|
Name |
Accession |
Description |
Interval |
E-value |
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
1-765 |
0e+00 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 1209.20 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 1 MSLVYLLIAILVIMAMILLMSKRRALAKYAGYIALVAPVISSIYFLIQIPSVAKLQYLSTSIPWIKTLDINLDLRLDGLS 80
Cdd:PRK12646 1 MSLVYLLIAILVIMAMILLTSKRRALAKYAGYIALVAPIISSIYFLIQIPSVAKLQYLSTSIPWMKTLDINLDLRLDGLS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 -----------------------------------LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQ 125
Cdd:PRK12646 81 lmfsliisligiavffyatqylssrkdnlprfyfyLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 126 FGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAP 205
Cdd:PRK12646 161 FGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 206 TPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIG 285
Cdd:PRK12646 241 TPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 286 GGYAQHQQDAIASIYVFVLFGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVP 365
Cdd:PRK12646 321 GGYAQHQQDAIASIYVFVLFAALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVP 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 366 FLNGFLSKEMFLDALTQTGQLSQFSLISMIAIVFVGVIASIFTFTYALYMVKEVFWTKYDSKVFTKKNIHEPWLFSLPSL 445
Cdd:PRK12646 401 FLNGFLSKEMFLDALTQTGQLSQFSLISMIIIVFIGVIASIFTFTYALYMVKEVFWGKYDSKVFTKKNIHEPWLFSLPSL 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 446 ILMVLVPVIFFVPNIFGKGIIVPALRGVSGGNHQIDPLAPHVSQWHGFNIPLLLTIIIILLGSVLAIKVDWKKVFTGKIR 525
Cdd:PRK12646 481 ILMVLVPVIFFVPNIFGKGIIVPALRSVSGGNHQVDQLAPHVSQWHGFNIPLLLTIIIILLGSVLAIKVDWKKVFTGKIR 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 526 QISVSKGYEMVYRHFEKFATKRFKRVMQDRLNQYIIMTLGIFMIIIGYGYIRIGLPKVHQLHVSEFGALEIILAIVTVTI 605
Cdd:PRK12646 561 QISISKSYEMVYRHFEKFSTKRFKRVMQNRLNQYIIMTLGIFMIIIGYGYIRIGLPKVHQLHVSEFGPLEIILAIVTVTI 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 606 GISLIFIRQRLTMVILNGVIGFVVTLFFIAMKAPDLALTQLVVETITTILFIVSFSRLPNVPRSNANKKREIIKISVSLL 685
Cdd:PRK12646 641 GISLIFIRQRLTMVILNGVIGFVVTLFFIAMKAPDLALTQLVVETITTILFIVSFSRLPNVPRSNANKKREIIKIIVSLL 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 686 MALIVVSLIFITQQTDGLSSISDFYLKADKLTGGKNIVNAILGDFRALDTLFEGLVLIITGLGIYTLLNYQDRRGQDERE 765
Cdd:PRK12646 721 MALIVVSLIFITQQTDGLSSISDFYLKAYKLTGGKNIVNAILGDFRALDTLFEGLVLIITGLGIYTLLNYKDRRGQDERE 800
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
1-763 |
0e+00 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 678.95 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 1 MSLVYLLIAILVIMAMILLMSKRRALAKYAGYIALVAPVISSIYFLIQIPSVAKLQYLSTSIPWIKTLDINLDLRLDGLS 80
Cdd:PRK12645 1 MSLLHIAILLPFIFALLIPFLYKYFKRIHTGWFVLPVPVVLFIYFLSLIPTTMSGNTVMKTLPWIPSLGINFTLYVDGLS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 LT-----------------------------------LFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQ 125
Cdd:PRK12645 81 LLfallitgigslvvlysiyylskkkeqlgnfyvyllLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 126 FGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAP 205
Cdd:PRK12645 161 YGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANADEIQNSPLFIPAMILILLGAFTKSAQFPFYIWLPDAMEAP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 206 TPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIG 285
Cdd:PRK12645 241 TPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 286 GGyAQHQQDAIASIYVFVLFGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVP 365
Cdd:PRK12645 321 AA-SLHYQGDDSKIYAAAITAAIFHLINHATFKGSLFMIVGIVDHETGTRDIRKLGGLMTIMPITFTIALIGALSMAGLP 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 366 FLNGFLSKEMFLDALTQTGQLSQFSL-ISMIAIVFVGVIASIFTFTYALYMVKEVFWTKYDSKVFTKKnIHE-PWLFSLP 443
Cdd:PRK12645 400 PFNGFLSKEMFFESMLNATEANLFSLdTWGVLFPVIAWVASVFTFVYSIIFIFKTFFGKYKPEQLPKK-AHEaPIGMLIS 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 444 SLILMVLVPVIFFVPNIFGKGIIVPALRGVSGGNHQIDPLAPHVSQWHGFNIPLLLTIIIILLGSVLAIKVD-WKKVFTG 522
Cdd:PRK12645 479 PIILASLVVVFGLFPNILTNSIIEPAVSAILPTLIDGEDFDVHISLWHGFTPELLMTLGIIILGILLFLTFSkWVKLYQR 558
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 523 KIRQISVSKGYEMVYRHFEKFATKRFKRVMQDRLNQYIIMTLGIFMIIIGYGYIRIGLPKVHQLHVSEFGALEIILAIVT 602
Cdd:PRK12645 559 FPKKLTLNYLYDRSLDGLEKGSYKMTRSYMTGYLRDYLVYIFSALILLLGFVTIFSVAFSFNFKDVAPIRIYEVVLVAVL 638
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 603 VTIGISLIFIRQRLTMVILNGVIGFVVTLFFIAMKAPDLALTQLVVETITTILFIVSFSRLPNVPRSNANKKREIIKISV 682
Cdd:PRK12645 639 LVAAFAILFAKSRLTSIIMLGAVGYTVALFFVFFRAPDLALTQLVIETISVALFLLCFYHLPKLNRYEEKRSFKLTNALI 718
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 683 SLLMALIVVSLIFITQQTDGLSSISDFYLK-ADKLTGGKNIVNAILGDFRALDTLFEGLVLIITGLGIYTLLNYQDRRGQ 761
Cdd:PRK12645 719 SIGVGLIVTLIALSAYSNRHFESISKYYIEnVYDLAGGKNMVNVILVDFRGFDTLFEISVLGIAGLGVYTMIKLRKKRGE 798
|
..
gi 505258908 762 DE 763
Cdd:PRK12645 799 EG 800
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-753 |
3.27e-179 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 537.85 E-value: 3.27e-179
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 1 MSLVYLLIAILVIMAMILLMSK--RRALAKYAGYIALVAPVISsiyfLIQIPSVAKLQYLSTSIPWIKTLDINLDLRLDG 78
Cdd:PRK12648 1 MSLLLLVLLPFLGALLAALLPRnaRNAEAWLAGLVALAALVLL----ALLYPAVAAGEVIRAEIEWLPALGLNLSLRLDG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 79 LS----------------------------------LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDS 124
Cdd:PRK12648 77 LAwlfallilgigllvvlyaryylspadpvprffsfLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADA 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 125 QFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAA 204
Cdd:PRK12648 157 RRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLDVVLAAGDLIRAHPLYPPALVLILLGAFTKSAQFPFHFWLPHAMAA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 205 PTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGI 284
Cdd:PRK12648 237 PTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 285 GGGYAqhqqdAIAsiyvfvlfgALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGV 364
Cdd:PRK12648 317 GSPLA-----AVA---------AIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLRRLMPITATLAMVAAAAMAGV 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 365 PFLNGFLSKEMFLDALTQTGQLSQFSlismIAIVFVGVIASIFTFTYALYMVKEVFW----TKYDskvftkKNIHEP--W 438
Cdd:PRK12648 383 PLLNGFLSKEMFFAETLDTHLLGSLD----WLLPVAATLAGAFSVAYSLRFIHDVFFgpppDDLP------KTPHEPprW 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 439 LfSLPSLILMVLVPVIFFVPNIFGKGIIVPALRGVSGGnhqiDPLAPHVSQWHGFNIPLLLTIIIILLGSVLAIKVDWKK 518
Cdd:PRK12648 453 M-RAPVELLVLLCLLVGIFPALTVGPLLAAAARAVLGG----ALPEYSLAIWHGFNLPLLMSLVALVGGVLLYLLLRRLF 527
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 519 VFTGKI------RQISVSKGYEMVYRHFEKFAtKRFKRVMQD-RLNQY--IIMTLGIFMIIIGYGYIRIGLPKVHQLHVS 589
Cdd:PRK12648 528 RLAARLpgppllRRLDGKRIFERVLVALSRWA-RRLTRRLGTgRLQRQlaLLVLAALVAALLPLLTGGLLTGTRPLTPVD 606
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 590 E-FGALEIILAIVTVTigiSLIFIRQRLTMVILNGVIGFVVTLFFIAMKAPDLALTQLVVETITTILFIVSFSRLPNVPR 668
Cdd:PRK12648 607 PvFALLWLLGIACALG---AAWQAKHRLAALILLGGAGLVVCLTFVWFSAPDLALTQLLVEVVTTVLLLLGLRWLPKRTP 683
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 669 SNANKKREIIKISVSLLMALIVVSLIFITQQTDGLSSISDFYL-KADKLTGGKNIVNAILGDFRALDTLFEGLVLIITGL 747
Cdd:PRK12648 684 DESARLRRLRDLALAVVAGLGVAALAYAVMTRPAPDSISDFFLeNALPGGGGTNVVNVILVDFRGFDTFGEITVLGIAAL 763
|
....*.
gi 505258908 748 GIYTLL 753
Cdd:PRK12648 764 TVYALL 769
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
4-762 |
1.69e-172 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 515.55 E-value: 1.69e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 4 VYLLIAILVIMAMILLMSKRRAlakYAGYIALVAPVISSIYFLIQIPSVAKLQYLSTSIPWIKTLDINLDLRLDGLS--- 80
Cdd:TIGR00940 4 AFILPPFAASLIPILYPSDQRI---HIGWFVLAIPLVCFLYTLGLYPYTASGGVLHYTIDWVPELGLNFTLYMDGLAllf 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 -------------------------------LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAI 129
Cdd:TIGR00940 81 sllitgigvlvvlysiyylskeeplpnfyayLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 130 QSFMITVFGGLALLVGFIMLYIMTGTNNITDILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVS 209
Cdd:TIGR00940 161 KSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 210 AYLHSATMVKAGIFLLLRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGyA 289
Cdd:TIGR00940 241 AYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSP-S 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 290 QHQQDAIASIYVFVLFGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNG 369
Cdd:TIGR00940 320 YHYQGDDSKIYALAAVAAVFHLINHATFKGSLFMAAGIIDHETGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNG 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 370 FLSKEMFLDALTQTGQLSQFSLISMIAIV-FVGVIASIFTFTYALYMVKEVFWTKYDSKVFTKKNIHEPWLFSLPSLILM 448
Cdd:TIGR00940 400 FLSKEMFFAEAITAHLVNPFDTVTLGYLFpYVATVASVFTFVYSLRFIHGVFFGRPKPEDLPRKPHEPPRWMLASPDILV 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 449 VLVPVIFFVPNIFGKGIIVPALRGVSGGNhQIDPLAPHVsqWHGFNIPLLLTIIIILLGSVLAIKVD-WKKVFTGKIRQI 527
Cdd:TIGR00940 480 LLVLVFGLFPAQLTGPIIEPAVLSILREG-VPDDYSLSV--WHGWNPPLIMTFVALSGGILLYFLMRsWLATAVEGPPVF 556
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 528 SVSKGYEMVYRHFEKFATKRFKRVMQDRLNQYIIMTLGIFMIIIGYGYIRIGLPKVHQLHVSEFGALEIILAIVTVTIGI 607
Cdd:TIGR00940 557 RLNRIYERSLVTLSWKSARWTEQRLTTRRRQPQMRLLVFLILLAGASPLLLGNFEIPPLVVSGIDPAFALLWAIGIACAI 636
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 608 SLIFIRQRLTMVILNGVIGFVVTLFFIAMKAPDLALTQLVVETITTILFIVSFSRLPNVPRSNANKKREIIKISVSLLMA 687
Cdd:TIGR00940 637 GIAFQAHRLASIILLGGAGLVTCITFVWFSAPDLALTQLLVEIVTTVLFLLGFYHLPKLIEEPVAAKFSLSNSAIAGGVG 716
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 505258908 688 LIVVSLIFITQQTDGLSSISDFYLKADK-LTGGKNIVNAILGDFRALDTLFEGLVLIITGLGIYTLLNYQDRRGQD 762
Cdd:TIGR00940 717 LSVIIIGLIAYGNRHFESISKFYQEHVYdLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLAVYTMIKLRQTQGNE 792
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
24-765 |
5.10e-159 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 479.80 E-value: 5.10e-159
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 24 RALAKYAGYIALVAPVISSIYFLIQIPSVAKLQYLSTSIPWIKTLDINLDLRLDGLSLT--------------------- 82
Cdd:PRK12647 10 RLFGRNAGWLLALLPLALFLYFLSFIPEIAAGETVRGGYAWVPSLGVNLSFLLDGLSLTfallitgigtlivlyaggylk 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 83 -------------LFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIML 149
Cdd:PRK12647 90 ghpdlgrfysyilLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILL 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 150 YIMTGTNNITDILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFT 229
Cdd:PRK12647 170 GNVTGTYSLSELLASGDVIREHPLYLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLN 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 230 PLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAqhqqdaiasIYVFVLFgalf 309
Cdd:PRK12647 250 PVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELA---------IKAAVLF---- 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 310 hLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTqtgqlsQF 389
Cdd:PRK12647 317 -LVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALL------EA 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 390 SLISMIAIVFvGVIASIFTFTYALYMVKEVFWTKydsKVFTKKNIHE-PWLFSLPSLILMVLVPVIFFVPNIFGKGIIVP 468
Cdd:PRK12647 390 PLWSLILTVA-AVLGNALMVAVAFLVGIKPFLGK---LVETPKHPHEaPVLMWLGPAVLAVLGLLFGLFPFFFHAALLSP 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 469 ALRGVSGgnhqiDPLAPHVSQWHGFNIPLLLTIIIILLGSVLAIKVD----WKKVFTGKIRqISVSKGYEMVYRHFEKFA 544
Cdd:PRK12647 466 AASAVLG-----EPVEVKLALWHGFNLPLLLSLLTLLLGIGLYLLRArlraAMAALDRAAG-IGPDRGYDRFMDGLVRVA 539
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 545 TkRFKRVMQD-RLNQYIIMTLGIFMIIIGYGYIRIGLpKVHQLHVSEFGALEIILAIVTVTIGISLIFIRQRLTMVILNG 623
Cdd:PRK12647 540 E-WQTRVLQNgRLRNYLTVTFLTAAALLGYTLVRYGE-FPGDPSFPDVTFHEWALALIIVAGALATVTTRSRLTAIVSLG 617
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 624 VIGFVVTLFFIAMKAPDLALTQLVVETITTILFIVSFSRLPNvPRSNANKKREIIKISVSLLMALIVVSLIFITQQTDGL 703
Cdd:PRK12647 618 VQGFAVALIFILFGAPDLAMTQFLIETLSVILLVLVLYRLPS-FLDLSPPGQRLRDAAIALGCGVGMTLLLLAVTQVPFD 696
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 505258908 704 SSISDFYLKADKLTG-GKNIVNAILGDFRALDTLFEGLVLIITGLGIYTLLNYQ-DRRGQDERE 765
Cdd:PRK12647 697 DELGDYFAAYSKPIAhGRNVVNVILVDFRALDTLGEIAVLAVAALGVYALLKLRaGRERRAAAN 760
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-462 |
1.72e-156 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 468.09 E-value: 1.72e-156
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 1 MSLVYLLIAILVIMAMILLMSKRRALAKYAGYIALVAPVISSIYFLIQIPSVAKLQYLSTSIPWIKT--LDINLDLRLDG 78
Cdd:COG1009 1 LQLLWLIPLLPLLGALLAGLLGRRLGRRAAGWLAALAPLAAFVLSLLLFPAVLGGEVVVELYTWIPVgsLGLDFGFRLDG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 79 LS----------------------------------LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDS 124
Cdd:COG1009 81 LSllmlllvtgvgllvhiysigymsgdpglarffayLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 125 QFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAA 204
Cdd:COG1009 161 RRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 205 PTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGI 284
Cdd:COG1009 241 PTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 285 GGGYAqhqqdaiasiyvfvlfgALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGV 364
Cdd:COG1009 321 GAYVA-----------------ALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGI 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 365 PFLNGFLSKEMFLDALTQTGQLSqfslismIAIVFVGVIASIFTFTYALYMVKEVFWTKYDSKvfTKKNIHE-PWLFSLP 443
Cdd:COG1009 384 PPFAGFFSKEAILEAALEAGGLG-------PLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPK--TPKHPHEsPWLMTLP 454
|
490 500
....*....|....*....|
gi 505258908 444 SLILMVLVPVI-FFVPNIFG 462
Cdd:COG1009 455 LVVLAVLSLVLgLLLPGLLE 474
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-761 |
1.07e-134 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 422.80 E-value: 1.07e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 1 MSLVYLLIAILVIMAMILLmskrRALAKYAGYIALVAPVISSIYFLIQIPSVAKLQYLSTSIPWIKTLDINLDLRLDGLS 80
Cdd:PRK12644 1 MLALLLAHAVAALLAPLLV----RRLGRRAFYVLALVPAAAFVWVLAQWPAVLAGGAPTEVVPWIPSLGLDLAFRLDALA 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 -----------------------------------LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQ 125
Cdd:PRK12644 77 almsllvlgvgalvllycaryfdddeprlgrfaaeLVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAASR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 126 FGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDILGQADhiknHGLFIPM-IFMFLLGAFTKSAQFPFHIWLPRAMAA 204
Cdd:PRK12644 157 RAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLADPP----TGPAVSVaVVLILVGALSKSAIVPFHFWLPGAMAA 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 205 PTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGI 284
Cdd:PRK12644 233 PTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGI 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 285 GGgyaqhqQDAiasiyvfvLFGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGV 364
Cdd:PRK12644 313 GT------RDA--------ALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGL 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 365 PFLNGFLSKEMFLDALTQTGQLSQFSLISMIAIvfvgVIASIFTFTYALYMVKEVFWTK--YDSKVFTKKNIHEPWLFSL 442
Cdd:PRK12644 379 PPLLGFVAKEAALEAVLHDGALGPAGPVVLAGI----VLGSILTVAYSLRFLWGAFARKpgAFPSVAVTEMHRPSPLFLA 454
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 443 PSLILMVLVPVIFFVPNIfGKGIIVPALRGVSGGNHQidplAPHVSQWHGFNIPLLLTIIIILLGSVLAIKVDWKKVFTG 522
Cdd:PRK12644 455 PPAVLAVLGLVLGLLPAP-LDALLAPYADTVPAAGGE----PYHLALWHGFTLPLLLSAVVLAAGAALFWARSRVERLQA 529
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 523 KIRQ-ISVSKGYEMVYRHFEKFATKRFKRVMQDRLNQYIIMTLGIFMIIIGYGYIRIGLPKVH-QLHVSefgALEIILAI 600
Cdd:PRK12644 530 RVPAlGNADRAYDATLRALDDLSVRLTGSTQRGSLPFYLGVILVTLVVVPGAALALGTRWPPDvRLWDS---PAQVVVGL 606
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 601 VTVTIGISLIFIRQRLTMVILNGVIGFVVTLFFIAMKAPDLALTQLVVETITTILFIVSFSRLPNVPRSNANKKREIIKI 680
Cdd:PRK12644 607 VIIAAALLATRARNRLAAVLLVGVTGYGCAVIFALHGAPDLALTQFLVETITLVVFVLVLRRLPAEFSDRPLRKRRLVRA 686
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 681 SVSLLMALIVVSLIFITQQTDGLSSIS-DFYLKADKLTGGKNIVNAILGDFRALDTLFEGLVLIITGLGIYTLLnYQDRR 759
Cdd:PRK12644 687 ALAVAVGATVTVLAVFAMAARVAEPISlLFPDLAYEFGHGKNVVNVLLVDIRAWDTMGEISVLLVAATGVASLV-FRNRR 765
|
..
