|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10503 |
PRK10503 |
MdtB/MuxB family multidrug efflux RND transporter permease subunit; |
1-1040 |
0e+00 |
|
MdtB/MuxB family multidrug efflux RND transporter permease subunit;
Pssm-ID: 182501 [Multi-domain] Cd Length: 1040 Bit Score: 1961.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 1 MQVSAQIPGGGPSRQFILRPVATTLFMVAILLAGIIGYRMLPVSALPAVDYPTIQVVTFYPGASPDVMTSAVTAPLERQL 80
Cdd:PRK10503 1 MQVLPPSSTGGPSRLFILRPVATTLLMVAILLAGIIGYRALPVSALPEVDYPTIQVVTLYPGASPDVMTSAVTAPLERQF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 81 GQMSGLKQMASQSSGGASVITLQFQLTLPLDVAEQEVQAAINAASNLLPNDLPYPPIYNKVNPADPPILTLAVTSDAMPM 160
Cdd:PRK10503 81 GQMSGLKQMSSQSSGGASVITLQFQLTLPLDVAEQEVQAAINAATNLLPSDLPNPPVYSKVNPADPPIMTLAVTSTAMPM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 161 TQIQDMVETRVAQKISQVNGVGLVTLAGGQRPAVRVKLNAQAVAAQGLDSETIRTAINSANVNSAKGSLDGPTRSVTLSA 240
Cdd:PRK10503 161 TQVEDMVETRVAQKISQVSGVGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAITGANVNSAKGSLDGPTRAVTLSA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 241 NDQMKSVDDYRKLIIAYKNGAPVRLQDVATIEQGAENSKLGAWANGKQAIVINVQRQPGVNVIETTDNIRQMLPELISSL 320
Cdd:PRK10503 241 NDQMQSAEEYRQLIIAYQNGAPIRLGDVATVEQGAENSWLGAWANKQQAIVMNVQRQPGANIIATADSIRQMLPQLTESL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 321 PKSVDIKILTDRTTTIRASVKDVQFELLLAVVLVVMVIYLFLRSGIATLIPSIAVPLSLVGTFAIMYFCGFSINNLTLMA 400
Cdd:PRK10503 321 PKSVKVTVLSDRTTNIRASVDDTQFELMLAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTFAVMVFLDFSINNLTLMA 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 401 LTIATGFVVDDAIVVIENISRYIEQGEKPMAAALKGAGEIGFTIISLTFSLIAVLIPLFFMGDIVGRLFREFAITLAIAI 480
Cdd:PRK10503 401 LTIATGFVVDDAIVVIENISRYIEKGEKPLAAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAVTLAVAI 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 481 LISAVVSLTLTPMMCARMLKSESQVKHNRFEQASEHFFKRIIAGYTVWLKKALNHPLITLGIALSTLALTALLYIIIPKG 560
Cdd:PRK10503 481 LISAVVSLTLTPMMCARMLSQESLRKQNRFSRASERMFDRVIAAYGRGLAKVLNHPWLTLSVALSTLLLTVLLWIFIPKG 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 561 FFPLQDNGLIQGTLEAPQSISFSAMADKQRQVSSLLLQDPAVENVTTFVGVDGSNPTLNNGRLQITLKPINQRNDRIAEI 640
Cdd:PRK10503 561 FFPVQDNGIIQGTLQAPQSSSFANMAQRQRQVADVILQDPAVQSLTSFVGVDGTNPSLNSARLQINLKPLDERDDRVQKV 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 641 IPRLQGKMASIPDVKLYLQPMQDLTIDTQVTRNQYQFTLQATSLDELSIWVPKLLAELKQRSELVDISSDWQARGLIAYI 720
Cdd:PRK10503 641 IARLQTAVAKVPGVDLYLQPTQDLTIDTQVSRTQYQFTLQATSLDALSTWVPKLMEKLQQLPQLSDVSSDWQDKGLVAYV 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 721 KVDRDIASRLGISMAAIDNALYNAFGQRLISTIYTQANQYRVVLEHDMKSTPGLAAFDNIRLNGTDGNIVPLSTIATVEQ 800
Cdd:PRK10503 721 NVDRDSASRLGISMADVDNALYNAFGQRLISTIYTQANQYRVVLEHNTENTPGLAALDTIRLTSSDGGVVPLSSIATIEQ 800
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 801 RFGPLAINHLAQFPATTFSFNVSGNASLEQSVNAVRNAAQLIEMPKDMTIKFQGTTLAFESALGNTLWLIAAAVTAMYIV 880
Cdd:PRK10503 801 RFGPLSINHLDQFPSTTISFNVPDGYSLGDAVQAIMDTEKTLNLPADITTQFQGSTLAFQSALGSTVWLIVAAVVAMYIV 880
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 881 LGILYESFIHPVTILSTLPTAGVGALLALMMTGQELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGLPPYEAIYQA 960
Cdd:PRK10503 881 LGVLYESFIHPITILSTLPTAGVGALLALMIAGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMSPRDAIYQA 960
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 961 CLLRFRPILMTTMAALFGALPLMLSAGVGAELRRPLGICMVGGLIMSQILTLFTTPVVYLLFDKLARYRRNRKPGELDNS 1040
Cdd:PRK10503 961 CLLRFRPILMTTLAALLGALPLMLSTGVGAELRRPLGICMVGGLIVSQVLTLFTTPVIYLLFDRLALYTKSRFPRHEEEA 1040
|
|
| RND_permease_2 |
NF033617 |
multidrug efflux RND transporter permease subunit; |
13-1024 |
0e+00 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 411236 [Multi-domain] Cd Length: 1009 Bit Score: 1308.08 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 13 SRQFILRPVATTLFMVAILLAGIIGYRMLPVSALPAVDYPTIQVVTFYPGASPDVMTSAVTAPLERQLGQMSGLKQMASQ 92
Cdd:NF033617 1 SDVFIKRPVATLLLSLLILLLGLLAFRKLPVREYPEVDFPTITVSTSYPGASPELMQSSITQPLEQQLAQIEGIDEMTSQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 93 SSGGASVITLQFQLTLPLDVAEQEVQAAINAASNLLPNDLPYPPIYNKVNPADPPILTLAVTSDAMPMTQIQDMVETRVA 172
Cdd:NF033617 81 SSLGYSTITLQFRLGTDLDVALSEVQAAINAAQSLLPSEAPDPPVYRKANSADTPIMYIGLTSEEMPRGQLTDYAERVLA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 173 QKISQVNGVGLVTLAGGQRPAVRVKLNAQAVAAQGLDSETIRTAINSANVNSAKGSLDGPTRSVTLSANDQMKSVDDYRK 252
Cdd:NF033617 161 PKLSQINGVGSVDVSGGQRPAMRVWLDPEKMAARGLTADDVRSALNSNNVNSPKGAVRGDSVVSTVRANDQLKTAEDYED 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 253 LIIAYK-NGAPVRLQDVATIEQGAENSKLGAWANGKQAIVINVQRQPGVNVIETTDNIRQMLPELISSLPKSVDIKILTD 331
Cdd:NF033617 241 LVIKYAdNGAPVRLGDVATVELGAENVRNRAWANGVPAVVLGINRQPGANPIEVADEIRALLPELQETLPKNIKVNVLYD 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 332 RTTTIRASVKDVQFELLLAVVLVVMVIYLFLRSGIATLIPSIAVPLSLVGTFAIMYFCGFSINNLTLMALTIATGFVVDD 411
Cdd:NF033617 321 RTRFIRASIDEVESTLLEAVALVILVVFLFLRNLRATLIPAVTVPLSLIGTFAVMYLFGFSINLLTLMALVLAIGLVVDD 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 412 AIVVIENISRYIEQGEKPMAAALKGAGEIGFTIISLTFSLIAVLIPLFFMGDIVGRLFREFAITLAIAILISAVVSLTLT 491
Cdd:NF033617 401 AIVVVENIHRHIEEGESPLEAALKGAREIGFTVIAMTLTLVAVYLPILFMGGLTGRLFREFAVTLAGAVIISGIVALTLT 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 492 PMMCARMLKSEsqVKHNRFEQASEHFFKRIIAGYTVWLKKALNHPLITLGIALSTLALTALLYIIIPKGFFPLQDNGLIQ 571
Cdd:NF033617 481 PMMCSRLLKAN--EKPGRFARAVDRFFDGLTARYGRGLKWVLKHRPLTLVVALATLALLPLLYVFIPKELAPSEDRGVIF 558
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 572 GTLEAPQSISFSAMADKQRQVSSLLLQDPAVENVTTFVGVdGSNPTLNNGRLQITLKPINQRNDRIAEIIPRLQGKMASI 651
Cdd:NF033617 559 GMIQAPQSISLDYMSAKMRDVEKILSSDPEVQSLTSFNGV-GGNPGDNTGFGIINLKPWDERDVSAQEIIDRLRPKLAKV 637
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 652 PDVKLYLQPMQDLTIDTQVTRNQYQFTLQATSLDELSIWVPKLLAELKQRSELVDISSDWQARGLIAYIKVDRDIASRLG 731
Cdd:NF033617 638 PGMDLFLFPLQDLPGGAGSSLPQYQVTLTPSDYDSLFTWAEKLKEKLRKSPQFADVDSDLQDKGPELNVDIDRDKAARLG 717
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 732 ISMAAIDNALYNAFGQRLISTIYTQANQYRVVLEHDMKSTPGLAAFDNIRLNGTDGNIVPLSTIATVEQRFGPLAINHLA 811
Cdd:NF033617 718 ISMQDIGSTLEVAFGQRQVNTIYTDGNQYKVVLEVDRRYRLNPEALNQIYVRSNDGKLVPLSTLAKIEERAAPLSLNHFN 797
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 812 QFPATTFSFNVSGNASLEQSVNAVRNAAQLIeMPKDMTIKFQGTTLAFESALGNTLWLIAAAVTAMYIVLGILYESFIHP 891
Cdd:NF033617 798 QFNSATLSFNLAPGVSLGEAIEALDQAAKEL-LPSGISGSFQGAARAFQEEGSSLLFLFLLALAAIYLVLAIQYESFVDP 876
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 892 VTILSTLPTAGVGALLALMMTGQELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGLPPYEAIYQACLLRFRPILMT 971
Cdd:NF033617 877 LTILSTVPLAGCGALLALALGGQSMNIYAQIGLITLIGLVKKNGILMVEFANELQRHQGLSRREAIYQAAALRLRPILMT 956
|
970 980 990 1000 1010
....*....|....*....|....*....|....*....|....*....|...
