NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|515165642|ref|WP_016794171|]
View 

MULTISPECIES: F0F1 ATP synthase subunit gamma [Vibrio]

Protein Classification

FoF1 ATP synthase subunit gamma( domain architecture ID 10792582)

FoF1 ATP synthase subunit gamma is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

EC:  7.1.2.2
Gene Ontology:  GO:0045261|GO:0005524|GO:0046933|GO:0042777
PubMed:  25730883|30888962|25667968|18216260|8951091
SCOP:  4000503

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-288 3.04e-175

F0F1 ATP synthase subunit gamma; Validated


:

Pssm-ID: 235535  Cd Length: 284  Bit Score: 485.00  E-value: 3.04e-175
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642   1 MAGAKEIRNKIGSVKSTQKITKAMEMVAASKMRRSQDAMEATRPYAETMRKVIGHLANGSlEYKHPYLEEREAKRVGYII 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASAS-EYDHPLLVEREVKRVGYIV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642  81 VSTDRGLCGGLNINLFKKAMNDMKDWSEKGADVELAIVGSKATAFFNNSGAKVAAQVSGLGDRPSLEDLIGSVSVMLKKY 160
Cdd:PRK05621  80 VTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDAY 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642 161 DEGELDRLFVVFNKFENTMVQEPTIDQLLPLPKSDSEEmkrSHSWDYIYEPEPKPLLDALLVRYVESQVYQGVVENLACE 240
Cdd:PRK05621 160 DNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEE---ETSWDYEYEPDAEEILDALLPRYVESQIYQALLENKASE 236

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 515165642 241 QAARMIAMKSATDNAGDIIDDLELVYNKARQAAITQELSEIVSGAAAV 288
Cdd:PRK05621 237 QAARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
 
Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-288 3.04e-175

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 485.00  E-value: 3.04e-175
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642   1 MAGAKEIRNKIGSVKSTQKITKAMEMVAASKMRRSQDAMEATRPYAETMRKVIGHLANGSlEYKHPYLEEREAKRVGYII 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASAS-EYDHPLLVEREVKRVGYIV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642  81 VSTDRGLCGGLNINLFKKAMNDMKDWSEKGADVELAIVGSKATAFFNNSGAKVAAQVSGLGDRPSLEDLIGSVSVMLKKY 160
Cdd:PRK05621  80 VTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDAY 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642 161 DEGELDRLFVVFNKFENTMVQEPTIDQLLPLPKSDSEEmkrSHSWDYIYEPEPKPLLDALLVRYVESQVYQGVVENLACE 240
Cdd:PRK05621 160 DNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEE---ETSWDYEYEPDAEEILDALLPRYVESQIYQALLENKASE 236

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 515165642 241 QAARMIAMKSATDNAGDIIDDLELVYNKARQAAITQELSEIVSGAAAV 288
Cdd:PRK05621 237 QAARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-288 2.55e-166

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 462.31  E-value: 2.55e-166
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642   1 MAGAKEIRNKIGSVKSTQKITKAMEMVAASKMRRSQDAMEATRPYAETMRKVIGHLANGSLEYKHPYLEEREAKRVGYII 80
Cdd:COG0224    1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASPEYDHPLLEEREVKRVGLIV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642  81 VSTDRGLCGGLNINLFKKAMNDMKDWSEKGADVELAIVGSKATAFFNNSGAKVAAQVSGLGDRPSLEDLIGSVSVMLKKY 160
Cdd:COG0224   81 ITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLDAF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642 161 DEGELDRLFVVFNKFENTMVQEPTIDQLLPLPKSDSEEMKRSHSWDYIYEPEPKPLLDALLVRYVESQVYQGVVENLACE 240
Cdd:COG0224  161 LAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAEWETRADYIFEPSPEEILDALLPRYLESQIYQALLESAASE 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 515165642 241 QAARMIAMKSATDNAGDIIDDLELVYNKARQAAITQELSEIVSGAAAV 288
Cdd:COG0224  241 HAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
ATP-synt pfam00231
ATP synthase;
5-287 9.59e-146