gi 505258908 760 GQ 761
Cdd:PRK12644 766 FG 767
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
6-753 |
5.18e-128 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 404.81 E-value: 5.18e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 6 LLIAILVIMAMILLMSKRRALAKYAGYIaLVAPVISSIYFLIQ-IPSVAKLQYLSTSIPWIKTL-----DINLDLRLDGL 79
Cdd:PRK12650 2 LAVLALAALAVVLAPPLVRVLDRKAGWP-LAAIFVAAAGLLLKeLPPILDGDALTWSVTWIPDLlgngvDVNLALRADAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 80 SL----------------------------------TLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISywyNNGDS- 124
Cdd:PRK12650 81 SLffallalvigavvfiysarylprkkgntsfyllmTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIA---RSGSGg 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 125 QFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAA 204
Cdd:PRK12650 158 EAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVWAEKPGLTTVVAVLIAVAAFTKSAQFPFHFWLPEAMAA 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 205 PTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGI 284
Cdd:PRK12650 238 ITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGV 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 285 GGGYAqhqqdaiasiyvfvLFGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGV 364
Cdd:PRK12650 318 GTPFA--------------LTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAV 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 365 PFLNGFLSKEMFLDALTQTgqlsQFSLISMIAIVFVGVIASIFTFTYALYMVKEVF-WTKYDskvftKKNIHE-PWLFSL 442
Cdd:PRK12650 384 PPLFGFVSKEGMLTAFLEA----PGGNAGVVLLLVGAALGAVFTFAYSARLVLGAFvDGPRD-----MSHVKEaPVSLWL 454
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 443 PSLILMVLVPVIFFVPNIFGKgIIVPALRGVSGgnhqiDPLAPHVSQWHGFNIPLLLTIIIILLGSVLAIKVDW-KKVFT 521
Cdd:PRK12650 455 PAALPGALSLPLGLVPGLLDA-PVSAAATAAAG-----EHAHTHLALWHGVNTPLLISLLVIVLGILGVLFRKPlWEPLE 528
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 522 GkiRQISVSKGYEMVyrHFEKFATKRFKRV---MQDRLNQ-----YIIMTLGIFmiiigygyIRIGLPKVHQLHVSEFGA 593
Cdd:PRK12650 529 S--RPLAPFSGLDIL--DAVRDRIIAFGRFvgrMADSMSPrrhlvIPFLLLILL--------AGFGLIGVDGLPPRVGGI 596
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 594 LEIILAIVTVTIGISLIFI---RQRLTMVILNGVIGFVVTLFFIAMKAPDLALTQLVVETITTILFIVSFSRLP-NVPRS 669
Cdd:PRK12650 597 DRWIDLVLLAIIALGVIALvrtRTRLAAVVLVGVVGVGVTLQMLTLGAPDVALTQLLVEALTVVVMMLVLRRQPrNFHRE 676
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 670 NANKKREIIKISVslLMALIVVSLIFITQQTDGLSSISDFYL-KADKLTGGKNIVNAILGDFRALDTLFEGLVLIITGLG 748
Cdd:PRK12650 677 KTRRRRFAVLVAV--LAGLATFLGVWALTGRHERSELAEWYLnNGPEITGGDNVVNTILVEFRALDTLGELSVLGMAGVV 754
|
....*
gi 505258908 749 IYTLL 753
Cdd:PRK12650 755 IAALL 759
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
31-753 |
2.71e-123 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 388.03 E-value: 2.71e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 31 GYIALVAPVISSIYFLIQIPSVAKLQYLSTSIPWIKTLDINLDLRLDGLS------------------------------ 80
Cdd:PRK12649 33 GWFAAAIAFTSFALIAQVAPEVIHGTIITGSISWLPSAGVEFSIYADGLAvligliasgigviimsysngymshkedlpr 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 ----LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTN 156
Cdd:PRK12649 113 yyqyLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTY 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 157 NITDILGQA---DHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLG 233
Cdd:PRK12649 193 DIATILQDSeliENIKGHPLFLITLILIFIGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFS 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 234 LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgiggGYAQHQQDAIAsiyvfvLFGALFHLMN 313
Cdd:PRK12649 273 GTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMY----GYTTYHEPGLG------VAAATFHLLN 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 314 HAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLSQFslIS 393
Cdd:PRK12649 343 HATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYETSVEMGALIGG--PF 420
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 394 MIAIVFVGVIASIFTFTYALYMVKEVFWTKYDsKVFTKKNIHE-PWLFSLPSLILMVLVPVIFFVPNIFGKGIIVPALRG 472
Cdd:PRK12649 421 TIIIPAVAVLGGVFTFAYSIKLIDGIFLGERT-HDHLPHHIHEaPYVMLIPAAFLAGLVILFGLVPSIPIHNIIEPATSG 499
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 473 VSggnhqIDPLAPHVSQWHGFNIPLLLTIIIILLGSVLAIKVD----WKKVFTGKIRQISVSKGYEMVYRHFEKFATKRF 548
Cdd:PRK12649 500 IV-----LETAHLHVKLWHGFTPALMMTIITFILGLLIYTKYDaiaaWQDRFNAKYPWISVNYYYDAIVNNAKGNAHKFA 574
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 549 KRVMQDRLNQYIIMTLGIFMIIIGYGYIRIGLPKVHQLHVSEFGALEIILAIVTVTIGISLIFIRQRLTMVILNGVIGFV 628
Cdd:PRK12649 575 SFAQPGPIKLYIKATLLLMIALIFIPLYMLGGDLLPAGLNFDIPPYEAVLMLLMIVAALAAALLPRYLPAVIALSALGYL 654
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 629 VTLFFIAMKAPDLALTQLVVETITTILFIVSFSRLPNVPRSNANKKREIIKISVSLLMALIVVSLIFITQQ--TDGLSSI 706
Cdd:PRK12649 655 VSLLFIYLKAPDLALTQILVETLSTIIFLLVIIKIPQKFKEKIPKGKLLRDILISGVVSFGVLIVLLNATQgiVPPFESL 734
|
730 740 750 760
....*....|....*....|....*....|....*....|....*...
gi 505258908 707 SDFYL-KADKLTGGKNIVNAILGDFRALDTLFEGLVLIITGLGIYTLL 753
Cdd:PRK12649 735 SHYFIeKSVALTGGHNVVNVILVDFRGYDTLGEISVLCLAALGVYNLI 782
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-450 |
3.61e-73 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 250.08 E-value: 3.61e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 1 MSLVYLLIAILVIMAMILLMSKRRALAKYAGYIALVAPVIS---SIYFLIQIPSVAKLQYLSTSIPWIKT--LDINLDLR 75
Cdd:PRK06590 2 MNLLWLIVLLPLIGALILGLFGRRIGEKWAHLVGTGLVGLSallSLVVFFDFLLGGGRAFSQTLWTWISVgdFDVDFGLR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 76 LDGLSLT----------------------------------LFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNN 121
Cdd:PRK06590 82 VDGLSATmlvvvtgvsflvhiysigymahdegyrrffaylnLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKK 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 122 GDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDILGQADHI--KNHGLFIPMIFMFLLGAFTKSAQFPFHIWLP 199
Cdd:PRK06590 162 PSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVFAAAPQFfgLGWSALTLICLLLFIGAMGKSAQFPLHTWLP 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 200 RAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLG-MI 278
Cdd:PRK06590 242 DAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGyMF 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 279 MAMvGIGGgyaqhqqdaiasiYVFvlfgALFHLMNHAIFKCALFMGVG--IL--DHEagsRDIRILSGMRQLFPKMNLVM 354
Cdd:PRK06590 322 LAL-GVGA-------------YAA----AIFHLMTHAFFKALLFLGAGsvIHamHHE---QDIRKMGGLRKKMPVTYATF 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 355 TIAALSMAGVPFLNGFLSKEMFLDALTQTGQLSQFslismiaivFVGVIASIFTftyALYMVKEVFWTKYDSKVFTKKNI 434
Cdd:PRK06590 381 LIGTLALIGIPPFAGFFSKDEILEAAFANGHINLF---------VAGLVGAFLT---AFYSFRLIFLVFHGKEKEKIHHP 448
|
490
....*....|....*..
gi 505258908 435 HE-PWLFSLPSLILMVL 450
Cdd:PRK06590 449 HEsPAVMTLPLIVLAVL 465
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
2-411 |
2.76e-70 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 236.97 E-value: 2.76e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 2 SLVYLLIAI-LVIMAMILLMSKRRALAKYAGYIALVAPVISSIYFLIQIPSVAKLQYLSTSipWIKTLDINLdlRLDGLS 80
Cdd:COG0651 3 HLLILPVLLpLLAAALLLLLGRRRRLQRALSLLASLALLALALALLLQVLAGGPLVYALGG--WPAPFGIVL--VADRLS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 ----------------------------------LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYwYNNGDSQF 126
Cdd:COG0651 79 alfllltalvalavllysigymrherrgrrfyplFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVAL-GGTKEALR 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 127 GAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDILGQADHIkNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMA-AP 205
Cdd:COG0651 158 AGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAEL-DPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYPaAP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 206 TPVSAYLhSATMVKAGIFLLLRFTPLL---GLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMV 282
Cdd:COG0651 237 SPVSALL-SGLLTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 283 GIGGGYAqhqqdaiasiyvfvLFGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMA 362
Cdd:COG0651 316 GLGTPLG--------------LAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALA 381
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 505258908 363 GVPFLNGFLSKEMFLDALTQTGQLsqfslismiAIVFVGVIASIFTFTY 411
Cdd:COG0651 382 GLPPLSGFVSKWLLLQAALEAGAW---------LLAAVLLLSSLLTLAY 421
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
2-450 |
8.98e-70 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 240.65 E-value: 8.98e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 2 SLVYLLIAILVIMAMILLMSKRRALAKYAGYIALVAPVIS---SIYFLIQIPSVAKLQYLSTSI-PWIKT--LDINLDLR 75
Cdd:TIGR01974 1 NLIFLIVFLPLIGFLIAGLFGRRIGERVSGIIGIGSVGLSaalSAFVFVDFFLNGEGEAFTQSLfPWISVggFQVDFGLR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 76 LDGLSLT----------------------------------LFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNN 121
Cdd:TIGR01974 81 LDGLSLTmlvvvtgvgslvhiysigymahdegysrffaylnLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 122 GDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDILGQADHIKNHGLFIPMIFMFLlGAFTKSAQFPFHIWLPRA 201
Cdd:TIGR01974 161 PSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPGAFFSALTLICLLLFI-GAMGKSAQLPLHTWLPDA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 202 MAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLG-MIMA 280
Cdd:TIGR01974 240 MEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGyMFLA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 281 MvGIGGgyaqhqqdaiasiYVFvlfgALFHLMNHAIFKCALFMGVGILDHEA-GSRDIRILSGMRQLFPKMNLVMTIAAL 359
Cdd:TIGR01974 320 L-GVGA-------------YAA----AIFHLMTHAFFKALLFLGAGSVIHAMhHEQDIRKMGGLRKKMPVTYITFLIGSL 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 360 SMAGVPFLNGFLSKEMFLDALTQTGQLSQFSLIsmiaivfvGVIASIFTFTYALYMVKEVFWTKydSKVFTKKNIHE-PW 438
Cdd:TIGR01974 382 ALIGFPGFAGFFSKDLILEAAFASGTHSFLFVA--------GLIGAFLTAFYSFRLIFMVFHGK--ERHEADAHPHEsPL 451
|
490
....*....|..
gi 505258908 439 LFSLPSLILMVL 450
Cdd:TIGR01974 452 VMLLPLIVLAVG 463
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-467 |
2.90e-61 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 216.74 E-value: 2.90e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 1 MSLVYLLIAILVIMAMILLMSKRRALAKYAGYIALVAPVISSIYFLIQipsvaKLQYLSTSIPWIK--TLDINLDLRLDG 78
Cdd:MTH00211 5 FNSGFLLILILLLLPLLLPLNNSKLHIKKAVKLSFFISLIPLLIFLDQ-----GLETILTNWSWINlgLFSLNLSFKFDF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 79 LS----------------------------------LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDS 124
Cdd:MTH00211 80 YSifftsvalyvtwsilefslwymssepninrffkyLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 125 QFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDILGqadhikNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAA 204
Cdd:MTH00211 160 NTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFI------LNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 205 PTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGI 284
Cdd:MTH00211 234 PTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGL 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 285 GGGYAqhqqdaiasiyvfvlfgALFHLMNHAIFKCALFMGVGILDHEA-GSRDIRILSGMRQLFPKMNLVMTIAALSMAG 363
Cdd:MTH00211 314 NQPQL-----------------AFLHICTHAFFKAMLFMCSGSIIHGLnNEQDIRKMGGLSKNLPFTSSCLFLGSLALMG 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 364 VPFLNGFLSKEMFLDALTqTGQLSQFSLismiaivFVGVIASIFTFTYALYMVKEVFWTKYDSKVFTKKNIHEPWLFS-L 442
Cdd:MTH00211 377 FPFLSGFFSKDLILESMN-GSYLNAWAL-------LLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNpL 448
|
490 500
....*....|....*....|....*
gi 505258908 443 PSLILMVLVPVIFFVPNIFGKGIIV 467
Cdd:MTH00211 449 KRLALGSILAGFIITSNLPPEKPEI 473
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
81-454 |
4.81e-58 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 205.21 E-value: 4.81e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYwYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITD 160
Cdd:PRK06525 119 LLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISY-YQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSA 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 161 ILGQADHIKnhglfiPMIFMFLL-GAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLG-LSNMY 238
Cdd:PRK06525 198 LSGLHGSLK------YLVFLGILfAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGpIPHVI 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 239 IYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMImaMVGIGGGYAQHQqdaiasiyvFVLFGALFHLMNHAIFK 318
Cdd:PRK06525 272 GYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYM--FFGLSLAILGSR---------LALEGSIAYIFNHAFAK 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 319 CALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLSqfslISMIAIV 398
Cdd:PRK06525 341 SLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEY----WILLPAM 416
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 505258908 399 FVGVIASIFTFTYALYMVKEVFWTKYDSKVFTKKNIHEPWLFSLPSLILMVLV-PVI 454
Cdd:PRK06525 417 VLLLIESVASFAWFLRWFGRVVFGEPSEAVADAAPLPGSMKLVLIVLIVMSLVsPVI 473
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
81-379 |
1.46e-56 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 205.26 E-value: 1.46e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGT---NN 157
Cdd:PRK07376 128 LSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSfdfDG 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 158 ITDILGQADHIKNHGLFIPMIFMFL--LGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLS 235
Cdd:PRK07376 208 IADRLSELVSSGAVSGWLALLLCILvfLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQF 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 236 NMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLG-MIMAMvGIGGGYAqhqqdaiasiyvfvlfgALFHLMNH 314
Cdd:PRK07376 288 PAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGyMVMAM-GCGAYSA-----------------GLFHLMTH 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 505258908 315 AIFKCALFMGVG--------ILDHEAG-SRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDA 379
Cdd:PRK07376 350 AYFKAMLFLGSGsvihgmeeVVGHDPVlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGA 423
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
81-447 |
2.22e-55 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 200.69 E-value: 2.22e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITD 160
Cdd:MTH00020 117 LSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSS 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 161 ILGQADHIKNHGLFIPMIFMFLlGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYIY 240
Cdd:MTH00020 197 VFNMVVSAPSSDITLICLFLFI-GAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALI 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 241 IVTFVGLITMLFGSITALKQWDLKGILAYSTISQLG-MIMAMvgiggGYAQHqqdaiaSIyvfvlfgALFHLMNHAIFKC 319
Cdd:MTH00020 276 IVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGyMVVAC-----GLSHY------SI-------SLFHLMNHAFFKA 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 320 ALFMGVGILDHE-AGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDAltqtgQLSQFSLISmiaIV 398
Cdd:MTH00020 338 LLFLSAGSVIHAlSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILEL-----AFGQYYLIF---AY 409
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 505258908 399 FVGVIASIFTFTYALYMVKEVFWTKYDSKVFTKKNIHE-PWLFSLPSLIL 447
Cdd:MTH00020 410 WLGCFSALLTAFYSIRLIYLTFLSNTNLKKAVFFHLHEgDWNLLLPLGIL 459
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
83-449 |
4.90e-54 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 196.22 E-value: 4.90e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 83 LFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYwYNNGDSQFGAiqsfMITVFG---GLALLVGFIMLYIMTGTNNIT 159
Cdd:MTH00151 93 LFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIY-YQNKKSLSAG----MLTALTnriGDVLILLSIALLVLLGHWSIL 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 160 DILGQadhiknhGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYI 239
Cdd:MTH00151 168 SMWDF-------KLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFS 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 240 YIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaiaSIYVfvlfgALFHLMNHAIFKC 319
Cdd:MTH00151 241 SFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLG------------MPSL-----ALFHLYTHALFKA 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 320 ALFMGVG-ILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLdaltqtgQLSQFSLISMIaIV 398
Cdd:MTH00151 304 LLFLCAGsIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLIL-------ESSLMSPTSLL-MV 375
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 505258908 399 FVGVIASIFTFTYALYMVKEVFWTKYDSKVFTKKNIHEPWLfSLPSLILMV 449
Cdd:MTH00151 376 LLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSDEDFYV-SLPMLLLSL 425
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-461 |
5.66e-54 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 194.14 E-value: 5.66e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 1 MSLVYLLIAILVIMAMILLMSKRR--ALAKYAGYIALVAPVISSIYFLIQI-PSVAKLQyLSTSIPWIKTLDINLDLRLD 77
Cdd:COG1008 3 MPLLSLLILLPLLGALLLLLLPRRnaRLARWVALAVSLLTLLLSLYLLAGFdPGTGGFQ-FVESYPWIPSLGISYHLGVD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 78 GLSLTL-------------------------FMF-------SMIGIVLSDNTILMYIFWELTSVSSFLLISYWyNNGDSQ 125
Cdd:COG1008 82 GISLPLvlltalltplailaswneikkrpklYYAllllleaGMIGVFLALDLFLFYVFWELMLIPMYFLIGIW-GGERRI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 126 FGAIQSFMITVFGGLALLVGFIMLYIMTGTNNiTDILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMA-A 204
Cdd:COG1008 161 YAAIKFFLYTLAGSLLMLVAILALYFLAGALT-FDIAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVeA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 205 PTPVSAyLHSATMVKAGIFLLLRFT-PLL-GLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAmv 282
Cdd:COG1008 240 PTAGSV-LLAGVLLKMGGYGLLRFAlPLFpEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLL-- 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 283 gigggyaqhqqdAIASIYVFVLFGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMA 362
Cdd:COG1008 317 ------------GIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASL 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 363 GVPFLNGFLSKEMFLDALTQtgqlsqfsliSMIAIVFVGVIASIFTFTYALYMVKEVFWTKYDSKVFTKKNIHepWLFSL 442
Cdd:COG1008 385 GLPGTSGFVGEFLVLLGAFQ----------VNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLN--PRELA 452
|
490
....*....|....*....
