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Conserved domains on  [gi|505244445|ref|WP_015431547|]
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tetracycline efflux MFS transporter Tet(H) [Bibersteinia trehalosi]

Protein Classification

TCR/Tet family MFS transporter( domain architecture ID 13024400)

TCR/Tet family major facilitator superfamily (MFS) transporter functions as a metal-tetracycline/H(+) antiporter that confers tetracycline resistance (TCR) by an active tetracycline efflux

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_TetA cd17388
Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily ...
12-388 2.26e-179

Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340946 [Multi-domain]  Cd Length: 385  Bit Score: 504.09  E-value: 2.26e-179
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  12 TVLDAIGIGLIMPVLPTLLNEFV-SENSLATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAF 90
Cdd:cd17388    8 VLLDAMGIGLIMPVLPTLLREFVgDSADAATHYGVLLALYALMQFIFAPILGALSDRFGRRPVLLLSLAGAALDYLLMAF 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  91 STTLWMLYIGRIIAGITGATGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSI 170
Cdd:cd17388   88 APTLWWLYLGRIIAGITGATGAVAAAYIADVTPPEQRARNFGLLGAAFGLGFIAGPALGGLLGEISPRAPFLVAAGLNGL 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 171 LLILSLLFFRETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMS 250
Cdd:cd17388  168 NFLLGLFVLPESLPPERRRAFRWRRANPFGSLRWLTGFPGLLGLLAVFFLIQLIGQVPATTWVLFTEDRFDWSPTMVGLS 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 251 LAVLGVLHIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAGGMGQPALQGYLSKSVDDN 330
Cdd:cd17388  248 LAVFGLLHALFQAFVTGPIAKRLGEKRAILLGLAADALGFLLLAFATQGWMVFPILILLALGGIAGPALQGLLSRQVPEN 327
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 505244445 331 AQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLLWLMGAILYAMLLITAYFHQ 388
Cdd:cd17388  328 EQGELQGVLTSLTSLTSIIGPLLFTGIFAASPATWPGLAWIIGAALYLICLVLAYRFF 385
 
Name Accession Description Interval E-value
MFS_TetA cd17388
Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily ...
12-388 2.26e-179

Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340946 [Multi-domain]  Cd Length: 385  Bit Score: 504.09  E-value: 2.26e-179
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  12 TVLDAIGIGLIMPVLPTLLNEFV-SENSLATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAF 90
Cdd:cd17388    8 VLLDAMGIGLIMPVLPTLLREFVgDSADAATHYGVLLALYALMQFIFAPILGALSDRFGRRPVLLLSLAGAALDYLLMAF 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  91 STTLWMLYIGRIIAGITGATGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSI 170
Cdd:cd17388   88 APTLWWLYLGRIIAGITGATGAVAAAYIADVTPPEQRARNFGLLGAAFGLGFIAGPALGGLLGEISPRAPFLVAAGLNGL 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 171 LLILSLLFFRETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMS 250
Cdd:cd17388  168 NFLLGLFVLPESLPPERRRAFRWRRANPFGSLRWLTGFPGLLGLLAVFFLIQLIGQVPATTWVLFTEDRFDWSPTMVGLS 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 251 LAVLGVLHIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAGGMGQPALQGYLSKSVDDN 330
Cdd:cd17388  248 LAVFGLLHALFQAFVTGPIAKRLGEKRAILLGLAADALGFLLLAFATQGWMVFPILILLALGGIAGPALQGLLSRQVPEN 327
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 505244445 331 AQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLLWLMGAILYAMLLITAYFHQ 388
Cdd:cd17388  328 EQGELQGVLTSLTSLTSIIGPLLFTGIFAASPATWPGLAWIIGAALYLICLVLAYRFF 385
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
12-347 3.83e-38

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 140.49  E-value: 3.83e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  12 TVLDAIGIGLIMPVLPTLLNEFVSENSLAthyGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFS 91
Cdd:COG2814   19 AFLSGLGIGIVLPALPLIAADLGASPAQA---GLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLCALA 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  92 TTLWMLYIGRIIAGITGATGAACASAM-SDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGD-ISAHMPFIFAAISHS 169
Cdd:COG2814   96 PSLWLLLAARFLQGLGAGALFPAALALiADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLADlFGWRWVFLVNAVLAL 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 170 ILLILSLLFFRETQKREAlvanrtpeNQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGM 249
Cdd:COG2814  176 LALLLLLRLLPESRPAAR--------ARLRGSLRELLRRPRLLLLLLLAFLLGFGFFALFTYLPLYLQEVLGLSASAAGL 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 250 SLAVLGVLHIFFQaIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAG-GMGQPALQGYLSKSVD 328
Cdd:COG2814  248 LLALFGLGGVLGA-LLAGRLADRFGRRRLLLIGLLLLALGLLLLALAGSLWLLLLALFLLGFGfGLLFPLLQALVAELAP 326
                        330
                 ....*....|....*....
gi 505244445 329 DNAQGKLQGTLVSLTNITG 347
Cdd:COG2814  327 PEARGRASGLYNSAFFLGG 345
MFS_1 pfam07690
Major Facilitator Superfamily;
12-351 3.68e-29

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 115.98  E-value: 3.68e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445   12 TVLDAIGIGLIMPVLPTLLNEfvSENSLATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFS 91
Cdd:pfam07690   5 AFLAALGRSLLGPALPLLLAE--DLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFA 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445   92 TTLWMLYIGRIIAGITGATGAACASAM-SDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDiSAHMPFIFAAISHSI 170
Cdd:pfam07690  83 SSLWLLLVLRVLQGLGAGALFPAALALiADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLAS-LFGWRAAFLILAILS 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  171 LLILSLLFFRETQKREALVANRTPENQTASNTVTVFFKKSlYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMS 250
Cdd:pfam07690 162 LLAAVLLLLPRPPPESKRPKPAEEARLSLIVAWKALLRDP-VLWLLLALLLFGFAFFGLLTYLPLYQEVLGLSALLAGLL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  251 LAVLGVLhIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGH----VWVILPALICLAAGGMGQPALQGYLSKS 326
Cdd:pfam07690 241 LGLGGLL-GAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLLSLtlssLWLLLALLLLGFGFGLVFPALNALVSDL 319
                         330       340
                  ....*....|....*....|....*
gi 505244445  327 VDDNAQGKLQGTLVSLTNITGIIGP 351
Cdd:pfam07690 320 APKEERGTASGLYNTAGSLGGALGP 344
efflux_Bcr_CflA TIGR00710
drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a ...
13-297 2.57e-13

drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.


Pssm-ID: 273229 [Multi-domain]  Cd Length: 385  Bit Score: 70.88  E-value: 2.57e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445   13 VLDAIGIGLIMPVLPTLLNEFVSENSLATHygvLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFST 92
Cdd:TIGR00710  15 ILGPLGIDMYLPAFPEIAADLSTPASIVQM---TLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSN 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445   93 TLWMLYIGRIIAGITGATGAACASAM-SDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGD-ISAHMPFIFAAISHSI 170
Cdd:TIGR00710  92 NIETLLVLRFVQAFGASAGSVISQALvRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVwLSWHAIFAFLSLAGIL 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  171 LLILSLLFFRETQKREalvaNRTPENQTASNTVTVFFKKS--LYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIg 248
Cdd:TIGR00710 172 LSALIFFILPETLPYE----ARIQISTYFETFLLLLKSKMfwGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGL- 246
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 505244445  249 msLAVLGVLHIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIG 297
Cdd:TIGR00710 247 --LFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITA 293
PRK09874 PRK09874
multidrug efflux MFS transporter MdtG;
14-357 4.96e-12

multidrug efflux MFS transporter MdtG;


Pssm-ID: 182127 [Multi-domain]  Cd Length: 408  Bit Score: 66.87  E-value: 4.96e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  14 LDAIGIGLIMPVLPTLLNEF--VSENSLATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFS 91
Cdd:PRK09874  25 LTGAAFSLVMPFLPLYVEQLgvTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLA 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  92 TTLWMLYIGRIIAGITGATGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSIL 171
Cdd:PRK09874 105 QNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFL 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 172 LILSLLFFretqKREALVANRTPENQTASNTVTVFFKKSLYFWL-ATYFIIQLIGQIPATIWVLFTQyRFDWNTTSI--- 247
Cdd:PRK09874 185 CFLVTLFC----IRENFQPVSKKEMLHMREVVTSLKNPKLVLSLfVTTLIIQVATGSIAPILTLYVR-ELAGNVSNIafi 259
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 248 -GMSLAVLGVLHIfFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVI-LPALICLAAGGMGQPALQGYLSK 325
Cdd:PRK09874 260 sGMIASVPGVAAL-LSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLgILRFLLGAADGALLPAVQTLLVY 338
                        330       340       350
                 ....*....|....*....|....*....|..
gi 505244445 326 SVDDNAQGKLQGTLVSLTNITGIIGPLLFAFI 357
Cdd:PRK09874 339 NSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAI 370
 
Name Accession Description Interval E-value
MFS_TetA cd17388
Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily ...
12-388 2.26e-179

Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340946 [Multi-domain]  Cd Length: 385  Bit Score: 504.09  E-value: 2.26e-179
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  12 TVLDAIGIGLIMPVLPTLLNEFV-SENSLATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAF 90
Cdd:cd17388    8 VLLDAMGIGLIMPVLPTLLREFVgDSADAATHYGVLLALYALMQFIFAPILGALSDRFGRRPVLLLSLAGAALDYLLMAF 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  91 STTLWMLYIGRIIAGITGATGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSI 170
Cdd:cd17388   88 APTLWWLYLGRIIAGITGATGAVAAAYIADVTPPEQRARNFGLLGAAFGLGFIAGPALGGLLGEISPRAPFLVAAGLNGL 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 171 LLILSLLFFRETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMS 250
Cdd:cd17388  168 NFLLGLFVLPESLPPERRRAFRWRRANPFGSLRWLTGFPGLLGLLAVFFLIQLIGQVPATTWVLFTEDRFDWSPTMVGLS 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 251 LAVLGVLHIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAGGMGQPALQGYLSKSVDDN 330
Cdd:cd17388  248 LAVFGLLHALFQAFVTGPIAKRLGEKRAILLGLAADALGFLLLAFATQGWMVFPILILLALGGIAGPALQGLLSRQVPEN 327
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 505244445 331 AQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLLWLMGAILYAMLLITAYFHQ 388
Cdd:cd17388  328 EQGELQGVLTSLTSLTSIIGPLLFTGIFAASPATWPGLAWIIGAALYLICLVLAYRFF 385
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
13-386 2.62e-67

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 217.06  E-value: 2.62e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  13 VLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFST 92
Cdd:cd17330    6 FLDALGFGIVFPVLPFYVREFNKLGASGYYVGLLQSSYSLGQFLASPLWGRLSDRYGRKPVLLLSLAGSAVSYVLLGLSR 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  93 TLWMLYIGRIIAGITGATGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLG-DISAHMPFIFAAISHsil 171
Cdd:cd17330   86 NLWLLFLARFLDGLTGGNVSVAQAYIADITDEEERAKAFGIISAAFGLGFILGPALGGFLStPYGYALPFLVAAALA--- 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 172 lilsllffretqkrealvanrtpenqTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMSL 251
Cdd:cd17330  163 --------------------------LLNLVLVLFFLPPLRRLLLVYFLIALAFAGLESVFSLFLKDRFGFSPSQIGLLL 216
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 252 AVLGVLHIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAG-GMGQPALQGYLSKSVDDN 330
Cdd:cd17330  217 ALVGIAGILAQLLLIPRLAKRLGERKLLRLGLLLAIIGLLLLPFASSVPLLVLAAAILAFGtGIVFPALSALLSKSVPSK 296
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 505244445 331 AQGKLQGTLVSLTNITGIIGPLLFAFIYSYsvaYWDGLLWLMGAILYAMLLITAYF 386
Cdd:cd17330  297 EQGKAQGIIQSLQSLARIIGPLLAGPLYSF---LGPGVPFLLAAGLLLIALFLLSL 349
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
14-381 9.97e-46

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 161.20  E-value: 9.97e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  14 LDAIGIGLIMPVLPTLLNEFVSENSLAthyGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTT 93
Cdd:cd17325    7 LDMLGYGIIIPILPLYAESLGASVAQI---GLIVAAYALAQLLFSPPAGRLSDRFGRKRLLLLGLLLLAVSTLLFAFATS 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  94 LWMLYIGRIIAGI-TGATGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISA-HMPFIFAAISHSIL 171
Cdd:cd17325   84 YWQLLLARFLQGLaSAAVWPAAMALIADIAPPEERGRAMGIFSSAIGLGFLIGPLLGGLLADALGyRAPFLVCAALALLA 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 172 LILSLLFFRETQKREALVANRTPENQTASNtvTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMSL 251
Cdd:cd17325  164 LVLALLLLPEPRPPPNKRAVSAARLRSGLR--LLLRDRRLLALFLAIFVLAFAFGALEPFLPLYAAELGGLSPAQIGLLF 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 252 AVLGVLHIFFQaIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAG-GMGQPALQGYLSKSVDDN 330
Cdd:cd17325  242 GAQGLASALSQ-PPAGKLSDRIGRKPLILIGLLLSAVALLLLPLATSFWLLLLLLALLGLGlGLVFPATLALLADIVPPE 320
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 505244445 331 AQGKLQGTLVSLTNITGIIGPLLFAFIYS----YSVAYWDGLLWLMGAILYAMLL 381
Cdd:cd17325  321 GRGTAMGLFNTAFSLGMVLGPLLGGFLYDafgfATPFLAAAALLLLAAVLFLLLR 375
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
12-347 3.83e-38

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 140.49  E-value: 3.83e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  12 TVLDAIGIGLIMPVLPTLLNEFVSENSLAthyGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFS 91
Cdd:COG2814   19 AFLSGLGIGIVLPALPLIAADLGASPAQA---GLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLCALA 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  92 TTLWMLYIGRIIAGITGATGAACASAM-SDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGD-ISAHMPFIFAAISHS 169
Cdd:COG2814   96 PSLWLLLAARFLQGLGAGALFPAALALiADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLADlFGWRWVFLVNAVLAL 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 170 ILLILSLLFFRETQKREAlvanrtpeNQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGM 249
Cdd:COG2814  176 LALLLLLRLLPESRPAAR--------ARLRGSLRELLRRPRLLLLLLLAFLLGFGFFALFTYLPLYLQEVLGLSASAAGL 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 250 SLAVLGVLHIFFQaIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAG-GMGQPALQGYLSKSVD 328
Cdd:COG2814  248 LLALFGLGGVLGA-LLAGRLADRFGRRRLLLIGLLLLALGLLLLALAGSLWLLLLALFLLGFGfGLLFPLLQALVAELAP 326
                        330
                 ....*....|....*....
gi 505244445 329 DNAQGKLQGTLVSLTNITG 347
Cdd:COG2814  327 PEARGRASGLYNSAFFLGG 345
MFS_MFSD9 cd17390
Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily ...
14-364 1.40e-34

Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily domain-containing protein 9 (MFSD9) is expressed in the central nervous system (CNS) and in most peripheral tissues but at very low expression levels. The function of MFSD9 is unknown. MFSD9 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340948 [Multi-domain]  Cd Length: 350  Bit Score: 130.81  E-value: 1.40e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  14 LDAIGIGLIMPVLPTLLNEFVSENSLAthyGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTT 93
Cdd:cd17390    7 LDLFGVSMILPLLSTHIRSLGASPTVI---GLIGSVYGALQLFSSPLVGSWSDVVGRRPVLLICLLLTALGYVLLGFSTS 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  94 LWMLYIGRIIAGITGATGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISAH--MPFIFAAishsil 171
Cdd:cd17390   84 LALLFLSRIPLGIFKHTQSLCKAYLSDLVSEQERSRVLGRFNAASSLGFILGPVVGGHLAETDGGfyYVALLCS------ 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 172 lilsLLFFretqkrealvanrtpenqtaSNTVTV-FFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMS 250
Cdd:cd17390  158 ----AIFI--------------------LNAGLVwFLLSKLWDLLLVRFLMGFSVLLFRSNFSLYLEERFDLSPKTIGYL 213
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 251 LAVLGVLHiFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIG--HVWVILPALICLA-AGGMGQPALQGYLSKSV 327
Cdd:cd17390  214 ISYSGVLG-ALSGFLVGRILKLYKNNEYLLLLHSFILLALSLLGLALapSIWLLVLCLTPLSiSSAVLRTCSTSLLLSRG 292
                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 505244445 328 DDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAY 364
Cdd:cd17390  293 KSKERGTLLGVGQSVTSLARILAPLLSGLLQEFSVSG 329
MFS_SLC22A18 cd17331
Solute carrier family 22 member 18 of the Major Facilitator Superfamily of transporters; ...
12-382 4.20e-34

Solute carrier family 22 member 18 of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 18 (SLC22A18) is also called Beckwith-Wiedemann syndrome chromosomal region 1 candidate gene A protein (BWR1A or BWSCR1A), efflux transporter-like protein, imprinted multi-membrane-spanning polyspecific transporter-related protein 1 (IMPT1), organic cation transporter-like protein 2 (ORCTL2), or tumor-suppressing subchromosomal transferable fragment candidate gene 5 protein (TSSC5). It is localized at the apical membrane surface of renal proximal tubules and may act as an organic cation/proton antiporter. It functions as a tumor suppressor in several cancer types including glioblastoma and colorectal cancer. SLC22A18 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340889 [Multi-domain]  Cd Length: 382  Bit Score: 130.42  E-value: 4.20e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  12 TVLDAIGIGLIMPVLPTLLNEFVSENSlatHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFS 91
Cdd:cd17331    9 IVLYATCYWLQQPVLPYLTKKLGVDSV---VFGYLQTTFSVLQLVGGPLFGRFGDLFGPRAALVLSFLSSALSYLLLAFA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  92 TTLWMLYIGRIIAGITGATGAAcASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGD-ISAHMPFIFAAISHSI 170
Cdd:cd17331   86 SSVPMLFLSRLPSVFMHAMQAA-QMVVTDLTDPGERAAALGRLGLSYGIGMVVGSFLGGLLTKkFGEQAAALVAAVGSLL 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 171 LLILSLLFFRETQKREalvanRTPENQTASNTVTVFFKKSLYFWL-----ATYFIIQLIGQIPATIW-VLFTQY---RFD 241
Cdd:cd17331  165 SIVLVILLIPSNTKSK-----REKEAKESASPPSVFNLKEILRLLrlpgvAFLLLVKLLSGLPIGMFqSMFSLVamdFFG 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 242 WNTTSIGMSLAVLGVLHIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAGGMGQ-PALQ 320
Cdd:cd17331  240 LTPEENGYLMSYAGVLGMVVQGLLVGPLTKRFGERSLLKLSVALLAIGYLLLAFVTTVWQLLVLLLPLVIGGSVLyTVIT 319
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 505244445 321 GYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYsvaYWDGLLWLMGAILYAMLLI 382
Cdd:cd17331  320 SLLTKAVPPEDTGTALGLSHALFSLVRTVSPTIGGALLQA---YGFPSFGLLGAAINGLLTV 378
MFS_1 pfam07690
Major Facilitator Superfamily;
12-351 3.68e-29

