagellar hook-associated protein 2 C-terminus; The flagellar hook-associated protein 2 (HAP2 or FliD) forms the distal end of the flagella, and plays a role in mucin specific adhesion of the bacteria. This alignment covers the C-terminal region of this family of proteins.


Pssm-ID: 429344 [Multi-domain]  Cd Length: 230  Bit Score: 192.12  E-value: 1.97e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181  224 GQDAEIVVNGTKIKRSTNSIADALQGVTIDLKTTTKAGEPqNLVIGIDKSGTADKIKEWVDNYNSLLDTFGSLTKYTpvk 303
Cdd:pfam07195   1 AQNAEFTVDGIKVTSSSNTVTDVIDGVTLNLTKTTEGGET-TLSVSTDTDGIKEAIKDFVDAYNELITTINELTSYT--- 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181  304 sGEAQSAKNGALLGDNTLRGIQSSIKSALSAAQDNPELKGLGNLGISTNPKTGKLEVDSTKLNKALDEKPDQVANFFAGN 383
Cdd:pfam07195  77 -LDEETKKAGALAGDSTLRSILSQLRSVLSSSVSDGSISSLADIGITTDSDYGTLELDEEKLDKALKENPDSVAELFTGD 155

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 505180181  384 GK--DTGMATEIHNEIQNYIKAG-GIIENSTKSINTNLDRLNVQIDTVSDSIQNTIDRYKQQFVQLDTMMSKLSS 455
Cdd:pfam07195 156 GSrvDTGFAKRLTDLLKSYVGASnGTIAGRSDSLNKQIKRLDKQIEDLDKRLETLEARLTAQFTAMDTAVSKMNA 230
fliD PRK07737
flagellar hook-associated protein 2;
8-464 3.40e-36

flagellar hook-associated protein 2;


Pssm-ID: 236082 [Multi-domain]  Cd Length: 501  Bit Score: 139.55  E-value: 3.40e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181   8 GIGSGLDLNGLLDKLSKAEQQRLTPYTTQQTSYNAQLTAYGTLKSSLEKFDN-LSKELAKPEFFNSTTATKHDQFTITTT 86
Cdd:PRK07737   7 GLASGMDIDDIVSKLMKTERAPLDKLTQKKQTLEWQRDSYREMNTLLKDLDDyIFNNITRQSTYLKKTVTSSNESVVTAT 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181  87 NKAVPGNYSVE--VQKLAQPQTLTTQATITDQqeklgTAGNSDRSITITAGDPPKETTIPLSDDQTSLLE-MRDAINGAK 163
Cdd:PRK07737  87 ASSSAANGSTTmqVTQLATAATWKSSAKTSFY-----TGADQTLTFNVTNPGETTAKTVEISVKQTDTLDdVISKLNSSD 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 164 AGVTA---SIMRVGDNDYQLALSSSTTGEKNTVSVQVNND-DKLGAILNYDSSSNSGAMKQTVAGQDAEIVVNGTKIKRS 239
Cdd:PRK07737 162 LGVSAfkdKIWNGTEYVETIAITSKATGAGASIQAADGATaSFFSQQLGFTNLDADNELTAKTEGQNAQVTINGLQTERT 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 240 TNSIAdaLQGVTIDLKTTTKAgePQNLVIGIDKSGTADKIKEWVDNYNSLLDTFGSLTK------YTPVKSGEAQS---- 309
Cdd:PRK07737 242 SNTFT--INGVTYTLKNTTAG--TVTLSVATDVDGIFNKIKDFVDKYNELIDKINAKLKeeryrdYPPLTDEQKEAmtek 317

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 310 --------AKNGALLGDNTLRGIQSSIKSAL--SAAQDNPELKGLGNLGISTNPK---TGKLEVDSTKLNKALDEKPDQV 376
Cdd:PRK07737 318 qielweekAKSGLLRGDSILSSALSKMRMDFytKVEGIDGGFSQLAQIGITTSSNyldGGKLEIDETKLRQKIKENPDAV 397

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 377 ANFF-----AGNGKDTGMATEIHNEIQNYI-----KAGG-IIENSTKSINTNLDRLNVQIDTVSDSIQNTIDRYKQQFVQ 445
Cdd:PRK07737 398 YQLFnsggsSSNYNEKGIARRLRDTLKETIksieqKAGNtTMTNQQFAIGKDLNQIETQIDRFQDRLKQIEDRYYKKFSA 477

