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Conserved domains on  [gi|505445331|ref|WP_015632433|]
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MULTISPECIES: DUF6750 family protein [Enterobacterales]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF6750 super family cl48688
Family of unknown function (DUF6750); This family of proteins is functionally uncharacterized. ...
 6-130 1.62e-16

Family of unknown function (DUF6750); This family of proteins is functionally uncharacterized. This family of proteins is found in proteobacteria. Proteins in this family are approximately 130 amino acids in length.


The actual alignment was detected with superfamily member pfam20535:

Pssm-ID: 466684  Cd Length: 129  Bit Score: 70.49  E-value: 1.62e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505445331    6 DRVLKASIAAHELRHSMKRKFTAGMASLVA-LTPLSALADGSLTDMVDEGATGMSDVEKDALVFAEGLGVLIVFASI-IA 83
Cdd:pfam20535   3 ARLLAVKVHLSLAAMSLRQKLAAGLLALLAlVLPLPASADGDIAGMVNSVAQGAKSVQSSLLTIAQFIGIGCVLAGLfLW 82

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 505445331   84 MKNKAKSPHITTGGIITGWVVGIFLIGLAEIVRRSQSQVGMTEVTVG 130
Cdd:pfam20535  83 LKKKGDRPQVKTGRIVTSIGIGCLLIAIPEFISRGQKQAGLSPVDIG 129
 
Name Accession Description Interval E-value
DUF6750 pfam20535
Family of unknown function (DUF6750); This family of proteins is functionally uncharacterized. ...
 6-130 1.62e-16

Family of unknown function (DUF6750); This family of proteins is functionally uncharacterized. This family of proteins is found in proteobacteria. Proteins in this family are approximately 130 amino acids in length.


Pssm-ID: 466684  Cd Length: 129  Bit Score: 70.49  E-value: 1.62e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505445331    6 DRVLKASIAAHELRHSMKRKFTAGMASLVA-LTPLSALADGSLTDMVDEGATGMSDVEKDALVFAEGLGVLIVFASI-IA 83
Cdd:pfam20535   3 ARLLAVKVHLSLAAMSLRQKLAAGLLALLAlVLPLPASADGDIAGMVNSVAQGAKSVQSSLLTIAQFIGIGCVLAGLfLW 82

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 505445331   84 MKNKAKSPHITTGGIITGWVVGIFLIGLAEIVRRSQSQVGMTEVTVG 130
Cdd:pfam20535  83 LKKKGDRPQVKTGRIVTSIGIGCLLIAIPEFISRGQKQAGLSPVDIG 129
 
Name Accession Description Interval E-value
DUF6750 pfam20535
Family of unknown function (DUF6750); This family of proteins is functionally uncharacterized. ...
 6-130 1.62e-16

Family of unknown function (DUF6750); This family of proteins is functionally uncharacterized. This family of proteins is found in proteobacteria. Proteins in this family are approximately 130 amino acids in length.


Pssm-ID: 466684  Cd Length: 129  Bit Score: 70.49  E-value: 1.62e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 505445331    6 DRVLKASIAAHELRHSMKRKFTAGMASLVA-LTPLSALADGSLTDMVDEGATGMSDVEKDALVFAEGLGVLIVFASI-IA 83
Cdd:pfam20535   3 ARLLAVKVHLSLAAMSLRQKLAAGLLALLAlVLPLPASADGDIAGMVNSVAQGAKSVQSSLLTIAQFIGIGCVLAGLfLW 82

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 505445331   84 MKNKAKSPHITTGGIITGWVVGIFLIGLAEIVRRSQSQVGMTEVTVG 130
Cdd:pfam20535  83 LKKKGDRPQVKTGRIVTSIGIGCLLIAIPEFISRGQKQAGLSPVDIG 129
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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