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 115.98  E-value: 3.68e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445   12 TVLDAIGIGLIMPVLPTLLNEfvSENSLATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFS 91
Cdd:pfam07690   5 AFLAALGRSLLGPALPLLLAE--DLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFA 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445   92 TTLWMLYIGRIIAGITGATGAACASAM-SDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDiSAHMPFIFAAISHSI 170
Cdd:pfam07690  83 SSLWLLLVLRVLQGLGAGALFPAALALiADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLAS-LFGWRAAFLILAILS 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  171 LLILSLLFFRETQKREALVANRTPENQTASNTVTVFFKKSlYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMS 250
Cdd:pfam07690 162 LLAAVLLLLPRPPPESKRPKPAEEARLSLIVAWKALLRDP-VLWLLLALLLFGFAFFGLLTYLPLYQEVLGLSALLAGLL 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  251 LAVLGVLhIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGH----VWVILPALICLAAGGMGQPALQGYLSKS 326
Cdd:pfam07690 241 LGLGGLL-GAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLLSLtlssLWLLLALLLLGFGFGLVFPALNALVSDL 319
                         330       340
                  ....*....|....*....|....*
gi 505244445  327 VDDNAQGKLQGTLVSLTNITGIIGP 351
Cdd:pfam07690 320 APKEERGTASGLYNTAGSLGGALGP 344
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
17-381 8.17e-29

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 115.75  E-value: 8.17e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  17 IGIGLIMPVLPTLLNEFVSENSLAThyGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWM 96
Cdd:cd17473   13 MAGAAIAPALPAIAQHFVPNSELLV--PLLLTLPALFIALFAPLAGWLADRFGRKRLLIAGLLLYGIGGVAGLFLDSLYA 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  97 LYIGRIIAGI-TGATGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISAHMPFIFAAiSHSILLILS 175
Cdd:cd17473   91 LLASRALLGIgVAGIMTLATALIGDYFEGEERAKMLGLQSAAMSLGGVVFLLLGGALAEIGWRAPFLVYL-LALPVLILV 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 176 LLFFRETQKRealvanRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMSLAVLG 255
Cdd:cd17473  170 LLFLPEPARK------SKSAASPGAATAAALPWKRVLPIYFLAFLAMLLFYVIPIQLPFLLQERGGGSAALIGLALAIAS 243
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 256 VLhIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAG-GMGQPALQGYLSKSVDDNAQGK 334
Cdd:cd17473  244 LA-GAIGALLFGRLKRRLGKRRLLAIGFALMALGFLLLALASGLWVVLLGAILAGLGfGLLLPTLNSWAMSLVPPELRGR 322
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 505244445 335 LQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLLWLMGAILYAMLL 381
Cdd:cd17473  323 AMGIVTSAFFLGQFLSPLVLGPLVNLTGGLSGAFLILGVLALVLAIV 369
MFS_MdtG_MDR_like cd17391
Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the ...
16-381 1.79e-27

Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340949 [Multi-domain]  Cd Length: 380  Bit Score: 111.97  E-value: 1.79e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  16 AIGIGLIMPVLPTLLNEF--VSENSLATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTT 93
Cdd:cd17391    9 GIGFSLIAPFLPLYIEQLgvTSGGLVELWSGLAFSSTFLVSAIFSPIWGRLADRYGRKPMLLRASLGMAIVIGLMAFVTN 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  94 LWMLYIGRIIAGITGATGAACASAMSDVTPaKNRTRY-FGFLSGAFGVGLIIGPMLGGLLGDISAHMP-FIFAAISHSIL 171
Cdd:cd17391   89 VWQLLILRLLQGVFSGYVPNATALIASQTP-KEKSGWaLGTLSTGVVAGTLIGPLLGGFLADLFGIRNvFFITGGLLFLA 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 172 LILSLLFFRETQKREalvaNRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQ--YRFDWNTTSI-G 248
Cdd:cd17391  168 FLLTLFFVKEDFKPV----EKKKMVSTKEVWNSVPNPSLLISLFVTTFIIQLANQSIEPILTLYIRqlMGDASNLAFIsG 243
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 249 MSLAVLGVLHIFFqAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVW--VILPALICLAAGGMgQPALQGYLSKS 326
Cdd:cd17391  244 LVFSATGVSSLLS-APRLGKLGDRIGHHRILLGALLASALLYIPQAFVQTPWqlGILRFLLGLATGGL-LPAINSLLAKI 321
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 505244445 327 VDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSY----SVAYWDGLLWLMGAILYAMLL 381
Cdd:cd17391  322 TPKEVAGRIFGYNQSFQYLGNVAGPLLGSAIAAHfgyrAVFVVTALLVLLNAIWSFIFL 380
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
12-384 2.14e-27

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 111.51  E-value: 2.14e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  12 TVLDAIGIGLIMPVLPTLLNEF-VSENSLathyGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAF 90
Cdd:cd17474    8 TLLAVLGVSIVDPILPAIAEALgASPAQV----GLLITAFTLPAAVLMPVAGVLADRFGRKKVLLPGLLLFGIGGLLCGL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  91 STTLWMLYIGRIIAGITGATGAACASAM-SDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHS 169
Cdd:cd17474   84 SDSFALLLAGRALQGIGAAGLGPLALTLiGDLFEGGERAKAMGLYEAALGLGIAVGPLLGGLLAAISWRYPFFLLAALIP 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 170 ILLILSLLFFRETqkrealvanRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGqipatIWVLFT---------QYRF 240
Cdd:cd17474  164 VAFLAILFLLPEP---------KEKAKSSSATKLRDLKKALRGRGLLTFLVSAFLY-----FFLYFAfltylpfllELLY 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 241 DWNTTSIGMSLAVLGVLHIFFQAIVAGKLAQKWGEKTTIMISMSIdMMGCLLLAWIGH--VWVILPALICLAAGGMGQPA 318
Cdd:cd17474  230 GISPIIIGLLFAGWSVLLALGSLFVGRLLKKRFGARRILVIGLLL-YALSLLLLGFVPslALLLIAIVLFGLGLGLNLPL 308
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 505244445 319 LQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVayWDGLLWLMGAILYAMLLITA 384
Cdd:cd17474  309 LTTLVTELAPEEERGTASSLYNFVRFLGQAVGPLLFGLLLEIFG--LSAPFLVGAAIALAAAVLLA 372
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
12-376 4.07e-27

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 110.78  E-value: 4.07e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  12 TVLDAIGIGLIMPVLPTLLNEFVSENSLAThyGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFS 91
Cdd:cd17329    8 SFLNRLGFFMVWPFMAIYLHQQLGLSASIV--GLVLALSAVAGIVASLIGGRLADRFGRKPVMLAGLLLRALGFALLGFA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  92 TTLWMLYIGRIIAGITGATGAACASAM-SDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSI 170
Cdd:cd17329   86 HSPWLFAIALVLTGFGGGLFEPASEAMiADVTTPENRTRAFSLLYWAINLGVAIGPLLGGLLLLYSFRLLFLAAAVLFLL 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 171 LLILSLLFFRETQKREalvANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDwNTTSIGMS 250
Cdd:cd17329  166 AALVLLFLLPETRPKR---RAAEKTEILRGYKIVLRDRAFLLFLLASFLISLIYFQLESTLPVYVVEILGL-GESLLGLL 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 251 LAVLGVLHIFFQAIVAgKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAGGM-GQPALQGYLSKSVDD 329
Cdd:cd17329  242 LALNALLIVLLQFPVA-RLVERFRLRKILMIGILLFAIGFAVLAFANTLAVLILAMIVLTLGEMlVFPAVQTLVAALAPP 320
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 505244445 330 NAQGKLQGTLVSLTNITGIIGPLLFAFIYSYsvaYWDGLLWLMGAIL 376
Cdd:cd17329  321 DKRGSYMGFYALAWGLGRAIGPLVGGLLLDL---LGPGLPWLILAAL 364
MFS_MFSD10 cd17389
Major facilitator superfamily domain-containing protein 10; Major facilitator superfamily ...
13-374 1.39e-26

Major facilitator superfamily domain-containing protein 10; Major facilitator superfamily domain-containing protein 10 (MFSD10) is also called tetracycline transporter-like protein (TETRAN). It is expressed in various human tissues, including the kidney. In cultured cells, its overexpression facilitated the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs). MFSD10/TETRAN overexpression cause resistance to some NSAIDs, suggesting that it may be an organic anion transporter that serves as an efflux pump for some NSAIDs and various other organic anions at the final excretion step. MFSD10 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340947 [Multi-domain]  Cd Length: 391  Bit Score: 109.67  E-value: 1.39e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  13 VLDAIGIGLIMPVLPTLLNEFVSEN-----SLATHY----------------------GVLLTLYATMQVIFAPILGRLS 65
Cdd:cd17389    9 LLDLLAFTIILPLFPSLLDYYGQNDdsglySLQISSvdwfrdaigapderrynsvlfgGLIGSLFSLLQFLSSPITGAAS 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  66 DKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIG 145
Cdd:cd17389   89 DVYGRKPVLLLTMIGLAISYALWAVSRSFTIFLLSRIVGGISKGNVSLSTAIVADVTSPKKRSKGMALIGVAFSLGFIIG 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 146 PMLGGLL-------GDISAHMPFIFAAISHSILLILSLLFFRETQKREALVANRtpenqtaSNTVTVFFKKSLYFWLaty 218
Cdd:cd17389  169 PMIGAYFasftrslGEVFFSMPALFALVLALADLLFIFFFLPETLPSNLRRLGL-------VYFLYLFLFSGLEFTL--- 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 219 fiiqligqipatiwVLFTQYRFDWNTTSIGMSLAVLGVLHIFFQAIVAGKLAQKwGEKTTIMISMSIDMMGCLLLAWIGH 298
Cdd:cd17389  239 --------------TFLTHQRFQYTSMQQGKMFFFIGIIMALVQGGYVRRIKPG-KEKKAVLQGLILLIPAFLLIGWASS 303
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 505244445 299 VWVILPALICLA-AGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYsysvaywdgllWLMGA 374
Cdd:cd17389  304 VTVLYAGLFLYSfAAATVVPCLTTLVSGYGSDDQKGTVMGIFRSLGALARALGPIVACTVY-----------WLAGS 369
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
13-385 1.83e-26

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 109.05  E-value: 1.83e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  13 VLDAIGIGLIMPVLPTLLNEFVSENSLAthyGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFST 92
Cdd:cd06174    6 FLTGLARGLISPLLPALLQSFGLSASQL---GLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAFAP 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  93 TLWMLYIGRIIAGITGA-TGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISA---HMPFIFAAISH 168
Cdd:cd06174   83 SFWLLLLGRFLLGLGSGlIDPAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGILASSLGfgwRAVFLIAAALA 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 169 SILLILSLLFFRETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIG 248
Cdd:cd06174  163 LLAAILLLLVVPDPPESARAKNEEASSKSVLKLLKRVLKNPGLWLLLLAIFLVNLAYYSFSTLLPLFLLDLGGLSVAVAG 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 249 MSLAVLGVLHIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAGGMG-QPALQGYLSKSV 327
Cdd:cd06174  243 LLLSLFGLAGALGSLLLGLLSDRLIGRKPLLLIGLLLMALGLALLLLAPSLLLLLLLLLLLGFGLGGlLPLSFALIAELF 322
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 505244445 328 DDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYwdGLLWLMGAILYAMLLITAY 385
Cdd:cd06174  323 PPEIRGTAFGLLNTFGFLGGAIGPLLAGFLLAATFGL--TGAFLVLAVLLLLAAILLL 378
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
12-388 7.98e-25

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 104.21  E-value: 7.98e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  12 TVLDAIGIGLIMPVLPTLLNEFVSENSLAthyGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFS 91
Cdd:cd17489    5 NFFFFLSFYLLLPVLPLYAHDLGGSEAVA---GLVVGLFTLAALLARPFAGRLLDRFGRKRLLLIGLLIFALATLLYLLA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  92 TTLWMLYIGRIIAGI-TGATGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISAHmPFIFAAISHSI 170
Cdd:cd17489   82 TSVALLLVLRLIHGIgWGAFTTAAATLVADIIPPSRRGEGIGYYGLATTLAMALGPALGLFLYQHLGF-AVLFIVAAVLA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 171 LLILSLLFFRETQKREAlvanrTPENQTASNTVTVFFKKSLyfwLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMS 250
Cdd:cd17489  161 LLALLLVFLVKDPPPVA-----AEEAEAGTRAFRRLVEKKV---LPPALILFLASIAYGAISTFLPLYAAERGISNAGLF 232
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 251 LAVLGVLhIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAG-GMGQPALQGYLSKSVDD 329
Cdd:cd17489  233 FTVYAIA-LLLSRPFSGKLSDRKGPKTVIIPGLLLLALGLLLLSFAGSPWMLLLAAVLYGLGfGLLFPALQALAVDLVPP 311
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 505244445 330 NAQGKLQGTLVSLTNITGIIGPLLFAFI---YSYSVAYwdgllwLMGAILYAMLLITAYFHQ 388
Cdd:cd17489  312 HRRGAANGTFFIFFDLGIGLGGLLLGLVaelFGYRAMF------LLAAVVVLLALVLYIFLL 367
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
21-384 1.68e-22

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 97.62  E-value: 1.68e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  21 LIMPVLPTLLNEFVSENSLAthyGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIG 100
Cdd:cd17324   17 VIQGLLPDIARDFGVSVAQA---GLLVSAYALGYALGALLLGPLSDRIERRRLLLVLLLLFILGNLLAALAPSFALLLLA 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 101 RIIAGITGATGAACASAM-SDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGD-ISAHMPFIFAAISHSILLILSLLF 178
Cdd:cd17324   94 RALAGLAHGGFWAIAAAYaADLVPPEKRGRAIGLVFSGLTLGLVLGRPLGGLLGQlLGWRAAFLAIAVLALLAALLLWRL 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 179 FRETQKREAlvanrtPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMSLAVLGVLH 258
Cdd:cd17324  174 LPSLPPKKP------GSLGLLSSLLLLLRNPRLRLAYLITFLLFGGFFALYTYLAPFLTDVPGFSSSAIIGLLLLFGVAG 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 259 IFFqAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAG-GMGQPALQGYLSKSVDDnAQGKLQG 337
Cdd:cd17324  248 VVG-SPLAGRLADRGGRRALLIALLLLAAALLLLTLLGPSPLLLLVGLVLWGLGfFAAHSALQTRVLRLAPE-ARGLASS 325
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 505244445 338 TLVSLTNITGIIGPLLFAFIYSYSVayWDGLLWLMGAILYAMLLITA 384
Cdd:cd17324  326 LYLAAYNLGGALGAALGGLVLDHGG--WAGVGWVGAALLLLALLLAL 370
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
12-388 1.00e-21

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 95.32  E-value: 1.00e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  12 TVLDAIGIGLIMPVLPTLLNEF-VSENSLAThygvLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAF 90
Cdd:cd17321    5 VFLAALDVTIVNVALPTIARDLgASPSQLQW----VVNAYLLAFAALLLLAGRLGDRFGRKRVFLIGLALFGLASLLCAL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  91 STTLWMLYIGRIIAGITGATGAACASA-MSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDIsAHMPFIFAAISHS 169
Cdd:cd17321   81 APSLAFLIAARALQGIGAAAIMPASLAlIAATFPGERRGRALGLWGAVVGIGAALGPLLGGLLLEL-FGWRWIFLINVPI 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 170 ILLilsllffretqkreALVANRTPENQTASNTVTVFFKKSLYFWLATYFiiqligqipatiwvlftQYRFDWNTTSIGM 249
Cdd:cd17321  160 GLV--------------ALLLARTFSGAVLAAFLLGAALGGLLFLLPLYL-----------------QGVLGYSPLQAGL 208
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 250 SLAVLGVLhIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGH---VWVILPALICLAAG-GMGQPALQGYLSK 325
Cdd:cd17321  209 ALLPLALA-MLVAAPLAGRLADRFGPRLVLVAGLLLTAVGLLLLALLGAdssVWLLLPGLVLLGLGlGLFATPLTNAALS 287
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 505244445 326 SVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLLWLMGAILYAMLLITAYFHQ 388
Cdd:cd17321  288 SVPKEKAGAASGILNTARQLGGALGVALLGALLTAGLSANLGDSGVAALLSAAAAAFAAGFHL 350
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
40-395 7.25e-20

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 90.33  E-value: 7.25e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  40 ATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATG-AACASAM 118
Cdd:COG2223   39 AAQLGLLFAIPVLVGALLRIPLGFLVDRFGPRRVLLIGLLLLGIGLLLLALAVSYWLLLLLGLLLGIGGGGSfAVGIALV 118
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 119 SDVTPAKNRTRYFGFLSGAFGVG-LIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRETQKREALVANRTPENQ 197
Cdd:COG2223  119 SKWFPPDRRGLALGLAAGGGNLGaAVAAFLAPLLIAAFGWRNAFLILGILLLVVAVLAWLFLRDPPAGAAAAAKASLRDQ 198
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 198 TAsntvtVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMSLAVLGVLHIFFQaIVAGKLAQKWGEKT 277
Cdd:COG2223  199 LE-----ALRDPRFWLLSLLYFGTFGSFIGFSSWLPPYLVDQFGLSAATAGLLAALFALLGALGR-PLGGWLSDRIGGRR 272
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 278 TIMISMSIDMMGCLLLAWIGHVWVILPALICL--AAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFA 355
Cdd:COG2223  273 VLLIVFALMALGLLLLALALGSLWLFLVLFLLlgLALGGGNGAVFALVPDIFPTKNAGAVYGLVGAAGGLGGFLGPLLFG 352
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|
gi 505244445 356 FIYSYSVAYWDGLLWLMGAILYAMLLITAYFHQRKTTPKA 395
Cdd:COG2223  353 ALLDATGSYTAAFLVFAVLALVALVLTLLLYRRPRRAAAA 392
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
1-165 7.30e-20

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 90.33  E-value: 7.30e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445   1 MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENslATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLG 80
Cdd:cd17325  197 RDRRLLALFLAIFVLAFAFGALEPFLPLYAAELGGLS--PAQIGLLFGAQGLASALSQPPAGKLSDRIGRKPLILIGLLL 274
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  81 AALDYLLMAFSTTLWMLYIGRIIAGI-TGATGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGD-ISAH 158
Cdd:cd17325  275 SAVALLLLPLATSFWLLLLLLALLGLgLGLVFPATLALLADIVPPEGRGTAMGLFNTAFSLGMVLGPLLGGFLYDaFGFA 354

                 ....*..
gi 505244445 159 MPFIFAA 165
Cdd:cd17325  355 TPFLAAA 361
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
12-315 1.33e-19

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 89.56  E-value: 1.33e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  12 TVLDAIGIGLIMPVLPTLLNEF-VSENSLATHYGVLLTLYATMQVIFapilGRLSDKYGRKPILLFSLLGAALDYLLMAF 90
Cdd:cd17320    8 VALGPLAIDMYLPALPAIARDLgASASAVQLTLSAYLLGFALGQLLY----GPLSDRFGRRPVLLAGLLLFILASLLCAL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  91 STTLWMLYIGRIIAGITGATGAACASAMS-DVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISA-HMPFIFAAISH 168
Cdd:cd17320   84 ASSIEQLLIARFLQGLGAAAGSVVARAIVrDLYSGAELAKIFSLLMMILAIAPALAPLLGGLLLLFFGwRAIFVFLALLG 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 169 SILLILSLLFFRETQKREALvanRTPENQTASNTVTVFfkKSLYFWLATYFIIQLIGQIPATI----WVLFTQYRFDwnT 244
Cdd:cd17320  164 LLLLLLVLLFLPETLPEEKR---KPLLSSLLRAYKRVL--KNRRFLGYALALGLSFAGLFAYLaaapFIYIEQLGLS--P 236
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 505244445 245 TSIGMSLAVLGVLHIFFqAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLA----WIGHVWVILPALICLAAGGMG 315
Cdd:cd17320  237 AQFGLLFALNAIALILG-SLLNGRLVRRFGPRRLLRLGLLLLLAAALVLLlaalLGGLSLWPLVAPLFLIFFGFG 310
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
40-389 2.21e-19