gi 505258908 443 PSLILMVLVPVIFFVPNIF 461
Cdd:COG1008 453 VLAPLAALILLLGLYPQPL 471
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
94-405 |
3.53e-53 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 185.98 E-value: 3.53e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 94 SDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDILGQADHIKNHGL 173
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 174 FIPMIFMFLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLLRFTPLLGL-SNMYIYIVTFVGLITML 251
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPsSPFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 252 FGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAqhqqdaiasiyvfvLFGALFHLMNHAIFKCALFMGVGILDHE 331
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYG--------------IQAAIFHLLTHGLFSAGLFLCAGSVIYR 225
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 505258908 332 -AGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQtgqlsqfslISMIAIVFVGVIAS 405
Cdd:pfam00361 226 rVHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVA---------ASWIFLVLAGVVGS 291
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
79-461 |
6.53e-53 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 190.86 E-value: 6.53e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 79 LSLTLFM-FSMIGIVLSDNTILMYIFWELTSVSSFLLISYwYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNN 157
Cdd:PRK08375 109 YALFLLLlAGLLGALLTADLFNLFVFLEIMSLSSYALVAM-GGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLN 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 158 ITDILGQADHikNHGLFIPMIFMFLLGaFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLR-----FTPLL 232
Cdd:PRK08375 188 MADLAGALAE--NPTVVTAFGFVLLAL-ALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRiyftvFGGDF 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 233 GLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAqhqqdaiasiyvfvLFGALFHLM 312
Cdd:PRK08375 265 RFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLA--------------LAAGLLHLL 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 313 NHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQlsqfsli 392
Cdd:PRK08375 331 HHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQ------- 403
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 505258908 393 smIAIVFVGVIASIFTFTYALYMVKEVFWTKYDSKVfTKKNIHEPWLFSLPSLILMVLVPVIFFVPNIF 461
Cdd:PRK08375 404 --WLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGS-EAPKQEAPLGMLAPSLALALLSLLLGIYAGPL 469
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
83-451 |
1.01e-50 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 186.89 E-value: 1.01e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 83 LFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYwYNNGDSqfgaIQSFMITVF----GGLALLVGfIMLYIMTGTNNI 158
Cdd:MTH00165 93 LFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIY-YQNKKS----YNAGMLTALsnriGDVAILLS-IAWMMNFGSWNF 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 159 TDILgqaDHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLgLSNMY 238
Cdd:MTH00165 167 IFYL---DFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLL-FSSFF 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 239 IYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaiasiYVFVlfgALFHLMNHAIFK 318
Cdd:MTH00165 243 SKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLG--------------FPKL---AFFHLLTHALFK 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 319 CALFMGVGILDHE-AGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTqtgqlsqFSLISMIAI 397
Cdd:MTH00165 306 ALLFLCAGSIIHNmSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVS-------MSNLNFFIF 378
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 505258908 398 VFVgVIASIFTFTYALYMVKEVFWTKYDSKVFTKKNIHEPW-LFSLPSLILMVLV 451
Cdd:MTH00165 379 FLF-FFSTGLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFmLKSMILLLFMSIF 432
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
81-416 |
2.05e-49 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 184.02 E-value: 2.05e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITD 160
Cdd:MTH00208 144 LIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNE 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 161 ILGQADHikNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYIY 240
Cdd:MTH00208 224 ILSLNNS--NSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLS 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 241 IVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGggyaqhqQDAIasiyvfvlfgALFHLMNHAIFKCA 320
Cdd:MTH00208 302 LCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLN-------QPNL----------ALFHICTHAFFKAM 364
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 321 LFMGVGILDHEAGS-RDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDAltqtGQLSQFSLISmiaiVF 399
Cdd:MTH00208 365 LFLCSGSIIHSLNNeQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEA----GLASISNLLS----II 436
|
330
....*....|....*..
gi 505258908 400 VGVIASIFTFTYALYMV 416
Cdd:MTH00208 437 LALIATLLTAVYSFRII 453
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
81-447 |
4.63e-49 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 182.90 E-value: 4.63e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITD 160
Cdd:MTH00210 117 LSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFST 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 161 ILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYIY 240
Cdd:MTH00210 197 ISSLLVTNINKESLTIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALT 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 241 IVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMiMAMVGIGGGYAQhqqdaiasiyvfvlfgALFHLMNHAIFKCA 320
Cdd:MTH00210 277 IVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGY-MVMVCGISNYST----------------SLFHLMNHAFFKAL 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 321 LFMGVGILDHE-AGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALtqtgqlsqFSLISMIAIVF 399
Cdd:MTH00210 340 LFLSAGSVIHAvSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELT--------YDKYYIAFAYW 411
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 505258908 400 VGVIASIFTFTYALYMVKEVFWTKYDSKVFTKKNIHEP-WLFSLPSLIL 447
Cdd:MTH00210 412 LGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGVHESsWNITFPLLLL 460
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
55-416 |
1.08e-47 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 178.82 E-value: 1.08e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 55 LQYLSTSIPW--IKTLDINLDLRLDGLS----------------------------------LTLFMFSMIGIVLSDNTI 98
Cdd:MTH00004 59 TESITTNWPWifTTTFNIPISFKLDQYSlmflpialfvtwsilefstwymasdphitkffkyLLIFLIAMLILITANNMF 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 99 LMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDILGQADhiknhglfIPMI 178
Cdd:MTH00004 139 QLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFSPTQ--------TPTL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 179 FM--FLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYIYIVTFVGLITMLFGSIT 256
Cdd:MTH00004 211 PLlgLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATC 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 257 ALKQWDLKGILAYSTISQLGMIMAMVGIGggyaQHQQdaiasiyvfvlfgALFHLMNHAIFKCALFMGVGILDHE-AGSR 335
Cdd:MTH00004 291 ALTQNDIKKIIAFSTSSQLGLMMVTIGLN----QPQL-------------AFLHISTHAFFKAMLFLCSGSIIHNlNNEQ 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 336 DIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTqTGQLSQFSLISMIaivfvgvIASIFTFTYALYM 415
Cdd:MTH00004 354 DIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLN-TSYLNAWALLLTL-------LATSFTAAYSLRM 425
|
.
gi 505258908 416 V 416
Cdd:MTH00004 426 I 426
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
81-416 |
1.32e-47 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 178.56 E-value: 1.32e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITD 160
Cdd:MTH00066 119 LLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQ 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 161 ILgqadhIKNHGLFIPMIfMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYIY 240
Cdd:MTH00066 199 IF-----LLNDNSTLPLL-GLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALT 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 241 IVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGggyaQHQQdaiasiyvfvlfgALFHLMNHAIFKCA 320
Cdd:MTH00066 273 ICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLN----QPQL-------------AFFHICTHAFFKAM 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 321 LFMGVGILDHEAGS-RDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTqTGQLSQFSLISMIaivf 399
Cdd:MTH00066 336 LFLCSGSIIHSLNDeQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMN-TSNLNSWALILTL---- 410
|
330
....*....|....*..
gi 505258908 400 vgvIASIFTFTYALYMV 416
Cdd:MTH00066 411 ---IATSFTAVYSFRII 424
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
3-404 |
1.14e-45 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 173.92 E-value: 1.14e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 3 LVYLLIAILVIMAMI-LLMSKRRALAKYAGYIAL----VAPVISSIYFLIQIPSVAKLqyLSTSIPWIKtldinLDLRLD 77
Cdd:PRK06521 7 LLLLSLLLYLALGLAgLLLLRRPRLAIRLSGPTGllggLLGLASGLTALFAGPTLAAV--LPLGLPFLP-----FHLRLD 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 78 GLS------------------------------------LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNN 121
Cdd:PRK06521 80 ALSaffllvisllgaaaslyslgyfreyegkgpgamgffYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHRE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 122 GDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDILGQAdhikNHGLFIPMIFMF-LLGAFTKSAQFPFHIWLPR 200
Cdd:PRK06521 160 AEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRAAH----LSPFWASLVFLLaLFGFGAKAGLVPLHVWLPR 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 201 AM-AAPTPVSAyLHSATMVKAGIFLLLRFT-PLLGLSNMYI-YIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGM 277
Cdd:PRK06521 236 AHpAAPSHVSA-LMSGVMLKVAIYGILRVVfDLLGAPGWWWgVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGI 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 278 IMAMVGIGGGYAQHQQDAIASIyvfVLFGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIA 357
Cdd:PRK06521 315 IFVGLGLAMVFIAYGMPLLAAL---ALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIG 391
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 505258908 358 ALSMAGVPFLNGFLSKEMFLDALTQTGQLSQFsLISMIAIVFVGVIA 404
Cdd:PRK06521 392 CLAISALPPLNGFVSEWLLLQSLLSSPGLPQW-GLKLAVPIAAAMLA 437
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
81-326 |
1.17e-45 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 174.69 E-value: 1.17e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNgDSQFGAIQSFMITV----FGglaLLVGFIMLYIMTGT- 155
Cdd:CHL00025 128 LSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR-PIAANACQKAFVTNrvgdFG---LLLGILGFYWITGSf 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 156 --NNITDILGQADHIKNHGLFIPMIFMFLL--GAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPL 231
Cdd:CHL00025 204 efRDLFEIFNNLIYNNEVNLLFATLCAFLLflGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 232 LGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLG-MIMAMvGIGGGYAqhqqdaiasiyvfvlfgALFH 310
Cdd:CHL00025 284 FIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGyMMLAL-GIGSYRA-----------------ALFH 345
|
250
....*....|....*.
gi 505258908 311 LMNHAIFKCALFMGVG 326
Cdd:CHL00025 346 LITHAYSKALLFLGSG 361
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
83-416 |
2.58e-45 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 171.37 E-value: 2.58e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 83 LFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVfgGLALLVGFIMLYIMTGTNNITDIl 162
Cdd:MTH00209 91 LFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRV--GDALLILSIAWMLMHGNWNIFYL- 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 163 gqadhIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYIYIV 242
Cdd:MTH00209 168 -----NFNSNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSL 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 243 TFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAqhqqdaiasiyvfvlfgALFHLMNHAIFKCALF 322
Cdd:MTH00209 243 LLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPEL-----------------AFFHLITHALFKALLF 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 323 MGVGILDH-EAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLdaltQTGQLSQFSLISMIAIVFVG 401
Cdd:MTH00209 306 ICAGNIIHsHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL----ESMLESNMPIMTLILMFLST 381
|
330
....*....|....*
gi 505258908 402 VIASIFTFTYALYMV 416
Cdd:MTH00209 382 SLTAAYSMRLSYFSL 396
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
81-416 |
4.32e-45 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 171.17 E-value: 4.32e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLvgFIMLYIMTGTN--NI 158
Cdd:MTH00137 125 LLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLI--LAMAWMATNLNswEI 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 159 TDILGQAdhiKNHGLFIPMIfMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMY 238
Cdd:MTH00137 203 QQIFALS---KDFDLTLPLL-GLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTA 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 239 IYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGggyaQHQQdaiasiyvfvlfgALFHLMNHAIFK 318
Cdd:MTH00137 279 LTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLN----QPQL-------------AFLHICTHAFFK 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 319 CALFMGVGILDHEAG-SRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTqTGQLSQFSLIsmiai 397
Cdd:MTH00137 342 AMLFLCSGSIIHSLNdEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALN-TSHLNAWALT----- 415
|
330
....*....|....*....
gi 505258908 398 vfVGVIASIFTFTYALYMV 416
Cdd:MTH00137 416 --LTLIATSFTAVYSLRVV 432
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
34-454 |
1.19e-44 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 168.23 E-value: 1.19e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 34 ALVAPVISSIYFLIQIPSVAKLQYLStSIPWIKTLdinldlrldglsLTLFMFSMIGIVLSDNTILMYIFWELTSVSSFL 113
Cdd:PRK12667 85 ALLGLLTALVMFLILIYSYWYLEHES-GPEWYYTL------------LLGLEAGMLGILLTGDAFNLFVMLEVLSISAYG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 114 LISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDIlgqadHIKNHGLFIPM--------------IF 179
Cdd:PRK12667 152 LVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADL-----SAKIRGLSFPLtgglagnpplalgvAL 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 180 MFLLGAFT-KSAQFPFHIWLPRAM-AAPTPVSAYLhSATMVKAGIFLLLRF--------TPLLGLSNMYIYIVTFVGLIT 249
Cdd:PRK12667 227 ALALWAFTiKAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgisPSLIDFRAALSPILIILGAVS 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 250 MLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAqhqqdaiasiyvfvLFGALFHLMNHAIFKCALFMGVGILD 329
Cdd:PRK12667 306 AIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLG--------------LAAALFHIINHAIAKSLLFLASGVFI 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 330 HEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQlsqfslismIAIVFVGVIASIFTF 409
Cdd:PRK12667 372 HAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGF---------YLPALVLLIASAISL 442
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 505258908 410 TYALYMVKEVFWTKYDSKVFTKKniHEPWLFSLPSLILMVLVPVI 454
Cdd:PRK12667 443 VGYFRAWYSLFFGKPKSGEEVEH--KESPSMSVVILVLALAVLIL 485
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
81-379 |
3.57e-44 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 168.49 E-value: 3.57e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGlallVGFIMLYIMTGTNNITD 160
Cdd:MTH00108 121 LLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGD----IGFILAMAWFLLNLNSW 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 161 ILGQADHIKNHGLFIPMIFMfLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYIY 240
Cdd:MTH00108 197 DLQQIFMLNPNNSNLPLMGL-LLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQT 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 241 IVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAqhqqdaiasiyvfvlfgALFHLMNHAIFKCA 320
Cdd:MTH00108 276 LTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHL-----------------AFLHICTHAFFKAM 338
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 321 LFMGVGILDHEAGS-RDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDA 379
Cdd:MTH00108 339 LFMCSGSIIHNLNDeQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEA 398
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
81-385 |
5.87e-44 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 168.98 E-value: 5.87e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITD 160
Cdd:MTH00032 117 LSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLT 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 161 ILGQA--DHIKNHGL------------FIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLL 226
Cdd:MTH00032 197 FNGGSvgSGIMDRGYygggayesplapFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMI 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 227 RFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQhqqdaiasiyvfvlfg 306
Cdd:MTH00032 277 RSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHNV---------------- 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 307 ALFHLMNHAIFKCALFMGVGILDHEAG--SRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDaLTQTG 384
Cdd:MTH00032 341 GLFHLVNHAFFKALLFLSAGSVIHSTTvdEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILE-LTYSG 419
|
.
gi 505258908 385 Q 385
Cdd:MTH00032 420 R 420
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
83-413 |
1.05e-43 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 167.99 E-value: 1.05e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 83 LFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITdIL 162
Cdd:PRK08667 119 LFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELS-PL 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 163 GQADHIknhglfIPMIFMFLLGAF-TKSAQFPFHIWLPRAM-AAPTPVSAyLHSATMVKAGIFLLLRFtpLLGLSNMYIY 240
Cdd:PRK08667 198 GASAGI------LSLVFLLLFLGFgIKAGIIPFHKWLPYAHpASPSNVSA-LMSGVMLKVAVYGLVRF--LMDVLSPELW 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 241 ---IVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQHQQDAIASIyvfVLFGALFHLMNHAIF 317
Cdd:PRK08667 269 wgvLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLALL---ALGGALFHSLNHALF 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 318 KCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTgqlsqFSLISMIAI 397
Cdd:PRK08667 346 KSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQS-----FSVADPLIK 420
|
330
....*....|....*.
gi 505258908 398 VFVGVIASIFTFTYAL 413
Cdd:PRK08667 421 ILLFSVLAIFALTSAL 436
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
81-420 |
1.25e-42 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 162.78 E-value: 1.25e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYwYNNGDSQFGAIQSFMITVFGGLALLVgFIMLYIMTGTNNITD 160
Cdd:MTH00095 82 LLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLF-YNNWDSNSGAMNTALTNRIGDFFIFL-FFSGFIFSSYYFFSF 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 161 ILgqadhiknhgLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLgLSNMYIY 240
Cdd:MTH00095 160 SF----------FSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLI-LNMNVMK 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 241 IVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFGALFHLMNHAIFKCA 320
Cdd:MTH00095 229 IMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSG-----------------LSFVSFIHLLSHALFKSC 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 321 LFMGVGILDHEA-GSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALtqtgqlsqFSLISMIAIVF 399
Cdd:MTH00095 292 LFMQVGYLIHSNfGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELF--------FFNNYMIFFSL 363
|
330 340
....*....|....*....|.