                        490
                 ....*....|....*....
gi 505180181 446 LDTMMSKLSSTGNYLQQQF 464
Cdd:PRK07737 478 MEKAIQKANEQSMYLMNAL 496
fliD PRK06798
flagellar hook-associated protein 2;
13-453 1.15e-34

flagellar hook-associated protein 2;


Pssm-ID: 180698 [Multi-domain]  Cd Length: 440  Bit Score: 134.52  E-value: 1.15e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181  13 LDLNGLLDKLSKAEQQRLTPYTTQQTSYNAQLTAYGTLKSSLEKFDNLSKELAKpefFNS----TTATKHDQFTITTTNK 88
Cdd:PRK06798  22 IDTSNFVELELQALEMKKTPYTNQKQSLTSEKLLYASLKKEFSSFLQTFKDLTT---FKGnekkVTLSQEGYITVQADAS 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181  89 AVPGNYSVEVQKLAQPQTLTTQAtITDQQEKLGtagnsdRSITITAGDppKETTIplsDDQTSLLEMRDAINGAKAGVta 168
Cdd:PRK06798  99 AIAGTYNITVENLAQRHQITSKP-VPDIDAKIG------VDETIKING--KEIKV---TKDMTYKDLINKINSGNYGV-- 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 169 SIMRVGDndyQLALSSSTTGEKNTVSVQVNNDDKLGAILNYDSSSnsGAMKQTVAGQDAEIVVNGTKIKRSTNSIaDALQ 248
Cdd:PRK06798 165 SAYTLGN---KIFFTSTTEGEEGSIKFTDGDSGFLEAIGLVQSSG--VAANDITAAENAEYTINGIKGTSATNKI-ETIP 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 249 GVTIDLKTTTkaGEPQNLVIG-IDKSGTADKIKEWVDNYNSLldtfgsltkytpVKSGEAQSAKNGALLGDNTLRGIQSS 327
Cdd:PRK06798 239 GVTINLKKET--TEPIKLTIQdSNVKDAANLIKKMVDEYNKA------------VSTVDLFAGKGGALQGSAIMFSINRA 304

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 328 IKSALSAAQDNpelKGLGNLGISTNpKTGKLEVDSTKLNKALDEKPDQVANFFAGNGkdtGMATEIHNEIQNYIKAGGII 407
Cdd:PRK06798 305 MNNVFTFSQDG---NYLFSFGIQVD-KEGTMKVDEEALKKALKENPDAAKQFFFGIN---GLGKEMEKSLDKIFGDEGII 377

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|
gi 505180181 408 ENSTKSIN---TNLDRLNVQIDTVSDSIQNTI-DRYKQQFVQLDTMMSKL 453
Cdd:PRK06798 378 GERSKSIDnrvSKLDLKITDIDTQNKQKQDNIvDKYQKLESTLAALDSQL 427
PRK12765 PRK12765
flagellar filament capping protein FliD;
3-437 3.13e-30

flagellar filament capping protein FliD;


Pssm-ID: 237194 [Multi-domain]  Cd Length: 595  Bit Score: 123.85  E-value: 3.13e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181   3 SISSLGIGSGLDLN-GLLDKLSKAEQQ-RLTPYTTQQTSYNAQLTAYGTLKSSLEKFDNLSKELAKPEFF--NSTTATKH 78
Cdd:PRK12765   5 SLSSLGFGSDGVLSqDTIDKLKEADQKaQIDPITTKIEENTTKQKDLTAIKTLLSNFKTSVSSLADETSYlkRKVSISDN 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181  79 DQFTITTTNKAVPGNYSVEVQKLAQPQTLTTQATITDQqEKLGTAGNSDRSITITAGDPPKETTIplsDDQTSLLEMRDA 158
Cdd:PRK12765  85 PPASVTVNSGVNLQSMKINVSQLAQKDVYQSKGFANDS-SFVNATLTGETDLTIFSNGKEYTITV---DKSTTYRDLADK 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 159 INGAKAG-VTASIMRVG-DNDYQLALSSSTTGEKNTVSVQVNND------------DKLGAILNYDSSSNSGAMKQTV-- 222
Cdd:PRK12765 161 INEASGGkIQAKILNVGgKNPYRLVLQSKETGADNAISFYAGKKdaqsdndaenifKSLGWDLDDTSTIDPGKDKKGYgi 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 223 --------AGQDAEIVVNGTKIKRSTNSIADALQGVTIDLKTTTKAgepqNLVIGIDKSGTADKIKEWVDNYNSLLDTFG 294
Cdd:PRK12765 241 kdaslhiqTAQNAEFTYNGIKITRSSNTIDDLGVGVTLTLNKTGSI----NFDIQQDTEGVTKAVEDLVDAYNNLVTNLN 316