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 88.77  E-value: 2.21e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  40 ATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGI-TGATGAACASAM 118
Cdd:COG2271   44 AAQLGLLASAFFLGYALGQIPAGLLADRFGRRRVLAIGLLLWGLATLLFGFATSFWQLLLLRFLLGLgEAGFFPAALKLI 123
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 119 SDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISA-HMPFIFAAISHSILLIlsllffretqkrealvanrtpenq 197
Cdd:COG2271  124 AEWFPPKERGRALGIFNAGGPLGGALAPPLLGWLLAAFGwRAAFLILGLPGLLLAL------------------------ 179
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 198 tasntvtvffkksLYFWLAT--YFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMSLAVLGVLHIFFqAIVAGKLAQKWGE 275
Cdd:COG2271  180 -------------LRFWLLAlaYFLVYFALYGFLTWLPTYLVEVRGLSLAQAGLLLSLPFLAGIVG-SLLGGWLSDRLGR 245
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 276 --KTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAG-GMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPL 352
Cdd:COG2271  246 rrKLVLAIGLLLAALALLLLALLPSPALAIALLFLAGFGlGGAFGLLWALAAELFPKKARGTASGLVNTFGFLGGALGPL 325
                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 505244445 353 LFAFIYSYSvaYWDGLLWLMGAILYAMLLITAYFHQR 389
Cdd:COG2271  326 LVGYLLDAT--GYQAAFLLLAALALLAALLALLLLRE 360
MFS_SLC46 cd17386
Solute carrier 46 (SLC46) family of the Major Facilitator Superfamily of transporters; The ...
56-377 2.42e-19

Solute carrier 46 (SLC46) family of the Major Facilitator Superfamily of transporters; The solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3) and similar proteins from insects and nematodes. The best-studied member is SLC46A1, also called proton-coupled folate transporter (PCFT), which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. SLC46A2, also called thymic stromal cotransporter protein (TSCOT), is a putative 12-transmembrane protein mainly expressed in the thymic cortex in a specific thymic epithelial cell (TEC) subpopulation. SLC46A3 is a lysosomal membrane protein that functions as a direct transporter of noncleavable antibody maytansine-based catabolites from the lysosome to the cytoplasm. The SLC46 family belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340944 [Multi-domain]  Cd Length: 360  Bit Score: 88.49  E-value: 2.42e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  56 IFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTL------WMLYIGRIIAGITGATGA---ACASAMSDVTPAKN 126
Cdd:cd17386   45 FSSLFLGSWSDRYGRKPPLLMSLVGLLLSSLILVLIVYFttvpsvWWFYLSAIPLALFGGFTAflsASFAYISDISSEKK 124
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 127 RTRYFGFLSGAFGVGLIIGPMLGG-LLGDISAHMPFIFAAISHSILLILSLLFFretqkrealvanrtpenqtasntvtv 205
Cdd:cd17386  125 RTYRMAILEVALGLGGFLGSLLSGhLFKALGYAWSFSISAALLLIALLYILFFL-------------------------- 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 206 fFKKSLYFWLATYFIIQLIGQipATIWVLFTQYRFDWNTT--SIGMSLAVLGVLHIFFQAIVAGKLAQKWGEKTTIMISM 283
Cdd:cd17386  179 -TLLILLLLAAFLTIFVLSGE--SDVLYLFVLEKFAWNVKdfSYFSTLGSLIYLTGMLGGVLLLRCLLKMSDSTLAMLGL 255
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 284 SIDMMGCLLLAWIGHVWVI-LPALICLAAGGMGqPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSV 362
Cdd:cd17386  256 ASHILSSLLFAFATNTWMMyLAAVVGMFNGIVG-PMIRSILSKLVPKSEQGKIFSLLSVLESLSPLVASPIYNNIYKATL 334
                        330
                 ....*....|....*
gi 505244445 363 AYWDGLLWLMGAILY 377
Cdd:cd17386  335 TTFPGFFFLLSAGLL 349
MFS_MMR_MDR_like cd17504
Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) ...
21-386 5.44e-19

Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of putative multidrug resistance (MDR) transporters including Chlamydia trachomatis antiseptic resistance protein QacA_2, and Serratia sp. DD3 Bmr3. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341047 [Multi-domain]  Cd Length: 371  Bit Score: 87.63  E-value: 5.44e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  21 LIMPVLPTLLNEFvseNSLATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIG 100
Cdd:cd17504   14 MLSPALPTIQREF---GTSAAAVSWVLTAYLLVGAVSTPILGRLGDLYGRKKVLLIVLAIYTAGSLLAAFAPNLPVLIAG 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 101 RIIAGITGATGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGD-ISAHMPFIFAAISHSILLILSLLFF 179
Cdd:cd17504   91 RALQGIGGAVFPLAFALVREEFPPERVPVAQGILSATFGIGAGIGLPLGGWIVQhLGWRWIFWTAAPVAVLLAALVPLID 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 180 RETQKREALVanrtpenqtASNTVTVFFKKSLYfwlATYFIIQLIGQIPATIWVLFTqyrfdwnTTSIGMSLAVLGVLHI 259
Cdd:cd17504  171 LRLLRRRNVL---------LANITALLAGFGMF---MVFQLLPQLLQLPTPTGFGLG-------ITEAGLLLLPGALVML 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 260 FFqAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLA-WIGHVWVILPALICLAAG-GMGQPALQGYLSKSVDDNAQGKLQG 337
Cdd:cd17504  232 IA-GPLAGRLIARVGPRRVLLIGLVISAVGLLLLAlLHSSLWALVVALLLIGIGlGLAFASLPNIVVESVPPDRTGIATG 310
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 505244445 338 TLVSLTNITGIIGP-LLFAFIYSYSVAYWDG---------LLWLMGAILYAMLLITAYF 386
Cdd:cd17504  311 MNTVLRTIGSAIGPaIAGAILTTYTVSITSGgvptegayvLAFLIGAALALAALLLSLL 369
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
12-270 5.18e-18

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 83.71  E-value: 5.18e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  12 TVLDAIGIGLIMPVLPTLLNEFvseNSLATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFS 91
Cdd:COG0477   23 TFLEGLDFTIVNVALPSIAADL---GASSAQLGWIVSAYLLGRAIGLLLFGRLGDRYGRKRVLLIGLLLFGLASLLCGLA 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  92 TTLWMLYIGRIIAGITGATGAACASAM-SDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISA-HMPFIFAAISHS 169
Cdd:COG0477  100 PSPELLIAARALQGIGAGGLMPGALALiAELFPARERGRALGLWGAAIGLGLALGPLLGGLLVAALGwRWIFLINAPLGL 179
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 170 ILLILSLLFFRETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGM 249
Cdd:COG0477  180 LALVLRLRLPESRGLLLALLALALAALLLAALALALLALLLLLLLLLLALLALLLAGAALLLLLALLLLALLLLLALLLL 259
                        250       260
                 ....*....|....*....|.
gi 505244445 250 SLAVLGVLHIFFQAIVAGKLA 270
Cdd:COG0477  260 AALLLLLLLLLLLALLLALLL 280
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
14-394 2.87e-16

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 79.51  E-value: 2.87e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  14 LDAIGIGLIMPVLPTLLNEFVSENSLAthyGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTT 93
Cdd:COG0738   19 LWGFATALWGPLIPALKDAFGLSDAQA---GLLLFAFFLGYLLASLPAGRLIDRFGYKRGLLLGLLLMALGLLLFALAPS 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  94 LWMLYIGRIIAGITGATGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLL----GDISAHMPF-IFAAISH 168
Cdd:COG0738   96 YPLLLLALFLLGLGLGLLDVAANPYVAALGPETAASRLNLLHAFFSLGALLGPLLGGLLillgLSLSWHLPYlILAVLLL 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 169 SILLILSLLFFRETQKREAlvanrtpENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIW-VLFTQYRFDWNTTSI 247
Cdd:COG0738  176 LLALLFLRSKLPEIEEEEE-------EAAGSAASLKSLLKNPRLLLGGLAIFLYVGAEGAIGDWlPLYLKDVLGLSEATA 248
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 248 GMSLAVLGVLhIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAG-GMGQPALQGYLSKS 326
Cdd:COG0738  249 ALGLSLFWGG-MTIGRFLGGFLLKRFGPVRLLRLSALLAAVGLLLALLAPGPWLALIGLALVGLGlSLMFPTIFSLALDG 327
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 505244445 327 VDDNAqGKLQGTLVSLTNITGIIGPLLFAFI---YSYSVAYWdgllwlMGAILYAMLLITAYFHQRKTTPK 394
Cdd:COG0738  328 LGKRT-AAAVSAVLIMGIVGGAIGPPLIGFLadaFGLRAAFL------VPLVCYLLILLLALALKRKRRKK 391
MFS_YajR_like cd17472
Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux ...
18-153 9.19e-16

Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli inner membrane transport protein YajR and some uncharacterized multidrug-efflux transporters. YajR is a putative proton-driven major facilitator superfamily (MFS) transporter found in many gram-negative bacteria. Unlike most MFS transporters, YajR contains a C-terminal, cytosolic YAM domain, which may play an essential role for the proper functioning of the transporter. YajR-like transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341025 [Multi-domain]  Cd Length: 371  Bit Score: 78.03  E-value: 9.19e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  18 GIGLIMPVLPTLLNEFVSENSLAThyGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWML 97
Cdd:cd17472   11 GMFLVLPVLSVYAKSLPGATPTLI--GLALGIYGLTQAIFQIPFGLLSDRIGRKPVILFGLLLFIAGSLLAAYATSIYGL 88
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  98 YIGRIIAGItGATGAACASAMSDVTPAKNRTRYFGFLSG----AFGVGLIIGPMLGGLLG 153
Cdd:cd17472   89 ILGRALQGS-GAISSVVMALLADLTREENRTKAMALIGAsigiAFAISMVLGPLLAAHLG 147
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
45-165 3.15e-15

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 76.43  E-value: 3.15e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  45 VLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGI-TGATGAACASAMSDVTP 123
Cdd:cd17370  238 LLYALFNLVYALAAYPAGRLSDRIGRKKLLILGYLSLALAYLGFALGSSLWLLLLGFILWGLyMGAQESIERAAVADLVP 317
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 505244445 124 AKNRTRYFGFLSGAFGVGLIIGPMLGGLLGD-ISAHMPFIFAA 165
Cdd:cd17370  318 AELRGTAYGLFNTVVGIGWLLASLIAGYLWDlISPSAAFLFSA 360
MFS_Azr1_MDR_like cd17502
Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance ...
20-154 4.78e-15

Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341045 [Multi-domain]  Cd Length: 337  Bit Score: 75.68  E-value: 4.78e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  20 GLIMPVLPTLLNEFVSENSLATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYI 99
Cdd:cd17502    9 ALDQTIVATALPTIVAEFGGLSLVSWVGTAYLLTSTAFQPIYGKLSDLFGRKWVLLIAIVIFELGSLLCGLAPNMTMLIV 88
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 505244445 100 GRIIAGITGATGAACASA-MSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGD 154
Cdd:cd17502   89 GRAIQGIGGGGLMSLAFIiIADLVPPRERGKYQGYIGAVFGIASVAGPLIGGAFTD 144
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
44-382 8.49e-15

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 75.34  E-value: 8.49e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  44 GVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLG-----AALDYLLMAFSTTLWMLYIGRIIAGITGA-TGAACASA 117
Cdd:cd06173   37 GLVLAAFFLPFLLFSPFAGVLADRFDRRRLLILADLLrallaAVLALLALLGSLSLWLLLVLAFLLGIASAfFGPARQAL 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 118 MSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLL-GDISAHMPFIFAAISHSILLILSLlFFRETQKREALVANRTPEN 196
Cdd:cd06173  117 LPELVPKEQLVRANALNSLATQLARIIGPALGGLLvALLGPGGAFAINALSFLLSALLLL-FIRRPPPAAPGESSSLLLR 195
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 197 QTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMSLAVLGVlHIFFQAIVAGKLAQKWGEK 276
Cdd:cd06173  196 DLREGLRYLRRSPLLRLLLLALALFALLGGALTVLLPLLAKEVLGGGAAGYGLLLAAFGV-GALLGALLLGRLSKRRRRG 274
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 277 TTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAGGM-GQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFA 355
Cdd:cd06173  275 RLLLIGALLLGLALLVLGLSPSLWLLLAALFLLGLAGGlFNVPLNTLLQLRVPDELRGRVFSVYNALNSGAMPLGALLAG 354
                        330       340
                 ....*....|....*....|....*..
gi 505244445 356 FIYSYSVAYWdgLLWLMGAILYAMLLI 382
Cdd:cd06173  355 LLADALGLSA--VFLLAGALLLLAALL 379
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
12-382 5.72e-14

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 72.63  E-value: 5.72e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  12 TVLDAIGIGLIMPVLPTLLNEFVSENSLATHYGVLLTLYATMqVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFS 91
Cdd:cd17316    8 WFFDAYDFFLIGFVAPVLAAEFSLGLSLLQTGLLFAAGFLGR-PIGALLFGYLGDRIGRKKALILTLLLFGLATLLIGLL 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  92 TTLWMLYIGRIIAGI-TGATGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISAH-----MPFIFAA 165
Cdd:cd17316   87 PTPILLLVLRFLQGIgIGGEYPGASTYVAEFAPSKRRGFALGLLQSGWALGALLAALVASLLIPLLSGdwgwrILFLIGA 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 166 ISHSillilsllffretqkrealvanrtpenqtasntVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTT 245
Cdd:cd17316  167 LPAL---------------------------------LALLLRRRTLLLILLWFFISFGYYGLTTFLPTYLQTVLGLSPA 213
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 246 SIGMSLAVLGVLHIFFqAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWI--GHVWVILPALICLAA-GGMGQPALQGY 322
Cdd:cd17316  214 TSSLYLLLISLGALVG-ALIAGLLSDRIGRKKTLVIGLILSGILALPLFYLlsGSPTLLLLLLFILSFfVGGVWGALYAY 292
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 323 LSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLLWLMGAILYAMLLI 382
Cdd:cd17316  293 LAELFPTEVRATGVGLSYNLGRLGGGGAPPLIALLLASTGGTGVPALILALLAIVALIVA 352
MFS_Tpo1_MDR_like cd17323
Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of ...
12-154 1.21e-13

Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of fungal multidrug resistance (MDR) transporters including several proteins from Saccharomyces cerevisiae such as polyamine transporters 1-4 (Tpo1-4), quinidine resistance proteins 1-3 (Qdr1-3), dityrosine transporter 1 (Dtr1), fluconazole resistance protein 1 (Flr1), and protein HOL1. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, Flr1 confers resistance to the azole derivative fluconazole while Tpo1 confers resistance and adaptation to quinidine and ketoconazole. The polyamine transporters are involved in the detoxification of excess polyamines in the cytoplasm. Tpo1-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340881 [Multi-domain]  Cd Length: 376  Bit Score: 71.84  E-value: 1.21e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  12 TVLDAIGIGLIMPVLPTLLNEF-VSENSLATHYGVLLTLYATMQVIFAPilgrLSDKYGRKPILLFSLLGAALDYLLMAF 90
Cdd:cd17323    8 TFVVTFGSSIYSPALPQIAEDFhVSEEVANLGVSLFVLGFGLGPLIWAP----LSELYGRRPVYLVSLFIFVIFQIGCAL 83
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 505244445  91 STTLWMLYIGRIIAGITGATG-AACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGD 154
Cdd:cd17323   84 APNIAMLIILRFLQGFFGSSPlAIGAGTIADLFTPEERGKAMGVYSLGPLLGPALGPIIGGFITQ 148
MFS_MFSD14 cd17387
Major facilitator superfamily domain-containing 14A and 14B; This subfamily is composed of ...
21-358 1.38e-13

Major facilitator superfamily domain-containing 14A and 14B; This subfamily is composed of major facilitator superfamily domain-containing 14A (MFSD14A) and MFSD14B, and similar proteins. MFSD14A and MFSD14B are also called hippocampus abundant transcript 1 protein (HIAT1) and hippocampus abundant transcript-like protein 1 (HIATL1), respectively. They are both ubiquitously expressed with HIAT1 highly expressed intestis and HIATL1 most abundantly expressed in skeletal muscle. Gene disruption of MFSD14A causes globozoospermia and infertility in male mice. It has bee suggested that MFSD14A may transport a solute from the bloodstream that is required for spermiogenesis. The function of MFSD14B is unknown. The MFSD14 subfamily belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340945 [Multi-domain]  Cd Length: 410  Bit Score: 71.68  E-value: 1.38e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  21 LIMPVLPTLLNEFVSENSLAThyGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTtlWMLYIG 100
Cdd:cd17387   18 LTTPMITVLHETFPQHTFLMN--GLVQGVKGILSFLSAPLIGALSDVWGRKSFLLLTVFFTCAPIPLMRISP--WWYFAM 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 101 RIIAGITGATGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFR 180
Cdd:cd17387   94 ISVSGIFSVTFSVIFAYVADITTEEERSTAYGLVSATFAASLVTSPALGAYLSESYGDNLVVLVATIVALLDICFILLAV 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 181 EtqkrEALVANRTPENQTASNTVT----------VFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMS 250
Cdd:cd17387  174 P----ESLPEKMRPASWGAPISWEqadpfaslrkVGKDKTVLLICITVFLSYLPEAGQYSSFFVYLKQVMGFEYEEVAAF 249
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 251 LAVLGVLHIFFQAIVAGKLAQKWGEKTTIMISMSIDMmgcLLLAWIG---HVWVILPALICLAAGGMGQPALQGYLSKSV 327
Cdd:cd17387  250 IAVVGILSITAQTLLLSILMRSIGAKNTILLGLGFQM---LQLAWYGfgsQHWMMWAAGAVAAMSSITFPAISALVSRYA 326
                        330       340       350
                 ....*....|....*....|....*....|.
gi 505244445 328 DDNAQGKLQGTLVSLTNITGIIGPLLFAFIY 358
Cdd:cd17387  327 DPDQQGAVQGMITGIRGLCNGLGPALFGFVF 357
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
16-383 1.73e-13

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 71.05  E-value: 1.73e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  16 AIGIGLIMPVLPTLLNEFVSENSLAthyGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLW 95
Cdd:cd17477    9 GLGSGLLLPLLSLRLEREGVSTALI---GLVASAYYLGILLGSPLVPRLIRRVGHIRAFAAGAAITAVSVLLLALTDSPW 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  96 MLYIGRIIAGITGAT-GAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGdISAHMPFIFAAISHSILLIL 174
Cdd:cd17477   86 VWFLLRFVMGIGLAGlFVVSESWLNALATNENRGRVLGLYSTVLGLGFALGPLLLALVG-TAGALPFLIAAVLLLLALVP 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 175 SLLFFRetqkrealvANRTPENQTASNTVTVFFKKSLYFWLATYFiiqliGQIPATIWVLFTQY--RFDWNTTSIGMSLA 252
Cdd:cd17477  165 LLLTRR---------AAPEIEEAESISLRRLLRIAPLALLGAFVA-----GFLEGAFYSLLPLYglRLGLSVAQAALLLA 230
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 253 VLGVLHIFFQaIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAGGMG--QPALQGYLSKSVDDN 330
Cdd:cd17477  231 AFVLGGLLLQ-WPLGWLADRFDRRRVLLGCALLGALAALLLPLVPGLPLALLVLLFLWGGAAGplYTLALALAGDRLPGD 309
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|...
gi 505244445 331 AQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAywDGLLWLMGAILYAMLLIT 383
Cdd:cd17477  310 ELVAANAALLLLYGLGSVIGPLLAGALMDAFGP--HGLFLFLAAVALLFLLFL 360
MFS_YxlH_like cd17490
Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This ...
44-381 2.41e-13

Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Bacillus subtilis YxlH uncharacterized MFS-type transporter YxlH and similar proteins. The biological function of YxlH remains unclear. The YxlH-like subfamily belongs to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341043 [Multi-domain]  Cd Length: 371  Bit Score: 70.71  E-value: 2.41e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  44 GVLLTLYATMQVIFAPILGRLSDKYG-RKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAACASAMSDVT 122
Cdd:cd17490   34 GIILGAYGISQMLLRIPLGILSDRIGkRKLFIIIGLLFTVLASLIMILFPSPWGLLIARFLSGIAAATWVSFTVLYASYF 113
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 123 PAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGD-ISAHMPFIFAAisHSILLILSLLFFRETQKREAlvanrTPENQTASN 201
Cdd:cd17490  114 PPDEAAKAMGLINLVNNLGQLIAFLIGGLIAEhFGMRAPFLLAA--LAGVLGFILSLFIKEERREK-----KPVLTELKE 186
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 202 TVTVFFKKSLYFWLATYFIIQLIGQipATIWVLFTQYRFDWNTTSIgmSLAVLGVLHIFFQAIVAG----KLAQKWGEKT 277
Cdd:cd17490  187 LLSVLKDKKLLFFSLLAILQQMITF--STTFGFTPLIAKQLGASSF--QLGLLSIIYLLPNALASLlsgtLFYKKLGERN 262
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 278 TIMISMSIDMMGCLLLAWIGHVWVILPALICL-AAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLL--- 353
Cdd:cd17490  263 TIIIGFLLLGAYCFLIPFAPNLTLLYLLQALNgFGTGILFPLLMSLSIEGVPAEQRSTAMGFFQAIYALGMFLGPVLvgi 342
                        330       340
                 ....*....|....*....|....*....
gi 505244445 354 FAFIYSYSVAYW-DGLLWLMGAILYAMLL 381
Cdd:cd17490  343 ISEAFGLQTGFFvIGVIALLAAILSLAYY 371
efflux_Bcr_CflA TIGR00710
drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a ...
13-297 2.57e-13

drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.


