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Conserved domains on  [gi|505181512|ref|WP_015368614|]
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MULTISPECIES: PTS ascorbate transporter subunit IIA [Klebsiella]

Protein Classification

PTS ascorbate transporter subunit IIA( domain architecture ID 10793384)

PTS ascorbate transporter subunit IIA is part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active transport system that catalyzes the phosphorylation of incoming substrates (such as ascorbate) concomitantly with their translocation across the cell membrane

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK10372 PRK10372
PTS ascorbate transporter subunit IIA;
1-154 6.13e-117

PTS ascorbate transporter subunit IIA;


:

Pssm-ID: 182417 [Multi-domain]  Cd Length: 154  Bit Score: 326.55  E-value: 6.13e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181512   1 MKLHDSLAQNHSIRLQAEAESWQEAVKIGVDLLVAADVVEPRYYQAILDGVAQHGPYFVIAPGLAMPHGRPEEGVKKTGF 80
Cdd:PRK10372   1 MKLRDSLAENKSIRLQAEAETWQEAVKIGVDLLVAADVVEPRYYQAILDGVEQFGPYFVIAPGLAMPHGRPEEGVKKTGF 80
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 505181512  81 ALVTLKKPLIFNHEDNDPVDILITMAAVDATTHQEVGIMQIVNLFDDEANFDRLRACRTEQEVLDLIENATAAA 154
Cdd:PRK10372  81 ALVTLKKPLEFNHEDNDPVDILITMAAVDANTHQEVGIMQIVNLFEDEANFDRLRACRTEQEVLDLIDRTNAAA 154
 
Name Accession Description Interval E-value
PRK10372 PRK10372
PTS ascorbate transporter subunit IIA;
1-154 6.13e-117

PTS ascorbate transporter subunit IIA;


Pssm-ID: 182417 [Multi-domain]  Cd Length: 154  Bit Score: 326.55  E-value: 6.13e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181512   1 MKLHDSLAQNHSIRLQAEAESWQEAVKIGVDLLVAADVVEPRYYQAILDGVAQHGPYFVIAPGLAMPHGRPEEGVKKTGF 80
Cdd:PRK10372   1 MKLRDSLAENKSIRLQAEAETWQEAVKIGVDLLVAADVVEPRYYQAILDGVEQFGPYFVIAPGLAMPHGRPEEGVKKTGF 80
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 505181512  81 ALVTLKKPLIFNHEDNDPVDILITMAAVDATTHQEVGIMQIVNLFDDEANFDRLRACRTEQEVLDLIENATAAA 154
Cdd:PRK10372  81 ALVTLKKPLEFNHEDNDPVDILITMAAVDANTHQEVGIMQIVNLFEDEANFDRLRACRTEQEVLDLIDRTNAAA 154
PtsN COG1762
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) [Carbohydrate ...
1-150 8.46e-39

Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) [Carbohydrate transport and metabolism, Signal transduction mechanisms];


Pssm-ID: 441368 [Multi-domain]  Cd Length: 150  Bit Score: 128.82  E-value: 8.46e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181512   1 MKLHDSLAQNHsIRLQAEAESWQEAVKIGVDLLVAADVV--EPRYYQAILDGVAQHGPYfvIAPGLAMPHGRPEeGVKKT 78
Cdd:COG1762    1 MMLSDLLTPEL-ILLDLEASSKEEAIEELAELLAEKGYVldKEEYLEALLEREELGSTG--IGPGIAIPHARPE-GVKKP 76
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 505181512  79 GFALVTLKKPLIFNHEDNDPVDILITMAA--VDATTHQEVgIMQIVNLFDDEANFDRLRACRTEQEVLDLIENA 150
Cdd:COG1762   77 GIAVARLKEPVDFGAMDGEPVDLVFLLAApeDDSEEHLKL-LAELARLLSDEEFREKLLNAKSPEEILELLKEA 149
PTS_IIA_fru cd00211
PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: ...
10-147 3.05e-38

PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.