gi 506314133 972 TMAALFGALPLMLSAGVGAELRRPLGICMVGGLIMSQILTLFTTPVVYLLFDK 1024
Cdd:NF033617 957 TLAMLLGAIPLMLSTGAGAESRFPLGIVIVGGLGVGTLFTLFVLPVVYLLLAR 1009
|
|
| AcrB |
COG0841 |
Multidrug efflux pump subunit AcrB [Defense mechanisms]; |
13-1029 |
0e+00 |
|
Multidrug efflux pump subunit AcrB [Defense mechanisms];
Pssm-ID: 440603 [Multi-domain] Cd Length: 1015 Bit Score: 1107.48 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 13 SRQFILRPVATTLFMVAILLAGIIGYRMLPVSALPAVDYPTIQVVTFYPGASPDVMTSAVTAPLERQLGQMSGLKQMASQ 92
Cdd:COG0841 4 SRFFIRRPVAAIVLSLLILLAGLLAYLRLPVEQFPDIDPPTVTVSTTYPGASPEEVESTVTTPIEEALNGVEGIKYITST 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 93 SSGGASVITLQFQLTLPLDVAEQEVQAAINAASNLLPNDLpYPPIYNKVNPADPPILTLAVTSDAMPMTQIQDMVETRVA 172
Cdd:COG0841 84 SSEGSSSITVEFELGTDIDEALVDVQNAVDRARSDLPEDV-EPPGVTKVNPSDFPVMVLALSSDDLDELELSDYAERNIK 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 173 QKISQVNGVGLVTLAGGQRPAVRVKLNAQAVAAQGLDSETIRTAINSANVNSAKGSLDGPTRSVTLSANDQMKSVDDYRK 252
Cdd:COG0841 163 DRLERVPGVGQVQIFGGREREIRIWLDPDKLAAYGLTLADVANAIRAQNVDVPAGRIGGGDREYTVRTNGRLKTPEEFEN 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 253 LIIAYKNGAPVRLQDVATIEQGAENSKLGAWANGKQAIVINVQRQPGVNVIETTDNIRQMLPELISSLPKSVDIKILTDR 332
Cdd:COG0841 243 IVIRTNDGSVVRLGDVARVEDGAEDYRSIARLNGKPAVGLAIQKQPGANALEVADAVRAKLEELQASLPEGVELTIVYDQ 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 333 TTTIRASVKDVQFELLLAVVLVVMVIYLFLRSGIATLIPSIAVPLSLVGTFAIMYFCGFSINNLTLMALTIATGFVVDDA 412
Cdd:COG0841 323 SEFIRASIEEVVKTLLEAILLVVLVVFLFLRSWRATLIPAVAIPVSLIGTFAVMYLLGFSLNILTLFALVLAIGIVVDDA 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 413 IVVIENISRYIEQGEKPMAAALKGAGEIGFTIISLTFSLIAVLIPLFFMGDIVGRLFREFAITLAIAILISAVVSLTLTP 492
Cdd:COG0841 403 IVVVENIERHMEEGLSPLEAAIKGAREVAGAVIASTLTLVAVFLPLAFMGGITGQLFRQFALTVAIALLISLFVALTLTP 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 493 MMCARMLKSESQVKHNRFEQASEHFFKRIIAGYTVWLKKALNHPLITLGIALSTLALTALLYIIIPKGFFPLQDNGLIQG 572
Cdd:COG0841 483 ALCARLLKPHPKGKKGRFFRAFNRGFDRLTRGYGRLLRWALRHRKLTLLVALALLALSVLLFGRLPTEFFPEEDQGQIIV 562
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 573 TLEAPQSISFSAMADKQRQVSSLLLQDPAVENVTTFVGVDGSNPTLNNGRLQITLKPINQRNDRIAEIIPRLQGKMASIP 652
Cdd:COG0841 563 SVQLPPGTSLERTEAVVRQVEEILLEVPEVESVFSVVGFSGGGSGSNSGTIFVTLKPWDERDRSADEIIARLREKLAKIP 642
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 653 DVKLYLQPMQDltiDTQVTRNQYQFTLQATSLDELSIWVPKLLAELKQRSELVDISSDWQARGLIAYIKVDRDIASRLGI 732
Cdd:COG0841 643 GARVFVFQPPA---GGLGSGAPIEVQLQGDDLEELAAAAEKLLAALRQIPGLVDVRSDLQLGKPELQLDIDREKAAALGV 719
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 733 SMAAIDNALYNAFGQRLISTIYTQANQYRVVLEHDMKSTPGLAAFDNIRLNGTDGNIVPLSTIATVEQRFGPLAINHLAQ 812
Cdd:COG0841 720 TVADVASTLRAALGGRYVNDFNRGGREYDVRVQAPEEDRNSPEDLENLYVRTPDGEMVPLSSVATIEEGTGPSSINRYNG 799
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 813 FPATTFSFNVSGNASLEQSVNAVRNAAQLIEMPKDMTIKFQGTTLAFESALGNTLWLIAAAVTAMYIVLGILYESFIHPV 892
Cdd:COG0841 800 QRSVTVSANLAPGVSLGEALAAIEELAAELKLPPGVSIEFTGQAEEEQESFSSLGLAFLLALLLVYLVLAAQFESFIQPL 879
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 893 TILSTLPTAGVGALLALMMTGQELDVIAIIGIILLIGIVKKNAIMMIDFALaAEREQGLPPYEAIYQACLLRFRPILMTT 972
Cdd:COG0841 880 IILLTVPLALIGALLGLLLTGTPLNIYSQIGLIMLIGIVVKNAILLVDFAN-QLREEGMSLREAILEAARLRLRPILMTS 958
|
970 980 990 1000 1010
....*....|....*....|....*....|....*....|....*....|....*..
gi 506314133 973 MAALFGALPLMLSAGVGAELRRPLGICMVGGLIMSQILTLFTTPVVYLLFDKLARYR 1029
Cdd:COG0841 959 LATILGLLPLALGTGAGAEFRQPLGIAVIGGLLFSTLLTLFVVPVLYVLLDRLRRRL 1015
|
|
| ACR_tran |
pfam00873 |
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are ... |
12-1023 |
0e+00 |
|
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are involved in drug resistance. AcrB cooperates with a membrane fusion protein, AcrA, and an outer membrane channel TolC. The structure shows the AcrB forms a homotrimer.