Pssm-ID: 273229 [Multi-domain]  Cd Length: 385  Bit Score: 70.88  E-value: 2.57e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445   13 VLDAIGIGLIMPVLPTLLNEFVSENSLATHygvLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFST 92
Cdd:TIGR00710  15 ILGPLGIDMYLPAFPEIAADLSTPASIVQM---TLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSN 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445   93 TLWMLYIGRIIAGITGATGAACASAM-SDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGD-ISAHMPFIFAAISHSI 170
Cdd:TIGR00710  92 NIETLLVLRFVQAFGASAGSVISQALvRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVwLSWHAIFAFLSLAGIL 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  171 LLILSLLFFRETQKREalvaNRTPENQTASNTVTVFFKKS--LYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIg 248
Cdd:TIGR00710 172 LSALIFFILPETLPYE----ARIQISTYFETFLLLLKSKMfwGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGL- 246
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 505244445  249 msLAVLGVLHIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIG 297
Cdd:TIGR00710 247 --LFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITA 293
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
40-361 8.23e-13

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 69.55  E-value: 8.23e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  40 ATHYGVLLTLYATMQVIFAPILGRLSDKYG-----RKPILLFSLLGAALDYLLMAFS------TTLWMLYIGRIIAGITG 108
Cdd:COG2211   45 AALVGLILLVARLWDAITDPLIGALSDRTRtrwgrRRPWILIGAIPLALSFVLLFTApdlsptGKLIYALVTYLLLGLAY 124
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 109 ATGAACASAM-SDVTP-AKNRTRYFGFLSGAFGVGLIIGPMLGGLL----GDISAHMPFIFAAISHSILLILSLLFFRET 182
Cdd:COG2211  125 TLVNIPYSALgAELTPdYEERTRLSSWRFAFAGLGGLLASVLPPPLvaafGGDAALGYRLTALIFAVLGLLAFLLTFFGT 204
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 183 QKRealvANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIG-QIPATIWVLFTQYRFDWNTTSIGMSLAVLGVLHIFF 261
Cdd:COG2211  205 KER----PVPEEEKVSLKESLKALLKNRPFLLLLLAYLLFFLAlALVAALLLYYFKYVLGLSAALVGLLLALYFLAALLG 280
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 262 qAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGH---VWVILPALICLAAGGMGQPALQGYLSKSVDD-------NA 331
Cdd:COG2211  281 -APLWPRLAKRFGKKKAFIIGLLLAALGLLLLFFLGPgnlWLLLVLAALAGIGLGAILVLPWAMLADVVDYdewktgrRR 359
                        330       340       350
                 ....*....|....*....|....*....|
gi 505244445 332 QGKLQGTLVSLTNITGIIGPLLFAFIYSYS 361
Cdd:COG2211  360 EGLYFGIFTFAIKLGQALAGALAGLLLALF 389
MFS_YcxA_like cd17355
MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of ...
56-383 9.45e-13

MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters; This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340913 [Multi-domain]  Cd Length: 386  Bit Score: 68.84  E-value: 9.45e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  56 IFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYI--GRIIAGITGATGAACASAMSDVTPAKNRTRYFGF 133
Cdd:cd17355   53 LAQPFVGRLLDRFGPRRVMLLGLLLLAAGLVLLALATSLWQLYLlwGLLGGGGAGTLAAVAFATVAAWWFERRRGLALGI 132
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 134 LSGAFGVGLIIG-PMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRETQKREALVANRTPENQTASNTVTVFFKKSLY 212
Cdd:cd17355  133 LTAGGGLGSLVFlPLGAALIEAFGWRTALLVLALLALLVLVPVLLLLRRRPADLALRAYDDASPASPGSTLKEALRSASF 212
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 213 FWLATYFIIQLIGQ--IPATIWVLFTQYRFdwNTTSIGMSLAVLGVLHIFFQaIVAGKLAQKWGEKTTIMISMSIDMMGC 290
Cdd:cd17355  213 WLLALAFFLCGFAVvgLIVHLVPYLADRGI--SPAAAAVALALIGLFNIVGR-LLSGWLGDRYSPRRLLAASYALRALGL 289
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 291 LLLAWIGhvWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGII----GPLLFAFIY----SYSV 362
Cdd:cd17355  290 ALLLLLP--FPPLALLLFAALFGLGWGATVPLTAALAARYFGARSYGTLFGLVFAPHQLgsalGPWLGGLLYdrtgSYTA 367
                        330       340
                 ....*....|....*....|.
gi 505244445 363 AYWdgLLWLMGAILYAMLLIT 383
Cdd:cd17355  368 AWA--LAVALGLIAALLVLPI 386
BtlA COG2270
MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction ...
40-386 1.18e-12

MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction only];


Pssm-ID: 441871 [Multi-domain]  Cd Length: 424  Bit Score: 69.03  E-value: 1.18e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  40 ATHYGVLLTLYATMQVIFAPILGRLSDKYGRKP--ILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGA--ACA 115
Cdd:COG2270   51 TALWGYALAIAGLLVALLAPVLGAIADRSGRKKpfLAFFTLLGVLATAALFFVAPGGLWLGLLLFVLANIGFEGSlvFYN 130
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 116 SAMSDVTPAKNRTR---------YFG-FLSGAFGVGLIIGPmlgGLLGDISAHMP----FIFAAISHSILLILSLLFFRE 181
Cdd:COG2270  131 AFLPDIATPEEIGRvsglgwalgYLGgVLLLLINLALFLKP---EAFGLPDAGEAvrisFLLTALWWLLFALPLFLFLPE 207
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 182 TQKREALVANRTPENQTASNTVTVF----FKKSLYFWLATYFIIQLIgqipATIWVLFTQY---RFDWNTTSIGMSLAVL 254
Cdd:COG2270  208 RPRPGPAPPRGAVRAGFRELRRTLRelrrYRDLLRFLLAYFFYRDGV----QTVIAFAGIYaagVLGFSTTELIVFGLLV 283
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 255 GVLHIFFqAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWV--ILPALICLAAGGMgQPALQGYLSKSVDDNAQ 332
Cdd:COG2270  284 QIVAALG-ALLFGRLDDRIGPKRVILVSLVIWIVVCLAAYFLTTALAfwILGLLIGLVMGGI-QALSRSLLARLIPPGRE 361
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 505244445 333 GKLQGtLVSLT-NITGIIGPLLFAFIYsysvaywdgllWLMGAILYAMLLITAYF 386
Cdd:COG2270  362 AEFFG-LYALSgKAASFLGPLLFGLVT-----------QLTGSQRLGILSLIVFF 404
PRK09874 PRK09874
multidrug efflux MFS transporter MdtG;
14-357 4.96e-12

multidrug efflux MFS transporter MdtG;


Pssm-ID: 182127 [Multi-domain]  Cd Length: 408  Bit Score: 66.87  E-value: 4.96e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  14 LDAIGIGLIMPVLPTLLNEF--VSENSLATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFS 91
Cdd:PRK09874  25 LTGAAFSLVMPFLPLYVEQLgvTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLA 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  92 TTLWMLYIGRIIAGITGATGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSIL 171
Cdd:PRK09874 105 QNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFL 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 172 LILSLLFFretqKREALVANRTPENQTASNTVTVFFKKSLYFWL-ATYFIIQLIGQIPATIWVLFTQyRFDWNTTSI--- 247
Cdd:PRK09874 185 CFLVTLFC----IRENFQPVSKKEMLHMREVVTSLKNPKLVLSLfVTTLIIQVATGSIAPILTLYVR-ELAGNVSNIafi 259
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 248 -GMSLAVLGVLHIfFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVI-LPALICLAAGGMGQPALQGYLSK 325
Cdd:PRK09874 260 sGMIASVPGVAAL-LSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLgILRFLLGAADGALLPAVQTLLVY 338
                        330       340       350
                 ....*....|....*....|....*....|..
gi 505244445 326 SVDDNAQGKLQGTLVSLTNITGIIGPLLFAFI 357
Cdd:PRK09874 339 NSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAI 370
MFS_LmrB_MDR_like cd17503
Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) ...
26-330 1.44e-11

Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including Bacillus subtilis lincomycin resistance protein LmrB, and several proteins from Escherichia coli such as the putative MDR transporters EmrB, MdtD, and YieQ. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341046 [Multi-domain]  Cd Length: 380  Bit Score: 65.29  E-value: 1.44e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  26 LPTLLNEFvseNSLATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAG 105
Cdd:cd17503   19 LPTIMGDL---GASLDTVQWVITSYLLALAIMIPLSGWLADRFGTRRLFLTALALFTLGSLLCGLAPNLASLIIFRILQG 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 106 ITGATGAACA-SAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGD-ISAHMPFIFAAISHSILLILSLLFfretq 183
Cdd:cd17503   96 FGGGVLIPLAqTILLRIYPPEKRGAAMGLVGLVILLAPAIGPTLGGWLTDnLSWRWIFYINLPIGILALLLAPLL----- 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 184 kREALVANRTpenqtasntvtvFFKKSLYFWLATYFIIQLIGQIPatiwvLFTQYRFDWNTTSIGMSLAVLGVLHIFFqA 263
Cdd:cd17503  171 -DLRLFKDRN------------FTLGLLLSFLLGLGLFGAMFLLP-----LYLQNVLGYSAFESGLVLAPGGLASAIL-S 231
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 505244445 264 IVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGH---VWVILPALICLAAG-GMGQPALQGYLSKSVDDN 330
Cdd:cd17503  232 PLVGRLLDKFGPRLLLLAGLLLLALGTLLLAFLTPdtsLWLIILPLFIRGLGmGLVFMPLNTLALNSLPPE 302
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
1-165 2.16e-11

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 64.92  E-value: 2.16e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445   1 MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEfvsenSLATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLG 80
Cdd:cd17489  192 VEKKVLPPALILFLASIAYGAISTFLPLYAAE-----RGISNAGLFFTVYAIALLLSRPFSGKLSDRKGPKTVIIPGLLL 266
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  81 AALDYLLMAFSTTLWMLYIGRIIAGITGATGA-ACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISAH- 158
Cdd:cd17489  267 LALGLLLLSFAGSPWMLLLAAVLYGLGFGLLFpALQALAVDLVPPHRRGAANGTFFIFFDLGIGLGGLLLGLVAELFGYr 346

                 ....*..
gi 505244445 159 MPFIFAA 165
Cdd:cd17489  347 AMFLLAA 353
MFS_OFA_like cd17353
Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of ...
47-376 1.44e-10

Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of Oxalobacter formigenes oxalate:formate antiporter (OFA or OxlT) and similar proteins. O. formigenes, a commensal found in the gut of animals and humans, plays an important role in clearing dietary oxalate from the intestinal tract, which is carried out by OFA/OxlT, an anion transporter that facilitates the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation. This exchange generates an electrochemical proton gradient and is the source of energy for ATP synthesis in this cell. The OFA-like subfamily belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340911 [Multi-domain]  Cd Length: 389  Bit Score: 62.24  E-value: 1.44e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  47 LTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGriiAGITGATGAACASAmsdvTPAKN 126
Cdd:cd17353   44 FTLTIVFLAISAPFAGRLVDRGGPRKAILIGGILFGLGFILSAFAISLPLLFLG---YGVLGGIGAGIGYI----TPVST 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 127 RTRYF--------GFLSGAFGVG-LIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRETQKREALVANRTPENQ 197
Cdd:cd17353  117 AVKWFpdkrglatGIVIAGFGLGsLIFSPLIAYLINTVGVPTTFLILGIIFLIIIVIGAFLIRDPPKGWVPPGVDPLANN 196
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 198 TASNTVTVFFKKSL---YFWL--ATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMSLAVLGVLHIFFQaIVAGKLAQK 272
Cdd:cd17353  197 AENSPRDYTPREMLrtpTFWLlwLMFFLNATAGLMLIGQAKPIGQEFAGLDAGIAALAVSILSIFNGGGR-PFWGWLSDK 275
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 273 WGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAGGMGQ--PALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIG 350
Cdd:cd17353  276 IGRKNTLSIAFLIQGVAMFLLPFIGSVAVLFVLGVALIGFCYGGgfALFPALTADFFGTKNAGTNYGLLYTAKGVGGLIG 355
                        330       340       350
                 ....*....|....*....|....*....|
gi 505244445 351 PLLFAFI---YSYSVA-YWDGLLWLMGAIL 376
Cdd:cd17353  356 PIIAAYVlytGGYNAAfIIAAALSLVALAL 385
MFS_spinster_like cd17328
Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; ...
21-154 1.85e-10

Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; The protein spinster family includes Drosophila protein spinster, its vertebrate homologs, and similar proteins. Humans contain three homologs called protein spinster homologs 1 (SPNS1), 2 (SPNS2), and 3 (SPNS3). Protein spinster and its homologs may be sphingolipid transporters that play central roles in endosomes and/or lysosomes storage. SPNS2 is also called sphingosine 1-phosphate (S1P) transporter and is required for migration of myocardial precursors. S1P is a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. The spinster-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340886 [Multi-domain]  Cd Length: 405  Bit Score: 62.25  E-value: 1.85e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  21 LIMPVLPTLLNEFVSENSLAthyGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIG 100
Cdd:cd17328   17 TIAGVLPDIQSDFLIDDSLA---GLLQTVFIISYMVLSPIFGYLGDRYNRKWILAVGILIWSAATLLSSFAPNFWQLLLF 93
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 505244445 101 RIIAGITGATGAACA-SAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGD 154
Cdd:cd17328   94 RALVGIGEASYSPIApTIIADLFPKEKRTRALGVFYFAIPLGSGLGYVVGGLVAQ 148
MFS_Set cd17471
Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; ...
12-305 3.49e-10

Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; This family is composed of sugar transporters such as Escherichia coli Sugar efflux transporter SetA, SetB, SetC and other sugar transporters. SetA, SetB, and SetC are involved in the efflux of sugars such as lactose, glucose, IPTG, and substituted glucosides or galactosides. They may be involved in the detoxification of non-metabolizable sugar analogs. The Set family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341024 [Multi-domain]  Cd Length: 371  Bit Score: 61.02  E-value: 3.49e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  12 TVLDAIGIGLIMPVLPTLLNEFVSENSLAthYGVLLTLYATMQVIFAPILGRLSDK-YGRKPILLFSLLGAALDYLLMAF 90
Cdd:cd17471    5 TLLTGLAGAFVLPYLSLFLTEELGASPLQ--IGIFMTLSALSGIVVSQWLGRLSDRgGDRKPLILLALLAGALGYLLFAF 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  91 STTLWMLyigrIIAGIT-GATGAACASAM-------SDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGD-ISAHMPF 161
Cdd:cd17471   83 LRNYWVL----LLVGVVlLSLGAAAFPQLfalareyADRSSGRDATLFNSVLRAAFSLAWVIGPPLAFLLLDvLGFTGLF 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 162 IFAAISHSILLILSLLFFRETQKREALVANRTPENQTASN--TVTVFFKKSLYFWLATYFIIQLigqiPatiwvLFTQYR 239
Cdd:cd17471  159 LLAALLYLVVALLVLFLLPSVKPPAQKATPASSLVKAPVNrrLLLLFAAFTLLFAANSMYIIAM----P-----LYVTNE 229
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 505244445 240 FDWNTTSIGMSLAVLGVLHIFFqAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPA 305
Cdd:cd17471  230 LGGSESWVGLLFGLAAALEIPI-MLLAGLLAKRFGKRRLLLAGFLAGVLFYLGLALATSLWQLIAL 294
MFS_MFSD8 cd17326
Major facilitator superfamily domain-containing protein 8; Major facilitator superfamily (MFS) ...
14-383 3.87e-10