gi 505258908 400 VGVIASIFTFTYALYMVKEVF 420
Cdd:MTH00095 364 MFFFSVFLTFGYSYRLWKSFF 384
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
83-422 |
3.51e-39 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 153.38 E-value: 3.51e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 83 LFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYwYNNGDSqfgaIQSFMITVfggLALLVGFIMLYIMTGTNnitdiL 162
Cdd:MTH00207 96 LFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIY-YQNPKS----LGAGMITA---LTNRIGDVMLLLSIGWT-----L 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 163 GQADHIKNHGLFIPM----IFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMY 238
Cdd:MTH00207 163 NQGHWSITNMWQTDMnnyiALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWF 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 239 IYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaiasiyvFVLFgALFHLMNHAIFK 318
Cdd:MTH00207 243 NPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLG----------------MPKL-ALFHLITHALFK 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 319 CALFMGVGILDH-EAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDAltqtgqlSQFSLISMIAI 397
Cdd:MTH00207 306 ALLFVCAGSLIHsHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILES-------SLFYPHNSLMI 378
|
330 340
....*....|....*....|....*
gi 505258908 398 VFVgVIASIFTFTYALYMVKEVFWT 422
Cdd:MTH00207 379 LMI-FLATALTAAYSTRFTLAVLWS 402
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
1-451 |
3.60e-39 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 151.89 E-value: 3.60e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 1 MSLVYLLIAILVIMAMILLMSKRRA--LAKYAGYIALVAPVISSIYFLIQI-PSVAKLQyLSTSIPWIKTLDINLDLRLD 77
Cdd:PRK05846 3 WPLLSLLIFLPLIGGLLVLLTERFGarLARWIALIGTLLTLLLSLVLWIGFdSSNAGFQ-FVEKHPWIPRFGISYHLGVD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 78 GLSLTL-------------------------FMFS-------MIGIVLSDNTILMYIFWELTSVSSFLLISYWyNNGDSQ 125
Cdd:PRK05846 82 GISLLLvvltalltplavlasweeikkrvkfYMAAllwleggVIGVFAALDLLLFYVFFEAMLIPMYFLIGVW-GGKNRI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 126 FGAIQSFMITVFGGLALLVGFIMLY----IMTGTNNITDILGqadHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRA 201
Cdd:PRK05846 161 YAATKFFLYTLLGSLLMLVAIIYLVvvyyNATGTFDIADLLN---LPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDA 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 202 MA-APTPVSAyLHSATMVKAGIFLLLRFtpLLGL----SNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLG 276
Cdd:PRK05846 238 HVqAPTAGSV-LLAGILLKMGAYGLLRF--SLPLfpdaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 277 MIMamVGIGGGYAQHQQdaiasiyvfvlfGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTI 356
Cdd:PRK05846 315 FVT--LGIFAGNQLGIQ------------GAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLF 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 357 AALSMAGVPFLNGFLSKEMFLdaltqtgqLSQFSLISMIAivFVGVIASIFTFTYALYMVKEVFWTKYDSKVFTKKNIHE 436
Cdd:PRK05846 381 FAMASLGLPGTSGFVGEFLIL--------LGSFQVNPVIA--FIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNG 450
|
490
....*....|....*
gi 505258908 437 PWLFSLPSLILMVLV 451
Cdd:PRK05846 451 RELLILLPLVALLLL 465
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
6-461 |
1.05e-38 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 150.27 E-value: 1.05e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 6 LLIAILVIMAMILLMSKRRAlaKYAGYIALVAPVISSIYFLIQIPSVAKLQYLST------------------------S 61
Cdd:COG1007 13 LLLGALVLLLLDLFLPRRSR--RLLAGLALLGLLLALALLLLALGGGTGTAFGGMfvvdgfalffkllillaallvlllS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 62 IPWIKTLDINldlRLDGLSLTLFM-FSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFmitVFGGL 140
Cdd:COG1007 91 RDYLERRGLL---RGEFYALLLFAtLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYF---LLGAL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 141 A---LLVGFIMLYIMTGTNNITDILGQ-ADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAM-AAPTPVSAYLhsA 215
Cdd:COG1007 165 SsgfLLYGISLLYGATGSLNLAGIAAAlAAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYeGAPTPVTAFL--A 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 216 TMVK-AGIFLLLRF--TPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAmvgigggyaqhq 292
Cdd:COG1007 243 TAPKiAAFAALLRLlvEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLL------------ 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 293 qdAIASIYVFVLFGALFHLMNHAIFKCALFMGVGIL-DHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFL 371
Cdd:COG1007 311 --GLAAGTPLGVSAALFYLLAYLFMNLGAFAVILLLsRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFF 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 372 SKEMFLDALTQTGqlsqfslisMIAIVFVGVIASIFTFTYALYMVKEVFWTKYDSKVftkkNIHEPWLFSLPSLILMVLV 451
Cdd:COG1007 389 GKFYVFSAAVEAG---------LYWLAVIAVLNSVISAYYYLRVVKAMYFDEPEEEA----PISAPPGLRVALVIAALLV 455
|
490
....*....|
gi 505258908 452 PVIFFVPNIF 461
Cdd:COG1007 456 LLLGIFPGPL 465
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-461 |
5.49e-37 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 145.34 E-value: 5.49e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 57 YLSTSIPWIKTLDINldlRLDGLSLTLFMFSM-----IGIVLSDNTILMYIFWELTSVSSFLLISYWYNNgDSQFGAIQS 131
Cdd:PRK06589 96 WICALLYTPKYLAIN---NIDSSSRFLFFFNLtiligVLIALSSDLFTMFVCYELLTISTAFLIGHTRNN-ISLSGGYKY 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 132 FMITVFGGLAL-LVGFIMLYIMTGTnniTDILGQADHIKNHGLFIPMIFMFLLGaftKSAQFPFHIWLPRAMAAPTPVSA 210
Cdd:PRK06589 172 LKILMISALLLfLPAVILIYTKTGN---LDFVSGGLFSKNQSIILLLMFIYGIA---KTAIFPVHSWLPAAMVAHYPVSA 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 211 YLHSATMVKAGIFLLLRFTPLL-GLSNMYIYIVTFVGLI-----TMLFGSITALKQWDLKGILAYSTISQLGMIMAMvgi 284
Cdd:PRK06589 246 LLHAVIVVKTGLFCIYKILLYIfGLSYLQRIFAEFNWLIfipivSIFYSSLKALKTDNIKKILAYSTISQLSLALLS--- 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 285 gggyaqhqqdaiASIYV-FVLFGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAG 363
Cdd:PRK06589 323 ------------AFILTpKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIG 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 364 VPFLNGFLSKEMFLDALTQTGQlsqfsLISMIAIVFVGVIASIFTFTYALYMVKEVFWTKYDSKVFTKKNIhePWLFSLP 443
Cdd:PRK06589 391 IPIFSGFISKFLILLAASEQNQ-----PWLSIIVMLVVIASSILSALYLLKILSSIYKPSLSENSFITKSL--PYLMQIS 463
|
410
....*....|....*...
gi 505258908 444 SLILMVLVPVIFFVPNIF 461
Cdd:PRK06589 464 VITCCCALTLFYFIQILI 481
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
6-450 |
3.00e-36 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 143.16 E-value: 3.00e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 6 LLIAILVIMAMILLM--SKRRALAKYAGYIALVAPVISSIYFLIQI-PSVAKLQYlSTSIPWIKTLDINLDLRLDGLSLT 82
Cdd:TIGR01972 3 LLIFLPLIGALLILLlpSNKDGKARWIALVVALATLLLSLLLLFQFdPTGSGFQF-TEDIPWIPALGISYHLGVDGISLL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 83 LFMFS--------------------------------MIGIVLSDNTILMYIFWELTSVSSFLLISYWynNGDSQFGAIQ 130
Cdd:TIGR01972 82 LVLLTalltllailaswesiqkrvkefyallllleagVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW--GGPNRIYAAM 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 131 SFMI-TVFGGLALLVGFIMLYIMTG-TNNITDILGQADHIKNHGLfipMIFMFLLGAFTKSAQFPFHIWLPRAMA-APTP 207
Cdd:TIGR01972 160 KFFLyTLAGSLLMLLAILGLYFLGGgTFDLLELLNLPLPFGVQTW---LFLAFFIAFAVKVPLFPLHTWLPDAHVeAPTA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 208 VSAYLhSATMVKAGIFLLLRFT-PLL-GLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAmvgig 285
Cdd:TIGR01972 237 GSVIL-AGVLLKMGTYGFLRFNlPLFpDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL----- 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 286 ggyaqhqqdAIASIYVFVLFGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVP 365
Cdd:TIGR01972 311 ---------GIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLP 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 366 FLNGFLSKEMFLdaltqTGQLSQFSLISMIAivfvgVIASIFTFTYALYMVKEVFW---TKYDSKVFTKKNIHEPWLFSL 442
Cdd:TIGR01972 382 GTSGFVGEFLIL-----LGSFKVNPVVAFLA-----ALGIVLAAAYMLTLYKRVFFgelSNPEVAEFPDLNGREIAVLAP 451
|
....*...
gi 505258908 443 PSLILMVL 450
Cdd:TIGR01972 452 LVVLILFL 459
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
88-471 |
1.06e-35 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 142.16 E-value: 1.06e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 88 MIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDIlgqADH 167
Cdd:PRK08376 134 MLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYL---AVK 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 168 IKNHGLFIPMI-FMFLLGAFT-KSAQFPFHIWLPRAM-AAPTPVSAYLHSATMvkAGIFLLLR--FTPLLGLSNMYI--Y 240
Cdd:PRK08376 211 MSENPTVVAKIaLALFIAGLAmKSGAVPVHMWLPDAYpAAPSSISAMLLVIKQ--AGLYALARvlFSIYGPAINLATvgW 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 241 IVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMamVGIGGGYAQHQQDAIASIYVFVLFGALFHLMNHAIFKCA 320
Cdd:PRK08376 289 VIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYML--LGLGVGLAALGDPAMASYGEIALAGGIYHIVNHALYKAL 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 321 LFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDAltqtgqlsqfsliSMIAIVFV 400
Cdd:PRK08376 367 LFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYES-------------SALFNPIL 433
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 505258908 401 GVIASIFT-FTYALYMvkEVFWTKY----DSKVFTKKNIHEPWLfsLPSLILMVLVPVIFFVPNIFGKGIIVPALR 471
Cdd:PRK08376 434 GVIAMIGSvLTLASFV--KVFHTAFfgppSEKVMNVKEPPKPML--VPMLILAIAIIGMGLFPWQISDKLMAPAAK 505
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
81-468 |
3.56e-35 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 142.06 E-value: 3.56e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 LTLFMFS-MIGIVLSDNTILMYIFWELTSVSSFLLISYwyNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNIT 159
Cdd:PRK08668 103 FALMSLAgVLGVFLANDLLTLYIFWEIMTFSSFMMVPM--GKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFA 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 160 DILgQADHIKNHGLFIPMIFMFLLGA-FTKSAQFPFHIWLPRAMA-APTPVSAYLhSATMVKAGIFLLLRFTPLLGLSNM 237
Cdd:PRK08668 181 DIS-QGLINDTSTGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSeAPQSFSAVL-SGQLSKLGAYGFLLVLYVLPGTKL 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 238 YI------------YIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAqhqqdaiasiyvfvLF 305
Cdd:PRK08668 259 FSefgtyrgvplfnYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLG--------------FA 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 306 GALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGq 385
Cdd:PRK08668 325 GGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKG- 403
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 386 lsqfslisMIAIVFVGVIASIFTFTYALYMVKEVFWTKYDSKVftkKNIHEPWLFSLPSLILMVLVPVIF---------F 456
Cdd:PRK08668 404 --------MPITAFMAFFGSIGSFLYVFRPLAGVFLGQLPSDH---KDVKEAPLPMLIPMAILVLLNVVFgvapglvlqE 472
|
410
....*....|..
gi 505258908 457 VPNIFGKGIIVP 468
Cdd:PRK08668 473 INKIFGELGIGP 484
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-412 |
3.24e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 133.92 E-value: 3.24e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 3 LVYLLIAILVIMAMILLMSKRRALAKYagyIALVAPVISSIYFLIQIPSVAKLqylstsipwiktLD-INLDLRLDGLSL 81
Cdd:PRK07234 6 PVWIALPFLLGFAIYLLPKLDRNLALG---MAIVSAVYALGLVASMVPLELTL------------LDnFGVTLRADALSG 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 82 ----------------------TLFMFSMIGIVL--------SDNTILMYIFWELTSVSSFLLISYwyNNGDSQF-GAIQ 130
Cdd:PRK07234 71 yfiltnalvtlavifycwesakTRFFYAQLLILHgsvnaafvCADLISLYVALEVLSIATFLLVAY--PRTDRAIwVGLR 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 131 SFMITVFGGLALLVGFIMLYIMTGTNNITDiLGQADhiknhGLFIPMIFMFLLgafTKSAQFPFHIWLPRAMAAPTPVSA 210
Cdd:PRK07234 149 YLFYSNVAMLFYLIGAVLVYQANGTFAFSG-LATAD-----PEAFALIALGLL---VKGGIFVSGLWLPLTHSEAEPPVS 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 211 YLHSATMVKAGIFLLLRFTPLLGLSNMyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGgyaq 290
Cdd:PRK07234 220 ALLSGVVVKAGVFPLVRCALDVPGLDL---IVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVGG---- 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 291 hqqdaiasiyvfvlfgaLFHLMnHAIFKCALFMGVGILDheagSRDIRILSGMRQLFPKMnLVMTIAALSMAGVPFLNGF 370
Cdd:PRK07234 293 -----------------LYALA-HGLVKSTLFLCAGALP----SRNFTELISQMLGIGKW-IPLTMASFSIAGFPLLAGF 349
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 505258908 371 LSKEMFLDALTQTGQLsqfslisMIAIVFVGVIASIFTFTYA 412
Cdd:PRK07234 350 VSKVLTLKNLLPWQAI-------ALNLAAVGTAASFWKFIFL 384
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
10-457 |
8.43e-33 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 132.64 E-value: 8.43e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 10 ILVIMAMILLMS---KRRALAKYAGYIALVAPVISSIYFLIQIP----------------SVAKLQYLSTSIPWIKTLDI 70
Cdd:PRK05777 16 ILLGAAVVLLLIdafVRRHSRRATLAVLALLLALVALLFVLGAAgggtafggmlvvdgfaLFLKGLILLASLLALLLARP 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 71 NLDLRLDGLSLTLFMFSMIGIVL---SDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFI 147
Cdd:PRK05777 96 YLEDRGRGEFYLLVLFALLGMMVmvsANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMS 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 148 MLYIMTGTNNITDIL-GQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAM-AAPTPVSAYLHSATMVkAGIFLL 225
Cdd:PRK05777 176 LLYGATGSLSFAGIAkALADGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVL 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 226 LRF--TPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAmvgiggGYAQHQQDAIASIYVFV 303
Cdd:PRK05777 255 LRLlvVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLV------GLAAGTAEGYSAVLFYL 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 304 LfgaLFHLMNHAIFKCALFMgvgiLDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQT 383
Cdd:PRK05777 329 L---AYLFMTLGAFGVISLL----RRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEA 401
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 505258908 384 GqlsqfslisMIAIVFVGVIASIFTFTYALYMVKEVFwtkydskvFTKKNIHEPWLFSLPSLILMVLVPVIFFV 457
Cdd:PRK05777 402 G---------LWWLAVIGVLNSAIGAFYYLRVIKLMY--------FDEPPRDAPVNWPLSAGGAVLSVSALLVL 458
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
87-379 |
1.40e-31 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 130.40 E-value: 1.40e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 87 SMIGIVLSDNTILMYIFWELTSVSSFLLIsyWYNNGDSQFGA-IQSFMITVFGGLALLVGFIMLYIMTGTNNITDILGQA 165
Cdd:PRK12668 105 SALGAVFAGDLLTLFVFWELMAFTSTFLV--WARGTKAAVRAgFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLG 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 166 DhiknhglfiPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRftpllGLSNMYIYIvtFV 245
Cdd:PRK12668 183 G---------TAAWLILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR-----AFPGTELLI--YI 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 246 GLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQHqqdaiasiyvfvlfGALFHLMNHAIFKCALFMGV 325
Cdd:PRK12668 247 GAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAIN--------------GAVAHAFNHILYKGLLFMSA 312
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 505258908 326 GILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDA 379
Cdd:PRK12668 313 GAVLYRTGTEKLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMIISA 366
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
1-454 |
2.18e-31 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 128.89 E-value: 2.18e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 1 MSLVYLLIAILVIMAMILLMSKRRALAKY---------AGYIALVAPVIS----------------SIYFLIQIPSVakl 55
Cdd:PRK06458 5 ILFALLLLIPLLASLLLFALRKRRLVATLnvlgitltlILALWLVFTVPDageifaaglwffiddlNVFFLALIGVV--- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 56 qYLSTSIPWIKTLDINLD--------LRLDGLSLTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYwYNNGDSQFG 127
Cdd:PRK06458 82 -GFLTSLYSIGYMRHEVEhgelspvtLRLYYGMYQLFLFTMLLALTSNNLGLMWVAIEATTLSSALLVGI-YRTRASLEA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 128 AIQSFMItVFGGLAL-LVGFIMLY-----IMTGTNNI---TDILGQADHIKNHGLFIPMIFMfLLGAFTKSAQFPFHIWL 198
Cdd:PRK06458 160 AWKYIII-CSVGVAFaLFGTILVYanaatVMGDGEMAilwTELLKHASLLDPTLMKLAFVFL-LIGFGTKVGLFPMHAWL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 199 PRAMA-APTPVSAYLhSATMVKAGIFLLLRFTPLLGLSNMYIY----IVTFvGLITMLFGSITALKQWDLKGILAYSTIS 273
Cdd:PRK06458 238 PDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDAAIGSDFpgrlLLIF-GLLSVLVAAFFLLRQRDIKRLFAYSSIE 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 274 QLGMIMAMVGIGGGYAqhqqdaiasiyvfvLFGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLV 353
Cdd:PRK06458 316 HMGLIAFALGIGGPLG--------------IFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWG 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 354 MTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLSQFS-LISMIAIVFVGVIasiftftyalYMVKEVfwtkydskVFTKK 432
Cdd:PRK06458 382 LMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAIlLLLLLTLAFAALV----------RRVAGM--------VFGEP 443
|
490 500
....*....|....*....|....*..
gi 505258908 433 NI-----HEPWLFSLPSLILMVLVPVI 454
Cdd:PRK06458 444 PEavnrgDLGWLTTSPMFVHLVLVLVL 470
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
83-461 |
1.39e-30 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 126.42 E-value: 1.39e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 83 LFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYwYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDIL 162
Cdd:PRK08377 116 LLMLGATGMIATGDIFNLFVFMEITAITAYALTAY-NKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 163 GQADHIKNHGLFIPMIFMFLlGAFTKSAQFPFHIWLPRA-MAAPTPVSAyLHSATMVKAGIFLLLRFTPLLGLSNMY--- 238
Cdd:PRK08377 195 QLAGTIDPTVAQVGLALLIF-GLAVEAELFPLNAWAPDAyQAAPHPITV-MFSAFVVKAGLYAMARILYLMQNANGWssv 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 239 IYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGggyaqhQQDAIAsiyvfvlfGALFHLMNHAIFK 318
Cdd:PRK08377 273 LKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALG------TQAGVD--------AGVFHMINHAIVK 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 319 CALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLSQFSLIsmiaiv 398
Cdd:PRK08377 339 ALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALV------ 412
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 505258908 399 fvgVIASIFTFTYALYMVKEVFWTKydskvfTKKNIHEPWLFSLPSLILMVLVPVIFFVPNIF 461
Cdd:PRK08377 413 ---LGASVVEAVYYFRLIHTMWFKG------EGERIRENAAIGIILLLLAALIVVIGIYPTPF 466
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
81-407 |
1.49e-29 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 123.84 E-value: 1.49e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYwYNNGDSQFGAIQSFMITVFGGLALLVgFIMLYIMTGTNNItd 160
Cdd:MTH00063 82 IVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILF-YDNFLSLRASVVTLVSSRFGDVCLFL-LIGLSCWGGSGSF-- 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 161 ilgqadhiknhglfiPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNmYIY 240
Cdd:MTH00063 158 ---------------LCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSW-LSI 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 241 IVTFVGLITMLFGSITALKQWDLKGILAYSTISQlgmimamvgigggyaqhqqdaIASIYVFVLFG----ALFHLMNHAI 316
Cdd:MTH00063 222 FFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNN---------------------ISWCVLYLIYGdvilSLFQLVSHGV 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 317 FKCALFMGVG-ILDHEAGSRDIR-----ILSGMRQLFpkmnlVMTIAALSMAGVPFLNGFLSKEMFLDALTqtgqlSQFS 390
Cdd:MTH00063 281 SKCLLFMLVGdVMSGSGGSQSSNcvyssILYGSWNLF-----YLFLLVLGLSGVPFIGVFFSKHFLLSSFS-----SVVF 350
|
330
....*....|....*..