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 295 SLTKYtpvksgEAQSAKNGALLGDNTLRGIQSSIK----SALSAAQDNpELKGLGNLGISTNpKTGKLEVDSTKLNKALD 370
Cdd:PRK12765 317 AATSY------NSETGTKGTFQGVSEITSIRSSILadlfSQVVDGTDE-DGKSLQDFGLSLN-SDGTLSFDSSKFEQKVS 388

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 505180181 371 EKPDQVANFFAGNGKdtgmaTEIHNEIQNYIKAGGiIENSTKSINTNLDRLNVQIDTVSDSIQNTID 437
Cdd:PRK12765 389 EDPDSTQSFFSGSTK-----YEDISHTGEVVKSGS-LNIQTGDLTINGKGINFKTLTGKTAEENALN 449
fliD PRK06664
flagellar hook-associated protein FliD; Validated
 185-461 1.68e-23

flagellar hook-associated protein FliD; Validated


Pssm-ID: 235848 [Multi-domain]  Cd Length: 661  Bit Score: 103.69  E-value: 1.68e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 185 STTGEKNTVSVQVNN--DDKLGAILN--------------YDSSSNSGAM--KQTVAGQDAEIVVNGTKIKRSTNSIADA 246
Cdd:PRK06664 333 NASDNFEKVELPLGElsDLKALNIENnannkaivirnieiFDPKARGGALpvNAKSEAKDAKIKFDGVEVERDKNEITDL 412

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 247 LQGVTIDLKTTTKagEPQNLVIGIDKSGTADKIKEWVDNYNSLL------------DTFGSLTKYTPVKSGEAQSaKNGA 314
Cdd:PRK06664 413 IPGVTLNLHKASE--DPVTLKIEPDYEKIKNLIIEFVAAYNEVLaeinivtsneksSIIEELTYLSDEEKEEAYK-NLGL 489

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 315 LLGDNTLRGIQSSIKSALSA---AQDNPELKGLGNLGISTNP--------KTGKLEVDSTKLNKALDEKPDQVANFFA-- 381
Cdd:PRK06664 490 LRGEFTLLRLKSRLKTIISSsypTSDDNAFRMLNQIGISTNSvgssggliQDGYLELDEKKLDEVLKENPDSVRELFAfd 569

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 382 GNGK---DTGMATEIHNEIQNYIKAGGIIENSTKSINTNLDRLNVQIDTVSDSIQNTIDRYKQQFVQLDTMMSKLSSTGN 458
Cdd:PRK06664 570 SNGDavmDNGVAKMLLEYLSPYTQAGGIIYNKVKGLDERIADNNKKIEEYEKKLESKERKLKGKYLTMDQTVKKMKEQSN 649


                 ...
gi 505180181 459 YLQ 461
Cdd:PRK06664 650 YLK 652
fliD PRK08724
flagellar filament capping protein FliD;
216-453 4.15e-22

flagellar filament capping protein FliD;


Pssm-ID: 236335 [Multi-domain]  Cd Length: 673  Bit Score: 99.56  E-value: 4.15e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 216 GAMKQTVAGQDAEIVVNG-TKIKRSTNSIADALQGVTIDLK-TTTKAGEPQNLVIGIDKSGTADKIKEWVDNYNSLLDTF 293
Cdd:PRK08724 430 SGMTEVQSAQDSMVVLDGvAQLSSNNNVIEDAIEGVDLTLKgKTDKNKPPAEIGVEYDRQSVRNDIEQFVAAYNQFYQTS 509

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 294 GSLTKYTPVksgeaqSAKNGALLGDNTLRGIQSSIKSALSAA-QDNPE-LKGLGNLGISTNpKTGKLEVDSTKLNKALDE 371
Cdd:PRK08724 510 KALSGVDPA------TGQKGPLAGDSTVRSADSRLKSVFSSSiEQAPEnLKSLTEFGITTT-RQGTLEINYDMLDRQLNN 582

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 372 KPDQVANFFAGNgkdTGMATEIHNEIQNYIKAGGIIENSTKSINTNLDRLN---VQIDTVSDSIQNtidRYKQQFV---- 444
Cdd:PRK08724 583 NFNKLEEFFGGN---TGFAKRVEDAIQSMTGVTGSIRTREKSLREQNYRLNddqVALDRRMESLEK---RTHAKFAamqd 656

                        250
                 ....*....|....*.
gi 505180181 445 -------QLDTMMSKL 453
Cdd:PRK08724 657 atgkmqgQLGGMMNAL 672
FliD_N pfam02465
Flagellar hook-associated protein 2 N-terminus; The flagellar hook-associated protein 2 (HAP2 ...
 11-105 9.50e-22

Flagellar hook-associated protein 2 N-terminus; The flagellar hook-associated protein 2 (HAP2 or FliD) forms the distal end of the flagella, and plays a role in mucin specific adhesion of the bacteria. This alignment covers the N-terminal region of this family of proteins.