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 410.38  E-value: 9.59e-146
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642    5 KEIRNKIGSVKSTQKITKAMEMVAASKMRRSQDAMEATRPYAETMRKVIGHLANGSLEYKHPYLEEREAKRVGYIIVSTD 84
Cdd:pfam00231   3 KEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASPEDSHPLLERREVKKVGLIVITSD 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642   85 RGLCGGLNINLFKKAMNDMKDWSEKGADVELAIVGSKATAFFNNSGAKVAAQVSG-LGDRPSLEDLIGSVSVMLKKYDEG 163
Cdd:pfam00231  83 RGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDYFKKRGYEVILEFTGsLGDKPTFEEAAEIADELLDAFLAG 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642  164 ELDRLFVVFNKFENTMVQEPTIDQLLPLPKSDSEEMKRSHsWDYIYEPEPKPLLDALLVRYVESQVYQGVVENLACEQAA 243
Cdd:pfam00231 163 EIDEVYLVYNRFVSAISQEPTVEQLLPLDPEEEEEEEESL-ADYEFEPSAEEVLDALLPRYLESQIYGALLESAASEQAA 241

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 515165642  244 RMIAMKSATDNAGDIIDDLELVYNKARQAAITQELSEIVSGAAA 287
Cdd:pfam00231 242 RMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-288 1.01e-139

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 395.12  E-value: 1.01e-139
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642    2 AGAKEIRNKIGSVKSTQKITKAMEMVAASKMRRSQDAMEATRPYAETMRKVIGHLANGSLEYKHPYLEEREAKRVGYIIV 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLLNVDHPLLKSREVKKVGILVI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642   82 STDRGLCGGLNINLFKKAMNDMKDWSEKGADVELAIVGSKATAFFNNSGAKVAAQVSGLGDRPSLEDLIGSVSVMLKKYD 161
Cdd:TIGR01146  81 TSDRGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLDAFD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642  162 EGELDRLFVVFNKFENTMVQEPTIDQLLPLPKSDSEEmKRSHSWDYIYEPEPKPLLDALLVRYVESQVYQGVVENLACEQ 241
Cdd:TIGR01146 161 AGEFDELYIVYNKFVSSISQEPTVKQLLPLSAQGPDE-GFKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLESAASEQ 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 515165642  242 AARMIAMKSATDNAGDIIDDLELVYNKARQAAITQELSEIVSGAAAV 288
Cdd:TIGR01146 240 AARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-285 1.47e-127

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 364.21  E-value: 1.47e-127
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642   2 AGAKEIRNKIGSVKSTQKITKAMEMVAASKMRRSQDAMEATRPYAETMRKVIGHLANGSLEYKHPYLEEREAKRVGYIIV 81
Cdd:cd12151    1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDEDPPLLEKREVKKVLLIVI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642  82 STDRGLCGGLNINLFKKAMNDMKDwsEKGADVELAIVGSKATAFFNNSGAKVAAQVSGLGDRPSLEDLIGSVSVMLKKYD 161
Cdd:cd12151   81 TSDRGLCGGFNSNIIKAAEELIKE--ADGKEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILDFL 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642 162 EGELDRLFVVFNKFENTMVQEPTIDQLLPLPKSDSEEMKRSHSWDYIYEPEPKPLLDALLVRYVESQVYQGVVENLACEQ 241
Cdd:cd12151  159 NGEIDEVYIIYNKFKSAISQEPVVEQLLPLDKEEEEEESEGSRSDYIFEPDPEEVLDALLPFYLASLLYRALLESLASEQ 238

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 515165642 242 AARMIAMKSATDNAGDIIDDLELVYNKARQAAITQELSEIVSGA 285
Cdd:cd12151  239 AARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
 
Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-288 3.04e-175

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 485.00  E-value: 3.04e-175
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642   1 MAGAKEIRNKIGSVKSTQKITKAMEMVAASKMRRSQDAMEATRPYAETMRKVIGHLANGSlEYKHPYLEEREAKRVGYII 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASAS-EYDHPLLVEREVKRVGYIV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642  81 VSTDRGLCGGLNINLFKKAMNDMKDWSEKGADVELAIVGSKATAFFNNSGAKVAAQVSGLGDRPSLEDLIGSVSVMLKKY 160
Cdd:PRK05621  80 VTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDAY 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642 161 DEGELDRLFVVFNKFENTMVQEPTIDQLLPLPKSDSEEmkrSHSWDYIYEPEPKPLLDALLVRYVESQVYQGVVENLACE 240
Cdd:PRK05621 160 DNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEE---ETSWDYEYEPDAEEILDALLPRYVESQIYQALLENKASE 236

