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Conserved domains on  [gi|505181473|ref|WP_015368575|]
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MULTISPECIES: DUF4312 family protein [Klebsiella]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4312 super family cl11917
Domain of unknown function (DUF4312); This family of proteins is functionally uncharacterized. ...
 2-97 3.14e-43

Domain of unknown function (DUF4312); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 99 and 118 amino acids in length.


The actual alignment was detected with superfamily member TIGR03578:

Pssm-ID: 448361  Cd Length: 96  Bit Score: 136.00  E-value: 3.14e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181473   2 KEQFTTTVRVAGKGESKSRAFADALNHVQAAVMKSSSRILLRIEPQDVTVVHAREAVRKEAFLFIFLRRERRTYSVELDV 81
Cdd:TIGR03578  1 KKMITTTVIVSGKGNTKQLAFASALSKIQKKVMKENPAVLLRIEPVDVHILKAEESVYTEKFLFFFFPRKRREYSVELDV 80

                         90
                 ....*....|....*.
gi 505181473  82 TVNVTAIDLDKVDFVT 97
Cdd:TIGR03578 81 TVKVTAIKVEEVDFKK 96
 
Name Accession Description Interval E-value
EF_0831 TIGR03578
conserved hypothetical protein EF_0831/AHA_3912; Members of this family of small (about 100 ...
 2-97 3.14e-43

conserved hypothetical protein EF_0831/AHA_3912; Members of this family of small (about 100 amino acid), relatively rare proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown. [Hypothetical proteins, Conserved]


Pssm-ID: 213831  Cd Length: 96  Bit Score: 136.00  E-value: 3.14e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181473   2 KEQFTTTVRVAGKGESKSRAFADALNHVQAAVMKSSSRILLRIEPQDVTVVHAREAVRKEAFLFIFLRRERRTYSVELDV 81
Cdd:TIGR03578  1 KKMITTTVIVSGKGNTKQLAFASALSKIQKKVMKENPAVLLRIEPVDVHILKAEESVYTEKFLFFFFPRKRREYSVELDV 80

                         90
                 ....*....|....*.
gi 505181473  82 TVNVTAIDLDKVDFVT 97
Cdd:TIGR03578 81 TVKVTAIKVEEVDFKK 96
DUF4312 pfam14189
Domain of unknown function (DUF4312); This family of proteins is functionally uncharacterized. ...
 5-88 4.70e-33

Domain of unknown function (DUF4312); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 99 and 118 amino acids in length.


Pssm-ID: 433760  Cd Length: 84  Bit Score: 109.69  E-value: 4.70e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181473   5 FTTTVRVAGKGESKSRAFADALNHVQAAVMKSSSRILLRIEPQDVTVVHAREAVRKEAFLFIFLRRERRTYSVELDVTVN 84
Cdd:pfam14189  1 FTTTVRVSGKGDTKEEAFASALSQVQKTVLKDTNGVVLRIEPVDVKVVSAEEEVYTEKFLFFFLPRKRREYDVELDITVE 80


                 ....
gi 505181473  85 VTAI 88
Cdd:pfam14189 81 VTWI 84
PTZ00297 PTZ00297
pantothenate kinase; Provisional
 2-59 7.98e-03

pantothenate kinase; Provisional


Pssm-ID: 140318 [Multi-domain]  Cd Length: 1452  Bit Score: 34.06  E-value: 7.98e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 505181473    2 KEQFTTTVRVAGKGESKSRAFADALNHVQAAVMKSSSRI------LLRIEPQDVTVVHAREAVR 59
Cdd:PTZ00297 1135 KPQYRTKVRATGGGAFKYASVAKKVLGINFSVMREMDAVvkglnlVIRVAPESIFTVDPSTGVH 1198
 
Name Accession Description Interval E-value
EF_0831 TIGR03578
conserved hypothetical protein EF_0831/AHA_3912; Members of this family of small (about 100 ...
 2-97 3.14e-43

conserved hypothetical protein EF_0831/AHA_3912; Members of this family of small (about 100 amino acid), relatively rare proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown. [Hypothetical proteins, Conserved]


Pssm-ID: 213831  Cd Length: 96  Bit Score: 136.00  E-value: 3.14e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181473   2 KEQFTTTVRVAGKGESKSRAFADALNHVQAAVMKSSSRILLRIEPQDVTVVHAREAVRKEAFLFIFLRRERRTYSVELDV 81
Cdd:TIGR03578  1 KKMITTTVIVSGKGNTKQLAFASALSKIQKKVMKENPAVLLRIEPVDVHILKAEESVYTEKFLFFFFPRKRREYSVELDV 80

                         90
                 ....*....|....*.
gi 505181473  82 TVNVTAIDLDKVDFVT 97
Cdd:TIGR03578 81 TVKVTAIKVEEVDFKK 96
DUF4312 pfam14189
Domain of unknown function (DUF4312); This family of proteins is functionally uncharacterized. ...
 5-88 4.70e-33

Domain of unknown function (DUF4312); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 99 and 118 amino acids in length.


Pssm-ID: 433760  Cd Length: 84  Bit Score: 109.69  E-value: 4.70e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181473   5 FTTTVRVAGKGESKSRAFADALNHVQAAVMKSSSRILLRIEPQDVTVVHAREAVRKEAFLFIFLRRERRTYSVELDVTVN 84
Cdd:pfam14189  1 FTTTVRVSGKGDTKEEAFASALSQVQKTVLKDTNGVVLRIEPVDVKVVSAEEEVYTEKFLFFFLPRKRREYDVELDITVE 80


                 ....
gi 505181473  85 VTAI 88
Cdd:pfam14189 81 VTWI 84
PTZ00297 PTZ00297
pantothenate kinase; Provisional
 2-59 7.98e-03

pantothenate kinase; Provisional


Pssm-ID: 140318 [Multi-domain]  Cd Length: 1452  Bit Score: 34.06  E-value: 7.98e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 505181473    2 KEQFTTTVRVAGKGESKSRAFADALNHVQAAVMKSSSRI------LLRIEPQDVTVVHAREAVR 59
Cdd:PTZ00297 1135 KPQYRTKVRATGGGAFKYASVAKKVLGINFSVMREMDAVvkglnlVIRVAPESIFTVDPSTGVH 1198
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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