gi 505258908 391 LISMIAIVFVGVIASIF 407
Cdd:MTH00063 351 NVSLLLVVILCVFLSYL 367
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
23-451 |
2.01e-28 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 121.17 E-value: 2.01e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 23 RRALAKYAGYIALVAPVISSIYFLIQIPSVAKLQYLSTSIPWIKTLDINLDLRLD-------------GLSL-------- 81
Cdd:PRK07390 32 RRTGPRPAAYLNLLMTLLAFVHSLLALRAIWNQPPQQLSFPWLQVADLDLSLSLEispvtlgalelitGLSLlaqiyalg 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 82 ---------------TLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGF 146
Cdd:PRK07390 112 ylekdwglarffallGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGV 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 147 IMLYIMTGTNNITDILGQADHIKnhglfIPMIFMFLL------GAFTKSAQFPFHIWLPRAMAAPTPVSAyLHSATMVKA 220
Cdd:PRK07390 192 VALSPLAGTLNFSDLAAWAATAN-----LDPLTATLLglaliaGPTGKCAQFPLHLWLDEAMEGPNPASI-LRNSVVVAT 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 221 GIFLLLRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIgggyaqhQQDAIasiy 300
Cdd:PRK07390 266 GAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGL-------QQPDI---- 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 301 vfvlfgALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSkemfldal 380
Cdd:PRK07390 335 ------ALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA-------- 400
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 505258908 381 tqtgQLSQFSLISMIAIVFVGVIASIFTFTyALYMVKE---VFWTKydSKVFTKKNIHEPWLFSLPSLILMVLV 451
Cdd:PRK07390 401 ----LLRLADGLWAVSPWLVGVLLLVNALT-AFNLTRVfrlVFLGK--PQQKTRRSPEVLWPMALPMVILAGFT 467
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
80-383 |
6.78e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 118.30 E-value: 6.78e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 80 SLTLFMFS-MIGIVLSDNTILMYIFWELTSVSSFLLISYWyNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNI 158
Cdd:PRK12662 114 SAFLLCLGgLLGILVSNDVFNIYVFLEISSISSYVLVAMG-RDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNM 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 159 TDI-LGQADHIKNHGLFIPMIFMFLlGAFTKSAQFPFHIWLPRAM-AAPTPVSAYLhSATMVKAGIFLLLR--------- 227
Cdd:PRK12662 193 GDMfLIIQDLPTNRAIQIGVLFIMV-GLFIKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRivydvfkan 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 228 -FTPLLGLSNMYIyivtFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAqhqqdaiasiyvfvLFG 306
Cdd:PRK12662 271 fVFTTLPFNNVFM----ILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYG--------------LAA 332
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 505258908 307 ALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQT 383
Cdd:PRK12662 333 AVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKS 409
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
81-451 |
3.32e-27 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 116.20 E-value: 3.32e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQfGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITD 160
Cdd:PRK12663 114 ILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQEREQLR-GAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAH 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 161 ILGQADHIKNHGLfIPMIFMFLLGAFT-KSAQFPFHiWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYI 239
Cdd:PRK12663 193 IAMRLNDMGDTAT-LTTIALLFLLAFGmKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQEREL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 240 --YIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAqhqqdaiasiyvfvLFGALFHLMNHAIF 317
Cdd:PRK12663 271 lhPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAG--------------INGAIFYLVHDMVV 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 318 KCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQlsqfsLISMIAI 397
Cdd:PRK12663 337 KTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGA-----YILLALM 411
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 505258908 398 VFVGVIASIFTFTYALYMvkevFWTKYDSKVFTKKNIhePWLFSLPSLILMVLV 451
Cdd:PRK12663 412 LITSLITMYSLFRIFFLA----YWGDKDGEEVNFKPI--PLYRKLPLSILAVVV 459
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
80-373 |
1.61e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 114.28 E-value: 1.61e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 80 SLTLFMFS-MIGIVLSDNTILMYIFWELTSVSSFLLISYwynnGDSQFGAIQSF---MITVFGGLALLVGFIMLYIMTGT 155
Cdd:PRK07691 112 PSVLFMLAgVNGAFLTGDIFNLFVFFEVMLMASYVLIVI----GGTKIQLRESIkyvLINVVSSAFFVVAVAILYSVVGT 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 156 NNITDILGQADHIKNH--GLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLG 233
Cdd:PRK07691 188 LNMADISVKIAELSAGqtGLITVVAILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFF 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 234 LSNMYI--YIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGggyaqhQQDAIAsiyvfvlfGALFHL 311
Cdd:PRK07691 268 SHDTSFthYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMM------TESGMI--------GAIYYL 333
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 505258908 312 MNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSK 373
Cdd:PRK07691 334 IHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGK 395
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
6-459 |
6.32e-26 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 112.49 E-value: 6.32e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 6 LLIAILVIMAMILLMSKRRALAKYAGYIALVAPVIS---SIYFLIQIPSVAKLQYLSTSIPWIKTLDINLDLRLDGLSLT 82
Cdd:PRK06473 4 ALIWIPLLGAILIGFWPSGINGKLARSVALVIASVLlllSLVLAFQFDPGNPNQQFTEFIPWIDSLGLSYHLGVDGLSLP 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 83 L-----------------------FMFSMI--------GIVLSDNTILMYIFWELTSVSSFLLISYWynNGDSQFGAIQS 131
Cdd:PRK06473 84 LlvlnslltliaiyssdesiqrprFYYSLLlllnagvsGAFLAQDLLLFFLFYELELIPLYLLIAIW--GGQRRGYAATK 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 132 FMI-TVFGGLALLVGFIMLYIMTGTNNItDILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRA-MAAPTPVS 209
Cdd:PRK06473 162 FLLyTAISGILILVSFLGLVWLSGASSF-DYEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAhVEASTPVS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 210 AYLhSATMVKAGIFLLLRFTPLLgLSNMYIYIVTFVG---LITMLFGSITALKQWDLKGILAYSTISQLGMIMAmvgigg 286
Cdd:PRK06473 241 VLL-AGVLLKLGTYGLLRFGVGL-FPEAWVYLAPWLAtwaVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILL------ 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 287 gyaqhqqdAIASIYVFVLFGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGM---RQLFPKMNLVMTIAALSMAG 363
Cdd:PRK06473 313 --------AAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAG 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 364 VPFLNGFLSkemflDALTQTGQLSQFSLISMIAIVFVGVIAsiftfTYALYMVKEVFWTKYDSKVFTKKNIHepWLFSLP 443
Cdd:PRK06473 385 IPGMVGFIA-----EFLVFRGSFPIFPVQTLLCMIGTGLTA-----VYFLLLVNRVFFGRLTAELSNLPRVL--WSERLP 452
|
490
....*....|....*.
gi 505258908 444 SLILMVLVPVIFFVPN 459
Cdd:PRK06473 453 ALVLAVLIVVLGIQPS 468
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
82-423 |
1.54e-24 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 107.73 E-value: 1.54e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 82 TLFMFSMIGIVL---SDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNI 158
Cdd:TIGR01770 106 ILLLFALLGIFLlvsSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNF 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 159 TDILGQ--ADHIKNHGLFIPMIFMfLLGAFTKSAQFPFHIWLPRAM-AAPTPVSAYLHSATMVkAGIFLLLR--FTPLLG 233
Cdd:TIGR01770 186 EDLLLFlsNGMLNISLLLLGIVLI-LVGLLFKLSAVPFHMWVPDVYeGAPTPVTAFFSIVPKI-AIFAVFLRlfLYILFG 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 234 LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAmvgiggGYAQHQQDAIASIYVFVLfgaLFHLMN 313
Cdd:TIGR01770 264 FSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILI------GLLAGTLEGIKAVLFYIF---IYALMS 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 314 HAIFKCALFMGVGildheaGSRDIRILSGMRQLF---PKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGqlsqfs 390
Cdd:TIGR01770 335 LGAFGVLSLLRSY------KDEWIEYISDFAGLFktnPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSG------ 402
|
330 340 350
....*....|....*....|....*....|...
gi 505258908 391 lisMIAIVFVGVIASIFTFTYALYMVKEVFWTK 423
Cdd:TIGR01770 403 ---LYWLAVIAVLTSVIGAFYYLRVVKVMYFDK 432
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
87-416 |
2.85e-22 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 100.88 E-value: 2.85e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 87 SMIGIVLSDNTILMYIFWELTSVSSFLLIsYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDILGQAD 166
Cdd:PRK06277 112 SVSAIVLADDIFNLYVFFEIAAIVQVGLV-IASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNALL 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 167 HIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTP-VSAYLHS---ATMVKAGIFLLLRFTPLLGLSNMYIYIV 242
Cdd:PRK06277 191 VNPTSPVIYGGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIFKLFGGLSYFPSAQGVLI 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 243 tFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAqhqqdaiasiyvfvLFGALFHLMNHAIFKCALF 322
Cdd:PRK06277 271 -ALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLG--------------IVAGIFHAINHVIYKSALF 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 323 MGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGqlsqfslISMIAIVFVGV 402
Cdd:PRK06277 336 LGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQAN-------MPELAIIMIIV 408
|
330
....*....|....*
gi 505258908 403 -IASIFTFTYALYMV 416
Cdd:PRK06277 409 sIGTFVSMMKAFYLI 423
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
133-423 |
7.69e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 100.04 E-value: 7.69e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 133 MITVFGGLALLVGFIMLYIMTGTNNITDILGQADHIKNhGLFIpMIFMFLLGAF-TKSAQFPFHIWLPRAM-AAPTPVSA 210
Cdd:PRK12665 168 MVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELPS-GTRT-ALFAVLLVAFgIKAAVFPLSFWLPDSYpTAPAPVTA 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 211 YLhSATMVKAGIFLLLRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLG-MIMamvGIGGGYA 289
Cdd:PRK12665 246 VF-AGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGyMVF---GIALSTV 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 290 QHqqdaiasiyvfvLFGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNG 369
Cdd:PRK12665 322 AG------------LSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSG 389
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 505258908 370 FLSKEMFLDALTQTGQLSQFSLISmiaivfVGVIASIFTftyaLYMVKEVfWTK 423
Cdd:PRK12665 390 FIGKVALLEAGAEDGTWLAWALVA------GGVVTSLLT----LYAVARV-WTK 432
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
91-326 |
8.69e-22 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 99.77 E-value: 8.69e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 91 IVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDIlgqADHIKN 170
Cdd:PRK08168 116 LVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSAL---WAHLAA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 171 HGLFIPMIFMFLLGAFT---KSAQFPFHIWLPRAMAAPTPVSAYLHsATMVKAGIFLLLRFTPLLGLSNMYIYIVTFVGL 247
Cdd:PRK08168 193 QGASPSLQAAALLLVLAvilKTAQLPVHGWLIQVMEAPTPVSALLH-AGVVNLGGFVLIRFAPLLEQAPPARWLLVLVGL 271
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 505258908 248 ITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaiasIYVFvlfgALFHLMNHAIFKCALFMGVG 326
Cdd:PRK08168 272 ATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLG-------------LYEL----ALLHLVAHSLYKAHAFLSAS 333
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
193-370 |
1.53e-21 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 99.52 E-value: 1.53e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 193 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYIYIVTFV-GLITMLFGSITALKQWDLKGILAYST 271
Cdd:PRK08042 198 PLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVlGMITAFVGGLYALMEHNIQRLLAYHT 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 272 ISQLGMIMAMVGIG-GGYAQHQQDAIAsiyvFVLFGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKM 350
Cdd:PRK08042 278 LENIGIILLGLGAGvTGIALEQPALIA----LGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVI 353
|
170 180
....*....|....*....|
gi 505258908 351 NLVMTIAALSMAGVPFLNGF 370
Cdd:PRK08042 354 SIAMLVGLMAMAALPPLNGF 373
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
42-459 |
1.54e-21 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 99.02 E-value: 1.54e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 42 SIYFLIQI-PSVAKLQYlSTSIPWIKTLDINLDLRLDGLSLTLFM-----------------------FSMI-------- 89
Cdd:PRK07363 43 SLFLLTQFdLSDPGMQF-QEYLPWNEPLGLSYSLGVDGLSLPLLVlnslltwiaiysigenterprlyYSLIllinggia 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 90 GIVLSDNTILMYIFWELTSVSSFLLISYWynNGDSQFGAIQSFMI-TVFGGLALLVGFIMLYIMTGTNNIT-DILGQADH 167
Cdd:PRK07363 122 GALLAQNLLLFFLFYELELIPFYLLIAIW--GGEKRGYASIKFLIyTAVSGLLVLAAFLGIVWLSGSTSFDyDAISTQNL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 168 IKNHGLFipMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTplLGLSNMYIYIVT---- 243
Cdd:PRK07363 200 SLNTQLI--LLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQTWSLVApgla 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 244 FVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAqhqqdaiasiyvfvLFGALFHLMNHAIFKCALFM 323
Cdd:PRK07363 276 IIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLS--------------LLGAVAQMISHGLILALLFH 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 324 GVGILDHEAGSRDIRILSGM----RQLfPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDaltqtGQLSQFSLISMIAIVf 399
Cdd:PRK07363 342 LVGIVERKVGTRDLDVLNGLmnpiRGL-PLTSALLVLAGMASAGIPGLVGFVAEFIVFQ-----GSFSTFPIPTLLCIV- 414
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 400 vgviASIFTFTYALYMVKEVFWTKYDSKVFTKKNIHepWLFSLPSLILMVLVPVIFFVPN 459
Cdd:PRK07363 415 ----ASGLTAVYFVILLNRTCFGRLDNKLAYYPKVL--WSEKIPALILTALILFLGVQPN 468
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
85-460 |
9.77e-21 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 95.78 E-value: 9.77e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 85 MFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDILGQ 164
Cdd:MTH00206 102 QLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFS 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 165 ADHIKNHGLFIPMIFMFLLgafTKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLLRFTPLLG-LSNMYIYIV 242
Cdd:MTH00206 182 KLTTWNNNLWWLACILAFL---VKLPLYGVHLWLPKAhVEAPVAGSMVL-AGVLLKLGGYGMMRIILILGpSTKLSSYFF 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 243 TFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAmvgigggyaqhqqdAIASIYVFVLFGALFHLMNHAIFKCALF 322
Cdd:MTH00206 258 IILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTA--------------GILSGSPWGFKGALLLMIAHGLVSSALF 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 323 MGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAAL-SMAGVPFLNgfLSKEMFLdaltqtgqlsQFSLISM--IAIVF 399
Cdd:MTH00206 324 CLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLaNLGLPPFPN--LFGELLI----------ITSLFSWsnFTLPL 391
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 505258908 400 VGvIASIFTFTYALYMVKEVFWTKYDSKVFTKKNIHEPWLFslpsLILMVLVPVIFFVPNI 460
Cdd:MTH00206 392 LG-LGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHL----LLFLHLFPVILLILNP 447
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
10-404 |
1.28e-20 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 96.40 E-value: 1.28e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 10 ILVIMAMILLMSKRRALAKYAGYIALV-APVISSIYFLIQIPSVAKLQYLSTSIPWIKTLDINLDL-RLDGLSLTLFMFS 87
Cdd:PRK06459 2 LLYILPVFLISILLSIFNKKASYILTMiSSIILLITSIYEYNGVLSFFSIISTIVWILASLYSIEYdHYGKWLSSLYILT 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 88 MIGIVL---SDNTILMYIFWELTSVSSFLLISYWYNNGDSqfgaiqSFMITVFGGLA---LLVGFIMLYIMTGTNNITDI 161
Cdd:PRK06459 82 ILGMAIvltSDNYLLFLAGWEIMTIPSYVAIALTKKNKRP------AFVFMAFGELStvlILAGFAWAFIISGTTNFSYL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 162 LGQAdhiknhglfiPMIfMFLLGAFTKSAQFPFHI--WLPRAMA-APTPVSAYLhSATMVKAGIFLLLRFTPLLGLS--N 236
Cdd:PRK06459 156 PSPV----------PLI-LASFGFIIKMGMMPFLVseWLPIAHGnAPSNFSAIL-SATMTLMGVYGILKMTILTQTIpiG 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 237 MYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQHQQDaiasIYVFVLFGALFHLMNHAI 316
Cdd:PRK06459 224 YFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLYMVTKQLITS----IEHFSLITVILYSFAHSV 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 317 FKCALFMGVGILDHEAGSRDIRILSGMrqlfpkMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLSqFSLISMIA 396
Cdd:PRK06459 300 AKTGLFLSSGLQEKQSITYSKKIRNRW------IELGLTLLASSLSGLLPNIGGVASWLLLESLFMFAYVL-HNVISILF 372
|
....*...
gi 505258908 397 IVFVGVIA 404
Cdd:PRK06459 373 IVTGAIIA 380
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
50-428 |
1.85e-20 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 95.48 E-value: 1.85e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 50 PSVAKLQyLSTSIPWIKTLDINLDLRLDGLSL------------------------TLFMFSM-------IGIVLSDNTI 98
Cdd:PRK12561 32 PSSSSLQ-LVERYAWLPQIGLEWSLGVDGLSMplvllsglittlsifaswkvtrkpRLFYFLMlvlysaqIGVFLAQDLL 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 99 LMYIFWELTSVSSFLLISYWYNNgDSQFGAIQSFMITVFGGLALLV-GFIM-LYIMTGTNNITDiLGQADHIKNHGLFIp 176
Cdd:PRK12561 111 LFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASIFILVaGLALaLSGDTFTFDLAE-LGAKSYPLALELLL- 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 177 mIFMFLLGAFTKSAQFPFHIWLPRAMA-APTPVSAYLhSATMVKAGIFLLLRFTPLLgLSNMYIY---IVTFVGLITMLF 252
Cdd:PRK12561 188 -YAGFLIAFGVKLPIFPLHTWLPDAHGeASAPVSMIL-AGVLLKMGGYALIRFNVQM-LPDAHVYfapALAILGVVNIIY 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 253 GSITALKQWDLKGILAYSTISQLGMIMamvgIGggyaqhqqdaIASIYVFVLFGALFHLMNHAIFKCALFMGVGILDHEA 332
Cdd:PRK12561 265 GALNAFAQDNVKRRLAYSSVSHMGFVL----LG----------IAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERT 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 333 GSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEM-FLDALTQTGQLSQFSLIsmiaIVFVGVIASIFTFTY 411
Cdd:PRK12561 331 HTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTvFLGITSSDVYSSTFRTI----TILLAAVGLILTPIY 406
|
410
....*....|....*..