Major facilitator superfamily domain-containing protein 8; Major facilitator superfamily (MFS) domain-containing protein 8 (MFSD8) is also called ceroid-lipofuscinosis neuronal protein 7 (CLN7). It is a polytopic lysosomal membrane protein that may transport small solutes by using chemiosmotic ion gradients. Mutations in MFSD8/CLN7 cause a variant of late-infantile neuronal ceroid lipofuscinoses (vLINCL), a neurodegenerative lysosomal storage disorder. Some variants are associated with nonsyndromic autosomal recessive macular dystrophy. MFSD8/CLN7 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340884 [Multi-domain]  Cd Length: 374  Bit Score: 61.07  E-value: 3.87e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  14 LDAIGIGLIMPVLPTLLNEFVSEnSLATHYGVLLTLYATMQVIFAPILGRLSDKYG-RKPILLFSLLGAALDYLLMAF-- 90
Cdd:cd17326   10 LSSLQFSIVLTSIWPYLQKIDPT-ATASFFGWVVAAYSLGQLVFSPVFGYWSNKTSsVKEPLIVSILIAIVGNILYALae 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  91 ---STTLWMLYIGRIIAGITGATGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLL-------GDISAHMP 160
Cdd:cd17326   89 yfpSNRKYVMLVARFLIGVGAGNVAVLRAYVAAASTLKDRTRAMAVISAAQALGFIVGPALQAAFtpigypgYVIGIKLR 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 161 F-------IFAAISHSILLILSLLFFREtqkrealvanrtpenqtasntvtvFFkkSLYFWLATYFIIQLIGqipaTIWV 233
Cdd:cd17326  169 FnmytapaWLMAILGIINIILILFFFKE------------------------VV--CIFLFFVVLFIFANLE----TIGT 218
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 234 LFTQYRFDWNTTSI----GMSLAVLGVLHIFFQAIVAGKLAQKWGEKTTimismsidMMGCLLLAWIGHVwVILPALICL 309
Cdd:cd17326  219 PLTMDMYGWTREEAvlynGIILAVSGVLSVLVFLLFKFLSLGLIDERKI--------LLGGLILFFLGFV-VTLPWGITG 289
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 505244445 310 AAG-GMGQP----ALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYWdglLWLMGAILYAMLLIT 383
Cdd:cd17326  290 VILfGLGYPignvMLYTLYSKILGPKPQGTMQGVLTASGSLARTLGPIFVTAIYTHFGPRW---TWIITLGLLLLAIIL 365
MFS_FucP_MFSD4_like cd17333
Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein ...
20-382 9.46e-10

Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4, and similar proteins; This family is composed of bacterial L-fucose permease (FucP), eukaryotic Major facilitator superfamily domain-containing protein 4 (MFSD4) proteins, and similar proteins. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. The MFSD4 subfamily consists of two vertebrate members: MFSD4A and MFSD4B. The function of MFSD4A is unknown. MFSD4B is more commonly know as Sodium-dependent glucose transporter 1 (NaGLT1), a primary fructose transporter in rat renal brush-border membranes that also facilitates sodium-independent urea uptake. The FucP/MFSD4 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340891 [Multi-domain]  Cd Length: 372  Bit Score: 59.64  E-value: 9.46e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  20 GLIMPVLPTLLNEFVSenslatHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYI 99
Cdd:cd17333   16 GILGPSLEEAFNLNVA------DVSVIFSSQNAGYLIGSLLAGFLMKRLGRRRTLILGLLLISLALALIFATPSIYLFVV 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 100 GRIIAGITGATGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFF 179
Cdd:cd17333   90 LMFLAGLGAGILDTGANTFVGALFEESSATRLNVLHGFFGLGALIGPLIATSLLTSELSWSWAYLIIGLIYLLLAILILL 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 180 reTQKREALVANRTPENQTASNTVTVFFKKSLY-FWLATYFIIQLIGQIPATIWV-LFTQYRFDWNTTSIGMSLAVLGVL 257
Cdd:cd17333  170 --TLFPELPSARNPQQSVGAFSASASRLLRNPSiILGALALFLYVGAETAFSSWVpSYLVEKKHVSDGLAGYLLSGFWVG 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 258 hIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAGGMGQ-PALQGYLSKSVdDNAQGKLQ 336
Cdd:cd17333  248 -ITIGRLLGGPISRRIKPHTLLVLSGSGALLGLLILLLAPTLVVGLVATALLGLFMAALfPTILSLGISNL-PYAKGKGT 325
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 505244445 337 GTLVSLTNITGIIGPLLFAFIYSY-SVAYWDGLLWLMGAILYAMLLI 382
Cdd:cd17333  326 SVLLAAGSIGGAIIPFIMGFIAEAvGIQTAMLLITILYAIIFVLALL 372
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
18-386 1.34e-09

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 59.50  E-value: 1.34e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  18 GIGLIMPVLPTLLNEFVSENSLAthyGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWML 97
Cdd:COG2807   33 AITSVGPLLPEIRADLGLSATQA---GLLTTLPLLAFGLFAPLAPRLARRFGLERTLLLALLLLAAGLLLRSLAPSVALL 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  98 YIGRIIAGITGATGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGG-LLGDISAHMPFIFAAISHSILLILSL 176
Cdd:COG2807  110 LAGTALIGAGIAVGNVLLPGLIKRWFPDRVGLMTGLYTAAMGLGAALAAGLTVpLAAALGWRGALAVWALLALLALLLWL 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 177 LFFREtqkrealvANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWvLFTQYRfdwnttSIGMSLAVLGV 256
Cdd:COG2807  190 PLLRR--------RPAAAAAAPAAASLRSLWRSPLAWLLTLFFGLQSLLYYAVVAW-LPPILR------DAGLSAATAGL 254
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 257 LHIFFQ------AIVAGKLAQKWGEKTTIMISMSIDMM-GCLLLAWIGHVWVILPALICLAAGGMGQPALQGYLSKSVDD 329
Cdd:COG2807  255 LLSLFQlagipgSLLVPLLADRLGDRRPLLLLLGLLGLaGLLGLLLAPGSLPWLWAVLLGLGQGGLFPLALTLIGLRART 334
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 505244445 330 NAQ-GKLQGTLVSLTNITGIIGPLLFAFIYSYSvAYWDGLLWLMGAILYAMLLITAYF 386
Cdd:COG2807  335 PAEaAALSGMAQSVGYLLAALGPLLVGALHDAT-GSWTAALLLLAALAVLMLVAGLLA 391
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
40-382 3.06e-09

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 57.97  E-value: 3.06e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  40 ATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATG-AACASAM 118
Cdd:cd17319   37 PTQYGLIASAFFLGYALFQVPGGWLLDRFGARKVLAVSMLLWSLFTALTGFATSLTSLYVLRFLLGVAEAGFfPGAIKAL 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 119 SDVTPAKNRTRYFGFLSGAFGVGLIIG-PMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRETQkreALVAnrtpeNQ 197
Cdd:cd17319  117 AEWFPARERGRATGLFNSGAPLGAAIGpPLSGWLLLLFGWRWAFIIEGLLGLLLAVLWWFYLRQVW---GLAL-----GY 188
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 198 TASNTVTVFFkkslYFWLATYfiiqligqipatiwvLFTQYRFDWNTTSIgmsLAVLGVLHIFFQAIVAGKLAQK---WG 274
Cdd:cd17319  189 FGINYALYGL----LTWLPTY---------------LKQARGFSLKQVGL---LAAIPFLAGAIGMILGGRLSDRllrGA 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 275 EKTTIMISMSIDMMGCLLLAWIGHVWVILpALICLAAGG--MGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPL 352
Cdd:cd17319  247 RRLVIIIGLLLAAVGLLLAYLTTSPVVAV-ILLSLAGFGigAASPVFWSLPADLLPGEAAATAGGLINSGGNLGGFVAPL 325
                        330       340       350
                 ....*....|....*....|....*....|
gi 505244445 353 LFAFIYSYSVAYWDGLLWLMGAILYAMLLI 382
Cdd:cd17319  326 LIGYLVDATGSYTAAFLFLAAVALLAALLV 355
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
55-357 3.64e-09

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 58.14  E-value: 3.64e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445   55 VIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGI-TGATGAACASAMSDVTPAKNRTRYFGF 133
Cdd:TIGR00895  66 AFGALFFGPLADRIGRRRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLgLGGLMPNLNALVSEYAPKRFRGTAVGL 145
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  134 LSGAFGVGLIIGPMLGGLLG-DISAHMPFIFAAISHSILLILSLLFFRE----TQKREALVANRT--------------- 193
Cdd:TIGR00895 146 MFCGYPIGAAVGGFLAGWLIpVFGWRSLFYVGGIAPLLLLLLLMRFLPEsidfLVSKRPETVRRIvnaiapqmqaeaqsa 225
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  194 -PENQTASNTVTVFFK---------KSLYFWLATYFiiQLIGQIPATIW--VLFTQYRFDWNTTSIGMSLAVLGVLhifF 261
Cdd:TIGR00895 226 lPEQKSTQGTKRSVFKalfqgktarITVLLWLLYFM--LLVGVYFLTNWlpKLMVELGFSLSLAATGGALFNFGGV---I 300
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  262 QAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICL-AAGGMGQPALQGYLSKSVDDNAQGKLQGTLV 340
Cdd:TIGR00895 301 GSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAgFFVNGGQSGLYALMALFYPTAIRATGVGWAI 380
                         330
                  ....*....|....*..
gi 505244445  341 SLTNITGIIGPLLFAFI 357
Cdd:TIGR00895 381 GIGRLGAIIGPILAGYL 397
Sugar_tr pfam00083
Sugar (and other) transporter;
27-158 5.36e-09

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 57.67  E-value: 5.36e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445   27 PTLLNEFVSENSLATHYGVLLTLYATMQVIFAP----------ILGRLSDKYGRKPILLFSLLGAALDYLLMAFST---T 93
Cdd:pfam00083  22 FLTLIDFFKNFGLSKSVSSLAALSVLSGLIVSIfsvgcfigslFAGKLGDRFGRKKSLLIANVLFVIGAVLQGAAKgkwS 101
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 505244445   94 LWMLYIGRIIAGItGATGAACASAM--SDVTPAKNRtryfGFLSGAFGVGLIIGPMLGGLLGDISAH 158
Cdd:pfam00083 102 VYQLIVGRVLVGI-GVGGASVLAPMyiSEIAPKKLR----GALGSLYQLAITFGILLAYIFGLGLNK 163
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
25-152 7.94e-09

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 56.93  E-value: 7.94e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  25 VLPTLLNEFVSENSLATHY-GVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRII 103
Cdd:cd17371   17 LLGLVLPALIAEFGLDEAEaGLLGTVTLAGGAIGGILGGILADRFGRVRVLVITILLFAVFTLLCGFAQNYWQLLILRAL 96
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 505244445 104 AGI-TGATGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLL 152
Cdd:cd17371   97 AGLgFGGEWAAGAALMAEYVPARHRGKALGYVQSGWAVGWLLATLLAALL 146
MFS_SLC45_SUC cd17313
Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily ...
40-320 2.96e-08

Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters; This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340871 [Multi-domain]  Cd Length: 421  Bit Score: 55.33  E-value: 2.96e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  40 ATHYGVLLTLYATMQVIFAPILGRLSD----KYG-RKPILLFSLLGAALDYLLMAFSTTLWMLYI--GRIIAGITGATGA 112
Cdd:cd17313   33 HALIGFVWTLGPILGLFVQPLVGSLSDrcnsRIGrRRPFILVGAPLAALGLILIPNAADIGLALGdgPRTWALVLFVLGI 112
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 113 ACA------------SAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISAH---------MPFIFAAISHSIL 171
Cdd:cd17313  113 VLLdfamnvcqgpvrALLPDLVPPEQRSKANGIINFMGGLGGVLGYLLGAILWDHNWFgfalggnlkVPFYIGAIILLVC 192
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 172 LILSLLFFREtqKREALVANRTPENQTASNTVTVFFK--KSLYFWLATYFIIQLIGQIP-ATIWVLFTQY--RFDWNTTS 246
Cdd:cd17313  193 VLVTLFFVKE--PPLSPEAGEHSENPSLGEVLKSLLKllKIMPRSLLRLLLVIFFWWIAfFPFELFFTDYmgEEVYHGTS 270
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 247 I------------GMSLAVLGVLHIFFqAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVilpALICLAAGGM 314
Cdd:cd17313  271 AasshygagvrmgAWGLLIFSLAFLIF-SLPIGKLGKKIGRKKVYLIGLVLFAVGMALMALVHNVTV---ALVLFALGGI 346

                 ....*.
gi 505244445 315 GQPALQ 320
Cdd:cd17313  347 GWATIN 352
MFS_SLC18A1_2_VAT1_2 cd17384
Vesicular amine transporters 1 (VAT1) and 2 (VAT2), and similar transporters of the Major ...
14-165 3.21e-08

Vesicular amine transporters 1 (VAT1) and 2 (VAT2), and similar transporters of the Major Facilitator Superfamily; Vesicular amine transporter 1 (VAT1 or VMAT1) is also called solute carrier family 18 member 1 (SLC18A1) or chromaffin granule amine transporter, while VAT2 (or VMAT2) is also called SLC18A2, synaptic vesicular amine transporter, or monoamine transporter. VATs (or VMATs) are responsible for the uptake of cytosolic monoamines into synaptic vesicles in monoaminergic neurons. VAT1 and VAT2 distinct pharmacological properties and tissue distributions. VAT1 is preferentially expressed in neuroendocrine cells and endocrine cells, where it transports biogenic monoamines, such as serotonin, from the cytoplasm into the secretory vesicles. VAT2 is primarily expressed in the CNS and is involved in the ATP-dependent vesicular transport of biogenic amine neurotransmitters including dopamine, norepinephrine, serotonin, and histamine into synaptic vesicles. VATs belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340942 [Multi-domain]  Cd Length: 373  Bit Score: 54.89  E-value: 3.21e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  14 LDAIGIGLIMPVLPTLLNEFVsenslatHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTT 93
Cdd:cd17384   11 LDNMLLTVVVPIIPDYLNENV-------RVGLLFASKALVQLITNPIVGPLTNRIGYSLPMFVGFVIMFISTLLFAFGES 83
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 505244445  94 LWMLYIGRIIAGItgatGAACAS--AMSDV----TPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISAHM-PFIFAA 165
Cdd:cd17384   84 YGVLFLARALQGV----GSACSSvaGMGMLaslyPDDKERGKAMGIALGGLALGVLVGPPFGGVMYEFVGKSaPFLILA 158
MFS_SLC18B1 cd17385
Solute carrier family 18 member B1 of the Major Facilitator Superfamily of transporters; ...
16-152 9.61e-08

Solute carrier family 18 member B1 of the Major Facilitator Superfamily of transporters; Solute carrier family 18 member B1 (SLC18B1) is the fourth member of the SLC18 transporter family, which includes vesicular monoamine transporters and vesicular acetylcholine transporter. It is predominantly expressed in the hippocampus and is associated with vesicles in astrocytes. It actively transports spermine and spermidine by exchange of H(+), and has been suggested to be a vesicular polyamine transporter (VPAT). SLC18B1 belongs to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340943 [Multi-domain]  Cd Length: 390  Bit Score: 53.76  E-value: 9.61e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  16 AIGIGLIMPVLPTLLNEFvseNSLATHYGVLLTLYATMQVIFAPILGRLSDKYG-RKPILLFSLLGAALDYLLMA----- 89
Cdd:cd17385  214 SVSLGFLDPTLSPHLRQF---KLSPGQVGLMFLILAGSYAISAPLWGWLSDKKKiPKWLMVIGSIITGVGFLLLGpapll 290
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 505244445  90 -FSTTLWMLYIGRIIAGItgATGAACASAMSDvtpAKNRTRYFGF-------------LSGAFGVGLIIGPMLGGLL 152
Cdd:cd17385  291 pIKSELWMVIIGLVLLGL--SLGAALVPTFPE---LLNCAREYGFpdnlstyglvsglFNAAFSLGAFIGPTLGGFL 362
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
62-376 1.74e-07

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 52.55  E-value: 1.74e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  62 GRLSDKYG-RKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAACASAM-SDVTPAKNRTRYFGFLSGAFG 139
Cdd:cd17370   55 GYLSDRTGkRKPLVILGYGLSALAKPLLALAGSWQLVLLLRILERLGKGIRTPPRDALlADATPPSGRGKAFGLHRALDT 134
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 140 VGLIIGPMLGGLL---GDISAHMPFIFAAISHSILLILSLLFFRETQKREALVANRtpenqtaSNTVTVFFKKSLYFWLA 216
Cdd:cd17370  135 LGAVLGPLLAALLlylLGGNYRTIFLLAAIPALLALLILLFVVKEYPRPPKLRKKS-------KKTSLKKLPKAFWLYLL 207
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 217 TYFIIQLiGQIPATIWVLFTQyRFDWNTTSIGMSLAVLGVLHIFFqAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWI 296
Cdd:cd17370  208 AVALFAL-GNFSFAFLILRAQ-ELGLSAALIPLLYALFNLVYALA-AYPAGRLSDRIGRKKLLILGYLSLALAYLGFALG 284
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 297 GHVWVILPALICLAAG-GMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIY---SYSVAYWDGLLWLM 372
Cdd:cd17370  285 SSLWLLLLGFILWGLYmGAQESIERAAVADLVPAELRGTAYGLFNTVVGIGWLLASLIAGYLWdliSPSAAFLFSAVLAL 364

                 ....
gi 505244445 373 GAIL 376
Cdd:cd17370  365 IALL 368
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
40-184 3.22e-07

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 51.79  E-value: 3.22e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  40 ATHYGVLLTLYATMQVIFAPILGRLSDKYGR--KPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGI-TGATGAACAS 116
Cdd:COG2271  215 LAQAGLLLSLPFLAGIVGSLLGGWLSDRLGRrrKLVLAIGLLLAALALLLLALLPSPALAIALLFLAGFgLGGAFGLLWA 294
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 505244445 117 AMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISA-HMPFIFAAISHSILLILSLLFFRETQK 184
Cdd:COG2271  295 LAAELFPKKARGTASGLVNTFGFLGGALGPLLVGYLLDATGyQAAFLLLAALALLAALLALLLLRETRK 363
MFS_MFSD6 cd17335
Major facilitator superfamily domain-containing protein 6; Human Major facilitator superfamily ...
43-152 4.69e-07

Major facilitator superfamily domain-containing protein 6; Human Major facilitator superfamily domain-containing protein 6 (MFSD6) is also called macrophage MHC class I receptor 2 homolog (MMR2). It has been postulated as a possible receptor for human leukocyte antigen (HLA)-B62. MFSD6 is conserved through evolution and appeared before bilateral animals. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340893 [Multi-domain]  Cd Length: 375  Bit Score: 51.43  E-value: 4.69e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  43 YGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGIT-GATGAACASAMSDV 121
Cdd:cd17335  235 IGLLWTVGVVSEIPFFFFSSRLIQRFGHVGLLYLGLLAYVVRWLLYSFLENPWLVLPIELLHGLTfALVWAAAVSYASAA 314
                         90       100       110
                 ....*....|....*....|....*....|..
gi 505244445 122 TPAKNRTRYFGFLSGA-FGVGLIIGPMLGGLL 152
Cdd:cd17335  315 APPGLRATAQGLLQGLyFGLGGGLGSLIGGYL 346
MFS_1 pfam07690
Major Facilitator Superfamily;
215-386 6.33e-07

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 50.88  E-value: 6.33e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  215 LATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMSLAVLGVLHIFFQaIVAGKLAQKWGEKTTIMISMSIDMMGCLLLA 294
Cdd:pfam07690   2 FLAAFLAALGRSLLGPALPLLLAEDLGISPTEIGLLLTLFSLGYALAQ-PLAGRLSDRFGRRRVLLIGLLLFALGLLLLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  295 WIGHVWVILPALICLAAG-GMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYsvAYWDGLLWLMG 373
Cdd:pfam07690  81 FASSLWLLLVLRVLQGLGaGALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASL--FGWRAAFLILA 158
                         170
                  ....*....|...
gi 505244445  374 AILYAMLLITAYF 386
Cdd:pfam07690 159 ILSLLAAVLLLLP 171
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
58-152 9.84e-07

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 50.28  E-value: 9.84e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  58 APILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGI-TGATGAACASAMSDVTPAKNRTRYFGFLSG 136
Cdd:cd17365   51 ALLAGPLADRFGRKRVLLVSVALFGLFTLLTAFAQSVLQLALLRFLTGLgLGAAMPNAITLVSEYAPARRRSLAVTLMFC 130
                         90
                 ....*....|....*.
gi 505244445 137 AFGVGLIIGPMLGGLL 152
Cdd:cd17365  131 GYPLGAALGGFLAAAL 146
MFS_YxiO_like cd17482
Bacillus subtilis YxiO, Listeria monocytogenes BtlA, and similar transporters of the Major ...
44-386 1.23e-06

Bacillus subtilis YxiO, Listeria monocytogenes BtlA, and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis MFS-type transporter YxiO, and similar proteins including Listeria monocytogenes BtlA. The function of B. subtilis YxiO is still unknown, and L. monocytogenes BtlA is a putative secondary transporter involved in bile tolerance and general stress resistance. This family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341035 [Multi-domain]  Cd Length: 362  Bit Score: 49.91  E-value: 1.23e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  44 GVLLTLYATMQVIFAPILGRLSDKYGRKPILL--FSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAAC--ASAMS 119
Cdd:cd17482   42 GYANSIASLVIALLAPILGAIADYSGRKKRFLafFCLIGVVSTALLFFVTPGQWLLALLLFILANIGFSGANVfyDAFLP 121
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 120 DVTPAKNRTRY------FGFLSG----AFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILlilsllffretqkrealv 189
Cdd:cd17482  122 DVASPERMDRVsslgyaLGYIGGgllfAVNLVLILGPDAFGLDTAEAVRLSFLSVALWWALF------------------ 183
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 190 anrtpenqtasntvTVFFKKSLYFWLATYFIIQLIGqipaTIWVLFTQY---RFDWNTTSIGMSLAVLGVLHIFFqAIVA 266
Cdd:cd17482  184 --------------SIPLKQLLLFLIAYFFYIDGVQ----TIIRMATIYgaeEGKLGSSALILALLLTQFVAFPG-ALLF 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 267 GKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWV--ILPALICLAAGGMgQPALQGYLSKSVDDNAQGKLQGTLVSLTN 344
Cdd:cd17482  245 GWLAERFGAKRAILVSLVIYILICIYAYFMLTAWDfwILAALIGLVQGGI-QALSRSLFGRLIPKGKSAEFFGFYNISGK 323
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|..
gi 505244445 345 ITGIIGPLLFAFIYsysvaywdgllWLMGAILYAMLLITAYF 386
Cdd:cd17482  324 FAAIIGPLLFGLIT-----------QLTGSSRYGILSLIVLF 354
MFS_2 pfam13347
MFS/sugar transport protein; This family is part of the major facilitator superfamily of ...
16-364 1.24e-06

MFS/sugar transport protein; This family is part of the major facilitator superfamily of membrane transport proteins.