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 515165642 241 QAARMIAMKSATDNAGDIIDDLELVYNKARQAAITQELSEIVSGAAAV 288
Cdd:PRK05621 237 QAARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-288 2.55e-166

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 462.31  E-value: 2.55e-166
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642   1 MAGAKEIRNKIGSVKSTQKITKAMEMVAASKMRRSQDAMEATRPYAETMRKVIGHLANGSLEYKHPYLEEREAKRVGYII 80
Cdd:COG0224    1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASPEYDHPLLEEREVKRVGLIV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642  81 VSTDRGLCGGLNINLFKKAMNDMKDWSEKGADVELAIVGSKATAFFNNSGAKVAAQVSGLGDRPSLEDLIGSVSVMLKKY 160
Cdd:COG0224   81 ITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLDAF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642 161 DEGELDRLFVVFNKFENTMVQEPTIDQLLPLPKSDSEEMKRSHSWDYIYEPEPKPLLDALLVRYVESQVYQGVVENLACE 240
Cdd:COG0224  161 LAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAEWETRADYIFEPSPEEILDALLPRYLESQIYQALLESAASE 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 515165642 241 QAARMIAMKSATDNAGDIIDDLELVYNKARQAAITQELSEIVSGAAAV 288
Cdd:COG0224  241 HAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
ATP-synt pfam00231
ATP synthase;
5-287 9.59e-146

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 410.38  E-value: 9.59e-146
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642    5 KEIRNKIGSVKSTQKITKAMEMVAASKMRRSQDAMEATRPYAETMRKVIGHLANGSLEYKHPYLEEREAKRVGYIIVSTD 84
Cdd:pfam00231   3 KEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASPEDSHPLLERREVKKVGLIVITSD 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642   85 RGLCGGLNINLFKKAMNDMKDWSEKGADVELAIVGSKATAFFNNSGAKVAAQVSG-LGDRPSLEDLIGSVSVMLKKYDEG 163
Cdd:pfam00231  83 RGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDYFKKRGYEVILEFTGsLGDKPTFEEAAEIADELLDAFLAG 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642  164 ELDRLFVVFNKFENTMVQEPTIDQLLPLPKSDSEEMKRSHsWDYIYEPEPKPLLDALLVRYVESQVYQGVVENLACEQAA 243
Cdd:pfam00231 163 EIDEVYLVYNRFVSAISQEPTVEQLLPLDPEEEEEEEESL-ADYEFEPSAEEVLDALLPRYLESQIYGALLESAASEQAA 241

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 515165642  244 RMIAMKSATDNAGDIIDDLELVYNKARQAAITQELSEIVSGAAA 287
Cdd:pfam00231 242 RMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-288 1.01e-139

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 395.12  E-value: 1.01e-139
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642    2 AGAKEIRNKIGSVKSTQKITKAMEMVAASKMRRSQDAMEATRPYAETMRKVIGHLANGSLEYKHPYLEEREAKRVGYIIV 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLLNVDHPLLKSREVKKVGILVI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642   82 STDRGLCGGLNINLFKKAMNDMKDWSEKGADVELAIVGSKATAFFNNSGAKVAAQVSGLGDRPSLEDLIGSVSVMLKKYD 161
Cdd:TIGR01146  81 TSDRGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLDAFD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642  162 EGELDRLFVVFNKFENTMVQEPTIDQLLPLPKSDSEEmKRSHSWDYIYEPEPKPLLDALLVRYVESQVYQGVVENLACEQ 241
Cdd:TIGR01146 161 AGEFDELYIVYNKFVSSISQEPTVKQLLPLSAQGPDE-GFKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLESAASEQ 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 515165642  242 AARMIAMKSATDNAGDIIDDLELVYNKARQAAITQELSEIVSGAAAV 288
Cdd:TIGR01146 240 AARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-285 1.47e-127

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 364.21  E-value: 1.47e-127
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642   2 AGAKEIRNKIGSVKSTQKITKAMEMVAASKMRRSQDAMEATRPYAETMRKVIGHLANGSLEYKHPYLEEREAKRVGYIIV 81
Cdd:cd12151    1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDEDPPLLEKREVKKVLLIVI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642  82 STDRGLCGGLNINLFKKAMNDMKDwsEKGADVELAIVGSKATAFFNNSGAKVAAQVSGLGDRPSLEDLIGSVSVMLKKYD 161
Cdd:cd12151   81 TSDRGLCGGFNSNIIKAAEELIKE--ADGKEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILDFL 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642 162 EGELDRLFVVFNKFENTMVQEPTIDQLLPLPKSDSEEMKRSHSWDYIYEPEPKPLLDALLVRYVESQVYQGVVENLACEQ 241
Cdd:cd12151  159 NGEIDEVYIIYNKFKSAISQEPVVEQLLPLDKEEEEEESEGSRSDYIFEPDPEEVLDALLPFYLASLLYRALLESLASEQ 238