Pssm-ID: 395701 [Multi-domain] Cd Length: 1021 Bit Score: 1072.31 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 12 PSRQFILRPVATTLFMVAILLAGIIGYRMLPVSALPAVDYPTIQVVTFYPGASPDVMTSAVTAPLERQLGQMSGLKQMAS 91
Cdd:pfam00873 1 MSKFFIRRPIFTLVLAIAILLAGILSFFSLPVDAFPEIAPPTVQVSTSYPGASPEEVEDTVTQPIEQAMNGLDGLKYMSS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 92 QSSGGASVITLQFQLTLPLDVAEQEVQAAINAASNLLPNDLpYPPIYNKVNPADPPILTLAVTSD--AMPMTQIQDMVET 169
Cdd:pfam00873 81 QSSYGLSSITLTFELGTDIDIARQDVQNRLQLATPLLPEGV-QRPGISVIKTSLGPIMVLAVTSPdgSYTQTDLRDYADT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 170 RVAQKISQVNGVGLVTLAGGQRPAVRVKLNAQAVAAQGLDSETIRTAINSANVNSAKGSLDGPTRSVTLSANDQMKSVDD 249
Cdd:pfam00873 160 NIKPQLSRVPGVGDVQLFGGSEYAMRIWLDPQKLARYGLTLTDVVSALKEQNVNIGAGQLEGQGLQALIRAQGQLQSAED 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 250 YRKLIIAYKNGAPVRLQDVATIEQGAENSKLGAWANGKQAIVINVQRQPGVNVIETTDNIRQMLPELISSLPKSVDIKIL 329
Cdd:pfam00873 240 FEKIIVKNQDGSPVRLRDVATVELGSELYRGFATFNGKPAVGLGVQKLPGANAIETADAVRAKLAELKPTFPQGVEIVVV 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 330 TDRTTTIRASVKDVQFELLLAVVLVVMVIYLFLRSGIATLIPSIAVPLSLVGTFAIMYFCGFSINNLTLMALTIATGFVV 409
Cdd:pfam00873 320 YDTTPFIRASIEEVVKTLLEAIVLVILVMFLFLQNWRATLIPAIAIPLSLLGTFAVMKAFGFSINTLTLGGLVLAIGLVV 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 410 DDAIVVIENISRYI-EQGEKPMAAALKGAGEIGFTIISLTFSLIAVLIPLFFMGDIVGRLFREFAITLAIAILISAVVSL 488
Cdd:pfam00873 400 DDAIVVVENIERVLeENGLKPLEAAYKSMGEIGGALVAIALVLSAVFLPILFLGGLTGRIFRQFAITIVLAILLSVLVAL 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 489 TLTPMMCARMLKSESQVKHNRFEQASEHFFKRIIAGYTVWLKKALNHPLITLGIALSTLALTALLYIIIPKGFFPLQDNG 568
Cdd:pfam00873 480 TLTPALCATLLKPRREPKHGGFFRWFNRMFDRLTRGYAKLLAKVLRHTAVVLLVALLLVVGSVWLFVRIPTEFLPEEDEG 559
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 569 LIQGTLEAPQSISFSAMADKQRQVSSLLLQDPAVENVTTFVGV--DGSNPTLNNGRLQITLKPINQR---NDRIAEIIPR 643
Cdd:pfam00873 560 VFVTSAQLPPGVSLDQTQRVMKQVEKILKEKPEVESVFAVTGFafSGDNNGPNSGDAFISLKPWKERpgpEKSVQALIER 639
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 644 LQGKMASIPDVKLYLQPMQDLTIDTQVT--RNQYQFTLQATSLDELSIWVPKLLAELKQRSELVDISSDWQARGLIAYIK 721
Cdd:pfam00873 640 LRKALKQIPGANVFLFQPIQLRGLGTISgfRSDLQVKIFGDDLDALDEARNQILAALAQLPGLSDVRSDGQEDQPQLQVN 719
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 722 VDRDIASRLGISMAAIDNALYNAFGQRLISTIYTQANQYRVVLEHDMKSTPGLAAFDNIRLNGTDGNIVPLSTIATVEQR 801
Cdd:pfam00873 720 IDREKAARLGVSIQDINDTLSTALGGSYVNDFPEGGRVYDVVVQLPEDFRSSPEDIGQLYVRNPYGKMIPLSAFAKIEWG 799
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 802 FGPLAINHLAQFPATTFSFNVSGNASLEQSVNAVRNAAQLIEMPKDMTIKFQGTTLAFESALGNTLWLIAAAVTAMYIVL 881
Cdd:pfam00873 800 YGPPSINRYNGFRSIVISGNVAAGDSLGDAMEAMAQIAKQVKLPPGYGYTWTGQFEQEQLAGNSLPILIALALLVVFLVL 879
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 882 GILYESFIHPVTILSTLPTAGVGALLALMMTGQELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGLPPYEAIYQAC 961
Cdd:pfam00873 880 AALYESWSDPLSIMLTVPLALVGALLALWLRGLPNSVYAQVGLILLIGLAVKNAILMVEFANELREQEGKSLEEAILEAC 959
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 506314133 962 LLRFRPILMTTMAALFGALPLMLSAGVGAELRRPLGICMVGGLIMSQILTLFTTPVVYLLFD 1023
Cdd:pfam00873 960 RLRLRPILMTALAAILGVLPLALSTGAGSELQQPLGIVVFGGLVTSTVLTLLVVPVFYVLFH 1021
|
|
| PRK10614 |
PRK10614 |
multidrug efflux system subunit MdtC; Provisional |
16-1034 |
0e+00 |
|
multidrug efflux system subunit MdtC; Provisional
Pssm-ID: 182589 [Multi-domain] Cd Length: 1025 Bit Score: 1060.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 16 FILRPVATTLFMVAILLAGIIGYRMLPVSALPAVDYPTIQVVTFYPGASPDVMTSAVTAPLERQLGQMSGLKQMASQSSG 95
Cdd:PRK10614 7 FIYRPVATILLSLAITLCGILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVNEMTSSSSL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 96 GASVITLQFQLTLPLDVAEQEVQAAINAASNLLPNDLPYPPIYNKVNPADPPILTLAVTSDAMPMTQIQDMVETRVAQKI 175
Cdd:PRK10614 87 GSTRIILQFDFDRDINGAARDVQAAINAAQSLLPSGMPSRPTYRKANPSDAPIMILTLTSDTYSQGQLYDFASTQLAQTI 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 176 SQVNGVGLVTLAGGQRPAVRVKLNAQAVAAQGLDSETIRTAINSANVNSAKGSLDGPTRSVTLSANDQMKSVDDYRKLII 255
Cdd:PRK10614 167 SQIDGVGDVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRQAISNANVRRPQGAVEDGTHRWQIQTNDELKTAAEYQPLII 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 256 AYKNGAPVRLQDVATIEQGAENSKLGAWANGKQAIVINVQRQPGVNVIETTDNIRQMLPELISSLPKSVDIKILTDRTTT 335
Cdd:PRK10614 247 HYNNGAAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDRIRAKLPELRETIPAAIDLQIAQDRSPT 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 336 IRASVKDVQFELLLAVVLVVMVIYLFLRSGIATLIPSIAVPLSLVGTFAIMYFCGFSINNLTLMALTIATGFVVDDAIVV 415
Cdd:PRK10614 327 IRASLEEVEQTLAISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVV 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 416 IENISRYIEQGEKPMAAALKGAGEIGFTIISLTFSLIAVLIPLFFMGDIVGRLFREFAITLAIAILISAVVSLTLTPMMC 495
Cdd:PRK10614 407 LENISRHLEAGMKPLQAALQGVREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLFREFAVTLSVAIGISLLVSLTLTPMMC 486
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 496 ARMLKSesqvkHNRFEQASEHFFKRIIA----GYTVWLKKALNHPLITLGIALSTLALTALLYIIIPKGFFPLQDNGLIQ 571
Cdd:PRK10614 487 AWLLKS-----SKPREQKRLRGFGRMLValqqGYGRSLKWVLNHTRWVGVVLLGTIALNVWLYISIPKTFFPEQDTGRLM 561
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 572 GTLEAPQSISFSAMADKQRQVSSLLLQDPAVENVTTFVGvdGSNptLNNGRLQITLKPINQRNDRIAEIIPRLQGKMASI 651
Cdd:PRK10614 562 GFIQADQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTG--GSR--VNSGMMFITLKPLSERSETAQQVIDRLRVKLAKE 637
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 652 PDVKLYLQPMQDLTIDTQVTRNQYQFTLQATSLDELSIWVPKLLAELKQRSELVDISSDWQARGLIAYIKVDRDIASRLG 731
Cdd:PRK10614 638 PGANLFLMAVQDIRVGGRQSNASYQYTLLSDDLAALREWEPKIRKALAALPELADVNSDQQDKGAEMALTYDRDTMARLG 717
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 732 ISMAAIDNALYNAFGQRLISTIYTQANQYRVVLEHDMKSTPGLAAFDNIRLNGTDGNIVPLSTIATVEQRFGPLAINHLA 811
Cdd:PRK10614 718 IDVQAANSLLNNAFGQRQISTIYQPLNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPANAPLSVNHQG 797
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 812 QFPATTFSFNVSGNASLEQSVNAVRNAAQLIEMPKDMTIKFQGTTLAFESALGNTLWLIAAAVTAMYIVLGILYESFIHP 891
Cdd:PRK10614 798 LSAASTISFNLPTGKSLSDASAAIERAMTQLGVPSTVRGSFAGTAQVFQETMNSQLILILAAIATVYIVLGILYESYVHP 877
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 892 VTILSTLPTAGVGALLALMMTGQELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGLPPYEAIYQACLLRFRPILMT 971
Cdd:PRK10614 878 LTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRNGNLTAQEAIFQACLLRFRPIMMT 957
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 506314133 972 TMAALFGALPLMLSAGVGAELRRPLGICMVGGLIMSQILTLFTTPVVYLLFDKLaRYRRNRKP 1034
Cdd:PRK10614 958 TLAALFGALPLVLSGGDGAELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRL-RLRFSRKP 1019
|
|
| 2A0602 |
TIGR00915 |
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Proteins ... |
13-1025 |