Pssm-ID: 433134 [Multi-domain]  Cd Length: 427  Bit Score: 50.39  E-value: 1.24e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445   16 AIGIGLIMPVLPTLLNEFVSENS--LATHYGVLLTLYATMQVIFAPILGRLSDK----YGR-KPILLFSLLGAALDYLLM 88
Cdd:pfam13347   6 ALAAGIKYAGLATYLLYFYTDVLglSAAAVGLVLLVARLVDAFTDPIVGHIIDRtrtrWGRrRPWLLLSAIILAVSFILL 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445   89 A------FSTTLWMLYIGRIIAGI--TGATGAACASAMSDVTPAKNRTRYFGF-----LSGAFGVGLIIGPMLGGLLGD- 154
Cdd:pfam13347  86 FtppelgRAPLFIWLLATYILLRIayTFFEIPYWSLGPELTRDYDERTSLTSYrsffsVGGGLLAAALAFPLVLILGGTg 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  155 ISAHMPFIFAAISHSILLILSLLFFRETQKREALVANRTPENQTASNT---VTVFFKKSLYFWLATYFIIQLIGQIPATI 231
Cdd:pfam13347 166 LERKGYRIFALIGAVLMLLGVIITAAGTKERVSMRSKEDTGQKEAGSLldmLKEVFRNRAFLILLASFLLAALAMGVLNG 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  232 WVLFTqYRFDWNTTSIGMSLAVLGVLHIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGcLLLAWIGHVWVILPALICLAA 311
Cdd:pfam13347 246 LLLYY-FRYVLGNGFAASAFPLVFTIGALLGIPLWPPLAKRIGKKNTYILGALITIAG-FALALLLGPNNTLLFLVLYII 323
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  312 GGMGQPALQGY----LSKSVDDNA---QGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAY 364
Cdd:pfam13347 324 IGFGYGSSFFLpwsmLADVVDYGElrtGKRREGTFFAMWSFISKLATGVGLGVSGLLLSA 383
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
20-303 1.72e-06

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 49.48  E-value: 1.72e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  20 GLIMPVLPTLLNEFVSENSLAthyGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYI 99
Cdd:cd17478   13 GFLPALLPLLIAKLGLSYAQA---GLLVSVFSITSSLLQPLFGYLADRKPRRYLLPLGPLLTGLGLSLLGFAPNYWLLLL 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 100 GRIIAGITGATGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFF 179
Cdd:cd17478   90 LVALAGIGSAAFHPEGARLASQAAGGRRGLAMSIFSVGGNLGFALGPLIAAALVALFGGLGLLILLIIPGLAVALLLLRL 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 180 RETQKREALVANRTPENQTASN---------TVTVFFKKSLYFWLATYFIIQLIGQIpatiwvlftqyrfdWNTTSIGMS 250
Cdd:cd17478  170 RPLKKPEAKKAAAKSSARSTLKgvwrallllLIIVFLRSWVLSSLTTFLPFYLVQRG--------------YSLVFAGLL 235
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 505244445 251 LAVLGVLHIFFQaIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVIL 303
Cdd:cd17478  236 LSLFLFAGAIGT-LIGGPLSDRFGRRRVIIASLLLAAPFLLLFLLTPGIWSYI 287
PRK12307 PRK12307
MFS transporter;
48-144 2.00e-06

MFS transporter;


Pssm-ID: 237051 [Multi-domain]  Cd Length: 426  Bit Score: 49.54  E-value: 2.00e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  48 TLYATMQVIFAPI----LGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAACASAMSDVTP 123
Cdd:PRK12307  56 AFLATAAFIGRPFggalFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESW 135
                         90       100
                 ....*....|....*....|..
gi 505244445 124 AKN-RTRYFGFLSGAFGVGLII 144
Cdd:PRK12307 136 PKHlKSKASAFLVSGFGIGNII 157
MFS_SLC46A1_PCFT cd17449
Solute carrier family 46 member 1, also called Proton-coupled folate transporter, of the Major ...
60-384 2.35e-06

Solute carrier family 46 member 1, also called Proton-coupled folate transporter, of the Major Facilitator Superfamily of transporters; Solute carrier family 46 member 1 (SLC46A1) is also called proton-coupled folate transporter (PCFT), G21, or heme carrier protein 1 (HCP1). It functions in two ways: as an intestinal proton-coupled high-affinity folate transporter that facilitates the absorption of folates across the brush-border membrane of the small intestine; and as an intestinal heme transporter which mediates heme uptake from the gut lumen into duodenal epithelial cells. It displays a higher affinity for folate than heme. It is also expressed in the choroid plexus and is required for transport of folates into the cerebrospinal fluid. Loss of function mutations in the SLC46A1 gene results in the autosomal recessive disorder "hereditary folate malabsorption" (HFM), characterized by severe systemic and cerebral folate deficiency. SLC46A1 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341007 [Multi-domain]  Cd Length: 425  Bit Score: 49.42  E-value: 2.35e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  60 ILGRLSDKYGRKPILLFSLLG----AALDYLLMAFSTTLWMLYIGRIIAGITGATG---AACASAMSDVTPAKNRTRYFG 132
Cdd:cd17449   84 LLGPWSDSVGRRPVLILPSLGlalqAAVYLLVMYLQLHVAYFLIGRILSGLLGDFNgilAGCFAYVADVSDRRSRTFRVA 163
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 133 FLSGAFGVGLIIGPMLGGLLGDISAHM-PFIFAAISHSILLILSLLFFRETQKREALVANRTPENQTAsntVTVFF---- 207
Cdd:cd17449  164 VLEACLGLAGMLASIIGGQWRKAQGYInPFWLVLALNLAAALYAAFCVGESVKEPKSARLFTTRHHQS---VVRLYvapa 240
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 208 ----KKSLYFWLATYFIIQLIGQIPATIWVLFT-QYRFDWNTTSIGMSLAvlgVLHIFFQAIVAG-KLAQKWGEKTTI-M 280
Cdd:cd17449  241 pngsRRKLALYSLALFVVVTVHFGAKDLLVLYElSSPLCWDSDLIGYGSA---AEHLTYLSSLLGlRLLQLCLEDTWVaE 317
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 281 ISMSIDMMGCLLLAWIGHVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSY 360
Cdd:cd17449  318 IGLISNISGLVVISVATTTPLMFTGYGLLFLSMATTPVIRAKLSKLVRETEQGALFASVACVEGLCSLVATGIFNSLYPA 397
                        330       340
                 ....*....|....*....|....
gi 505244445 361 SVAYWDGLLWLMGAilyAMLLITA 384
Cdd:cd17449  398 TLHFMKGFPFLFGA---ALLLIPA 418
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
58-149 3.15e-06

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 49.24  E-value: 3.15e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445   58 APILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAACA-SAMSDVTPAKNRtRYFGFLSG 136
Cdd:TIGR00898 144 SFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAvVLNTEFLPKKQR-AIVGTLIQ 222
                          90
                  ....*....|....
gi 505244445  137 -AFGVGLIIGPMLG 149
Cdd:TIGR00898 223 vFFSLGLVLLPLVA 236
PRK11102 PRK11102
Bcr/CflA family multidrug efflux MFS transporter;
17-206 5.14e-06

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182964 [Multi-domain]  Cd Length: 377  Bit Score: 47.99  E-value: 5.14e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  17 IGIGLIMPVLPTLLNEF-VSENSLAThygvLLTLY----ATMQVIFAPilgrLSDKYGRKPILLFSLLGAALDYLLMAFS 91
Cdd:PRK11102   5 LAIDMYLPALPVIAADFgVSAGSVQM----TLSAYilgfAIGQLFYGP----MADSFGRKPVILGGTLVFALAAVACALA 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  92 TTLWMLYIGRIIAGITGATGAACASA-MSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGD-ISAHMPFIFAAISHS 169
Cdd:PRK11102  77 QTIDQLIYMRFLHGLAAAAASVVINAlMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVwFSWHAIFWVLALAAI 156
                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 505244445 170 ILLILSLLFFRETQKREalvaNRTP--ENQTASNTVTVF 206
Cdd:PRK11102 157 LAAALVFFFIPETLPKE----RRQPfhLRTTIRNFASLF 191
MFS_XylE_like cd17359
D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This ...
55-150 8.40e-06

D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340917 [Multi-domain]  Cd Length: 383  Bit Score: 47.56  E-value: 8.40e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  55 VIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGI-TGATGAACASAMSDVTPAKNRTRY--- 130
Cdd:cd17359   50 AIGALFAGRLADRFGRRKTLLISAVLFFISALGSAFSPNFTIFIIARIIGGLaVGGASALVPMYIAEVAPAEIRGRLvsl 129
                         90       100
                 ....*....|....*....|....*.
gi 505244445 131 ------FGFLsGAFGVGLIIGPMLGG 150
Cdd:cd17359  130 nqlmivFGQL-LAYIVNYLIANAGGA 154
MFS_TRI12_like cd06179
Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; ...
48-153 1.02e-05

Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; This family includes Fusarium sporotrichioides trichothecene efflux pump (TRI12), which may play a role in F. sporotrichioides self-protection against trichothecenes. TRI12 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340868 [Multi-domain]  Cd Length: 518  Bit Score: 47.62  E-value: 1.02e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  48 TLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAACASAMSDVTPAKNR 127
Cdd:cd06179   39 TAWSLAQAVLGPIVGRLSDLFGRRWFFIGGNLLGVVGSIVAGTAKSVNMLIGGQALIGIGAGTQGLGAAVASELVPNKYR 118
                         90       100
                 ....*....|....*....|....*.
gi 505244445 128 tryfGFLSGAFGVGLIIGPMLGGLLG 153
Cdd:cd06179  119 ----GLVQGVVNLVASPGSALGPLIA 140
MFS_GLUT_like cd17315
Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator ...
62-314 1.12e-05

Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily; This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340873 [Multi-domain]  Cd Length: 365  Bit Score: 47.18  E-value: 1.12e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  62 GRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGI-TGATGAACASAMSDVTPAKNRTRYFGFLSGAFGV 140
Cdd:cd17315   55 GPLADRFGRRKSLLIAAVLYVIGALLSALAPNVWVLIVGRFLLGLgVGLASVLVPLYISEIAPAKIRGALGTLNQLMITF 134
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 141 GLIIGPMLGGLLGDISAH-MPFIFAAISHSILLILSLLFFretqkrealvanrTPENQTASNTVTVFFkkslyfwlatyf 219
Cdd:cd17315  135 GILLAYLLGLALSLSPPGwWRLMFALAAVPALLQLLLMFF-------------LPESRALLVGVGLQL------------ 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 220 IIQLIGqIPATIWVLFTQYRFDWNTTSIGMSLAVLGVLHIFFqAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHV 299
Cdd:cd17315  190 LQQLTG-INAVMYYAPTIFKSAGGGTASILASIIVGVVNLLA-TLVAIRLVDKVGRRPLLLIGFAGMAASLLLLAIAFLL 267
                        250
                 ....*....|....*
gi 505244445 300 WVILPALICLAAGGM 314
Cdd:cd17315  268 PALAKAAGWLALLGI 282
2A0104 TIGR00881
phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, ...
28-365 1.21e-05

phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273319 [Multi-domain]  Cd Length: 379  Bit Score: 46.99  E-value: 1.21e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445   28 TLLNEFVSENSL-ATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGI 106
Cdd:TIGR00881  16 LAMPYLVEEIGLsKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGI 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  107 -TGATGAACASAMSDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDI--SAHMPFIFAAISHSILLILSLLFFRETQ 183
Cdd:TIGR00881  96 fQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAElySWHWVFIVPGIIAIIVSLICFLLLRDSP 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  184 KREAL----------VANRTPENQTASNTVTVFFKKSLyfwlatyFIIQLIGQIPATIWVLFTQYRF-DWN----TTSIG 248
Cdd:TIGR00881 176 QSCGLppaeempneePDGDAEKKEEELTKKQIFLQYVL-------LNKVLWYISLGYVFVYVVRTGIlDWSplylTQEKG 248
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  249 MSLAVLGVLHIFFQ------AIVAGKLAQKW--GEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAGGMGQPALQ 320
Cdd:TIGR00881 249 FSKEKASWAFTLYElgglvgTLLAGWLSDKLfnGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQ 328
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 505244445  321 GYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYW 365
Cdd:TIGR00881 329 MLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGF 373
MFS_MT3072_like cd17475
Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar ...
40-382 1.49e-05

Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar transporters of the Major Facilitator Superfamily; This family includes the Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341028 [Multi-domain]  Cd Length: 378  Bit Score: 46.85  E-value: 1.49e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  40 ATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATgaacasams 119
Cdd:cd17475   30 LAQVGLLLSALNLGVAVSMLPAGWLLDRFGERRVLAVGLLLMGAAALLMALVGSYPVLLVLLFLVGAGYGS--------- 100
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 120 dVTPAKNR--TRYF-----GFLSGAFGVGLIIGPMLGGLL-----GDISAHMPFIFAAISHSILLILSLLFFREtQKREA 187
Cdd:cd17475  101 -VQPGGGRaiMRWFpprerGLAMGIRQTGVPLGGALAAALlpplaLHYGWRAAFVVAGLVSILAAVLFWLFYRE-PPAAS 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 188 LVANRTPENQTASNTVTvffkKSLYFWLATYFIIQLIGQIPA--TIWVLFTQYRFDWNTTSIGMSLAVLGVLHIFFQaIV 265
Cdd:cd17475  179 AATESASTLLRSLKEVL----RNRDVWLIAIAGALLVAPQFAllTFLLLFLHDHLGLSVVAAGALLAVAQLGGALGR-IG 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 266 AGKLAQKW--GEKTTIMISMSIDMMGCL----LLAWIGHVWVILPALICLAAGGMG-QPALQGYLSKSVDDNAQGKLQGT 338
Cdd:cd17475  254 LGRVSDRVfgGRRRPVLVITAAIAAAALlvlsLLSPGTPLWLLVLLLILLGLFAIGwNGLYLTLVAESAGPEQAGTALGL 333
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....
gi 505244445 339 LVSLTNITGIIGPLLFAFIYSYSVAYWDGLLWLMGAILYAMLLI 382
Cdd:cd17475  334 ANTINFIGIAIGPPLFGLLVDATHSYAPAWLALALLLVLAALLL 377
MFS_MFSD6 cd17335
Major facilitator superfamily domain-containing protein 6; Human Major facilitator superfamily ...
44-387 1.69e-05

Major facilitator superfamily domain-containing protein 6; Human Major facilitator superfamily domain-containing protein 6 (MFSD6) is also called macrophage MHC class I receptor 2 homolog (MMR2). It has been postulated as a possible receptor for human leukocyte antigen (HLA)-B62. MFSD6 is conserved through evolution and appeared before bilateral animals. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340893 [Multi-domain]  Cd Length: 375  Bit Score: 46.42  E-value: 1.69e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  44 GVLLTLYATMQVIFAPILGRLSDKYG-RKPILLFSLLGAALDYLLMAF-STTLWMLYIGRIIagitGATGAACASAMSDV 121
Cdd:cd17335   35 GILIGIRPFVRFLSAPLWGALADRFGkRKALLLLSLLAAVLFFLSLFFvAQIFWLLLLLVIL----GAFFSAPVVPLVDS 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 122 TP----AKNRTRY--------FGFLSGAFGVGLIIGPMlgglLGDISAHMPFIFAAISHSILLILSLLFfretqkrealv 189
Cdd:cd17335  111 ITlqylGEERERYgkqrlwgsIGFGIAALLVGILIDRS----STYKNYTIAFYVFAVLMLLALLLALKF----------- 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 190 anRTPENQTASNTVTVFFKKSLYFW--LATYFIIQLIGQIPATIWVLFTQYRFD--WNTTSIGMSLAVLGVLHIFFQAiV 265
Cdd:cd17335  176 --PFRPKHPEPNENTGGLLALLRNPrvLAFLLVAFLMGFGHGLIYSFLFWHLQDlgGSKTLIGLLWTVGVVSEIPFFF-F 252
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 266 AGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALI--CLAAGGMgQPALQGYLSKSVDDNAQGKLQGTLVSLT 343
Cdd:cd17335  253 SSRLIQRFGHVGLLYLGLLAYVVRWLLYSFLENPWLVLPIELlhGLTFALV-WAAAVSYASAAAPPGLRATAQGLLQGLY 331
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*
gi 505244445 344 N-ITGIIGPLLFAFIYSYSVAYWDGLLWLMGAIlyAMLLITAYFH 387
Cdd:cd17335  332 FgLGGGLGSLIGGYLYEAFGARTTFRFFAIAAL--AGLLAFFLIQ 374
emrD PRK11652
multidrug transporter EmrD;
24-187 1.80e-05

multidrug transporter EmrD;


Pssm-ID: 183259 [Multi-domain]  Cd Length: 394  Bit Score: 46.44  E-value: 1.80e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  24 PVLPTLLNEF-VSENSLATHYGVLLTLYATMQVIFAPilgrLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRI 102
Cdd:PRK11652  29 PAIADMARDLnVREGAVQAVMAAYLLTYGLSQLFYGP----LSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASA 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 103 IAGItgatGAACASAMSDVTPaknRTRYFG--------FLSGAFGVGLIIGPMLGGLLGDI-SAHMPFIFAAISHSILLI 173
Cdd:PRK11652 105 IQGL----GTGVGGVMARTLP---RDLYEGtqlrhansLLNMGILVSPLLAPLIGGLLTTLfGWRACYLFLLLLGAGVTF 177
                        170
                 ....*....|....
gi 505244445 174 LSLLFFRETQKREA 187
Cdd:PRK11652 178 SMARWMPETRPADA 191
TRI12 pfam06609
Fungal trichothecene efflux pump (TRI12); This family consists of several fungal specific ...
26-163 2.26e-05

Fungal trichothecene efflux pump (TRI12); This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster.It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes.