Pssm-ID: 238129 [Multi-domain]  Cd Length: 136  Bit Score: 126.91  E-value: 3.05e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181512  10 NHSIRLQAEAESWQEAVKIGVDLLVAADVVEPRYYQAILDGVAQhGPYFVIaPGLAMPHGRPEEgVKKTGFALVTLKKPL 89
Cdd:cd00211    3 KENIRLNLKAKSKEEAIEELAQLLVAAGYVEEEYIEALLEREKE-GSTGIG-NGIAIPHAKSEA-VKKPGIAVLRLKEPV 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 505181512  90 IFNHEDNDPVDILITMAAVDATTHQEVgIMQIVNLFDDEANFDRLRACRTEQEVLDLI 147
Cdd:cd00211   80 DFGSLDGQPVHLIFLLAAPDSNEHLKA-LSQLARLLSDEEFVEQLLNAQSKEEILALL 136
PTS_EIIA_2 pfam00359
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2;
9-148 4.75e-34

Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2;


Pssm-ID: 459780 [Multi-domain]  Cd Length: 139  Bit Score: 116.15  E-value: 4.75e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181512    9 QNHSIRLQAEAESWQEAVKIGVDLLVAADVVEPRYYQAILDGVAQHGPYFVIapGLAMPHGRPEeGVKKTGFALVTLKKP 88
Cdd:pfam00359   3 DKELIFLNLEAKSKEEAIEFLADKLVEAGYVEPAYLEAILEREKEGSTGIGN--GIAIPHARSE-AVKKPGIAVLTLKEP 79
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181512   89 LIFNHEDNDPVDILITMAAVDATTHQEVGIMQIVNLFDDEANFDRLRACRTEQEVLDLIE 148
Cdd:pfam00359  80 VDFGSEDGKPVKLIFLLAAPDNEASHLKILSQLARLLQDEEFVEKLLKAKDPEEILEILK 139
fruA TIGR00848
PTS system, fructose subfamily, IIA component; 4.A.2 The PTS Fructose-Mannitol (Fru) Family ...
63-128 4.54e-05

PTS system, fructose subfamily, IIA component; 4.A.2 The PTS Fructose-Mannitol (Fru) Family Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Fru family is a large and complex family which includes several sequenced fructose and mannitol-specific permeases as well as several putative PTS permeases of unknown specificities. The fructose permeases of this family phosphorylate fructose on the 1-position. Those of family 4.6 phosphorylate fructose on the 6-position. The Fru family PTS systems typically have 3 domains, IIA, IIB and IIC, which may be found as 1 or more proteins. The fructose and mannitol transporters form separate phylogenetic clusters in this family. This model is specific for the IIA domain of the fructose PTS transporters. Also similar to the Enzyme IIA Fru subunits of the PTS, but included in TIGR01419 rather than this model, is enzyme IIA Ntr (nitrogen), also called PtsN, found in E. coli and other organisms, which may play a solely regulatory role. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids, Signal transduction, PTS]


Pssm-ID: 273298 [Multi-domain]  Cd Length: 129  Bit Score: 40.72  E-value: 4.54e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 505181512   63 GLAMPHGRpEEGVKKTGFALVTLKKPLIFNHEDNDPVDILITMAAVDA---TTHQEVgIMQIVNLFDDE 128
Cdd:TIGR00848  57 GVAIPHAK-SAAVKQPFVAIARLVKGVDWQSLDGKPVKLIFLIAVPKDeagNTHLKA-LSQLARLLLND 123
 
Name Accession Description Interval E-value
PRK10372 PRK10372
PTS ascorbate transporter subunit IIA;
1-154 6.13e-117

PTS ascorbate transporter subunit IIA;


Pssm-ID: 182417 [Multi-domain]  Cd Length: 154  Bit Score: 326.55  E-value: 6.13e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181512   1 MKLHDSLAQNHSIRLQAEAESWQEAVKIGVDLLVAADVVEPRYYQAILDGVAQHGPYFVIAPGLAMPHGRPEEGVKKTGF 80
Cdd:PRK10372   1 MKLRDSLAENKSIRLQAEAETWQEAVKIGVDLLVAADVVEPRYYQAILDGVEQFGPYFVIAPGLAMPHGRPEEGVKKTGF 80
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 505181512  81 ALVTLKKPLIFNHEDNDPVDILITMAAVDATTHQEVGIMQIVNLFDDEANFDRLRACRTEQEVLDLIENATAAA 154
Cdd:PRK10372  81 ALVTLKKPLEFNHEDNDPVDILITMAAVDANTHQEVGIMQIVNLFEDEANFDRLRACRTEQEVLDLIDRTNAAA 154
PtsN COG1762
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) [Carbohydrate ...
1-150 8.46e-39

Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) [Carbohydrate transport and metabolism, Signal transduction mechanisms];


Pssm-ID: 441368 [Multi-domain]  Cd Length: 150  Bit Score: 128.82  E-value: 8.46e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181512   1 MKLHDSLAQNHsIRLQAEAESWQEAVKIGVDLLVAADVV--EPRYYQAILDGVAQHGPYfvIAPGLAMPHGRPEeGVKKT 78
Cdd:COG1762    1 MMLSDLLTPEL-ILLDLEASSKEEAIEELAELLAEKGYVldKEEYLEALLEREELGSTG--IGPGIAIPHARPE-GVKKP 76
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 505181512  79 GFALVTLKKPLIFNHEDNDPVDILITMAA--VDATTHQEVgIMQIVNLFDDEANFDRLRACRTEQEVLDLIENA 150
Cdd:COG1762   77 GIAVARLKEPVDFGAMDGEPVDLVFLLAApeDDSEEHLKL-LAELARLLSDEEFREKLLNAKSPEEILELLKEA 149
PTS_IIA_fru cd00211
PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: ...
10-147 3.05e-38

PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.


Pssm-ID: 238129 [Multi-domain]  Cd Length: 136  Bit Score: 126.91  E-value: 3.05e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181512  10 NHSIRLQAEAESWQEAVKIGVDLLVAADVVEPRYYQAILDGVAQhGPYFVIaPGLAMPHGRPEEgVKKTGFALVTLKKPL 89
Cdd:cd00211    3 KENIRLNLKAKSKEEAIEELAQLLVAAGYVEEEYIEALLEREKE-GSTGIG-NGIAIPHAKSEA-VKKPGIAVLRLKEPV 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 505181512  90 IFNHEDNDPVDILITMAAVDATTHQEVgIMQIVNLFDDEANFDRLRACRTEQEVLDLI 147
Cdd:cd00211   80 DFGSLDGQPVHLIFLLAAPDSNEHLKA-LSQLARLLSDEEFVEQLLNAQSKEEILALL 136
PTS_EIIA_2 pfam00359
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2;
9-148 4.75e-34

Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2;


Pssm-ID: 459780 [Multi-domain]  Cd Length: 139  Bit Score: 116.15  E-value: 4.75e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181512    9 QNHSIRLQAEAESWQEAVKIGVDLLVAADVVEPRYYQAILDGVAQHGPYFVIapGLAMPHGRPEeGVKKTGFALVTLKKP 88
Cdd:pfam00359   3 DKELIFLNLEAKSKEEAIEFLADKLVEAGYVEPAYLEAILEREKEGSTGIGN--GIAIPHARSE-AVKKPGIAVLTLKEP 79
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181512   89 LIFNHEDNDPVDILITMAAVDATTHQEVGIMQIVNLFDDEANFDRLRACRTEQEVLDLIE 148
Cdd:pfam00359  80 VDFGSEDGKPVKLIFLLAAPDNEASHLKILSQLARLLQDEEFVEKLLKAKDPEEILEILK 139
cmtB PRK09854
PTS mannitol transporter subunit IIA;
1-150 1.55e-31

PTS mannitol transporter subunit IIA;


Pssm-ID: 182114 [Multi-domain]  Cd Length: 147  Bit Score: 110.08  E-value: 1.55e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181512   1 MKLHDSLAQNhSIRLQAEAESWQEAVKIGVDLLVAADVVEPRYYQAILDGVAQHGPYFVIAPGLAMPHGRPEEGVKKTGF 80
Cdd:PRK09854   1 MRLSDYFPES-SISVIHSAKDWQEAIDFSMVSLLDKNYISENYIQAIKDSTINNGPYYILAPGVAMPHARPECGALKTGM 79
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 505181512  81 ALVTLKKPLIFNHEDnDPVDILITMAAVDATTHqeVGIMQIVN-LFDDEANFDRLRACRTEQEVLDLIENA 150
Cdd:PRK09854  80 SLTLLEQGVYFPGND-EPIKLLIGLSAADADSH--IGAIQALSeLLCEEEILEQLLTASSEKQLADIISRG 147
MtlA2 COG4668
Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and ...
12-150 5.69e-24

Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism];


