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Conserved domains on  [gi|505383691|ref|WP_015570793|]
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MULTISPECIES: YoaK family small membrane protein [Gammaproteobacteria]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YoaK NF033821
YoaK family small membrane protein; YoaK is a small protein (about 32 amino acids) found in E. ...
 1-32 4.49e-06

YoaK family small membrane protein; YoaK is a small protein (about 32 amino acids) found in E. coli (from which it is named), Salmonella, Klebsiella, Pantoea, and related taxa. It associates with the inner membrane.


:

Pssm-ID: 411394  Cd Length: 32  Bit Score: 37.37  E-value: 4.49e-06
                        10        20        30
                ....*....|....*....|....*....|..
gi 505383691  1 MRIGILFPVVIFITAVVFLGWFFLGGYAAPGA 32
Cdd:NF033821  1 MKIGILFPVAIIIAAVVFLAWFIIGGYAAPGG 32
 
Name Accession Description Interval E-value
YoaK NF033821
YoaK family small membrane protein; YoaK is a small protein (about 32 amino acids) found in E. ...
 1-32 4.49e-06

YoaK family small membrane protein; YoaK is a small protein (about 32 amino acids) found in E. coli (from which it is named), Salmonella, Klebsiella, Pantoea, and related taxa. It associates with the inner membrane.


Pssm-ID: 411394  Cd Length: 32  Bit Score: 37.37  E-value: 4.49e-06
                        10        20        30
                ....*....|....*....|....*....|..
gi 505383691  1 MRIGILFPVVIFITAVVFLGWFFLGGYAAPGA 32
Cdd:NF033821  1 MKIGILFPVAIIIAAVVFLAWFIIGGYAAPGG 32
ZntA COG2217
Cation-transporting P-type ATPase [Inorganic ion transport and metabolism];
4-26 8.86e-03

Cation-transporting P-type ATPase [Inorganic ion transport and metabolism];


Pssm-ID: 441819 [Multi-domain]  Cd Length: 717  Bit Score: 30.50  E-value: 8.86e-03
                         10        20
                 ....*....|....*....|...
gi 505383691   4 GILFPVVIFITAVVFLGWFFLGG 26
Cdd:COG2217  328 RYFVPAVLAIAALTFLVWLLFGG 350
 
Name Accession Description Interval E-value
YoaK NF033821
YoaK family small membrane protein; YoaK is a small protein (about 32 amino acids) found in E. ...
 1-32 4.49e-06

YoaK family small membrane protein; YoaK is a small protein (about 32 amino acids) found in E. coli (from which it is named), Salmonella, Klebsiella, Pantoea, and related taxa. It associates with the inner membrane.


Pssm-ID: 411394  Cd Length: 32  Bit Score: 37.37  E-value: 4.49e-06
                        10        20        30
                ....*....|....*....|....*....|..
gi 505383691  1 MRIGILFPVVIFITAVVFLGWFFLGGYAAPGA 32
Cdd:NF033821  1 MKIGILFPVAIIIAAVVFLAWFIIGGYAAPGG 32
ZntA COG2217
Cation-transporting P-type ATPase [Inorganic ion transport and metabolism];
4-26 8.86e-03

Cation-transporting P-type ATPase [Inorganic ion transport and metabolism];


Pssm-ID: 441819 [Multi-domain]  Cd Length: 717  Bit Score: 30.50  E-value: 8.86e-03
                         10        20
                 ....*....|....*....|...
gi 505383691   4 GILFPVVIFITAVVFLGWFFLGG 26
Cdd:COG2217  328 RYFVPAVLAIAALTFLVWLLFGG 350
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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