Pssm-ID: 115279 [Multi-domain]  Cd Length: 598  Bit Score: 46.58  E-value: 2.26e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445   26 LPTLLNEF-VSENSlathyGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFS----LLGAALDYLLMAFSTTLWMLYIG 100
Cdd:pfam06609  67 LPNILQDIgQSENQ-----GLFSTLWTMGQAVSILMMGRLTDRFGRRPFVIAThiigLVGAIVGCTANKFNTLLAAMTLL 141
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 505244445  101 RIIAGITGATGAACASAMSdvtpakNRTRYFGFLSGAFGVGLI--IGPMLGGLLGdISAHMPFIF 163
Cdd:pfam06609 142 GVAAGPAGASPLFIGELMS------NKTKFLGLLIVSAPTIAMngAGPYFGQRLA-IQGNWRWIF 199
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
26-151 2.46e-05

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 46.01  E-value: 2.46e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  26 LPTLLNEFVSENSLAthyGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFsTTLWMLYIGRIIAG 105
Cdd:cd17478  218 LPFYLVQRGYSLVFA---GLLLSLFLFAGAIGTLIGGPLSDRFGRRRVIIASLLLAAPFLLLFLL-TPGIWSYILLVLAG 293
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 505244445 106 -ITGATGAACASAMSDVTPaknrtRYFGFLSG-----AFGVGLIIGPMLGGL 151
Cdd:cd17478  294 fLLFASFPVTVVLAQELLP-----GNVGLASGlmmglSFGLGGIGAPVLGAL 340
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
201-395 2.71e-05

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 45.74  E-value: 2.71e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 201 NTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQyRFDWNTTSIGMSLAVLGVLHIFFQaIVAGKLAQKWGEKTTIM 280
Cdd:COG2814    2 PATPRRRWLALLALALGAFLSGLGIGIVLPALPLIAA-DLGASPAQAGLVVTAYLLGAALGA-PLAGRLADRFGRRRVLL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 281 ISMSIDMMGCLLLAWIGHVWVILPALICLAAG-GMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYS 359
Cdd:COG2814   80 LGLLLFALGSLLCALAPSLWLLLAARFLQGLGaGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLAD 159
                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 505244445 360 YsvAYWDGLLWLMgAILYAMLLITAYFHQRKTTPKA 395
Cdd:COG2814  160 L--FGWRWVFLVN-AVLALLALLLLLRLLPESRPAA 192
MFS_OPA_SLC37 cd17312
Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of ...
44-182 2.83e-05

Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of transporters; Organophosphate:Pi antiporters (OPA) are integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The OPA family is also called solute carrier family 37 (SLC37) in vertebrates. Members include glucose-6-phosphate (Glc6P) transporter (also called translocase or exchanger), glycerol-3-phosphate permease, 2-phosphonopropionate transporter, phosphoglycerate transporter, as well as membrane sensor protein UhpC from Escherichia coli. UhpC is both a sensor and a transport protein; it recognizes external Glc6P and induces transport by UhpT, and it can also transport Glc6P. Vertebrates contain four SLC37 or sugar-phosphate exchange (SPX) proteins: SLC37A1 (SPX1), SLC37A2 (SPX2), SLC37A3 (SPX3), and SLC37AA4 (SPX4). The OPA/SLC37 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340870 [Multi-domain]  Cd Length: 364  Bit Score: 45.73  E-value: 2.83e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  44 GVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAACAS-AMSDVT 122
Cdd:cd17312   41 GIIGSAFLIAYAVGKFISGFLSDRSNIRRFMSAGLLLSALANIFMGFSTSLWFFAVLWGLNGLFQSMGWPPCVkLLGNWF 120
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 505244445 123 PAKNRTRYFGFLSGAFGVGLIIGPML-GGLLGDISAHMPFIFAAISHSILLILSLLFFRET 182
Cdd:cd17312  121 SKKERGTVYGIWSTSHNFGGILAPILaASLASYYGWRAAFLVPGIVGLVVAIILFFFLRDS 181
MFS_SLC22 cd17317
Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major ...
48-154 3.14e-05

Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily; The Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340875 [Multi-domain]  Cd Length: 331  Bit Score: 45.65  E-value: 3.14e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  48 TLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAACASAMS-DVTPAKN 126
Cdd:cd17317   32 TIFFLGVLIGSLLFGYLADRFGRRPVLLLGLVLQIVCGVLSAFSPSYELFLVLRFLVGVTSAGIFTVGFVLGmEIVGPKY 111
                         90       100
                 ....*....|....*....|....*...
gi 505244445 127 RTRYFGFLSGAFGVGLIIGPMLGGLLGD 154
Cdd:cd17317  112 RSFVGILFGLFWALGYMLLALLAYLIRD 139
PRK03893 PRK03893
putative sialic acid transporter; Provisional
60-144 4.02e-05

putative sialic acid transporter; Provisional


Pssm-ID: 179668 [Multi-domain]  Cd Length: 496  Bit Score: 45.46  E-value: 4.02e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  60 ILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGI--TGATGAACASAMsDVTPAKNRTRYFGFLSGA 137
Cdd:PRK03893  74 LLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMgmAGEYGSSATYVI-ESWPKHLRNKASGFLISG 152

                 ....*..
gi 505244445 138 FGVGLII 144
Cdd:PRK03893 153 FSIGAVV 159
MFS_GLUT6_Class3 cd17434
Glucose transporter type 6, a Class 3 GLUT, of the Major Facilitator Superfamily of ...
64-114 4.07e-05

Glucose transporter type 6, a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 6 (GLUT6) is also called Solute carrier family 2, facilitated glucose transporter member 6 (SLC2A6). It is classified as a Class 3 GLUT protein, and is a facilitative glucose transporter that binds cytochalasin B with low affinity. It is found in the brain, spleen, and leucocytes. GLUT6 may function in oxalate secretion. SLC2A6 has been identified as an oxalate nephrolithiasis gene in mice; its deletion causes spontaneous calcium oxalate nephrolithiasis in the setting of hyperoxalaemia, hyperoxaluria, and nephrocalcinosis. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340992 [Multi-domain]  Cd Length: 417  Bit Score: 45.59  E-value: 4.07e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 505244445  64 LSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAAC 114
Cdd:cd17434   64 LNDRLGRKLSIMFSAVPSALGYLLMGSAQGIWMLLLGRFLTGFAGGITAAS 114
MFS_SLC22A1_2_3 cd17379
Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, ...
60-148 4.23e-05

Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, and 3) of the Major Facilitator Superfamily of transporters; This sufamily includes solute carrier family 22 member 1 (SLC22A1, also called organic cation transporter 1 or OCT1), SLC22A2 (or OCT2), SLC22A3 (or OCT3), and similar proteins. OCT1-3 have similar basic functional properties: they are able to translocate a variety of structurally different organic cations in both directions across the plasma membrane; to translocate organic cations independently from sodium, chloride or proton gradients; and to function as electrogenic uniporters for cations or as electroneutral cation exchangers. They show overlapping but distinct substrate and inhibitor specificities, and different tissue expression pattern. In humans, OCT1 is strongly expressed in the liver, OCT2 is highly expressed in the kidney where it is localized at the basolateral membrane of renal proximal tubules, and OCT3 is most strongly expressed in skeletal muscle. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. The SLC22A1-3 subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340937 [Multi-domain]  Cd Length: 340  Bit Score: 45.03  E-value: 4.23e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  60 ILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITG-ATGAACASAMSDVTPAKNRtRYFGFLSG-A 137
Cdd:cd17379   52 VIGYLADRFGRKVCFLISILGNGVSGVLMAFSPNYPWFLIFRFLQGLFGkGGWMTGYVLVTEFVGSKYR-RTVGIVYQmF 130
                         90
                 ....*....|.
gi 505244445 138 FGVGLIIGPML 148
Cdd:cd17379  131 FTLGLLILPGI 141
MFS_GLUT_Class1_2_like cd17357
Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This ...
28-163 5.82e-05

Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This subfamily includes Class 1 and Class 2 glucose transporters (GLUTs) including Solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1, also called glucose transporter type 1 or GLUT1), SLC2A2-5 (GLUT2-5), SLC2A7 (GLUT7), SLC2A9 (GLUT9), SLC2A11 (GLUT11), SLC2A14 (GLUT14), and similar proteins. GLUTs are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-5 are the most thoroughly studied and are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340915 [Multi-domain]  Cd Length: 447  Bit Score: 44.94  E-value: 5.82e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  28 TLLNEFVSENSLATH---YGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFS---TTLWMLYIGR 101
Cdd:cd17357   33 TLVDRYGLNLSDSELdllWSLIVSIFFIGGAIGSFISAFLANRFGRKNGLLISNALLVVSSLLMFLSksaKSPELLIFGR 112
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 505244445 102 IIAGI-TGATGAACASAMSDVTPAKNRtryfGFLSGAFGVGLIIGPMLGGLLGdisahMPFIF 163
Cdd:cd17357  113 FLVGIaCGLSTGFVPMYLQEISPSELR----GALGSLTQIGVTLGILLGQVFG-----LPSVL 166
MFS_HXT cd17356
Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and ...
60-149 6.17e-05

Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and similar proteins; The fungal hexose transporter (HXT) subfamily is comprised of functionally redundant proteins that function mainly in the transport of glucose, as well as other sugars such as galactose and fructose. Saccharomyces cerevisiae has 20 genes that encode proteins in this family (HXT1 to HXT17, GAL2, SNF3, and RGT2). Seven of these (HXT1-7) encode functional glucose transporters. Gal2p is a galactose transporter, while Rgt2p and Snf3p act as cell surface glucose receptors that initiate signal transduction in response to glucose, functioning in an induction pathway responsible for glucose uptake. Rgt2p is activated by high levels of glucose and stimulates expression of low affinity glucose transporters such as Hxt1p and Hxt3p, while Snf3p generates a glucose signal in response to low levels of glucose, stimulating the expression of high affinity glucose transporters such as Hxt2p and Hxt4p. Schizosaccharomyces pombe contains eight GHT genes (GHT1-8) belonging to this family. Ght1, Ght2, and Ght5 are high-affinity glucose transporters; Ght3 is a high-affinity gluconate transporter; and Ght6 high-affinity fructose transporter. The substrate specificities for Ght4, Ght7, and Ght8 remain undetermined. The HXT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340914 [Multi-domain]  Cd Length: 403  Bit Score: 44.93  E-value: 6.17e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  60 ILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLW-MLYIGRIIAGI-TGATGAACASAMSDVTPAKNRtryfGFLSGA 137
Cdd:cd17356   64 ISSFLSDRIGRKKSIQIGCVIYIIGAIIQVAAIGKWyQLIVGRIIAGLgVGFASVLVPVYQSEVAPKHIR----GTLVSL 139
                         90
                 ....*....|..
gi 505244445 138 FGVGLIIGPMLG 149
Cdd:cd17356  140 YQLAITIGILVA 151
SP TIGR00879
MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of ...
43-153 6.65e-05

MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273317 [Multi-domain]  Cd Length: 481  Bit Score: 45.02  E-value: 6.65e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445   43 YGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLM---AFSTTLWMLYIGRIIAGItGATGAACASAM- 118
Cdd:TIGR00879  73 WGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMglaAFALSVEMLIVGRVLLGI-GVGIASALVPMy 151
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 505244445  119 -SDVTPAKNRtryfGFLSGAFGVGLIIGPMLGGLLG 153
Cdd:TIGR00879 152 lSEIAPKALR----GALTSLYQLAITFGILVAYGFG 183
MFS_HMIT_like cd17360
H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; ...
56-129 7.75e-05

H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of myo-inositol/inositol transporters and similar transporters from vertebrates, plant, and fungi. The human protein is called H(+)-myo-inositol cotransporter/Proton myo-inositol cotransporter (HMIT), or H(+)-myo-inositol symporter, or Solute carrier family 2 member 13 (SLC2A13). HMIT is classified as a Class 3 GLUT (glucose transporter) based on sequence similarity with GLUTs, but it does not transport glucose. It specifically transports myo-inositol and is expressed predominantly in the brain, with high expression in the hippocampus, hypothalamus, cerebellum and brainstem. HMIT may be involved in regulating processes that require high levels of myo-inositol or its phosphorylated derivatives, such as membrane recycling, growth cone dynamics, and synaptic vesicle exocytosis. Arabidopsis Inositol transporter 4 (AtINT4) mediates high-affinity H+ symport of myo-inositol across the plasma membrane. The HMIT-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340918 [Multi-domain]  Cd Length: 362  Bit Score: 44.57  E-value: 7.75e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 505244445  56 IFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGItgATGAACASA---MSDVTPAKNRTR 129
Cdd:cd17360   50 VGAAIGGWLNDRFGRRPCILLADALFTIGAIVMAAAPNKEVLIVGRVLVGL--GVGIASMTVplyIAEAAPPRIRGR 124
PRK11043 PRK11043
Bcr/CflA family multidrug efflux MFS transporter;
62-119 8.45e-05

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182924 [Multi-domain]  Cd Length: 401  Bit Score: 44.50  E-value: 8.45e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 505244445  62 GRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGItgatgAACASAMS 119
Cdd:PRK11043  62 GPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAV-----GVCSAAVI 114
MFS_Set cd17471
Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; ...
40-153 1.35e-04

Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; This family is composed of sugar transporters such as Escherichia coli Sugar efflux transporter SetA, SetB, SetC and other sugar transporters. SetA, SetB, and SetC are involved in the efflux of sugars such as lactose, glucose, IPTG, and substituted glucosides or galactosides. They may be involved in the detoxification of non-metabolizable sugar analogs. The Set family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341024 [Multi-domain]  Cd Length: 371  Bit Score: 43.69  E-value: 1.35e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  40 ATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGIT-GATGAACASAM 118
Cdd:cd17471  234 ESWVGLLFGLAAALEIPIMLLAGLLAKRFGKRRLLLAGFLAGVLFYLGLALATSLWQLIALQLLNAIFiGITAGLGISYF 313
                         90       100       110
                 ....*....|....*....|....*....|....*
gi 505244445 119 SDVTPAKnrtryFGFLSGAFGVGLIIGPMLGGLLG 153
Cdd:cd17471  314 QDLMPGQ-----PGLATTLYSNASRIGSLLGGLLA 343
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
40-165 1.55e-04

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 43.37  E-value: 1.55e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  40 ATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAACASA-M 118
Cdd:cd06173  243 AAGYGLLLAAFGVGALLGALLLGRLSKRRRRGRLLLIGALLLGLALLVLGLSPSLWLLLAALFLLGLAGGLFNVPLNTlL 322
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 505244445 119 SDVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGD-ISAHMPFIFAA 165
Cdd:cd06173  323 QLRVPDELRGRVFSVYNALNSGAMPLGALLAGLLADaLGLSAVFLLAG 370
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
233-394 1.59e-04

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 43.37  E-value: 1.59e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 233 VLFTQYRFDWNTTSIGMSLAVLGVLHIFFqAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICL-AA 311
Cdd:cd17329   23 AIYLHQQLGLSASIVGLVLALSAVAGIVA-SLIGGRLADRFGRKPVMLAGLLLRALGFALLGFAHSPWLFAIALVLTgFG 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 312 GGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSYSVAYwdglLWLMGAILYAMLLITAYFHQRKT 391
Cdd:cd17329  102 GGLFEPASEAMIADVTTPENRTRAFSLLYWAINLGVAIGPLLGGLLLLYSFRL----LFLAAAVLFLLAALVLLFLLPET 177

                 ...
gi 505244445 392 TPK 394
Cdd:cd17329  178 RPK 180
MFS_MelB_like cd17332
Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major ...
55-320 1.79e-04

Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily; This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340890 [Multi-domain]  Cd Length: 424  Bit Score: 43.36  E-value: 1.79e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  55 VIFAPILGRLSDKY-----GRKPILLFSLLGAALDYLLM----AFSTTLWMLYIGRIIAG------ITGATGAACASAMS 119
Cdd:cd17332   49 AINDPLMGYLIDRTrsrwgRFRPWLLWGAIPLALLFVLLfttpDGSGTGKLIYALITYILldllytLVNIPYTALIPELT 128
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 120 DVTPAKNR---TRYFGFLSGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILSLLFFRETQKREALVANRTPEN 196
Cdd:cd17332  129 DDPEERTSltsWRMFFATIGGLLVTVLPPPLVAYFGGGNASRGYFLTALIIGIIGIILLLICFFGTRERVVPPEEEKSKL 208
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 197 QTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLFTQYRFDWNTTSIGMSLAVLGVLHIFFqaIVAGKLAQKWGEK 276
Cdd:cd17332  209 PLLKSLKALLKNRPFLILLLAYLLYFLAFNIVNTVLVYYFKYVLGGRAELVLLLLLILSGALLAL--LPWPPLKKRFGKK 286
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 505244445 277 TTIMISMSIDMMGCLLLAWIGH--VWVILPALICLAAGGMGQPALQ 320
Cdd:cd17332  287 KAFFIGLLLAILGLLLLFFLPPgnLVLILVLAVLAGIGYGGANLLP 332
MFS_GLUT6_8_Class3_like cd17358
Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major ...
43-294 1.79e-04

Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340916 [Multi-domain]  Cd Length: 436  Bit Score: 43.33  E-value: 1.79e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  43 YGVLLTLYATMQVIFApilGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGatGAACASA---MS 119
Cdd:cd17358   46 FGSLLTLGALIGALLS---GKLADRIGRKRTLLISAIPCILGWLLIAFAKDVWMLYLGRFLAGFGG--GAASVVVpvyIA 120
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 120 DVTPAKNRtryfGFLSGAFGVGLIIGPMLGGLLGdisAHMPFIFAAISHSI--LLILSLLFF------------RETQKR 185
Cdd:cd17358  121 EIAPKNVR----GALGSLNQLLVNIGILLGYVLG---SFLPWRTLALIGAIppVVFLILLFFipesprwlakkgREEEAE 193
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 186 EAL------------------VANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWVLF-TQYRFD--WNT 244
Cdd:cd17358  194 KSLqflrgkdadiskeaaeiqEELAELEKEAKESSFSDLFQRKYLKPLVIGLGLMLFQQLSGINAVIFyASSIFDeaGSG 273
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 505244445 245 TSIGMSLAVLGVLHIFfQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLA 294
Cdd:cd17358  274 LDPNTATIIIGVVQVV-GTLVATLLVDRLGRRPLLLVSAIGMGIGLLALG 322
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
259-395 1.90e-04