6.71e-167 |
|
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate]
Pssm-ID: 273335 [Multi-domain] Cd Length: 1044 Bit Score: 518.13 E-value: 6.71e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 13 SRQFILRPVATTLFMVAILLAGIIGYRMLPVSALPAVDYPTIQVVTFYPGASPDVMTSAVTAPLERQLGQMSGLKQMASQ 92
Cdd:TIGR00915 2 AKFFIDRPIFAWVIAIIIMLAGTLSILSLPVSQYPSIAPPAITVSASYPGASAQTVQDTVTQVIEQNMNGIDGLRYMSSS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 93 SSG-GASVITLQFQLTLPLDVAEQEVQAAINAASNLLPNDLPYPPIynKVNPA-DPPILTLAVTSDAMPMTQ--IQDMVE 168
Cdd:TIGR00915 82 SDSdGSMTITLTFEQGTDPDIAQVQVQNKLQLATPLLPQEVQRQGV--RVEKAsSNFLMVIGLVSDDGSMTKedLSDYAA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 169 TRVAQKISQVNGVGLVTLAGGQRpAVRVKLNAQAVAAQGLDSETIRTAINSANVNSAKGSL------DGPTRSVTLSAND 242
Cdd:TIGR00915 160 SNMVDPLSRLEGVGDVQLFGSQY-AMRIWLDPAKLNSYQLTPADVISAISAQNAQISAGQLgglpavPGQQLNATIIAQT 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 243 QMKSVDDYRKLII-AYKNGAPVRLQDVATIEQGAENSKLGAWANGKQAIVINVQRQPGVNVIETTDNIRQMLPELISSLP 321
Cdd:TIGR00915 239 RLQTPEQFENILLkVNTDGSQVRLKDVARVELGGENYSISARFNGKPASGLAIKLATGANALDTAKAVKAELAVLEPFFP 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 322 KSVDIKILTDRTTTIRASVKDVQFELLLAVVLVVMVIYLFLRSGIATLIPSIAVPLSLVGTFAIMYFCGFSINNLTLMAL 401
Cdd:TIGR00915 319 QGMKYVYPYDTTPFVEASIEEVVHTLIEAIVLVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFAM 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 402 TIATGFVVDDAIVVIENISRYI-EQGEKPMAAALKGAGEIGFTIISLTFSLIAVLIPLFFMGDIVGRLFREFAITLAIAI 480
Cdd:TIGR00915 399 VLAIGLLVDDAIVVVENVERVMaEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAM 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 481 LISAVVSLTLTPMMCARMLKSESQVKHNrfEQASEHF------FKRIIAGYTVWLKKALNHPLITLGIALSTLALTALLY 554
Cdd:TIGR00915 479 ALSVLVALILTPALCATMLKPIEKGEHH--EKKGGFFgwfnrmFDSSTHGYENGVGKILRRRGRYLLVYVLLVGGMVFLF 556
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 555 IIIPKGFFPLQDNGLIQGTLEAPQSISFSAMADKQRQVSSLLLQDPA--VENVTTFVGVDGSNPTLNNGRLQITLKPINQ 632
Cdd:TIGR00915 557 VRLPTSFLPDEDQGVFMTIVQLPAGATAERTQAVLAQVTKYLLAKEKanVESVFTVNGFSFAGRGQNMGMAFIRLKDWEE 636
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 633 R---NDRIAEIIPRLQGKMASIPD---VKLYLQPMQDLTidtqvTRNQYQFTLQA---TSLDELSIWVPKLLAELKQRSE 703
Cdd:TIGR00915 637 RtgkENSVFAIAGRATGHFMQIKDamvIAFVPPAILELG-----NATGFDFFLQDragLGHEALLQARNQLLGLAAQNPA 711
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 704 LVDISSDWQARGLIAYIKVDRDIASRLGISMAAIDNALYNAFGQRLISTIYTQANQYRVVLEHDMKSTPGLAAFDNIRLN 783
Cdd:TIGR00915 712 LTRVRPNGLEDEPQLKIDIDREKAQALGVSIADINTTLSTAWGSSYVNDFIDRGRVKRVYVQAEEDARMSPEDINKWYVR 791
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 784 GTDGNIVPLSTIATVEQRFGPLAINHLAQFPATTFSFNVSGNASLEQSVNAVRNAAQliEMPKDmtIKFQGTTLAFESAL 863
Cdd:TIGR00915 792 NASGEMVPFSAFATVRWEYGSPQLERYNGLPSMEILGSAAPGVSTGQAMAAMEAIAQ--KLPPG--FGFSWTGMSYEERL 867
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 864 --GNTLWLIAAAVTAMYIVLGILYESFIHPVTILSTLPTAGVGALLALMMTGQELDVIAIIGIILLIGIVKKNAIMMIDF 941
Cdd:TIGR00915 868 sgSQAPALYALSLLVVFLCLAALYESWSIPVSVMLVVPLGIIGALLATTLRGLSNDVYFQVGLLTTIGLSAKNAILIVEF 947
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 942 AlAAEREQGLPPYEAIYQACLLRFRPILMTTMAALFGALPLMLSAGVGAELRRPLGICMVGGLIMSQILTLFTTPVVYLL 1021
Cdd:TIGR00915 948 A-KELMAQGKSIVEAALEAARLRLRPILMTSLAFILGVVPLAISTGAGSGSQHAIGTGVFGGMVTATVLAIFFVPLFYVV 1026
|
....
gi 506314133 1022 FDKL 1025
Cdd:TIGR00915 1027 VRRL 1030
|
|
| CusA |
COG3696 |
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism]; |
25-1032 |
2.96e-134 |
|
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism];
Pssm-ID: 442911 [Multi-domain] Cd Length: 1031 Bit Score: 431.76 E-value: 2.96e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 25 LFMVAILLAGIIGYRMLPVSALPAVDYPTIQVVTFYPGASPDVMTSAVTAPLERQLGQMSGLKQMASQSSGGASVITLQF 104
Cdd:COG3696 18 LLTLLLAAAGIYSLRRLPIDAFPDITNVQVQVITEAPGLSPEEVEQQVTYPIETALNGLPGVKEVRSISRFGLSVVTVIF 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 105 QLTLPLDVAEQEVQAAINAASNLLPNDlpyppiynkVNPADPPILT-------LAVTSDAMPMTQ-----IQDMVetrVA 172
Cdd:COG3696 98 EDGTDIYWARQLVLERLQQVREQLPAG---------VTPELGPISTglgeiyqYTLESDPGKYSLmelrtLQDWV---IR 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 173 QKISQVNGVGLVTLAGGQRPAVRVKLNAQAVAAQGLDSETIRTAINSANVNSAKGSLDGPTRSVTLSANDQMKSVDDYRK 252
Cdd:COG3696 166 PQLRSVPGVAEVNSFGGFVKQYQVLVDPAKLRAYGLTLDDVIEALERNNANVGGGYIERGGQEYLVRGIGLIRSLEDIEN 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 253 LIIAYKNGAPVRLQDVATIEQGAENsKLGAWA-NGKQAIVI-NVQRQPGVNVIETTDNIRQMLPELISSLPKSVDIKILT 330
Cdd:COG3696 246 IVVKTRNGTPVLLRDVAEVRIGPAP-RRGAATlNGEGEVVGgIVLMLKGENALEVIEAVKAKLAELKPSLPEGVKIVPFY 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 331 DRTTTIRASVKDVQFELLLAVVLVVMVIYLFLRSGIATLIPSIAVPLSLVGTFAIMYFCGFSINNLTLMALTIATGFVVD 410
Cdd:COG3696 325 DRSDLIDRAIHTVTKNLLEGALLVILVLFLFLGNLRAALIVALAIPLSLLFAFIVMRLFGISANLMSLGGLAIDFGIIVD 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 411 DAIVVIENISRYIEQ------GEKPMAAALKGAGEIGFTIISLTFSLIAVLIPLFFMGDIVGRLFREFAITLAIAILISA 484
Cdd:COG3696 405 GAVVMVENILRRLEEnraagtPRERLEVVLEAAREVRRPIFFATLIIILVFLPIFTLEGVEGKLFRPMALTVIFALLGAL 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 485 VVSLTLTPMMCARMLKSESQVKHNRfeqasehFFKRIIAGYTVWLKKALNHPLITLGIALSTLALTALLYIIIPKGFFPL 564
Cdd:COG3696 485 LLSLTLVPVLASLLLRGKVPEKENP-------LVRWLKRLYRPLLRWALRHPKLVLAVALVLLVLALALFPRLGSEFLPE 557
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 565 QDNG--LIQGTLeaPQSISFSAMADKQRQVSSLLLQDPAVENVTTFVGV--DGSNPT-LNNGRLQITLKPINQRNDRI-- 637
Cdd:COG3696 558 LDEGdlLVMATL--PPGISLEESVELGQQVERILKSFPEVESVVSRTGRaeDATDPMgVNMSETFVILKPRSEWRSGRtk 635
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 638 AEIIPRLQGKMASIPDVKL-YLQPMQD-----LT-IDTQVtrnqyqftlqA-----TSLDELSIWVPKLLAELKQRSELV 705
Cdd:COG3696 636 EELIAEMREALEQIPGVNFnFSQPIQMrvdelLSgVRADV----------AvkifgDDLDVLRRLAEQIEAVLKTVPGAA 705
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 706 DISSDWQARGLIAYIKVDRDIASRLGISMAAIDNALYNAFGQRLISTIYTQANQY--RVVLEHDMKSTPglAAFDNIRLN 783
Cdd:COG3696 706 DVQVERVTGLPQLDIRIDRDAAARYGLNVADVQDVVETAIGGKAVGQVYEGERRFdiVVRLPEELRDDP--EAIRNLPIP 783
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 784 GTDGNIVPLSTIATVEQRFGPLAINHLAQFPATTFSFNVSGnASLEQSVNAVRNA-AQLIEMPKDMTIKFQGTTLAFESA 862
Cdd:COG3696 784 TPSGAQVPLSQVADIEVVEGPNQISRENGRRRIVVQANVRG-RDLGSFVAEAQAKvAEQVKLPPGYYIEWGGQFENLQRA 862
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 863 LGNTLWLIAAAVTAMYIVLGILYESFIHPVTILSTLPTAGVGALLALMMTGQEL--------------DVIaiigiilli 928
Cdd:COG3696 863 TARLAIVVPLALLLIFLLLYLAFGSVRDALLILLNVPFALIGGVLALWLRGMPLsvsagvgfialfgvAVL--------- 933
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 929 givkkNAIMMIDFALAAeREQGLPPYEAIYQACLLRFRPILMTTMAALFGALPLMLSAGVGAELRRPLGICMVGGLIMSQ 1008
Cdd:COG3696 934 -----NGVVLVSYINQL-RAEGLDLREAIIEGALERLRPVLMTALVAALGLLPMALSTGPGSEVQRPLATVVIGGLITST 1007
|
1050 1060
....*....|....*....|....