gi 505258908 412 ALYMVKEVFWTKYDSKV 428
Cdd:PRK12561 407 LLSMLRRVFYGPRSELL 423
|
|
| MnhB |
COG2111 |
Multisubunit Na+/H+ antiporter, MnhB subunit [Inorganic ion transport and metabolism]; |
3-748 |
2.46e-20 |
|
Multisubunit Na+/H+ antiporter, MnhB subunit [Inorganic ion transport and metabolism];
Pssm-ID: 441714 [Multi-domain] Cd Length: 750 Bit Score: 96.31 E-value: 2.46e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 3 LVYLLIAILVIMAMILLMSKRRALAKYAGYIALVAPVISSIYFLIQIPSVAKLQYLSTSIPWIKTLDINLDLRLDGLSLT 82
Cdd:COG2111 5 LLLLLLLLLLLLLALLLLLLLLLLLLALAAAALAALLALLAALALLLAATAAAAALALLLLLLLLAALLLLLLLLLLLLL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 83 LFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDIL 162
Cdd:COG2111 85 LLLLLLLLLLLLLLLLLGALLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLSLLLLLLLLLLLLLAAAAAAAAAALLG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 163 GQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLSNMYIYIV 242
Cdd:COG2111 165 GGGGALLLLLLLLLLLGLLALAAAAALALLLLLLLPLLLALALAAAAAAAAAAAALLFFLFLAAAAAAAAAAAALAAAAA 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 243 TFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQHQQDAIASIYVFVLFGALFHLMNHAIFKCALF 322
Cdd:COG2111 245 AAVAVVALLLLLALVAGLLLLLLLLLLLLLLLLLLLGLLGALLLLLLLLLLLLLLLLLLLLLLLLLLLGLLLAAAAAAAA 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 323 MGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLSQFSLISMIAIVFVGV 402
Cdd:COG2111 325 ALLALLLLLALALLLLLALALAAGLGLRLLLLLLLRLLAALLAAAAAAALAAAAALLLLLLLLLLALLLALGLLGLLLLL 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 403 IASIFTFTYALYMVKEVFWTKYDSKVFTKKNIHEPWLFSLPSLILMVLVPVIFFVPNIFGKGIIVPALRGVSGGNHQIDP 482
Cdd:COG2111 405 AALLAAAALLAAAAAAALALALLGGALAAAPAAAAAALLLLLLLLLALLLLALLLLLLLLLALLLLLLLAVAALVALLLL 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 483 LAPHVSQWHGFNIPLLLTIIIILLGSVLAIKVDWKKVFTGKIRQISVSKGYEMVYRHFEKFATKRFKRVMQDRLNQYIIM 562
Cdd:COG2111 485 LLLLLLLLLVLVLLLLLLLLLLLLLLLLLLLLRAAARAALLALAAAAAGAAAYALALGLLLVAAASTTGGGGGGLLLGLL 564
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 563 TLGIFMIIIGYGYIRIGLPKVHQLHVSEFGALEIILAIVTVTIGISL--IFIRQRLTMVILNGVIGFVVTLFFIAMKAPD 640
Cdd:COG2111 565 GVVVVVVVLVLVLLLLALGLVLLLLLARLGALALLLLLLLALLVAAAaaSLILSRLTRVLLPGILGFSVYLFFRGHNAPG 644
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 641 LALTQLVVETITTILFIVSFSRLPNVPRSNankKREIIKISVSLLMALIVVSLIFItqqtdglssISDFYLKADKL--TG 718
Cdd:COG2111 645 GGFTGGLVEALALILLYLALGRLWVEERLP---VDALILIGVGLLLAALTGLAALL---------FGGPFLTSAFLplAG 712
|
730 740 750
....*....|....*....|....*....|
gi 505258908 719 GKNIVNAILGDFRALDTLFEGLVLIITGLG 748
Cdd:COG2111 713 GLNLVNAILFDFGVFDTVGGITVLILAALG 742
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
2-457 |
1.11e-19 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 92.90 E-value: 1.11e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 2 SLVYLLIAILVIMAMILLMSKRRALAKYAGYIALVAPVIS---------------SIYFLIQIPSVakLQYLSTSI---- 62
Cdd:PRK08676 1 IIVYYLLVALLFLRLGLLSRSHRLLNALALGHGLWHLGLSlwvllvlplpgyfmeSRYLFIDHLGI--FVVLIASVvfil 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 63 ------PWIKTLDINLDLRLDGLSLTLFMFSMIGIVL-----SDNTILMYIFWELTSVSSFLLISYwYNNGDSQFGAIQS 131
Cdd:PRK08676 79 aalyarGYVDHLLSNGELDPENLKVFYLGFNLLLSVItfaffSDNLALFWIFAELTTVFSAMLIAI-LSARENIDAALKY 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 132 FMITVFGGLALLVGFIMLYIMT------GTNNITDILGQADHIKNHGLFIPMIFMFLlGAFTKSAQFPFHIWLPRAMA-A 204
Cdd:PRK08676 158 IFIASTAMIFAFIGLIFLFSLTrqalgtGTLNWTELAAHASLLSPSVLGASFLFIFI-GFLAKSGLVPFHTWLPAAYAkA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 205 PTPVSAYLhSATMVKAGIFLLLRFTPLL---GLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAM 281
Cdd:PRK08676 237 PSVVSALL-SGTVLNIGIYGILRLSALLrqsGAAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLG 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 282 VGIGGGYAqhqqdaiasiyvfvLFGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSM 361
Cdd:PRK08676 316 IGIGTPLA--------------LFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAI 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 362 AGVPFLNGFLSKemfLDALTQTGQLSQFslISMIAIVFVGVIASIFTfTYALYMVKEVFWTKYDSKVFtkkniHEPWLFS 441
Cdd:PRK08676 382 IGMPPFPLFLSK---FFILLQLGGISVW--LVLAVLLLLLLAASSFA-IFLLKAFTRVSEGNADRPVF-----RTPLSMK 450
|
490
....*....|....*.
gi 505258908 442 LPSLILMVLVPVIFFV 457
Cdd:PRK08676 451 LPIVIILALVLALGVY 466
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
90-417 |
8.07e-18 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 87.41 E-value: 8.07e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 90 GIVLSDNTILMYIF--WELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLY-IMTGTNNITDILGQAD 166
Cdd:PRK02504 123 GMFLSGATELVMIFisLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYgLSGGSTQLSAIALALI 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 167 HIKNHGLFIPMIFMFLLGAFtKSAQFPFHIWLPRAM-AAPTPVSAYLhSATMVKAGIFLLLRF--TPLLGLSNMYIYIVT 243
Cdd:PRK02504 203 TSPSLGLALALVFVIAGIAF-KISAVPFHQWTPDVYeGSPTPVVAFL-SVGSKAAGFALAIRLlvTAFPSFDEQWKLLFT 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 244 FVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMamVGIGGGyaqhQQDAIASIyVFVLFGALFhlMNHAIFKCALFM 323
Cdd:PRK02504 281 ALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM--IGLVAG----TEAGYASM-VFYLLAYLF--MNLGAFACVILF 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 324 GVgildhEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLsqfslismiAIVFVGVI 403
Cdd:PRK02504 352 SL-----RTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGLY---------LLVLVGLV 417
|
330
....*....|....
gi 505258908 404 ASIFTFTYALYMVK 417
Cdd:PRK02504 418 TSVISIYYYIRVIK 431
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
134-410 |
1.44e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 86.44 E-value: 1.44e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 134 ITVFGGLALLVGFIMLYIMTGTNNITDILGQADHI--KNHGLFIPMIfMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVS 209
Cdd:PRK12666 167 INLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLpaADRALLEAGA-ALLLVVFlIKAAMWPLNFWLPPAyAAASAPVA 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 210 AYLhsATMVKAGIFLLLRFTPLL------GLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVG 283
Cdd:PRK12666 246 ALF--AIMTKVGIYAILRLSTLLfgpeagASAGFGQDWLLPGGLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIG 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 284 IGggyaqhQQDAIAsiyvfvlfGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMT-------- 355
Cdd:PRK12666 324 LG------NPAATA--------AALYYLVHSTLAAAALFLLADLVERQRGAAADRLAVTPELYDLDEEEEEEvgvaipat 389
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 505258908 356 ---------IAALSMAGVPFLNGFLSKEMFLDALTQTGQLSQFSLIsmIAIVFVGVIASIFTFT 410
Cdd:PRK12666 390 mallgllffICALALAGLPPLSGFLGKFALLQALLNPPGAGAAWWL--WALVLLSGLAALIALT 451
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
93-326 |
3.26e-17 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 85.47 E-value: 3.26e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 93 LSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDILGqADHIKNHG 172
Cdd:PRK08601 121 LSGDLRLMALCWGATLLGLTLLIGLNKGWKVAREAAKISGMLFLISWLALALAIVWLFIATGEWQLTSVLS-NENLAQLG 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 173 LFIPMIFMFLLG--AFTKSAQFPFHIWLPRAMAAPTPVSAYLHsATMVKAGIFLLLRFTPLL--GLSNMYIYIVTFvglI 248
Cdd:PRK08601 200 TWEKTGINLLLIlaVMIPAAQWPFQRWLIESAVAPTPVSAIMH-AGLVNAGGIMLTRFSPLFhdDIAQILLLIFAS---I 275
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 505258908 249 TMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFGALFHLMNHAIFKCALFMGVG 326
Cdd:PRK08601 276 SVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALG-----------------AYSAAIIHLILHGLFKATLFLQSG 336
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
29-434 |
3.49e-16 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 82.45 E-value: 3.49e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 29 YAGYIALVAPVISSIYFLIQI-PSVAKLQyLSTSIPWIKTLDINLDLRLDGLSLTL------------------------ 83
Cdd:PRK02546 38 YALIVGLIDFLITVYAFYTGYdFSNPGLQ-LVESYSWLPQLGLTWSVGADGLSMPLilltgfittlavlaawpvtfkpkl 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 84 FMFSM-------IGIVLSDNTILMYIFWELTSVSSFLLISYWyNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTN 156
Cdd:PRK02546 117 FYFLMlamyggqIAVFAVQDMLLFFLAWELELIPVYLLLAIW-GGKKRQYAATKFILYTAGSSLFILLAALAMAFYGDTP 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 157 NIT-DILGQADHIKNHGLFIpmiFMFLLGAF-TKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTP-LLG 233
Cdd:PRK02546 196 TFDmTALAAKDFGLGFQLLC---YAGLLIAYgVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAgMLP 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 234 LSNMYIYIVTFV-GLITMLFGSITALKQWDLKGILAYSTISQLGMIMamvgIGggyaqhqqdaIASIYVFVLFGALFHLM 312
Cdd:PRK02546 273 DAHAQFAPLLIVlGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL----IG----------IGSFTDLGTSGAMLQMI 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 313 NHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTgqlSQFSLI 392
Cdd:PRK02546 339 SHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATS---DAYTLP 415
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 505258908 393 SMIAIVFVGVIASIFTFTYALYMVKEVFWTKYDSKVFTKKNI 434
Cdd:PRK02546 416 FRVVVVFLAAVGVILTPIYLLSMLREIFFGPENKELVSHEKL 457
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
6-466 |
1.11e-15 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 80.43 E-value: 1.11e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 6 LLIAILVIMAMILLMSKRRALAKYAgYIALVAPVISSIYFLIQIPSVAKLQYLST------------SIPWIKTLDINLD 73
Cdd:CHL00049 21 ILIFGLILLLMIDLTSDQKDIPWLY-FISSTSLVMSITALLFQWREEPMISFSGNfqtnnfneifqfLILLCSTLCIPLS 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 74 ---LRLDGLSLTLFMFSMIGIVL-------SDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALL 143
Cdd:CHL00049 100 veyIECTEMAITEFLLFVLTATLggmflcgANDLITIFVALECLSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILV 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 144 VGFIMLYIMTG----TNNITDILGQADHIKNHGLFIPMIFMFLLGAFtKSAQFPFHIWLPRAM-AAPTPVSAYLhSATMV 218
Cdd:CHL00049 180 YGFSWLYGLSGgeieLQEIVNGLINTQMYNSPGISIALIFITVGIGF-KLSLAPFHQWTPDVYeGSPTPVVAFL-SVTSK 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 219 KAGIFLLLRFTPLL--GLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMImaMVGIgggYAQHQQDAI 296
Cdd:CHL00049 258 VAASALATRIFDIPfyFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYV--IIGI---IVGDSNDGY 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 297 ASIYVFVLFgalFHLMNHAIFKCALFMGVgildhEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMF 376
Cdd:CHL00049 333 ASMITYMLF---YIFMNLGTFACIVLFGL-----RTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYL 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 377 LDALTQTGQLSqfslismiaIVFVGVIASIFTFTYALYMVKEVFWTKYDSKVFTKKNIHEPWLFSLPSL-ILMVLVPVIF 455
Cdd:CHL00049 405 FWCGWQAGLYF---------LVSIGLLTSVISIYYYLKIIKLLMTGRNQEITPYVRNYRRSPLRSNNSIeLSMIVCVIAS 475
|
490
....*....|.
gi 505258908 456 FVPNIFGKGII 466
Cdd:CHL00049 476 TIPGISMNPII 486
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
79-455 |
3.58e-15 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 78.94 E-value: 3.58e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 79 LSLTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNI 158
Cdd:MTH00217 113 LCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDY 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 159 TDILGqadhIKNHGLFIPMIFM-FLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLLRFT-PLLGLS 235
Cdd:MTH00217 193 QALCC----LKIEKELQYFIFLgFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVIL-AGVLLKLGGYGFIRFSwPLLPEA 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 236 NMYI--YIVTfVGLITMLFGSITALKQWDLKGILAYSTISQlgmiMAMVGIGggyaqhqqdaIASIYVFVLFGALFHLMN 313
Cdd:MTH00217 268 SEYFspLIQT-LSLLAIIYGSLTTCRQVDLKRIIAYSSVAH----MGLVTLG----------IFSHTIQGLVAAIFLMLA 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 314 HAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTqtgqlsQFSLIs 393
Cdd:MTH00217 333 HGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAF------EYSYI- 405
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 505258908 394 miaivfVGVIAS---IFTFTYALYMVKEVFWTKYDSKVFTKKNIHEPWLFSLPSLILMVLVPVIF 455
Cdd:MTH00217 406 ------VGVLASlgmVLSAGYSIYLYNRVCFGAPSKYLYFSRDLNRREFYVLLPLVFLIYLMGIF 464
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
81-457 |
3.94e-15 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 78.66 E-value: 3.94e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYW-YNNGDSQFGaIQSFMITVFGGLALLVGFIMLYIMTGTNNIT 159
Cdd:MTH00163 93 ILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWgYQPERLQAG-IYLLFYTLFASLPLLVGIFYLYNNSGSLSFF 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 160 dilgqadHIKNHGLFIPMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLLRFTPLL-GLSN 236
Cdd:MTH00163 172 -------LLNFFGSLNFLWYLSMILAFlVKMPMFFVHLWLPKAhVEAPVSGSMIL-AGVLLKLGGYGLLRVMSFFsKLGL 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 237 MYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMvgigggyaqhqqdaIASIYVFVLFGALFHLMNHAI 316
Cdd:MTH00163 244 KFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGG--------------LMTFSYWGLMGSLLMMIGHGL 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 317 FKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVM-TIAALSMAGVPFLNgFLSkEMFLdaltqTGQLSQFSLISMI 395
Cdd:MTH00163 310 CSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWfLLSSSNMAAPPSLN-LLG-EISL-----INSLISWSKLSMI 382
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 505258908 396 AIVFVgviaSIFTFTYALYMVKEVFWTKYDSKVFTKKNIHEPWLFSLPS----LILMVLVPVIFFV 457
Cdd:MTH00163 383 FLMLL----SFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLhwlpLNLLILKSDLFML 444
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
88-365 |
5.59e-15 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 78.18 E-value: 5.59e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 88 MIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDILgqadh 167
Cdd:MTH00204 125 LIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILL----- 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 168 ikNHGLFIPMIFMFLLGAF----TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLLRFT-PLLGLSNMYIY- 240
Cdd:MTH00204 200 --NIKLPLSIQKWLLVGFFlslaVKIPQIPFHIWLPQAhVEAPVAGSVIL-AGILLKLGGYGFLRFSwPLFPAASEYFAp 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 241 IVTFVGLITMLFGSITALKQWDLKGILAYSTISQlgmiMAMVGIGggyaqhqqdaIASIYVFVLFGALFHLMNHAIFKCA 320
Cdd:MTH00204 277 LIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAH----MGLVPLG----------LFTHTIEGLVAAVFLMLAHGFVSSA 342
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 505258908 321 LFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVP 365
Cdd:MTH00204 343 LFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFP 387
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
83-461 |
9.55e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 76.61 E-value: 9.55e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 83 LFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDI- 161
Cdd:MTH00196 1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYIn 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 162 LGQADHIKNHGLFIPMIFMFLLGA-FTKSAQFPFHIWLPRAM-AAPTPVSAYLhsATMVKAGIF-LLLRFtpllglsNMY 238
Cdd:MTH00196 81 LVLNSGQSFSSVSVPIGYLLIIVAlLFKLSVAPFHMWAPDVYeGAPTKTTALL--AIVPKLGIFsILVSI-------GLN 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 239 IYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGggyaqhqqdAIASIYVFVLFGALFHLMNHAIFK 318
Cdd:MTH00196 152 VNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIG---------SFESIQASLVYLFIYIIMSICVFS 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 319 CALFMGVgildheagSRDIRI-LSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLdaltQTGQLSQFSLISMIAi 397
Cdd:MTH00196 223 IILALNV--------YKNLIIeFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL----LSGVVYQYYLIFLLA- 289
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 505258908 398 VFVGVIASIftftYALYMVKEVFWTKYDSKVFTKKNIH-EPWLFSLPSLILMVLVPVIFFV---PNIF 461
Cdd:MTH00196 290 VFCSVIAGV----YYVRIVKILFFQANSFLLISTKILKkENKINLRKALLIGFSLYLILFTilsPNFF 353
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
83-411 |
2.19e-14 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 76.03 E-value: 2.19e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 83 LFMFSMIGIVL-------SDNTILMYIFWELTSVSSFLLISYWynngDSQFGAIQS----FMITVFGGLALLVGFIMLYI 151
Cdd:MTH00150 56 SFSLLVLLLCLilvlafsVSSLLMFYFFFEASLIPTLLLILGW----GYQPERLQAgmymMLYTVGASLPLLLVILWMSS 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 152 MTGTNNITDIlgqaDHIKNHGLFIPMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTpvsaylhSATMVKAGIFL----- 224
Cdd:MTH00150 132 SYGSSFMLLI----SSLRKLLSSMGLWGLLVFLAFlVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggy 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 225 -LLRFTPLLGLSNMYIYIVTF-VGLITMLFGSITALKQWDLKGILAYSTISQlgmiMAMVGIGggyaqhqqdaIASIYVF 302
Cdd:MTH00150 201 gILRMMMVFSLSSSSFSIFLIsLSLWGGVLTSLICLRQSDVKSLIAYSSVGH----MSLVLAG----------VLSNTSW 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 303 VLFGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNL---VMTIAalSMAGVPFLNgFLSKEMFLDA 379
Cdd:MTH00150 267 GWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLwwfLFCII--NMAAPPSLN-LLSEIMIFPS 343
|
330 340 350
....*....|....*....|....*....|..