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 43.30  E-value: 1.90e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 259 IFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAG-GMGQPALQGYLSKSVDDNAQGKLqG 337
Cdd:COG0738   56 YLLASLPAGRLIDRFGYKRGLLLGLLLMALGLLLFALAPSYPLLLLALFLLGLGlGLLDVAANPYVAALGPETAASRL-N 134
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 505244445 338 TLVSLTNITGIIGPLLFA-FIYSYSVAYWDGLLWLMGAILYAMLLITAYFHQRKTTPKA 395
Cdd:COG0738  135 LLHAFFSLGALLGPLLGGlLILLGLSLSWHLPYLILAVLLLLLALLFLRSKLPEIEEEE 193
MFS_SLC17A9_like cd17380
Solute carrier family 17 member 9 and similar proteins of the Major Facilitator Superfamily of ...
50-163 1.90e-04

Solute carrier family 17 member 9 and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily includes solute carrier family 17 member 9 (SLC17A9) and similar proteins including plant inorganic phosphate transporters (PHT4) that are also probably anion transporters. SLC17A9, also called vesicular nucleotide transporter (VNUT), is involved in vesicular storage and exocytosis of ATP. It facilitates the accumulation of ATP and other nucleotides in secretory vesicles such as adrenal chromaffin granules and synaptic vesicles. It also functions as a lysosomal ATP transporter and regulates cell viability. Plant PHT4 family transporters mediate the transport of inorganic phosphate and may also transport organic anions. The Arabidopsis protein AtPHT4;4 is a chloroplast-localized ascorbate transporter. PHT4 proteins show differential expression that suggests specialized functions. The SLC17A9-like subfamily belongs to the Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340938 [Multi-domain]  Cd Length: 361  Bit Score: 43.31  E-value: 1.90e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  50 YATMQVIFapilGRLSDKYGRKPILLFSLLGAALDYLL--MAFSTTLWMLYIGRIIAGIT-GATGAACASAMSDVTPAKN 126
Cdd:cd17380   47 YALTQVLG----GYLADRFGGKKVLLLAVALWSLATLLtpLLAYSSLPLLILSRILLGLGeGVHFPSMTSLFSRWVPVSE 122
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 505244445 127 RTRYFGFLSGAFGVGLIIGPMLGGLLGDISA-HMPFIF 163
Cdd:cd17380  123 RSRAVSIVTAGSYLGTLLGGLIGPLLLEYYGwPSVFYF 160
MFS_GlpT cd17345
Glycerol-3-Phosphate Transporter of the Major Facilitator Superfamily of transporters; ...
60-165 2.27e-04

Glycerol-3-Phosphate Transporter of the Major Facilitator Superfamily of transporters; Glycerol-3-Phosphate Transporter (also called GlpT or G-3-P permease) is responsible for glycerol-3-phosphate uptake. It is part of the Organophosphate:Pi antiporter (OPA) family of integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The GlpT group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340903 [Multi-domain]  Cd Length: 411  Bit Score: 43.00  E-value: 2.27e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  60 ILGRLSDKYGRKPILLFSLLGAALDYLLMAFS----TTLWMLYIGRIIAGI-TGATGAACASAMSDVTPAKNRTRYFGFL 134
Cdd:cd17345   57 VMGNLSDRSNPKRFLAIGLILSAIINILIGFVpsatSSVGLMFILLFLNGWfQGMGWPPSGRTMVHWFSKKERGTWTSIW 136
                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 505244445 135 S-----GAFGVGLIIGPMLgGLLGDISAHMPFIFAA 165
Cdd:cd17345  137 NishnvGGGLVGPLAGLGL-AIFGDGWWRGAFIFPA 171
MFS_SLC45_SUC cd17313
Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily ...
43-157 3.08e-04

Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters; This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340871 [Multi-domain]  Cd Length: 421  Bit Score: 42.61  E-value: 3.08e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  43 YGVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAACASAM-SDV 121
Cdd:cd17313  283 GAWGLLIFSLAFLIFSLPIGKLGKKIGRKKVYLIGLVLFAVGMALMALVHNVTVALVLFALGGIGWATININPYPLvSDY 362
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 505244445 122 TPAKNRTR--YFGFLSGAFGVGLIIGPMLGGLLGDISA 157
Cdd:cd17313  363 HSESGRGQgtDTGLLNLAISLAQILVSLLAGPIIDVKG 400
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
240-386 3.99e-04

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 42.16  E-value: 3.99e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445 240 FDWNTTSIGMSLAVLGVLHIFFQaIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAG-GMGQPA 318
Cdd:COG2271   40 LGLSAAQLGLLASAFFLGYALGQ-IPAGLLADRFGRRRVLAIGLLLWGLATLLFGFATSFWQLLLLRFLLGLGeAGFFPA 118
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 505244445 319 LQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFIYSY----SVAYWDGLLWLMGAILYAMLLITAYF 386
Cdd:COG2271  119 ALKLIAEWFPPKERGRALGIFNAGGPLGGALAPPLLGWLLAAfgwrAAFLILGLPGLLLALLRFWLLALAYF 190
MFS_ARN_like cd17322
Yeast ARN family of Siderophore iron transporters and similar proteins of the Major ...
58-146 4.02e-04

Yeast ARN family of Siderophore iron transporters and similar proteins of the Major Facilitator Superfamily; The ARN family of siderophore iron transporters includes ARN1 (or ferrichrome permease), ARN2 (or triacetylfusarinine C transporter 1 or TAF1), ARN3 (or siderophore iron transporter 1 or SIT1 or ferrioxamine B permease) and ARN4 (or Enterobactin permease or ENB1). They specifically recognize siderophore-iron chelates are expressed under conditions of iron deprivation. They facilitate the uptake of both hydroxamate- and catecholate-type siderophores. This group also includes glutathione exchanger 1 (Gex1p) and Gex2p, which are proton/glutathione antiporters that import glutathione from the vacuole and exports it through the plasma membrane. The ARN family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340880 [Multi-domain]  Cd Length: 514  Bit Score: 42.30  E-value: 4.02e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  58 APILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRII--AGITGATGAACAsAMSDVTPAKNRTRYFGFLS 135
Cdd:cd17322   54 QPPYAKLSDVFGRLELFLVSLLLYVVGTIIMAASTNVQTYAAGSVFynAGYTGLNLLLTL-ILADFSSLKNRGFASAIPS 132
                         90
                 ....*....|.
gi 505244445 136 GAFGVGLIIGP 146
Cdd:cd17322  133 LPYIITTWIGG 143
PRK10091 PRK10091
MFS transport protein AraJ; Provisional
22-105 6.56e-04

MFS transport protein AraJ; Provisional


Pssm-ID: 182234 [Multi-domain]  Cd Length: 382  Bit Score: 41.62  E-value: 6.56e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  22 IMPVLPTLLNEFVSENSLATHygvLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGR 101
Cdd:PRK10091  22 IMGVLTELAHDVGISIPAAGH---MISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGR 98

                 ....
gi 505244445 102 IIAG 105
Cdd:PRK10091  99 LVSG 102
MFS_ShiA_like cd17369
Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This ...
46-165 7.73e-04

Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340927 [Multi-domain]  Cd Length: 408  Bit Score: 41.36  E-value: 7.73e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  46 LLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDY--LLMAFSTTLWMLYIGRIIAG---ITGATGAACASAMSD 120
Cdd:cd17369  269 AVLIASVVAAITIPLFGWLSDRVGRRPVYLAGALLAALFAfpFFWLLDTGSTWLIVLAAVVVlgvLHGMMYGPQAAFLAE 348
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 505244445 121 VTPAknRTRYfgflSGAfGVGLIIGPMLGGLLgdisahMPFIFAA 165
Cdd:cd17369  349 LFPT--RVRY----TGA-SLGYQLGAILGGGF------APLIATA 380
MFS_Amf1_MDR_like cd17476
Saccharomyces cerevisiae low affinity ammonium transporter Amf1p/YOR378W, aminotriazole ...
13-165 1.01e-03

Saccharomyces cerevisiae low affinity ammonium transporter Amf1p/YOR378W, aminotriazole resistance protein Atr1p, and similar transporters of the Major Facilitator Superfamily; Saccharomyces cerevisiae Amf1p/Ammonium Facilitator 1/YOR378W functions as a low affinity NH4+ transporter. S. cerevisiae aminotriazole resistance protein (Atr1p) is required for controlling sensitivity to aminotriazole; it is a putative component of the machinery responsible for pumping aminotriazole (and possibly other toxic compounds) out of the cell. This subfamily also includes S. cerevisiae YMR279C, a putative boron transporter involved in boron efflux and resistance, and Kluyveromyces lactis Knq1p which is involved in oxidative stress response and iron homeostasis. Amf1p, Atr1p, and YMR279C have been classified as group 1 members of the DHA2 (Drug:H+ Antiporter family 2) family, K. lactis Knq1 as group 2. This subfamily also includes two Aspergillus terreus terrein biosynthesis cluster proteins, efflux pump TerG and TerJ which may be required for efficient secretion of terrein or other secondary metabolites produced by the terrein gene cluster. The Amf1p-like subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341029 [Multi-domain]  Cd Length: 362  Bit Score: 41.09  E-value: 1.01e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  13 VLDAIGIGLIMPVLPTLLNEFVSENSLATHygvLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFST 92
Cdd:cd17476    8 LLNQAGLGSVIVILPIIGDSFGTSPNQLSW---LAASYSLTVGTFILIFGRLGDIYGHKKMFVIGSFWFAIWSLIAGFSP 84
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 505244445  93 TLWMLYIGRIIAGITGATGAACASAMSDVT--PAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDIsAHMPFIFAA 165
Cdd:cd17476   85 NFIFFIICRALQGLGPAFLLPNAMALLGRTypPGPRKNIVFSLFGATAPLGFALGGVFGGLFAQL-AWWPWIFWF 158
MFS_OAT cd17374
Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion ...
58-151 1.31e-03

Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion transporters (OATs) generally display broad substrate specificity and they facilitate the exchange of extracellular with intracellular organic anions (OAs). Several OATs have been characterized including OAT1-10 and urate anion exchanger 1 (URAT1, also called SLC22A12). Many OATs occur in renal proximal tubules, the site of active drug secretion. OATs mediate the absorption, distribution, and excretion of a diverse array of environmental toxins, and clinically important drugs, including anti-HIV therapeutics, anti-tumor drugs, antibiotics, anti-hypertensives, and anti-inflammatories, and therefore is critical for the survival of the mammalian species. OAT falls into the SLC22 (solute carrier 22) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340932 [Multi-domain]  Cd Length: 341  Bit Score: 40.35  E-value: 1.31e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  58 APILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAACA-SAMSDVTPAKNRTRYFGFLSG 136
Cdd:cd17374   52 ALIFGHLSDRFGRKFILLLSLLQLAIFGTCAAFAPTFPVYCVLRFLAGFAVSGISINTlILGTEWTTPRHRALAITLTSC 131
                         90
                 ....*....|....*
gi 505244445 137 AFGVGLIIgpmLGGL 151
Cdd:cd17374  132 FFSIGQML---LAGL 143
Sugar_tr pfam00083
Sugar (and other) transporter;
224-382 2.24e-03

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 39.95  E-value: 2.24e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  224 IGQIPATIWVLFTQYRFDWNT-----------TSIGMSLAVLGvlhIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLL 292
Cdd:pfam00083  16 TGVIGAFLTLIDFFKNFGLSKsvsslaalsvlSGLIVSIFSVG---CFIGSLFAGKLGDRFGRKKSLLIANVLFVIGAVL 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  293 LAWIGHVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNiTGIIGPLLFAFIYSYSVAY------WD 366
Cdd:pfam00083  93 QGAAKGKWSVYQLIVGRVLVGIGVGGASVLAPMYISEIAPKKLRGALGSLYQ-LAITFGILLAYIFGLGLNKtsnsdgWR 171
                         170
                  ....*....|....*.
gi 505244445  367 GLLWLmgAILYAMLLI 382
Cdd:pfam00083 172 IPLGL--QLVPALLLI 185
MFS_MFSD9 cd17390
Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily ...
40-165 2.51e-03

Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily domain-containing protein 9 (MFSD9) is expressed in the central nervous system (CNS) and in most peripheral tissues but at very low expression levels. The function of MFSD9 is unknown. MFSD9 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340948 [Multi-domain]  Cd Length: 350  Bit Score: 39.52  E-value: 2.51e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  40 ATHYGVLLTLYATMQVIFAPILGRLSDKYGRKPILL----FSLLGAALdyLLMAFSTTLWMLYIGRIIAGITGATGAACA 115
Cdd:cd17390  207 PKTIGYLISYSGVLGALSGFLVGRILKLYKNNEYLLllhsFILLALSL--LGLALAPSIWLLVLCLTPLSISSAVLRTCS 284
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 505244445 116 SAMS-DVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDISAHMPFIFAA 165
Cdd:cd17390  285 TSLLlSRGKSKERGTLLGVGQSVTSLARILAPLLSGLLQEFSVSGPGLLGA 335
MFS_YjiJ cd06180
Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of ...
58-157 3.42e-03

Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Escherichia coli YjiJ and other uncharacterized proteins. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340869 [Multi-domain]  Cd Length: 371  Bit Score: 39.21  E-value: 3.42e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  58 APILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAACASAMSDVTPAKNRTRYFGFLSGA 137
Cdd:cd06180  248 CFLWGALSDRWGTRRALAANLLVQAVGVLLPLLSPGPAGLVLSAVLFGGTFMAITALVMALARELAPPAAPRALALMTAS 327
                         90       100
                 ....*....|....*....|
gi 505244445 138 FGVGLIIGPMLGGLLGDISA 157
Cdd:cd06180  328 FGVGQILGPLLAGWLADATG 347
MFS_SLC22A7_OAT2 cd17447
Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major ...
58-107 3.53e-03

Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 7 (SLC22A7), also called organic anion transporter 2 (OAT2) mediates sodium-independent transport of a variety of organic anions including prostaglandin E2, prostaglandin F2, tetracycline, bumetanide, estrone sulfate, glutarate, dehydroepiandrosterone sulfate, allopurinol, 5-fluorouracil, paclitaxel, L-ascorbic acid, salicylate, ethotrexate, and alpha-ketoglutarate. It also plays a role in renal uric acid uptake from blood as a first step of tubular secretion. OAT2 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS)of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341005 [Multi-domain]  Cd Length: 341  Bit Score: 39.33  E-value: 3.53e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 505244445  58 APILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGIT 107
Cdd:cd17447   52 AVAFGYLSDRFGRKRMLLVAYVLSLVFGLASAFSVSYVMFAITRTLTGFA 101
MFS_MFSD5_like cd17487
Major facilitator superfamily domain containing 5 protein; Human major facilitator superfamily ...
49-106 4.74e-03

Major facilitator superfamily domain containing 5 protein; Human major facilitator superfamily domain containing 5 protein (MFSD5) is also called molybdate-anion transporter, or molybdate transporter 2 homolog (MOT2). It acts as an atypical solute carrier (SLC) that mediates high-affinity intracellular uptake of the rare oligo-element molybdenum. It may also play a role in maintaining the glucose homeostasis and pancreatic beta-cell proliferation, as well as in altered energy homeostasis. MFSD5 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341040  Cd Length: 385  Bit Score: 38.74  E-value: 4.74e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 505244445  49 LYAT---MQVIFAPILGRLSDKYGRKPI-LLFSLLGaALDYLLMAFStTLWMLYIGRIIAGI 106
Cdd:cd17487   43 LFVTgfgSSVVFGTFVGSLADKFGRKRAcLLFCVLY-SLSCLTKHSP-NFGVLLLGRVLGGI 102
MFS_MCT_SLC16 cd17352
Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily of transporters; ...
46-156 6.97e-03

Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily of transporters; The animal Monocarboxylate transporter (MCT) family is also called Solute carrier family 16 (SLC16 or SLC16A). It is composed of 14 members, MCT1-14. MCTs play an integral role in cellular metabolism via lactate transport and have been implicated in metabolic synergy in tumors. MCT1-4 are proton-coupled transporters that facilitate the transport across the plasma membrane of monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and ketone bodies such as acetoacetate, beta-hydroxybutyrate and acetate. MCT8 and MCT10 are transporters which stimulate the cellular uptake of thyroid hormones such as thyroxine (T4), triiodothyronine (T3), reverse triiodothyronine (rT3) and diidothyronine (T2). MCT10 also functions as a sodium-independent transporter that mediates the uptake or efflux of aromatic acids. Many members are orphan transporters whose substrates are yet to be determined. The MCT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340910 [Multi-domain]  Cd Length: 361  Bit Score: 38.30  E-value: 6.97e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  46 LLTLYATMQVIFAPILGRLSDK--YGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGIT-GATGAACASAMSDVT 122
Cdd:cd17352  223 LLSIIGISDIVGRILLGLLADKprIGRLYLYIFTLLILGLSLLAFPLATTYVGLIVFSVLFGFCsGSYSSLTPVILADLV 302
                         90       100       110
                 ....*....|....*....|....*....|....
gi 505244445 123 PAKNRTRYFGFLSGAFGVGLIIGPMLGGLLGDIS 156
Cdd:cd17352  303 GLEKLSNAYGLVLLFQGLAALVGPPIAGLLRDYT 336
MFS_CitA cd17368
Citrate-proton symporter of the Major Facilitator Superfamily of transporters; Citrate-proton ...
39-142 8.01e-03

Citrate-proton symporter of the Major Facilitator Superfamily of transporters; Citrate-proton symporter, also called citrate carrier protein or citrate transporter or citrate utilization protein A (CitA), is a proton symporter that functions in the uptake of citrate across the boundary membrane. It allows the utilization of citrate as a sole source of carbon and energy. In Klebsiella pneumoniae, the gene encoding this protein is called citH, instead of citA, which is the case for Escherichia coli and other organisms. CitA belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340926 [Multi-domain]  Cd Length: 407  Bit Score: 38.12  E-value: 8.01e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  39 LATHYGVLLTLYATM-QVIFAPILGRLSDKYGRKPILLFSLLGaaldYLLMAFSTTLWMLY---IGRIIAG------ITG 108
Cdd:cd17368  255 LSARDSFLVTLLAGVaNFIWAPLGGALSDRIGRRPVLLVITLA----ALVTLYPVFAWLTAapsFGRLLLVllvlsfFFG 330
                         90       100       110
                 ....*....|....*....|....*....|....
gi 505244445 109 ATGAACASAMSDVTPAKNRTRYFGfLSGAFGVGL 142
Cdd:cd17368  331 MYGGAMVVALVELFPVRVRSTGFS-LVYALAVAI 363
PRK15403 PRK15403
multidrug efflux MFS transporter MdtM;
21-105 8.84e-03

multidrug efflux MFS transporter MdtM;


Pssm-ID: 237958 [Multi-domain]  Cd Length: 413  Bit Score: 37.88  E-value: 8.84e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  21 LIMPVLPTLLNEFVSENSLAThygVLLTLYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIG 100
Cdd:PRK15403  34 LIQPGIINVVRDFNADVSLAP---ASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIA 110

                 ....*
gi 505244445 101 RIIAG 105
Cdd:PRK15403 111 RFIQG 115
PRK10473 PRK10473
MdtL family multidrug efflux MFS transporter;
35-152 9.84e-03

MdtL family multidrug efflux MFS transporter;


Pssm-ID: 182486 [Multi-domain]  Cd Length: 392  Bit Score: 37.69  E-value: 9.84e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505244445  35 SENSLATHYGVLLTLYATmQVIFApilGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGItgatGAAC 114
Cdd:PRK10473  36 SEAQLHIAFSVYLAGMAA-AMLFA---GKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGI----GAGC 107
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 505244445 115 ASAMS-----DVTPAKNRTRYFGFLSGAFGVGLIIGPMLGGLL 152
Cdd:PRK10473 108 CYVVAfailrDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLI 150
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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