gi 506314133 1009 ILTLFTTPVVYLLFDKLARYRRNR 1032
Cdd:COG3696 1008 LLTLLVLPALYLLFGRRRLRRAAA 1031
|
|
| PRK09579 |
PRK09579 |
multidrug efflux RND transporter permease subunit; |
16-1024 |
1.13e-132 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169983 [Multi-domain] Cd Length: 1017 Bit Score: 427.33 E-value: 1.13e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 16 FILRPVATTLFMVAILLAGIIGYRMLPVSALPAVDYPTIQVVTFYPGASPDVMTSAVTAPLERQLGQMSGLKQMASQSSG 95
Cdd:PRK09579 7 FIRRPVLASVVSLLIVLLGFQAWSKLQIRQYPQMENALITVTTAYPGANAETIQGYITQPLQQSLASAEGIDYMTSVSRQ 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 96 GASVITLQFQLTLPLDVAEQEVQAAINAASNLLPNDLPyPPIYNKVNPADPPILTLAVTSDAMPMTQIQDMVETRVAQKI 175
Cdd:PRK09579 87 NFSIISIYARIGADSDRLFTELLAKANEVKNQLPQDAE-DPVLSKEAADASALMYISFYSEEMSNPQITDYLSRVIQPKL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 176 SQVNGVGLVTLAGGQRPAVRVKLNAQAVAAQGLDSETIRTAINSANVNSAKGSLDGPTRSVTLSANDQMKSVDDYRKLII 255
Cdd:PRK09579 166 ATLPGMAEAEILGNQVFAMRLWLDPVKLAGFGLSAGDVTQAVRRYNFLSAAGEVKGEYVVTSINASTELKSAEAFAAIPV 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 256 AYKNGAPVRLQDVATIEQGAENSKLGAWANGKQAIVINVQRQPGVNVIETTDNIRQMLPELISSLPKSVDIKILTDRTTT 335
Cdd:PRK09579 246 KTSGDSRVLLGDVARVEMGAENYDSISSFDGIPSVYIGIKATPSANPLDVIKEVRAIMPELESQLPPNLKVSIAYDATLF 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 336 IRASVKDVQFELLLAVVLVVMVIYLFLRSGIATLIPSIAVPLSLVGTFAIMYFCGFSINNLTLMALTIATGFVVDDAIVV 415
Cdd:PRK09579 326 IQASIDEVVKTLGEAVLIVIVVVFLFLGALRSVLIPVVTIPLSMIGVLFFMQMMGYSINLLTLLAMVLAIGLVVDDAIVV 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 416 IENISRYIEQGEKPMAAALKGAGEIGFTIISLTFSLIAVLIPLFFMGDIVGRLFREFAITLAIAILISAVVSLTLTPMMC 495
Cdd:PRK09579 406 VENIHRHIEEGKSPFDAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVIISGIVALTLSPMMC 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 496 ARMLKSESQVKHnrFEQASEHFFKRIIAGYTVWLKKALNHPLITLGIALSTLALTALLYIIIPKGFFPLQDNGLIQGTLE 575
Cdd:PRK09579 486 ALLLRHEENPSG--LAHRLDRLFERLKQRYQRALHGTLNTRPVVLVFAVIVLALIPVLLKFTQSELAPEEDQGIIFMMSS 563
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 576 APQSISFSAMADKQRQVSSLLLQDPAVENVTTFVGVDGsnptLNNGRLQITLKPINQRNDRIAEIIPRLQGKMASIPDVK 655
Cdd:PRK09579 564 SPQPANLDYLNAYTDEFTPIFKSFPEYYSSFQINGFNG----VQSGIGGFLLKPWNERERTQMELLPLVQAKLEEIPGLQ 639
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 656 LYLQPMQDLTIDTQVTrnQYQFTLQATSLDELSIWVPKLLAELKQRS---ELVDISSDWQARGLIayIKVDRDIASRLGI 732
Cdd:PRK09579 640 IFGFNLPSLPGTGEGL--PFQFVINTANDYESLLQVAQRVKQRAQESgkfAFLDIDLAFDKPEVV--VDIDRAKAAQMGV 715
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 733 SMAAIDNALYNAFGQRLISTIYTQANQYRVV--LEHDMKSTPGLaaFDNIRLNGTDGNIVPLSTIATVEQRFGPLAINHL 810
Cdd:PRK09579 716 SMQDLGGTLATLLGEGEINRFTIDGRSYKVIaqVERPYRDNPGW--LNNYYVKNEQGQLLPLSTLITLSDRARPRQLNQF 793
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 811 AQFPATTFS-FNVsgnASLEQSVNAVRNAAQLiEMPKDMTIKFQGTTLAFESAlGNTLWL-IAAAVTAMYIVLGILYESF 888
Cdd:PRK09579 794 QQLNSAIISgFPI---VSMGEAIETVQQIARE-EAPEGFAFDYAGASRQYVQE-GSALWVtFGLALAIIFLVLAAQFESF 868
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 889 IHPVTILSTLPTAGVGALLALMMTGQELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGLPPYEAIYQACLLRFRPI 968
Cdd:PRK09579 869 RDPLVILVTVPLSICGALIPLFLGVSSMNIYTQVGLVTLIGLISKHGILIVEFANQLRHEQGLSRREAIEEAAAIRLRPV 948
|
970 980 990 1000 1010
....*....|....*....|....*....|....*....|....*....|....*.
gi 506314133 969 LMTTMAALFGALPLMLSAGVGAELRRPLGICMVGGLIMSQILTLFTTPVVYLLFDK 1024
Cdd:PRK09579 949 LMTTAAMVFGMVPLILATGAGAVSRFDIGLVIATGMSIGTLFTLFVLPCIYTLLAK 1004
|
|
| PRK09577 |
PRK09577 |
multidrug efflux RND transporter permease subunit; |
13-1032 |
8.39e-126 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169981 [Multi-domain] Cd Length: 1032 Bit Score: 409.24 E-value: 8.39e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 13 SRQFILRPVATTLFMVAILLAGIIGYRMLPVSALPAVDYPTIQVVTFYPGASPDVMTSAVTAPLERQLGQMSGLKQMASQ 92
Cdd:PRK09577 2 ARFFIDRPVFAWVISLFIMLGGIFAIRALPVAQYPDIAPPVVSIYATYPGASAQVVEESVTALIEREMNGAPGLLYTSAT 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 93 SSGGASVITLQFQLTLPLDVAEQEVQAAINAASNLLPNDLPYPPIYNKvNPADPPILTLAVTSDAMPMTQIQ--DMVETR 170
Cdd:PRK09577 82 SSAGQASLSLTFKQGVNADLAAVEVQNRLKTVEARLPEPVRRDGIQVE-KAADNIQLIVSLTSDDGRLTGVElgEYASAN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 171 VAQKISQVNGVGLVTLAGGQRpAVRVKLNAQAVAAQGLDSETIRTAINSANVNSAKGSL------DGPTRSVTLSANDQM 244
Cdd:PRK09577 161 VLQALRRVEGVGKVQFWGAEY-AMRIWPDPVKLAALGLTASDIASAVRAHNARVTIGDIgrsavpDSAPIAATVFADAPL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 245 KSVDDYRKLIIAYK-NGAPVRLQDVATIEQGAENSKLGAWANGKQAIVINVQRQPGVNVIETTDNIRQMLPELISSLPKS 323
Cdd:PRK09577 240 KTPEDFGAIALRARaDGSALYLRDVARIEFGGNDYNYPSYVNGKTATGMGIKLAPGSNAVATEKRVRATMDELSRYFPPG 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 324 VDIKILTDRTTTIRASVKDVQFELLLAVVLVVMVIYLFLRSGIATLIPSIAVPLSLVGTFAIMYFCGFSINNLTLMALTI 403
Cdd:PRK09577 320 VKYQIPYETSSFVRVSMNKVVTTLIEAGVLVFLVMFLFMQNFRATLIPTLVVPVALLGTFGVMLAAGFSINVLTMFGMVL 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 404 ATGFVVDDAIVVIENISRYI-EQGEKPMAAALKGAGEIGFTIISLTFSLIAVLIPLFFMGDIVGRLFREFAITLAIAILI 482
Cdd:PRK09577 400 AIGILVDDAIVVVENVERLMvEEGLSPYDATVKAMKQISGAIVGITVVLTSVFVPMAFFGGAVGNIYRQFALSLAVSIGF 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 483 SAVVSLTLTPMMCARMLKSESQVKHNR--FEQASEHFFKRIIAGYTVWLKKALNHPLITLGIALSTLALTALLYIIIPKG 560
Cdd:PRK09577 480 SAFLALSLTPALCATLLKPVDGDHHEKrgFFGWFNRFVARSTQRYATRVGAILKRPLRWLVVYGALTAAAALLFTRLPTA 559
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 561 FFPLQDNGLIQGTLEAPQSISFSAMADKQRQVSSLLLQDPAVENVTTFVGVDGSNPTLNNGRLQITLKPINQR---NDRI 637
Cdd:PRK09577 560 FLPDEDQGNFMVMVIRPQGTPLAETMQSVREVESYLRRHEPVAYTFALGGFNLYGEGPNGGMIFVTLKDWKERkaaRDHV 639
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 638 AEIIPRLQGKMASIPDVKLY---LQPMQDLTidtqvTRNQYQFTLQ---ATSLDELSIWVPKLLAELKQRSELVDISSDW 711
Cdd:PRK09577 640 QAIVARINERFAGTPNTTVFamnSPALPDLG-----STSGFDFRLQdrgGLGYAAFVAAREQLLAEGAKDPALTDLMFAG 714
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 712 QARGLIAYIKVDRDIASRLGISMAAIDNALYNAFGQRLISTIYTQANQYRVVLEHDMKSTPGLAAFDNIRLNGTDGNIVP 791
Cdd:PRK09577 715 TQDAPQLKLDIDRAKASALGVSMDEINTTLAVMFGSDYIGDFMHGSQVRRVIVQADGRHRLDPDDVKKLRVRNAQGEMVP 794
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 792 LSTIATVEQRFGPLAINHLAQFPattfSFNVSGNASLEQSVNAVRNAAQLIEMPKDMTIKFQGTTLAFESALGNTL--WL 869
Cdd:PRK09577 795 LAAFATLHWTLGPPQLTRYNGYP----SFTINGSAAPGHSSGEAMAAIERIAATLPAGIGYAWSGQSFEERLSGAQapML 870