gi 505258908 380 LTqtgQLSQFSLISMIAIVFVGVIASIFTFTY 411
Cdd:MTH00150 344 LI---SYSPWFFVPLGLMVFLSGLYSLYLYTS 372
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
42-412 |
4.34e-14 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 75.73 E-value: 4.34e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 42 SIYFLIQIPSVAKLQYLstsIPWIKTLDINLDLRLDGLSLTLFMFSMIGIVlsdNTILMYIFWELTSVSSFLLISYWYNN 121
Cdd:MTH00226 104 SIYFIILTGFIVPCSIL---ISWHSVKYLTKSFLICMLILEFLLYAVFSVL---DIFMFYILFEGVLIPMYLILGIWGSR 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 122 GDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITdILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRA 201
Cdd:MTH00226 178 EEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYL-TLASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKA 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 202 MAAPTPVSAYLHSATMVKAGIFLLLRFT-PL--LGLSNMYIYIVTfVGLITMLFGSITALKQWDLKGILAYSTISQLGMI 278
Cdd:MTH00226 257 HVEAPVAGSVLLAGILLKLGGYGLVRLSwPIlpLGAQNLAPAVIA-MGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLV 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 279 MAmvgigggyaqhqqdAIASIYVFVLFGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAA 358
Cdd:MTH00226 336 SI--------------TLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTS 401
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 505258908 359 LSMAGVPFLNGFLSKEMFLdaltqtgqLSQFSLISMIAI-VFVGVIAS-IFTFTYA 412
Cdd:MTH00226 402 LANVAVPPSGNFIGEYLSI--------LSSFNWNPIIGVfVCSGVILSaVYSFYFA 449
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-426 |
4.62e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 75.20 E-value: 4.62e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 89 IGIVLSDNTILMYIFWELTSVSSFLLISYWyNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDILGQADHI 168
Cdd:PRK06591 129 LGMIATNDFFNLYVFIEISALSSYVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAAYLQEH 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 169 KNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFT-PLLGLSNMYIYIVTFV-- 245
Cdd:PRK06591 208 TNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTyIIIGYETIKTAITNFIrp 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 246 -GLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGyaqhqqdaiasIYVFVLFgalfhLMNHAIFKCALFMG 324
Cdd:PRK06591 288 iALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFLLYVTENG-----------IIILPSL-----LLADSINKIALFLI 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 325 VGILDHEAGSrdirilsgmrqlfpKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLSQFSLIsmiaivfvgVIA 404
Cdd:PRK06591 352 DAYNESYKRE--------------PNKVLIIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIII---------LLS 408
|
330 340
....*....|....*....|..
gi 505258908 405 SIFTFTYALYMVKEVFWTKYDS 426
Cdd:PRK06591 409 SVGSLFYHYKMVLLLFPTKQES 430
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
64-433 |
1.80e-12 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 70.36 E-value: 1.80e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 64 WIKTLDINLDLRLDGLS-----LT-------------------LFMFSM-------IGIVLSDNTILMYIFWELTSVSSF 112
Cdd:CHL00011 70 WINFFDFHWRLGIDGLSigpilLTgfittlatlaawpvtrnsrLFYFLMlamysgqIGLFSSRDLLLFFIMWELELIPVY 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 113 LLISYWynNGDSQ-FGAIQSFMITVFGGLALLVGF--IMLYimtGTNNIT-DILGQADHIKNHGLFIPMIFMFLLGAFTK 188
Cdd:CHL00011 150 LLLSMW--GGKKRlYSATKFILYTAGGSIFLLIGVlgMGLY---GSNEPTlNFETLANQSYPVALEILFYIGFLIAYAVK 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 189 SAQFPFHIWLPramaaPTPVSAYlHSATMVKAGIFL------LLR------------FTPLLGLsnmyiyivtfVGLITM 250
Cdd:CHL00011 225 LPIIPLHTWLP-----DTHGEAH-YSTCMLLAGILLkmgaygLIRinmellphahsiFSPWLVI----------VGAIQI 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 251 LFGSITALKQWDLKGILAYSTISQLGMImaMVGIGggyaqhqqdaiaSIYVFVLFGALFHLMNHAIFKCALFMGVGIldh 330
Cdd:CHL00011 289 IYAASTSLGQRNLKKRIAYSSVSHMGFI--IIGIG------------SITDTGLNGAILQIISHGFIGAALFFLAGT--- 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 331 eagSRD-IRILS-----GMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEM-FLDALTQTgqlsQFSLISMIAIVFVGVI 403
Cdd:CHL00011 352 ---SYDrIRLVYldemgGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIvFFGIITSQ----KYLLMPKILITFVMAI 424
|
410 420 430
....*....|....*....|....*....|
gi 505258908 404 ASIFTFTYALYMVKEVFwtkYDSKVFTKKN 433
Cdd:CHL00011 425 GMILTPIYLLSMLRQMF---YGYKLFNVPN 451
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
79-410 |
2.56e-12 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 69.77 E-value: 2.56e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 79 LSLTLFMFSMIgivLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYImtgTNNI 158
Cdd:MTH00014 97 LILNLILLLTF---SASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFY---TNNS 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 159 TDILgqADHIKNHGLFI-PMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLLRFTPLL--- 232
Cdd:MTH00014 171 LSML--MSSMEPPSIYLmNLWWLITILAFmVKMPLYTVHLWLPKAhVEAPVAGSMIL-AGILLKLGGYGLLRMSSLFmhi 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 233 --GLSNMYIYIVTFVGLITmlfgSITALKQWDLKGILAYSTISQLGMIMAmvgigggyaqhqqdAIASIYVFVLFGALFH 310
Cdd:MTH00014 248 nkSLSAPFSSISLVGAVIT----SLICIRQPDLKSLIAYSSVGHMGLMTA--------------GIMSNTSWGWQGALAM 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 311 LMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLV-MTIAALSMAGVPFLNgfLSKEMFLdaLTQTGQLSQF 389
Cdd:MTH00014 310 MIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWwFLLSAANMAAPPSIN--LLSEIML--LTSILSSSLS 385
|
330 340
....*....|....*....|.
gi 505258908 390 SLISMIAIVFVGVIASIFTFT 410
Cdd:MTH00014 386 TAILLAITSFLAAAYSLFLYT 406
|
|
| PRK12504 |
PRK12504 |
DUF4040 domain-containing protein; |
593-753 |
5.13e-12 |
|
DUF4040 domain-containing protein;
Pssm-ID: 183561 [Multi-domain] Cd Length: 178 Bit Score: 64.98 E-value: 5.13e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 593 ALEIILAIVTVTIGISLIFIRQRLTMVILNGVIGFVVTLFFIAMKAPDLALTQLVVET-ITTILFIVSFSRlpnVPRSNA 671
Cdd:PRK12504 5 IINAALLLFLVATAVATALLRDVLASIVVFAAFSLGMALIYLILDAPDVAITEAAVGAgISTVLLLLTLAL---TGRPDV 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 672 NKKREIIKISVSLLMALIVVSLIFITQQTDGL--------SSISDFYLK-ADKLTGGKNIVNAILGDFRALDTLFEGLVL 742
Cdd:PRK12504 82 DKVFERINVPAVLIALVLFVALLYAVPDLPAFgdpnapahSHVTQYYIEnTYRETGIPNVVTAVLASYRGYDTFGETVVV 161
|
170
....*....|.
gi 505258908 743 IITGLGIYTLL 753
Cdd:PRK12504 162 FTAGVAVLLVL 172
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
66-461 |
6.06e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 68.47 E-value: 6.06e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 66 KTLDINLDLRLDGLSLTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVG 145
Cdd:MTH00205 79 KVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIG 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 146 FIMLYIMTGTNNITDILGQADHIKNHGLFipmIFMFLLGAFTKSAQFPFHIWLPRA-MAAPTpvsaylhSATMVKAGIFL 224
Cdd:MTH00205 159 LFFLNSLNFSLSMFFNFPLNFSDFYLFLY---WIFLMLAFLVKLPMYFVHLWLPKAhVEAPV-------SGSMILAGVLL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 225 ------LLRFTPLLgLSNMYIYIVTF--VGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAmvgigggyaqhqqdAI 296
Cdd:MTH00205 229 klggygLIRITSML-YKLNSNFSELFfsISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVV--------------GV 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 297 ASIYVFVLFGALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLV-MTIAALSMAGVPFLNgfLSKEM 375
Cdd:MTH00205 294 FSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMwFLLISCNMAAPPSLN--LASEI 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 376 FLdaltqTGQLSQFSLISMIAIVFVGVIASIftftYALYMVKEVFWTKYDSKVFTKKNIHEPWLFslpsLILMVLVP--V 453
Cdd:MTH00205 372 LL-----IMSLLSSSKISGIPLSLISFLSGA----YSLYLYSQSQHGKVSSQISSFLAISEREYY----ILILHWFPlnI 438
|
....*...
gi 505258908 454 IFFVPNIF 461
Cdd:MTH00205 439 LILKLKIF 446
|
|
| MbhD |
pfam13244 |
MBH, subunit D; Hydrogen gas-evolving membrane-bound hydrogenase (MBH) is a respiratory ... |
600-664 |
6.22e-12 |
|
MBH, subunit D; Hydrogen gas-evolving membrane-bound hydrogenase (MBH) is a respiratory complex homologous to the quinone-reducing Complex I. Like Complex I, MBH has peripheral and membrane arms. MBH is made of 14 subunits (MbhA-N). MbhJ, K, L, N and M form the Membrane-anchored hydrogenase module. MbhJ, K, L, N are predicted to be exposed to the cytoplasm and form the peripheral arm. The remaining 10 subunits are predicted to be integral membrane proteins forming the membrane arm, made of 44 transmembrane helices (TMH). MbhA, B, C and F form the Sodium translocation module. MbhD, E, G and H form the Proton translocation module. MbhI is the linker between the hydrogenase module and the proton-translocating membrane module. It anchors the discontinuous TMH7 of MbhH via its middle lateral helix and the C-terminal of TMH2, found in MbhE. MbhD and MbhE together are equivalent to Nqo10 of Complex I. MbhD has three TM helices.
Pssm-ID: 463816 [Multi-domain] Cd Length: 67 Bit Score: 61.25 E-value: 6.22e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 505258908 600 IVTVTIGISLIFIRQRLTMVILNGVIGFVVTLFFIAMKAPDLALTQL-VVETITTILFIVSFSRLP 664
Cdd:pfam13244 1 LLLVVAALAAVLARDRLAAVILLGVVGLGVALLFVLLGAPDVALTQAaVGEGLTTVLFLLALRRLP 66
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
1-407 |
2.61e-11 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 66.58 E-value: 2.61e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 1 MSLVYLLIAILVIMAMILLMSKRRALAKYAGYIALVAPVISSIYFLIQIPSVAKLQYLSTSIPWIKTLDINLDLRLdgls 80
Cdd:MTH00199 29 LSIGVLLLIGLIVELNSLNLFQSDKVLDGTNGLLLTNSWIIISKIIIIIGSISILLMGSGETILSEGGQSSPILIL---- 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 ltLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITD 160
Cdd:MTH00199 105 --IVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQG 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 161 I--LGQADHIKnhgLFIPMIFMFLLGAFtksaqfPFHIWLPRAM-AAPTPVSAYLhsATMVKAGIF-LLLRFTPLlglsn 236
Cdd:MTH00199 183 InsILTGDVGK---ILITISLLFKLSAA------PFHMWAPDVYeGAPTITTALL--ATVPKIGVFsILVQIGPV----- 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 237 myIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGgyaqhqqdaIASIYVFVLFGALFHLMNHAI 316
Cdd:MTH00199 247 --TNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGS---------FESIQASLIYMIIYVIMSICS 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 317 FKCALFMGVgildheagSRDIRI-LSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLdaltQTGQLSQFSLISMI 395
Cdd:MTH00199 316 FSIILSLKL--------TKGLIVeVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL----LSGVSSGYYLICII 383
|
410
....*....|..
gi 505258908 396 AiVFVGVIASIF 407
Cdd:MTH00199 384 A-VLSSVIAGVY 394
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
94-410 |
1.16e-10 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 64.61 E-value: 1.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 94 SDNTILMYIFWELTSVSSFLLISYWYNNGDsQFGAIQSFMI-TVFGGLALLVGFIMLYIMTGTNNITDI-LGQADHikNH 171
Cdd:MTH00044 113 SLELILFYIAFETTLIPTLILITRWGAQKE-RIQAGLYFLFyTLFGSLPLLISLIAIYSSSSSLSIPLSeLNWLTS--LS 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 172 GLFIPMIFMFLLGAFT-KSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLLRFTPLLGLSNMYI---YIVTFV- 245
Cdd:MTH00044 190 SNSSSIWWIFCILAFLvKMPIYGFHLWLPKAhVEAPVAGSMIL-AAILLKLGGYGLIRLINLFSLPSANNisfILIVFCc 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 246 --GLITmlfgSITALKQWDLKGILAYSTISQLGMIMAmvgigggyaqhqqdAIASIYVFVLFGALFHLMNHAIFKCALFM 323
Cdd:MTH00044 269 wgALIT----SIICLRQTDLKALIAYSSVGHMSLVAA--------------GIFSGTNWGINGALILMIAHGLVSSALFC 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 324 GVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTqtgqlsQFSLISMIAIVFVGVI 403
Cdd:MTH00044 331 LANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSII------SWSILSFPIIGLATVF 404
|
....*..
gi 505258908 404 ASIFTFT 410
Cdd:MTH00044 405 GAIYSLL 411
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
81-422 |
2.08e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 63.78 E-value: 2.08e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITd 160
Cdd:MTH00068 99 LIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLI- 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 161 iLGQADHIKNHGLFIPMIF--MFLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLLRFTPLLG-LSN 236
Cdd:MTH00068 178 -LLELMSPMQLMTYTNKIWwlACLLAFMVKMPLYGLHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGILRISILLTpLSK 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 237 MYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAqhqqdaiasiyvfvLFGALFHLMNHAI 316
Cdd:MTH00068 256 ELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWS--------------FSGAIILMISHGL 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 317 FKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALS-MAGVPFLNgFLSKEMFLDALTQTgqlsqfsliSMI 395
Cdd:MTH00068 322 TSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSnMALPPSPN-LWGELTIMVSLFNW---------SNW 391
|
330 340
....*....|....*....|....*..
gi 505258908 396 AIVFVGvIASIFTFTYALYMvkevFWT 422
Cdd:MTH00068 392 TILITG-LGTLITAAYTLYM----FLM 413
|
|
| MbhE |
pfam20501 |
MBH, subunit E; Hydrogen gas-evolving membrane-bound hydrogenase (MBH) is a respiratory ... |
678-753 |
3.49e-10 |
|
MBH, subunit E; Hydrogen gas-evolving membrane-bound hydrogenase (MBH) is a respiratory complex homologous to the quinone-reducing Complex I. Like Complex I, MBH has peripheral and membrane arms. MBH is made of 14 subunits (MbhA-N). MbhJ, K, L, N and M form the Membrane-anchored hydrogenase module. MbhJ, K, L, N are predicted to be exposed to the cytoplasm and form the peripheral arm. The remaining 10 subunits are predicted to be integral membrane proteins forming the membrane arm, made of 44 transmembrane helices (TMH). MbhA, B, C and F form the Sodium translocation module. MbhD, E, G and H form the Proton translocation module. MbhI is the linker between the hydrogenase module and the proton-translocating membrane module. It anchors the discontinuous TMH7 of MbhH via its middle lateral helix and the C-terminal of TMH2, found in MbhE. MbhD and MbhE together are equivalent to Nqo10 of Complex I. MbhE has two transmembrane helices: TMH1 and TMH2.