Pssm-ID: 460566 [Multi-domain]  Cd Length: 97  Bit Score: 89.55  E-value: 9.50e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181   11 SGLDLNGLLDKLSKAEQQRLTPYTTQQTSYNAQLTAYGTLKSSLEKFDNLSKELAKPEFFNSTTATKHDQ--FTITTTNK 88
Cdd:pfam02465   1 SGLDTDSIVDQLMAAERAPLDRLEQQKTTLEWKQSAYGELNSKLSSLQSALKALSSSSTFNAKKATSSNEsvVTATASSG 80

                          90
                  ....*....|....*..
gi 505180181   89 AVPGNYSVEVQKLAQPQ 105
Cdd:pfam02465  81 AAAGSYSIEVTQLAQAQ 97
fliD PRK08453
flagellar filament capping protein FliD;
202-461 3.67e-21

flagellar filament capping protein FliD;


Pssm-ID: 181432 [Multi-domain]  Cd Length: 673  Bit Score: 96.45  E-value: 3.67e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 202 KLGAILNY-DSSSNSGAMKQTVAGQDAEIVVNGTKIKRSTNSIADALQGVTIDLKTTTKAGEPQNLVIGIDKSGTADKIK 280
Cdd:PRK08453 409 KAGTVQSYeASQETLFMSKNLQKASDAKFTYNGVSITRPTNEVNDVISGVNITLEQTTEPNKPAIISVSRDNQAIIDSLK 488

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 281 EWVDNYNSLLDTFGSLTKYtpvksgEAQSAKNGALLGDNTLRGIQSSIKSALS-AAQDNPELKGLGNLGISTNPKtGKLE 359
Cdd:PRK08453 489 EFVKAYNELIPKLDEDTRY------DADTKIAGIFNGVGDIRSIRSSLNNVFSySVHTDNGVESLMKYGLSLDEK-GVMT 561

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181 360 VDSTKLNKALDEKPDQVANFFAGN------GKDT---GMATEIHNEIQNYIKAGG----IIENSTKSINTNL--DRLNVQ 424
Cdd:PRK08453 562 LDEAKLSSALNSDPKATQDFFYGSdskdmgGREIhqeGIFSKFNQVIANLIDGGNaklkIYEDSLTRDAKSLtkDKENAQ 641

                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 505180181 425 IDtvsdsIQNTIDRYKQQFVQLDTMMSKLSSTGNYLQ 461
Cdd:PRK08453 642 EL-----LKTRYDIMAERFAAYDSQISKANQKFNSVQ 673
fliD PRK08724
flagellar filament capping protein FliD;
3-201 9.40e-14

flagellar filament capping protein FliD;


Pssm-ID: 236335 [Multi-domain]  Cd Length: 673  Bit Score: 73.37  E-value: 9.40e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181   3 SISSLGIGSGLDLNGLLDKLSKAE----QQRLtpyTTQQTSYNAQLTAYGTLKSSLEKFDNLSKELAKPEFFNSTT--AT 76
Cdd:PRK08724   2 SLGPMGMSGGMDINSMVSKIVDAErvpkQQRI---DNERTDIDTSISAYGRLRESLDTMKNLMTNFRQEKAFAVRTvdTS 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505180181  77 KHDQFTITTTNKAVPGNYSVEVQKLAQPQTLTTQatITDQQEKLGTAgnsdrSITITAGDppKETTIPLSdDQTSLLEMR 156
Cdd:PRK08724  79 DEDVVSATATTDAIAGKYAIDVLQLAQSHKVASD--VLDEDAKFGPG-----KLQISLGD--KSFTLDVV-GNSKLVDIV 148

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 505180181 157 DAINGAKA--GVTASIMRvGDNDYQLALSSSTTGEKNTVSVQVNNDD 201
Cdd:PRK08724 149 RGINGAKSnpGVRASIIN-DVEGPRLILASNVSGKDNQIKISVDAEY 194
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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