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 870 IAAAVTAMYIVLGILYESFIHPVTILSTLPTAGVGALLALMMTGQELDVIAIIGIILLIGIVKKNAIMMIDFA--LAAer 947
Cdd:PRK09577 871 FALSVLVVFLALAALYESWSIPFAVMLVVPLGVIGAVLGVTLRGMPNDIYFKVGLIATIGLSAKNAILIVEVAkdLVA-- 948
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 948 eQGLPPYEAIYQACLLRFRPILMTTMAALFGALPLMLSAGVGAELRRPLGICMVGGLIMSQILTLFTTPVVYLLFDKLAR 1027
Cdd:PRK09577 949 -QRMSLADAALEAARLRLRPIVMTSLAFGVGVLPLAFASGAASGAQIAIGTGVLGGVITATVLAVFLVPLFFVVVGRLFD 1027
|
....*
gi 506314133 1028 YRRNR 1032
Cdd:PRK09577 1028 VGPRR 1032
|
|
| PRK15127 |
PRK15127 |
multidrug efflux RND transporter permease subunit AcrB; |
16-1040 |
3.44e-114 |
|
multidrug efflux RND transporter permease subunit AcrB;
Pssm-ID: 185081 [Multi-domain] Cd Length: 1049 Bit Score: 378.09 E-value: 3.44e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 16 FILRPVATTLFMVAILLAGIIGYRMLPVSALPAVDYPTIQVVTFYPGASPDVMTSAVTAPLERQLGQMSGLKQMASQS-S 94
Cdd:PRK15127 5 FIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSdS 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 95 GGASVITLQFQLTLPLDVAEQEVQAAINAASNLLPNDLPYPPIynKVNPADPPILTLA-VTSDAMPMTQ--IQDMVETRV 171
Cdd:PRK15127 85 TGTVQITLTFESGTDADIAQVQVQNKLQLAMPLLPQEVQQQGV--SVEKSSSSFLMVVgVINTDGTMTQedISDYVAANM 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 172 AQKISQVNGVGLVTLAGGQRpAVRVKLNAQAVAAQGLDSETIRTAINSANVNSAKGSLDG--PTRSVTLSAN----DQMK 245
Cdd:PRK15127 163 KDPISRTSGVGDVQLFGSQY-AMRIWMNPNELNKFQLTPVDVINAIKAQNAQVAAGQLGGtpPVKGQQLNASiiaqTRLT 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 246 SVDDYRKLIIAY-KNGAPVRLQDVATIEQGAENSKLGAWANGKQAIVINVQRQPGVNVIETTDNIRQMLPELISSLPKSV 324
Cdd:PRK15127 242 STEEFGKILLKVnQDGSRVRLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFPSGL 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 325 DIKILTDRTTTIRASVKDVQFELLLAVVLVVMVIYLFLRSGIATLIPSIAVPLSLVGTFAIMYFCGFSINNLTLMALTIA 404
Cdd:PRK15127 322 KIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLA 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 405 TGFVVDDAIVVIENISRYI-EQGEKPMAAALKGAGEIGFTIISLTFSLIAVLIPLFFMGDIVGRLFREFAITLAIAILIS 483
Cdd:PRK15127 402 IGLLVDDAIVVVENVERVMaEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALS 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 484 AVVSLTLTPMMCARMLKSESQVKHNRFEQASEHFFKRIIAGYTVWLKKALNHPLITLG----IALSTLALTALLYIIIPK 559
Cdd:PRK15127 482 VLVALILTPALCATMLKPIAKGDHGEGKKGFFGWFNRMFEKSTHHYTDSVGNILRSTGrylvLYLIIVVGMAYLFVRLPS 561
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 560 GFFPLQDNGLIQGTLEAPQSISFSAMADKQRQVSSLLL--QDPAVENVTTFVGVDGSNPTLNNGRLQITLKPINQR---N 634
Cdd:PRK15127 562 SFLPDEDQGVFLTMVQLPAGATQERTQKVLNEVTDYYLtkEKNNVESVFAVNGFGFAGRGQNTGIAFVSLKDWADRpgeE 641
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 635 DRIAEIIPRLQGKMASIPDVKLYLQPMQDLTIDTQVTRNQYQFTLQAT-SLDELSIWVPKLLAELKQRSE-LVDISSDWQ 712
Cdd:PRK15127 642 NKVEAITMRATRAFSQIKDAMVFAFNLPAIVELGTATGFDFELIDQAGlGHEKLTQARNQLLGEAAKHPDmLVGVRPNGL 721
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 713 ARGLIAYIKVDRDIASRLGISMAAIDNALYNAFGQRLISTIYTQANQYRVVLEHDMKSTPGLAAFDNIRLNGTDGNIVPL 792
Cdd:PRK15127 722 EDTPQFKIDIDQEKAQALGVSISDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAADGQMVPF 801
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 793 STIATVEQRFGPLAINHLAQFPattfSFNVSGNASLEQSVNAVRNAAQLIEMPKDMTIKFQGTTLAFESAL-GNTL-WLI 870
Cdd:PRK15127 802 SAFSSSRWEYGSPRLERYNGLP----SMEILGQAAPGKSTGEAMELMEELASKLPTGVGYDWTGMSYQERLsGNQApALY 877
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 871 AAAVTAMYIVLGILYESFIHPVTILSTLPTAGVGALLALMMTGQELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQG 950
Cdd:PRK15127 878 AISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEG 957
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 951 LPPYEAIYQACLLRFRPILMTTMAALFGALPLMLSAGVGAELRRPLGICMVGGLIMSQILTLFTTPVVYLlfdkLARYRR 1030
Cdd:PRK15127 958 KGLIEATLEAVRMRLRPILMTSLAFILGVMPLVISSGAGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFV----VVRRRF 1033
|
1050
....*....|
gi 506314133 1031 NRKPGELDNS 1040
Cdd:PRK15127 1034 SRKNEDIEHS 1043
|
|
| PRK10555 |
PRK10555 |
multidrug efflux RND transporter permease AcrD; |
16-1021 |
1.11e-109 |
|
multidrug efflux RND transporter permease AcrD;
Pssm-ID: 182544 [Multi-domain] Cd Length: 1037 Bit Score: 365.69 E-value: 1.11e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 16 FILRPVATTLFMVAILLAGIIGYRMLPVSALPAVDYPTIQVVTFYPGASPDVMTSAVTAPLERQLGQMSGLKQMASQSSG 95
Cdd:PRK10555 5 FIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRITANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSSQSSG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 96 -GASVITLQFQLTLPLDVAEQEVQAAINAASNLLPNDLPYPPIyNKVNPADPPILTLA-VTSD-AMPMTQIQDMVETRVA 172
Cdd:PRK10555 85 tGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQAVQNQGV-TVRKTGDTNILTIAfVSTDgSMDKQDIADYVASNIQ 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 173 QKISQVNGVGLVTLAGGQRpAVRVKLNAQAVAAQGLDSETIRTAINSANVNSAKGSLDGpTRSV-------TLSANDQMK 245
Cdd:PRK10555 164 DPLSRVNGVGDIDAYGSQY-SMRIWLDPAKLNSFQMTTKDVTDAIESQNAQIAVGQLGG-TPSVdkqalnaTINAQSLLQ 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 246 SVDDYRKLII-AYKNGAPVRLQDVATIEQGAENSKLGAWANGKQAIVINVQRQPGVNVIETTDNIRQMLPELISSLPKSV 324
Cdd:PRK10555 242 TPEQFRDITLrVNQDGSEVTLGDVATVELGAEKYDYLSRFNGKPASGLGVKLASGANEMATAKLVLNRLDELAQYFPHGL 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 325 DIKILTDRTTTIRASVKDVQFELLLAVVLVVMVIYLFLRSGIATLIPSIAVPLSLVGTFAIMYFCGFSINNLTLMALTIA 404
Cdd:PRK10555 322 EYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSINTLTMFAMVLA 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 405 TGFVVDDAIVVIENISRYI-EQGEKPMAAALKGAGEIGFTIISLTFSLIAVLIPLFFMGDIVGRLFREFAITLAIAILIS 483
Cdd:PRK10555 402 IGLLVDDAIVVVENVERIMsEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVSAMVLS 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 484 AVVSLTLTPMMCARMLKSESQVKHNR---FEQASEHFFKRIIAGYTVWLKKALNHPLITLGIALSTLALTALLYIIIPKG 560
Cdd:PRK10555 482 VLVAMILTPALCATLLKPLKKGEHHGqkgFFGWFNRMFNRNAERYEKGVAKILHRSLRWILIYVLLLGGMVFLFLRLPTS 561
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 561 FFPLQDNGLIQGTLEAPQSISFSAMADKQRQVSSLLLQDPAvENVTTFVGVDGSNPTLNN---GRLQITLKPINQR---N 634
Cdd:PRK10555 562 FLPLEDRGMFTTSVQLPSGSTQQQTLKVVEKVEKYYFTHEK-DNVMSVFATVGSGPGGNGqnvARMFIRLKDWDERdskT 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 635 DRIAEIIPRLQGKMASIPDVKLYLQpmQDLTIDTQVTRNQYQFTLQ---ATSLDELSIWVPKLLAELKQRSELVDISSDW 711
Cdd:PRK10555 641 GTSFAIIERATKAFNKIKEARVIAS--SPPAISGLGSSAGFDMELQdhaGAGHDALMAARNQLLALAAKNPELTRVRHNG 718