Pssm-ID: 466650 [Multi-domain] Cd Length: 98 Bit Score: 57.30 E-value: 3.49e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 505258908 678 IKISVSLLMALIvvSLIFITQQTDglSSISDFYLK-ADKLTGGKNIVNAILGDFRALDTLFEGLVLIITGLGIYTLL 753
Cdd:pfam20501 9 IAVAAGAGMAAL--SYAVMTRPQT--DSISDFFLErAYPEGGGRNVVNVILVDFRGFDTLGEITVLAIVALTVFALL 81
|
|
| PRK12507 |
PRK12507 |
putative monovalent cation/H+ antiporter subunit B; Reviewed |
594-759 |
2.59e-09 |
|
putative monovalent cation/H+ antiporter subunit B; Reviewed
Pssm-ID: 237121 [Multi-domain] Cd Length: 332 Bit Score: 59.68 E-value: 2.59e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 594 LEIILAIVTVtIGISLIFIRQRLTMVILNGVIGFVVTLFFIAMKAPDLALTQLVVET-ITTILFIVSFSRLPNVprsnan 672
Cdd:PRK12507 12 LNLILFLLIL-ISIKIIFAKDLLNAVMLTSVFSLLIAVSFLIMDAPDVAMTEAAVGAgLSTCVYLNALKLTGRL------ 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 673 KKREIIKISVSLLMALI-VVSLIFITQQTDGLSS--------ISDFYL-KADKLTGGKNIVNAILGDFRALDTLFEGLVL 742
Cdd:PRK12507 85 KNIERTKIIPALLIVLLfGVTLIYMGLDLPNYGDddapvhqhVAKYYIeNTSRDIGIPNFVTAILASYRGYDTLGETSVI 164
|
170
....*....|....*..
gi 505258908 743 IITGLGIYTLLNYQDRR 759
Cdd:PRK12507 165 FIAGIAVLLLLSRKSRR 181
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
79-461 |
6.44e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 58.36 E-value: 6.44e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 79 LSLTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQfGAIQSFMITVFGGLALLVGFIMLYIMTGTNni 158
Cdd:MTH00144 8 LFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESE-SVVKYFIIQSLGSSLLIFGSLIMYNLSFSW-- 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 159 tdilgqadhiknhglfiPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLlrftPLLGLSNMY 238
Cdd:MTH00144 85 -----------------FSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLL----SNFLDLYWL 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 239 IYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGgyaqHQQDAIASIYVFVLFGALFHLMNHaifk 318
Cdd:MTH00144 144 AYLLCVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGS----WLMWMYFLIYIVSSGFLFFSLWSG---- 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 319 calfmgvgildheagsrDIRILSGMRQLFP--KMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQtgqlsqfslISMIA 396
Cdd:MTH00144 216 -----------------DSGSMKDLGSLKPsyKTGLSIISLLLSLGGLPPFLGFCSKLLVLISSME---------SSPLL 269
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 505258908 397 IVFVGVIASIFTFTYALYMVkeVFWTKYDSKVFTKKNihepWLFSLPSLILMVLVPVIFFVPNIF 461
Cdd:MTH00144 270 LILLLLLGSLISLFFYLSVF--FSSFLSSSKSKKSNS----SKVLNSSIISLNLLGGLLFLLLYL 328
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
81-415 |
9.28e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 58.43 E-value: 9.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 81 LTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITd 160
Cdd:MTH00127 100 LTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSML- 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 161 ILGQADHIKNHGLFIPMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLLRFTPLLG-LSNM 237
Cdd:MTH00127 179 TLQYSQPLQLSSWADKLWWAGCLLAFlVKMPLYGVHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRMMVMLDpLTKE 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 238 YIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAqhqqdaiasiyvfvLFGALFHLMNHAIF 317
Cdd:MTH00127 258 LSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWG--------------FTGALILMIAHGLT 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 318 KCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTgqlsqfsliSMIAI 397
Cdd:MTH00127 324 SSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNW---------SPWTL 394
|
330
....*....|....*...
gi 505258908 398 VFVGvIASIFTFTYALYM 415
Cdd:MTH00127 395 ALTG-LGTLITAGYSLYM 411
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
96-280 |
2.52e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 57.13 E-value: 2.52e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 96 NTILMYIFWELTSVSSFLLISYWYNNGDsQFGAIQSFMI-TVFGGLALLVGFIMLYIMTGTNNITDILGQADHIKNHgLF 174
Cdd:MTH00124 114 ELTLFYIMFEATLIPTLILITRWGNQPE-RLSAGTYFLFyTLISSLPLLIAILYLHNQTGTLSLPMLQLTHPTLTNS-WT 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 175 IPMIFMFLLGAF-TKSAQFPFHIWLPRA-MAAPTPVSaylhsatMVKAGIFL------LLRFTPLLG-LSNMYIYIVTFV 245
Cdd:MTH00124 192 NLLLWLACLMAFmVKMPLYGLHLWLPKAhVEAPIAGS-------MVLAAILLklggygIIRITLLLPpLSNTLHYPFLTL 264
|
170 180 190
....*....|....*....|....*....|....*
gi 505258908 246 GLITMLFGSITALKQWDLKGILAYSTISQLGMIMA 280
Cdd:MTH00124 265 ALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIA 299
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
80-416 |
3.94e-08 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 55.94 E-value: 3.94e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 80 SLTLFMFSMIGIVL----SDNTILMYIFWELTSVSSFLLISYWYNNGDSQfGAIQSFMITVFGGLALLVGFIMLYIMTGT 155
Cdd:MTH00011 7 TMFLFSSTMTLGTLmalsSNNWLFLWMGMELNLLSFVPLMTSSKMNQESE-AAVKYFLAQALGSGLLLLGMTMMWSFPSL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 156 nnitdilgqadhiknhgLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLS 235
Cdd:MTH00011 86 -----------------LKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILP 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 236 nmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggyaqhqqdaiasiyVFVLFGALFHLMNHA 315
Cdd:MTH00011 149 -----MMTSMAAMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMTMIS------------------VFSPSMAILYFMTYI 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 316 IFKCALFMGVGILDHEAGSRDIRILSgmrqLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTgqlsqfsliSMI 395
Cdd:MTH00011 206 IITTPLMLLFAYLNAFSTKFNSKISS----MSQTTSMSLFIMLLSLGGLPPFTGFMPKLMAIETLTSN---------SMI 272
|
330 340
....*....|....*....|.
gi 505258908 396 AIVFVGVIASIFTFTYALYMV 416
Cdd:MTH00011 273 LILLVLIVGSLMNLFYYLNLI 293
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
78-456 |
1.24e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 54.59 E-value: 1.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 78 GLSLTLFMFSMIG----IVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQfGAIQSFMITVFGGLALLVGFIMLYIMT 153
Cdd:MTH00200 3 PLILPLFILSLGLgtllTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVE-ATTKYFIIQATASALLLFGGLLNAWTS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 154 GTNNITDILGQAdhiknhglfipMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLG 233
Cdd:MTH00200 82 GQWGISEMLGPL-----------SETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALN 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 234 LSnmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLG-MIMAMVgigggyaqhqqdaiasiyvfvlFGALFHLM 312
Cdd:MTH00200 151 SN-----ILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGwLLSGLV----------------------YSPNLALL 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 313 NHAIFkCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTqtgqlsQFSLI 392
Cdd:MTH00200 204 YLLLY-VIITLTVFLLLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELS------KQGLF 276
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 505258908 393 SMIAIVFVGVIASIFTF---TYALYMVKEVFWTKYDSKVFTKKNIHEPWLFSLPSLILMVLVPVIFF 456
Cdd:MTH00200 277 IYATILLLGSLLSLFFYlrlSYLTLLTLSPNQINMMSSWRTKSNSNLLVGLLLLLSILGLPLTPQLL 343
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
79-373 |
1.38e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 54.74 E-value: 1.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 79 LSLTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSqFGAIQSFMITVFGGLALLVGFimlyimtgtnni 158
Cdd:PRK12664 67 LCYLLYYISSIAAISSSSLTLVVIGFEFMALSALMIIAAGCPGGNI-GAFIHYACVHFFSGVLLLVGA------------ 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 159 tdilgqADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPllGLSnmy 238
Cdd:PRK12664 134 ------SGQAQNGQYTGYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLLLFFS--GEE--- 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 239 iyIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMamvgIGGGYAQHQQDAIASIYVFVLFGALFHLMnhaifk 318
Cdd:PRK12664 203 --ILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLI----IAIGFSGSSGVAIGILILQIVLSVVYQTL------ 270
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 505258908 319 caLFMGVGILDHEAGSRDiriLSGMRQLFpKMNLVM---TIAALSMAGVPFLNGFLSK 373
Cdd:PRK12664 271 --LFMVADSVINRTRKFN---LNRVGGLF-KMSLEAmccIIAILNMGAFPGTAGFVSK 322
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
79-456 |
4.44e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 52.52 E-value: 4.44e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 79 LSLTLFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWYNNGDSQfGAIQSFMITVFGGLALLVGFIMLYIMTGTNNI 158
Cdd:MTH00160 9 LFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSE-SSLKYFLIQALASIILLFSIILNMLNLMLFNN 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 159 TdilgqadhiknhglfipMIFMFLLGAFTKSAQFPFHIWLPRAMAAptpvsaylhsatMVKAGIFLLL---RFTPLLGLS 235
Cdd:MTH00160 88 I-----------------SSMLINSSLLLKLGAAPFHFWFPEVMEG------------LSWINCFILMtwqKIAPLILLS 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 236 -NMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQhqqdAIASIYVFVLFGALFHLMNH 314
Cdd:MTH00160 139 yLINNNFIIIIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWL----IYFLIYSIISLSIILLFNKF 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 315 AIFKcalfmgvgildheagsrdIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTgqlsqfsliSM 394
Cdd:MTH00160 215 NIFF------------------LNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISN---------NM 267
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 505258908 395 IAIVFVGVIASIFTFTYAL-----YMVKEVFWTKYDSKVFTKKNIHEPWLFSLPSLILMVLVPVIFF 456
Cdd:MTH00160 268 FFLLFILIMSSLITLYFYLrisysSLMLNYNKNKWNLKKKKNKFSLILNFLSFISLFGLILSSLLFL 334
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
173-417 |
7.11e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 52.55 E-value: 7.11e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 173 LFIPMIFMFLLGAFtksaqfPFHIWLPRAM-AAPTPVSAYLhsATMVKAGIFLLLrfTPLLGLSNMYIYivtfVGLITML 251
Cdd:MTH00198 303 LFITVAILFKLAAA------PFHMWTPDVYeGAPTPTTALI--AIIPKFTVYILL--TSLVITSKLLLS----VAIISLV 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 252 FGSITALKQWDLKGILAYSTISQLGMIMAMVGIGGGYAQHQQDAIASIYVFVLFGALFHLMNHAIFKCALFMGVGILDHE 331
Cdd:MTH00198 369 VGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRDGSF 448
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 332 AGSRDIRILSGMRQLF---PKMNLVMTIAALSMAGVPFLNGFLSKEMFLDA---LTQTGQLSQFSLISMIAIV------- 398
Cdd:MTH00198 449 GNYNLVRRLVDLTILSrgqPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGsikIAFSSSLSIYYLVALFAIIctcisaf 528
|
250 260
....*....|....*....|.
gi 505258908 399 -FVGVIASI-FTFTYALYMVK 417
Cdd:MTH00198 529 yYIRIVATIyFNFTRPLIKTK 549
|
|
| PRK05640 |
PRK05640 |
putative monovalent cation/H+ antiporter subunit B; Reviewed |
594-753 |
2.02e-06 |
|
putative monovalent cation/H+ antiporter subunit B; Reviewed
Pssm-ID: 101884 Cd Length: 151 Bit Score: 48.28 E-value: 2.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 594 LEIILAIVTVTIGISLIFIRQRLTMVILNGVIGFVVTLFFIAMKAPDLALTQLVVETITTILFIVSFSRLpnvprsnank 673
Cdd:PRK05640 2 LGIILGIIAVTLALIVVLHRDFLASLISYSLASLLFALLAMLFRAPDVALSLIVVGGIVIGLFIFAYEET---------- 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 674 kREIIKISVSLLMALIVVSLIFITQQTDGLSSISDFYLKADKLTggkNIVNAILGDFRALDTLFEGLVLIITGLGIYTLL 753
Cdd:PRK05640 72 -REEIKIDLPLGLAVIPLALALLRTRITVNSLSYEAYLKAWNIG---NLVSEILAGWRLYDSVGEALILFSAALGFSLLV 147
|
|
| COG1563 |
COG1563 |
Uncharacterized MnhB-related membrane protein [General function prediction only]; |
594-662 |
2.59e-06 |
|
Uncharacterized MnhB-related membrane protein [General function prediction only];
Pssm-ID: 441171 [Multi-domain] Cd Length: 81 Bit Score: 45.95 E-value: 2.59e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 594 LEIILAIVTVTIGISLIFIRQRLTMVILNGVIGFVVTLFFIAMKAPDLALTQLVVET-ITTILFIVSFSR 662
Cdd:COG1563 5 IDLILLALLVISAIAAVLQKDLLAAVILFGIFSLLAALLFVLLGAPDVALTEAAVGAgLSTVLFLLALRK 74
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
180-381 |
1.13e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 48.28 E-value: 1.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 180 MFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPllglsNMYIYIVTFVGLITMLFGSITALK 259
Cdd:MTH00112 97 LLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSN-----SLNPTLLLTLAILSTLIGGWGGLN 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 260 QWDLKGILAYSTISQLGMIMAMVGIgggyaqHQQDAIASIYVFVlfgalfhLMNHAIFkcalfmgvgILDHEAGSRDIRI 339
Cdd:MTH00112 172 QTQLRKIMAFSSIAHLGWMIAIITY------SPKLTLLTFYIYI-------LMTTPMF---------LTLNTTSTKTLKD 229
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 505258908 340 LSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALT 381
Cdd:MTH00112 230 MMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQELT 271
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
98-280 |
2.30e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 47.58 E-value: 2.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 98 ILMYIFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITDILGQADHIKNHglfIPM 177
Cdd:MTH00110 116 IMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFLLLQLWAQPLPNS---WSN 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 178 IFMFL--LGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLLRFTPLLG-LSNMYIYIVTFVGLITMLF 252
Cdd:MTH00110 193 NLLWLacMMAFmVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAILLKLGGYGMMRITIILNpLTEFMAYPFLMLSLWGMIM 271
|
170 180
....*....|....*....|....*....
gi 505258908 253 GSITALKQWDLKGILAYSTISQLGM-IMA 280
Cdd:MTH00110 272 TSSICLRQTDLKSLIAYSSVSHMALvIVA 300
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
83-455 |
2.89e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 43.89 E-value: 2.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 83 LFMFSMIGIVL----SDNTILMYIFWELTSVSSFLLISYWYNNGDSqFGAIQSFMITVFGGLALLVGFIMLYImtgtnni 158
Cdd:MTH00197 2 LFLFIIFGGVLfslsSSNWFLVWIGMELNLIGFIPLLSQNKSITEN-EGAMKYFLFQEFGSALLLMGGSLSFS------- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 159 tdilgqadhikNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLsnmy 238
Cdd:MTH00197 74 -----------NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFMG---- 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 239 iyiVTFVGLITMLFGSITALKQWDLKGILAYSTISQLG-MIMAMVgigggyaqhqqdaiASIYVFVLFGALFHLMNHAIF 317
Cdd:MTH00197 139 ---LLICSVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGwMLMSLV--------------YSPSIFMLYYLIYFVIMFMLF 201
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 318 kcaLFMgvgildHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQtgqlSQFSLISMIAI 397
Cdd:MTH00197 202 ---LFL------SKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLS----SNISLITFMLI 268
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 505258908 398 vfvgvIASIFTFTYALYMVKEVFWTKYDSKVFTKKNihePWLFSLPSLILMVLVPVIF 455
Cdd:MTH00197 269 -----LSTCFSLYYYLSLAYKSLILSNWMINFLMKI---NLLYSGLFILLMMMLPLLM 318
|
|
| PRK12567 |
PRK12567 |
putative monovalent cation/H+ antiporter subunit B; Reviewed |
682-759 |
3.78e-04 |
|
putative monovalent cation/H+ antiporter subunit B; Reviewed
Pssm-ID: 237140 [Multi-domain] Cd Length: 218 Bit Score: 42.57 E-value: 3.78e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 505258908 682 VSLLMALIVVSLIFITQQTDGLSSISDFYLKADKLTGGKNIVNAILGDFRALDTLFEGLVLIITGLGIYTLLNYQDRR 759
Cdd:PRK12567 4 VYLLAILLLFIKVLLSPSFALEPGGRDYVESVVEETGVPNAVTGIIVRNRLYDTLGEVTVFFIAALGVGLLLANEKPK 81
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
76-365 |
6.46e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 42.99 E-value: 6.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 76 LDGLSLTLFMFSMIGIVLS---DNTILMYIFWELTSVSSFLLI------SYWYNNGDSQFGAIqsfmitVFGGLALLVGF 146
Cdd:MTH00062 69 LSGVSRFFLFLSLIFSILCfcvNNSLLFWFFYELSIIPLLYLLfsespySERYLASWYFLGYL------LLTSLPLLLCL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 147 IMLYIMTGTNNITDIlgQADHIKNHGLFIPMIFMFllgaFTKSAQFPFHIWLPRAMA-APTPVSAYLhSATMVKAGIFLL 225
Cdd:MTH00062 143 LYLSLVNGSFNFSDW--GSDDSVSLIVYYVLSFMF----ITKVPLFPFHTWLPIVHAeASSPVSIFL-SGYIMKLGLLGV 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 226 LRFTPllGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQlgMIMAMVGIgggyaqhqqdaIASIYVFVLF 305
Cdd:MTH00062 216 YRFCG--FIFSGSFLGYLFLCCLFSVFFLITACSELDGKRWLAFLSLSH--ILVPVLGL-----------FVGDWSSINL 280
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 306 gALFHLMNHAIFKCALFMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVP 365
Cdd:MTH00062 281 -SFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFP 339
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
83-461 |
6.79e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 42.59 E-value: 6.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 83 LFMFSMIGIVLSDNTILMYIFWELTSVSSFLLISYWynngDSQFGAIQSFMITVFggLALLVGFIMLYIMTGTNNITDiL 162
Cdd:MTH00094 70 LLILICLLFFVSSNMLMLYMFFELSMFPILIMILGY----GSQIEKINSSYYLLF--YAAFFSFPFLFVYLKNFFFFS-L 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 163 GQADHIKNHGLFIPMIFMFLlgafTKSAQFPFHIWLPRA-MAAPTPVSAYLHSAtMVKAGIFLLLRFTPLLGLSNMYIYI 241
Cdd:MTH00094 143 CYFDFFLSWEMFFILSLSFM----MKFPVYFLHLWLPKAhVEAPTTASMLLAGL-LLKLGTAGFLRILGSLNFVYNNFWI 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 242 vtFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAmvgigggyaqhqqdAIASIYVFVLFGALFHLMNHAIFKCAL 321
Cdd:MTH00094 218 --IFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLL--------------SLVYMSMSGKLSGLMMMLAHGYTSTLM 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 322 FMGVGILDHEAGSRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFldaltqtgqLSQFSLISMIAIVFVG 401
Cdd:MTH00094 282 FYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLI---------ISNSFMKNKFSFFFIF 352
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 402 VIAsIFTFTYALYMVKEVFWTKYDSKVFtkknihepwlfslpSLILMVLVPVIFFVPNIF 461
Cdd:MTH00094 353 FYF-LVSFYYSLFLIVSSFMGKKFSNFN--------------NFNVGLSLPLVFMMFNMF 397
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
179-384 |
2.72e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 40.68 E-value: 2.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 179 FMFLLGAFTKSAQFPFHIWLPRAMAApTPVSAYLHSATMVKAGIFLLLrftpLLGLSNMYIYIVTFVGLITMLFGSITAL 258
Cdd:MTH00041 96 IIITLALALKLGLAPCHFWFPDVLQG-LPFLQGLIIATWQKIAPLILL----ISISNLLNSNILILCGILSVLVGGWGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 259 KQWDLKGILAYSTISQLGMIMAMVGigggYAQHQQDAIASIYVfvlfgalfhLMNHAIFkcalfmgvgILDHEAGSRDIR 338
Cdd:MTH00041 171 NQTQTRKILAFSSIAHLGWIIITSA----YSPNASIIMFLIYI---------IINTSIF---------LIGNNFSLSTLS 228
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 505258908 339 ILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTG 384
Cdd:MTH00041 229 HLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLYCLIQNN 274
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
193-396 |
4.47e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 39.90 E-value: 4.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 193 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLLRFTPLLGLsnmyiYIVTFVGLITMLFGSITALKQWDLKGILAYSTI 272
Cdd:MTH00070 110 PFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNS-----NLLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSI 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505258908 273 SQLG-MIMAMvgigggyaqhqqdaiasiyVFVLFGALFHLMNHAIFKCALFMGVGILDheagSRDIRILSGMRQLFPKMN 351
Cdd:MTH00070 185 AHLGwMIIIL-------------------TFSPHLTLLNLLIYLIMTSSMFLMLMNLN----STNINKLSSSWSKNPTLT 241
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 505258908 352 LVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLSQFSLISMIA 396
Cdd:MTH00070 242 SMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSA 286
|
|
| |