Pssm-ID: 443705 [Multi-domain]  Cd Length: 143  Bit Score: 90.60  E-value: 5.69e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181512  12 SIRLQAEAESWQEAVKIGVDLLVAADVVEPRYYQAILDGVAQHGPYfvIAPGLAMPHGRPE--EGVKKTGFALVTLKKPL 89
Cdd:COG4668    8 NIRLNASAANKEEAIRLAGQLLVEAGYVEPEYIDAMLEREAQVSTY--LGNGIAIPHGTNEakDLVLKTGISVLQFPDGV 85
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 505181512  90 IFNheDNDPVDILITMAAVDaTTHQEVgIMQIVNLFDDEANFDRLRACRTEQEVLDLIENA 150
Cdd:COG4668   86 DWG--DGNTVYLVIGIAAKS-DEHLEI-LRQLARVLSDEENVEKLAKATDAEEILALLTGE 142
PRK15083 PRK15083
PTS system mannitol-specific transporter subunit IICBA; Provisional
2-152 7.17e-10

PTS system mannitol-specific transporter subunit IICBA; Provisional


Pssm-ID: 237905 [Multi-domain]  Cd Length: 639  Bit Score: 56.22  E-value: 7.17e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181512   2 KLHDSLA--QNHSIRLQAE-------AESWQEAVKIGVDLLVAADVVEPRYYQAILDGVAQHGPYfvIAPGLAMPHGRPE 72
Cdd:PRK15083 482 SLKDSFEdsSANLFKLGAEniflglkAATKEEAIRFAGEQLVKGGYVEPEYVDAMLDREKLTSTY--LGESIAVPHGTVE 559
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181512  73 --EGVKKTGFALVTLKKPLIFNHEDNDPVDILITMAAVDaTTHQEVgIMQIVNLFDDEANFDRLRACRTEQEVLDLIENA 150
Cdd:PRK15083 560 akDRVLKTGVVFCQYPEGVRFGEEEDDIARLVIGIAARN-NEHIQV-ITSLTNALDDESVIERLAHTTSVDEVLELLAGK 637

                 ..
gi 505181512 151 TA 152
Cdd:PRK15083 638 KA 639
PRK09765 PRK09765
PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional
13-151 1.25e-07

PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional


Pssm-ID: 182066 [Multi-domain]  Cd Length: 631  Bit Score: 49.73  E-value: 1.25e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181512  13 IRLQAEAESWQEAVKIGVDLLVAADVVEPR--YYQAILDGVAQhGPYfVIAPGLAMPHGRpEEGVKKTGFALVTLKKPLI 90
Cdd:PRK09765  12 LCLNARFTSREEAIHALAQRLAALGKISSTeqFLEEVYRRESL-GPT-ALGEGLAVPHGK-TAAVKEAAFAVATLSEPLQ 88
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 505181512  91 FNHED-NDPVDILITMAAVDA---TTHQEVgIMQIVNLFDDEANFDRLRACRTEQEVLDLIENAT 151
Cdd:PRK09765  89 WEGVDgPEAVDLIFLLAIPPNeagTTHMQL-LTALTTRLADDEIRARIQSATTPDELLSALDDKG 152
fruA TIGR00848
PTS system, fructose subfamily, IIA component; 4.A.2 The PTS Fructose-Mannitol (Fru) Family ...
63-128 4.54e-05

PTS system, fructose subfamily, IIA component; 4.A.2 The PTS Fructose-Mannitol (Fru) Family Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Fru family is a large and complex family which includes several sequenced fructose and mannitol-specific permeases as well as several putative PTS permeases of unknown specificities. The fructose permeases of this family phosphorylate fructose on the 1-position. Those of family 4.6 phosphorylate fructose on the 6-position. The Fru family PTS systems typically have 3 domains, IIA, IIB and IIC, which may be found as 1 or more proteins. The fructose and mannitol transporters form separate phylogenetic clusters in this family. This model is specific for the IIA domain of the fructose PTS transporters. Also similar to the Enzyme IIA Fru subunits of the PTS, but included in TIGR01419 rather than this model, is enzyme IIA Ntr (nitrogen), also called PtsN, found in E. coli and other organisms, which may play a solely regulatory role. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids, Signal transduction, PTS]