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 712 QARGLIAYIKVDRDIASRLGISMAAIDNALYNAFGQRLISTIYTQANQYRVVLEHDMKSTPGLAAFDNIRLNGTDGNIVP 791
Cdd:PRK10555 719 LDDSPQLQIDIDQRKAQALGVSIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRMLPDDINLWYVRNKDGGMVP 798
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 792 LSTIATVEQRFGPLAINHLAQFPATTFSFNVSGNASLEQSVNAVRNAAQliEMPKDMTIKFQGTTLAFESALGNTLWLIA 871
Cdd:PRK10555 799 FSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMDIMESLVK--QLPNGFGLEWTAMSYQERLSGAQAPALYA 876
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 872 AAVTAMYIVLGILYESFIHPVTILSTLPTAGVGALLALMMTGQELDVIAIIGIILLIGIVKKNAIMMIDFAlAAEREQGL 951
Cdd:PRK10555 877 ISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFA-NEMNQKGH 955
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 952 PPYEAIYQACLLRFRPILMTTMAALFGALPLMLSAGVGAELRRPLGICMVGGLIMSQILTLFTTPVVYLL 1021
Cdd:PRK10555 956 DLFEATLHASRQRLRPILMTSLAFIFGVLPMATSTGAGSGSQHAVGTGVMGGMISATILAIFFVPLFFVL 1025
|
|
| 2A0601 |
TIGR00914 |
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation ... |
25-1038 |
2.14e-82 |
|
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation antiporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 129992 [Multi-domain] Cd Length: 1051 Bit Score: 289.74 E-value: 2.14e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 25 LFMVAILLAGIIG---YRMLPVSALPAVDYPTIQVVTFYPGASPDVMTSAVTAPLERQLGQMSGLKQMASQSSGGASVIT 101
Cdd:TIGR00914 15 LVLLATLVMAILGiwsYNRLPIDAVPDITNVQVQINTSAPGYSPLEVEQRVTYPIETAMAGLPGLETTRSLSRYGLSQVT 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 102 LQFQLTLPLDVAEQEVQAAINAASNLLPNDLP--YPPI---------YNKVNPADPPILTLAVtSDAMPMTQIQDMVetr 170
Cdd:TIGR00914 95 VIFKDGTDLYFARQLVNERLQQARDNLPEGVSpeMGPIstglgeiflYTVEAEEGARKKDGGA-YTLTDLRTIQDWI--- 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 171 VAQKISQVNGVGLVTLAGGQRPAVRVKLNAQAVAAQGLDSETIRTAINSANVNSAKGSLDGPTRSVTLSANDQMKSVDDY 250
Cdd:TIGR00914 171 IRPQLRTVPGVAEVNSIGGYVKQFLVAPDPEKLAAYGLSLADVVNALERNNQNVGAGYIERRGEQYLVRAPGQVQSMDDI 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 251 RKLIIAYKNGAPVRLQDVATIEQGAENSKLGAWANGKQAIVINVQRQPGVNVIETTDNIRQMLPELISSLPKSVDIKILT 330
Cdd:TIGR00914 251 RNIVIATGEGVPIRIRDVARVQIGKELRTGAATENGKEVVLGTVFMLIGENSRTVAQAVGDKLETINKTLPEGVEIVTTY 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 331 DRTTTIRASVKDVQFELLLAVVLVVMVIYLFLRSGIATLIPSIAVPLSLVGTFAIMYFCGFSINNLTLMALtiATGFVVD 410
Cdd:TIGR00914 331 DRSQLVDAAIATVKKNLLEGALLVIVILFLFLGNIRAALIAATVIPLSLLITFIGMVFQGISANLMSLGAL--DFGLIVD 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 411 DAIVVIENISRYIEQGEKPMAAALK----------GAGEIGFTIISLTFSLIAVLIPLFFMGDIVGRLFREFAITLAIAI 480
Cdd:TIGR00914 409 GAVVIVENAHRRLAEAQHHHGRQLTlkerlhevfaASREVRRPLIFGQLIITLVFLPIFTLTGVEGKMFHPMAFTVVLAL 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 481 LISAVVSLTLTPMMCARMLKSESQVKHNRfeqasehFFKRIIAGYTVWLKKALNHPLITLGIALSTLALTALLYIIIPKG 560
Cdd:TIGR00914 489 AGAMILSLTFVPAAVALFIRGKVAEKENR-------LMRVLKRRYEPLLERVLAWPAVVLGAAAVSIVLVVWIASRVGGE 561
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 561 FFPLQDNG-LIQGTLEAPqSISFSAMADKQRQVSSLLLQDPAVENV-----TTFVGVDGSNPTLNNGrlQITLKPINQRN 634
Cdd:TIGR00914 562 FIPSLNEGdLAYQALRIP-GTSLAQSVAMQQTLEKLIKSFPEVARVfaktgTAEIATDPMPPNASDT--YIILKPESQWP 638
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 635 DRI---AEIIPRLQGKMASIP-DVKLYLQPMQdLTIDTQVT--RNQYQFTLQATSLDELSIWVPKLLAELKQRSELVDIS 708
Cdd:TIGR00914 639 EGKktkEDLIEEIQEATVRIPgNNYEFTQPIQ-MRFNELISgvRSDVAVKVFGDDLDDLDATAEKISAVLKGVPGAADVK 717
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 709 SDWQARGLIAYIKVDRDIASRLGISMAAIDNALYNAFGQRLISTIYTQANQYRVVLEHDMKSTPGLAAFDNIRL-----N 783
Cdd:TIGR00914 718 VEQTTGLPYLTVEIDREKAARYGLTVGDVQDTVATAVGGRMSGETFEGDRRFDIVIRLPESLRESPQALRQLPIplplsE 797
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 784 GTDGNIVPLSTIATVEQRFGPLAINHLAQFPATTFSFNVSGNASLEQSVNAVRNAAQLIEMPKDMTIKFQGTTLAFESAL 863
Cdd:TIGR00914 798 DARKQFIPLSDVADLRVSPGPNQISRENGKRRVVVSANVRGRDLGSFVDDAKKAIAEQVKLPPGYWITWGGQFEQLQSAT 877
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 864 GNTLWLIAAAVTAMYIVLGILYESFIHPVTILSTLPTAGVGALLALMMTGQELDVIAIIGIILLIGIVKKNAIMMIDFaL 943
Cdd:TIGR00914 878 KRLQIVVPVTLLLIFVLLYAAFGNVKDALLVFTGIPFALTGGVFALWLRGIPLSISAAVGFIALSGVAVLNGLVMISF-I 956
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 944 AAEREQGLPPYEAIYQACLLRFRPILMTTMAALFGALPLMLSAGVGAELRRPLGICMVGGLIMSQILTLFTTPVVYLLFd 1023
Cdd:TIGR00914 957 RKLLEEGPSLDEAVYEGALTRVRPVLMTALVASLGFVPMAIATGTGAEVQRPLATVVIGGIITATLLTLFVLPALYRLV- 1035
|
1050
....*....|....*
gi 506314133 1024 kLARYRRNRKPGELD 1038
Cdd:TIGR00914 1036 -HRRRHKGRKEHEPL 1049
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
358-542 |
1.48e-13 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 75.28 E-value: 1.48e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 358 IYLFLRSGIATLIPSIAVPLSLVGTFAIMYFCGFSINNLTLMALTIATGFVVDDAIVVIENISRYIEQGEKPMAAALKGA 437
Cdd:COG1033 235 LFLFFRSLRGVLLPLLVVLLAVIWTLGLMGLLGIPLSPLTILVPPLLLAIGIDYGIHLLNRYREERRKGLDKREALREAL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 438 GEIGFTIISLTFSLIAVLIPLFFMgDIvgRLFREFAITLAIAILISAVVSLTLTPMMCARMLKSESQVKHNRFEQASEHF 517
Cdd:COG1033 315 RKLGPPVLLTSLTTAIGFLSLLFS-DI--PPIRDFGIVAAIGVLLAFLTSLTLLPALLSLLPRPKPKTRRLKKPPELGRL 391
|
170 180
....*....|....*....|....*
gi 506314133 518 FKRIIagytvwlKKALNHPLITLGI 542
Cdd:COG1033 392 LAKLA-------RFVLRRPKVILVV 409
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
358-492 |
1.77e-11 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 68.35 E-value: 1.77e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 358 IYLFLRSGIATLIPSIAVPLSLVGTFAIMYFCGFSINNLTLMALTIATGFVVDDAIVVIENISRYIEQGEKPMAAALKGA 437
Cdd:COG1033 622 LLLAFRSLRLGLISLIPNLLPILLTFGLMGLLGIPLNIATAVVASIALGIGVDYTIHFLSRYREERRKGGDLEEAIRRAL 701
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 506314133 438 GEIGFTIISLTFSLIAVLIPLFFmGDIVGrlFREFAITLAIAILISAVVSLTLTP 492
Cdd:COG1033 702 RTTGKAILFTSLTLAAGFGVLLF-SSFPP--LADFGLLLALGLLVALLAALLLLP 753
|
|
| MMPL |
pfam03176 |
MMPL family; Members of this family are putative integral membrane proteins from bacteria. ... |
362-496 |
7.31e-07 |
|
MMPL family; Members of this family are putative integral membrane proteins from bacteria. Several of the members are mycobacterial proteins. Many of the proteins contain two copies of this aligned region. The function of these proteins is not known, although it has been suggested that they may be involved in lipid transport.
Pssm-ID: 308676 [Multi-domain] Cd Length: 332 Bit Score: 52.29 E-value: 7.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 362 LRSGIATLIPSIAVPLSLVGTFAIMYFC----GFSINNLT---LMALTIATGfvVDDAIVVIENISRYIEQGEKPMAAAL 434
Cdd:pfam03176 163 YRSVVAALLPLLTVGLSLGAAQGLVAILahilGIGLSTFAlnlLVVLLIAVG--TDYALFLVSRYREELRAGEDREEAVI 240
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 506314133 435 KGAGEIGFTIislTFSLIAVLIPLFFMGDIVGRLFREFAITLAIAILISAVVSLTLTPMMCA 496
Cdd:pfam03176 241 RAVRGTGKVV---TAAGLTVAIAMLALSFARLPVFAQVGPTIAIGVLVDVLAALTLLPALLA 299
|
|
| YdfJ |
COG2409 |
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function ... |
360-492 |
5.96e-06 |
|
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function prediction only];
Pssm-ID: 441964 [Multi-domain] Cd Length: 697 Bit Score: 50.53 E-value: 5.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 360 LFLRSGIATLIPSIAVPLSLVGTFAIMYFCG--FSINNLT---LMALTIATGfvVDDAIVVIeniSRYIEQ---GEKP-- 429
Cdd:COG2409 188 LVFRSLVAALLPLLTAGLAVGVALGLLALLAafTDVSSFApnlLTMLGLGVG--IDYALFLV---SRYREElraGEDRee 262
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 506314133 430 -MAAALKGAGEI----GFTIIsltfslIAvLIPLFFMGDivgRLFREFAITLAIAILISAVVSLTLTP 492
Cdd:COG2409 263 aVARAVATAGRAvlfsGLTVA------IA-LLGLLLAGL---PFLRSMGPAAAIGVAVAVLAALTLLP 320
|
|
| secD |
PRK05812 |
preprotein translocase subunit SecD; Reviewed |
358-494 |
1.50e-05 |
|
preprotein translocase subunit SecD; Reviewed
Pssm-ID: 235615 [Multi-domain] Cd Length: 462 Bit Score: 48.68 E-value: 1.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 358 IYLFLRSGIATLIPSIAVPLSLVGTFAIMYFCGFSinnLTL-----MALTIatGFVVDdAIVVI-ENISRYIEQGEKPMA 431
Cdd:PRK05812 312 LFMILYYRLFGLIANIALVANLVLILAVLSLLGAT---LTLpgiagIVLTI--GMAVD-ANVLIfERIREELREGRSLRS 385
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 432 AAlkgagEIGF-----TIIS--LTfSLIAVLIpLFFMGdiVGrLFREFAITLAIAILISAVVSLTLTPMM 494
Cdd:PRK05812 386 AI-----EAGFkrafsTILDsnIT-TLIAAII-LYALG--TG-PVKGFAVTLGIGILTSMFTAITVTRAL 445
|
|
| secD |
TIGR01129 |
protein-export membrane protein SecD; Members of this family are highly variable in length ... |
358-491 |
3.01e-05 |
|
protein-export membrane protein SecD; Members of this family are highly variable in length immediately after the well-conserved motif LGLGLXGG at the amino-terminal end of this model. Archaeal homologs are not included in the seed and score between the trusted and noise cutoffs. SecD from Mycobacterium tuberculosis has a long Pro-rich insert. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273456 [Multi-domain] Cd Length: 397 Bit Score: 47.67 E-value: 3.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 358 IYLFLRSGIATLIPSIAVPLSLVGTFAIMYFCGFSinnLTL-----MALTIatGFVVDDAIVVIENISRYIEQGEKPMAA 432
Cdd:TIGR01129 263 VFMILYYRLFGLIAAIALVINIVLILAILSAFGAT---LTLpgiagLILTI--GMAVDANVLIYERIKEELRLGKSVRQA 337
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 506314133 433 AlkgagEIGF-----TIIS--LTfSLIAVLIpLFFMGdiVGrLFREFAITLAIAILISAVVSLTLT 491
Cdd:TIGR01129 338 I-----EAGFerafsTIFDanIT-TLIAALI-LYVFG--TG-PVKGFAVTLAIGIIASLFTALVFT 393
|
|
| SecD |
COG0342 |
Preprotein translocase subunit SecD [Intracellular trafficking, secretion, and vesicular ... |
358-494 |
3.69e-05 |
|
Preprotein translocase subunit SecD [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440111 [Multi-domain] Cd Length: 434 Bit Score: 47.42 E-value: 3.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 358 IYLFLRSGIATLIPSIAVPLSLVGTFAIMYFCGFsinNLTL-----MALTIATGfvVDDAIVVIEnisRYIEQGE--KPM 430
Cdd:COG0342 286 LFMLLYYRLPGLVANIALALNVVLLLGVLSLLGA---TLTLpgiagIILTIGMA--VDANVLIFE---RIREELRagRSL 357
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 506314133 431 AAALkgagEIGF-----TIIS--LTfSLIAVLIpLFFMGdiVGRLfREFAITLAIAILISAVVSLTLTPMM 494
Cdd:COG0342 358 RAAI----EAGFkrafsTILDanVT-TLIAAVV-LFVLG--TGPV-KGFAVTLILGILISMFTAVPVTRPL 419
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
822-1039 |
4.94e-05 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 47.55 E-value: 4.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 822 VSGNASLEQSVNAVRNAAQLIEmPKDMTIKFQGT---TLAFESALGNTL-WLIAAAVTAMYIVLGILYESFIHPVTILST 897
Cdd:COG1033 173 LSSDLDRKEVVAEIRAIIAKYE-DPGVEVYLTGFpvlRGDIAEAIQSDLaIFFPLALLLILLLLFLFFRSLRGVLLPLLV 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 898 LpTAGVGALLALM-MTGQELDVIAiigiilligivkkNAIMMIDFALA------------AEREQGLPPYEAIYQACLLR 964
Cdd:COG1033 252 V-LLAVIWTLGLMgLLGIPLSPLT-------------ILVPPLLLAIGidygihllnryrEERRKGLDKREALREALRKL 317
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 506314133 965 FRPILMTTMAALFGALPLMLSA-GVGAELrrplGICMVGGLIMSQILTLFTTPVVYLLFDKL-ARYRRNRKPGELDN 1039
Cdd:COG1033 318 GPPVLLTSLTTAIGFLSLLFSDiPPIRDF----GIVAAIGVLLAFLTSLTLLPALLSLLPRPkPKTRRLKKPPELGR 390
|
|
| PRK13024 |
PRK13024 |
bifunctional preprotein translocase subunit SecD/SecF; Reviewed |
358-501 |
5.45e-05 |
|
bifunctional preprotein translocase subunit SecD/SecF; Reviewed
Pssm-ID: 237276 [Multi-domain] Cd Length: 755 Bit Score: 47.15 E-value: 5.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 358 IYLFLRSGIATLIPSIAVPLSLVGTFAIMYFCGFSINNLTLMALTIATGFVVDDAIVVIENISRYIEQGEKPMAAALKGA 437
Cdd:PRK13024 281 LFMLVYYGLPGLIANIALLLYIFLTLGALSSLGAVLTLPGIAGLVLGIGMAVDANVLIFERIKEELRKGKSLKKAFKKGF 360
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 506314133 438 GEIGFTII--SLTfSLIAVLIpLFFMGDIvgrLFREFAITLAIAILISAVVSLTLTPMMCARMLKS 501
Cdd:PRK13024 361 KNAFSTILdsNIT-TLIAAAI-LFFFGTG---PVKGFATTLIIGILASLFTAVFLTRLLLELLVKR 421
|
|
| 2A0604s01 |
TIGR00916 |
protein-export membrane protein, SecD/SecF family; The SecA,SecB,SecD,SecE,SecF,SecG and SecY ... |
358-488 |
2.77e-04 |
|
protein-export membrane protein, SecD/SecF family; The SecA,SecB,SecD,SecE,SecF,SecG and SecY proteins form the protein translocation appartus in prokaryotes. This family is specific for the SecD and SecF proteins. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273336 [Multi-domain] Cd Length: 192 Bit Score: 43.01 E-value: 2.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 358 IYLFLRSGIATLIPSIAVPLS-LVGTFAIMYFCGFSINNLTLMALTIATGFVVDDAIVVIENISryiEQGEKPMAAALKG 436
Cdd:TIGR00916 62 LYMLLRYEWRGAIAAIAALVHdVILILGVLSLFGATLTLPGIAGLLTIIGYSVDDTVVIFDRIR---EELRKYKGRTFRE 138
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 506314133 437 AGEIGF------TIISLTFSLIAVLIPLFFMGDIVgrlfREFAITLAIAILISAVVSL 488
Cdd:TIGR00916 139 AINLGInqtlsrIIDTNVTTLLAVLALYVFGGGAI----KGFALTLGIGVIAGTYSSI 192
|
|
| PRK13023 |
PRK13023 |
protein translocase subunit SecDF; |
358-501 |
2.19e-03 |
|
protein translocase subunit SecDF;
Pssm-ID: 171842 [Multi-domain] Cd Length: 758 Bit Score: 41.91 E-value: 2.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 358 IYLFLRSGIATLIPSIAVPLSLVGTFAIMYFCGFSINNLTLMALTIATGFVVDDAIVVIENISRYIEQGEKPMAAALKGA 437
Cdd:PRK13023 293 LFMVLSYGILGVIALVALVVNIIILTAVLSLIGASISLASIAGLVLTIGLAVDAHILIYERVREDRRKGYSVVQAMESGF 372
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 506314133 438 GEIGFTIISLTFSLIAVLIPLFFMGDivgRLFREFAITLAIAILISAVVSLTLTPMMCARMLKS 501
Cdd:PRK13023 373 YRALSTIVDANLTTLIAALVLFLLGS---GTVHGFALTVAIGIGTTLFTTLTFTRLLIAQWVRT 433
|
|
| PRK14726 |
PRK14726 |
protein translocase subunit SecDF; |
365-496 |
5.32e-03 |
|
protein translocase subunit SecDF;
Pssm-ID: 237805 [Multi-domain] Cd Length: 855 Bit Score: 40.86 E-value: 5.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 506314133 365 GIATLIPSIAVPLSLVGTFAIMYFCGFSinnLTL-----MALTIatGFVVDDAIVVIENIsRYIEQGEKPMAAALkgagE 439
Cdd:PRK14726 394 GFLGVIAVIALIVNVVLIIAVLSLLGAT---LTLpgiagIVLTI--GMAVDSNVLIYERI-REEEKTGHSLIQAL----D 463
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 506314133 440 IGF-----TIISLTFSLIAVLIPLFFMGDivgRLFREFAITLAIAILISAVVSLTLTPMMCA 496
Cdd:PRK14726 464 RGFsralaTIVDANVTILIAAVILFFLGS---GAVRGFAVTLAVGILTTVFTAFTLTRSLVA 522
|
|
|