Pssm-ID: 273298 [Multi-domain]  Cd Length: 129  Bit Score: 40.72  E-value: 4.54e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 505181512   63 GLAMPHGRpEEGVKKTGFALVTLKKPLIFNHEDNDPVDILITMAAVDA---TTHQEVgIMQIVNLFDDE 128
Cdd:TIGR00848  57 GVAIPHAK-SAAVKQPFVAIARLVKGVDWQSLDGKPVKLIFLIAVPKDeagNTHLKA-LSQLARLLLND 123
nitro_reg_IIA TIGR01419
PTS IIA-like nitrogen-regulatory protein PtsN; This model describes a full-length protein of ...
63-149 9.08e-05

PTS IIA-like nitrogen-regulatory protein PtsN; This model describes a full-length protein of about 160 residues closely related to the fructose-specific phosphotransferase (PTS) system IIA component. It is a regulatory protein found only in species with a phosphoenolpyruvate-protein phosphotransferase (enzyme I of PTS systems) and an HPr-like phosphocarrier protein, but not all species have a IIC-like permease. Members of this family are found in Proteobacteria, Chlamydia, and the spirochete Treponema pallidum. [Signal transduction, PTS]


Pssm-ID: 162350 [Multi-domain]  Cd Length: 145  Bit Score: 40.09  E-value: 9.08e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181512   63 GLAMPHGRPEEGVKKTGfALVTLKKPLIFNHEDNDPVDILITMAAVDATTHQEVGIM-QIVNLFDDEANFDRLRAcRTEQ 141
Cdd:TIGR01419  60 GIAIPHGRLSGLKQPVG-VFIRLDAPVDFDALDGKPVDLLFALLVPENATAEHLEALsRIARKLSDKTICRRLRA-ASAE 137

                  ....*...
gi 505181512  142 EVLDLIEN 149
Cdd:TIGR01419 138 EIYQILTD 145
PRK10896 PRK10896
PTS IIA-like nitrogen regulatory protein PtsN;
60-147 1.30e-04

PTS IIA-like nitrogen regulatory protein PtsN;


Pssm-ID: 182818 [Multi-domain]  Cd Length: 154  Bit Score: 39.74  E-value: 1.30e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181512  60 IAPGLAMPHGRPEEGVKKTGFALVTLKKPLIFNHEDNDPVDILITM--AAVDATTHQEVgIMQIVNLFDDEANFDRLRAC 137
Cdd:PRK10896  64 IGNGIAIPHGKLEEDTLRAVGVFVQLEQPIAFDAIDNQPVDLLFALlvPADQCKTHLHT-LSLVAKRLADKTICRRLRAA 142
                         90
                 ....*....|
gi 505181512 138 RTEQEVLDLI 147
Cdd:PRK10896 143 QSDEELYQII 152
PRK13779 PRK13779
bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein; Provisional
12-82 3.95e-03

bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein; Provisional


Pssm-ID: 237502 [Multi-domain]  Cd Length: 503  Bit Score: 36.39  E-value: 3.95e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 505181512  12 SIRLQAEAESWQEAVKIGVDLLVAADVVEPRYYQAILdGVAQHGPYFvIAPGLAMPHGRPEEG--VKKTGFAL 82
Cdd:PRK13779   8 NIHLNAQAINKQQAIEMAAAALEQAGNVENGYLQGML-ARELQTSTF-LGNGIAIPHGTLDTRhmVKNTGVQI 78
PRK11109 PRK11109
fused PTS fructose transporter subunit IIA/HPr protein;
11-154 3.98e-03

fused PTS fructose transporter subunit IIA/HPr protein;


Pssm-ID: 236849 [Multi-domain]  Cd Length: 375  Bit Score: 36.46  E-value: 3.98e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505181512  11 HSIRLQAEAESWQEAVKIGVDLLVAADVVEPRYYQAILDGVAQHGPYfvIAPGLAMPHGRPE--EGVKKTGFALvtLKKP 88
Cdd:PRK11109   7 QDIHLGQQAGNKEEAIRQVAAALTQAGNVAEGYVDGMLAREQQTSTF--LGNGIAIPHGTTDtrDLVLKTGVQV--FQFP 82
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 505181512  89 LIFNHEDNDPVDILITMAavdATTHQEVGIM-QIVNLFDDEANFDRLRACRTEQEVLDLIENATAAA 154
Cdd:PRK11109  83 QGVTWGDGQTAYVAIGIA---AKSDEHLGLLrQLTHVLSDDSVAEQLKSATTAEELRALLMGEKQSE 146
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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