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 515165642 242 AARMIAMKSATDNAGDIIDDLELVYNKARQAAITQELSEIVSGA 285
Cdd:cd12151  239 AARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
PRK14111 PRK14111
F0F1 ATP synthase subunit gamma; Provisional
 1-288 1.72e-102

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184515  Cd Length: 290  Bit Score: 300.94  E-value: 1.72e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642   1 MAGAKEIRNKIGSVKSTQKITKAMEMVAASKMRRSQDAMEATRPYAETMRKVIGHLA--NGSLEYKHPYLEEREA-KRVG 77
Cdd:PRK14111   1 MPSTREIRRRIRSVKNTAQITRAMEMVSASKMRRAQRNVLATRPYADRIRDVMGDLTarTVGAARVGPLLEKRPTvKRVA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642  78 YIIVSTDRGLCGGLNINLFKKAMNDMKDWSEKGADVELAIVGSKATAFFNNSGAKVAAQVSGLGDRPSLEDLIGSVSVML 157
Cdd:PRK14111  81 LILVTPDRGLAGSLNANVLRRAIRFITDERSMGRTVDVIAIGRKGRDFMVRTGQALVAEFTRLGDAPKLEAILPVATSAI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642 158 KKYDEGELDRLFVVFNKFENTMVQEPTIDQLLPLPKSDSEEMKRShswDYIYEPEPKPLLDALLVRYVESQVYQGVVENL 237
Cdd:PRK14111 161 NGFQSGKYDEVYVLYSEFINTLVQRPTIKQLLPIEPPEISTTTVV---DYTYEPSPEEVLRALLPRFVEVQLYQAVLESI 237

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 515165642 238 ACEQAARMIAMKSATDNAGDIIDDLELVYNKARQAAITQELSEIVSGAAAV 288
Cdd:PRK14111 238 ASEHSARMVAMRNATDNAKELVRDLTLTYNKARQAAITKEVSEIASGAAAL 288
PRK13423 PRK13423
F0F1 ATP synthase subunit gamma; Provisional
 1-288 3.78e-99

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237384  Cd Length: 288  Bit Score: 292.35  E-value: 3.78e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642   1 MAGAKEIRNKIGSVKSTQKITKAMEMVAASKMRRSQDAMEATRPYAETMRKVIGHLANGSLEYKHPYLEEREAKRVGYII 80
Cdd:PRK13423   1 MASLKDIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAARPYAAKLGEVLGSLAARAGEDAHPLLVPREVKKALLVV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642  81 VSTDRGLCGGLNINLFKKAMNDMKDWSEKGADVELAIVGSKATAFFNNSGAKVAAQVSGLGDRPSLEDLIGSVSVMLKKY 160
Cdd:PRK13423  81 VTSDRGLCGGFNSNLCKAAERFLKENKDEFEEISLTTVGRKGREFLKNRGLIIRKNYGGVVANLTYETAALLAQELIEGY 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642 161 DEGELDRLFVVFNKFENTMVQEPTIDQLLPLPKSDSEEmkRSHSWDYIYEPEPKPLLDALLVRYVESQVYQGVVENLACE 240
Cdd:PRK13423 161 LAGEYDEVYLVYNEFKSVMSQDITVQQLLPIDPPEAAD--DEYLPEYIYEPSRDALLAELLPKHVEVQIYRALLESVASE 238

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 515165642 241 QAARMIAMKSATDNAGDIIDDLELVYNKARQAAITQELSEIVSGAAAV 288
Cdd:PRK13423 239 HGARMTAMDSATKNATEMIGKLTLQYNRARQAAITTELMEIVSGAEAL 286
PRK13422 PRK13422
F0F1 ATP synthase subunit gamma; Provisional
 1-288 6.69e-88

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184046  Cd Length: 298  Bit Score: 264.22  E-value: 6.69e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642   1 MAGAKEIRNKIGSVKSTQKITKAMEMVAASKMRRSQDAMEATRPYAETMRKVIGHLANGSLEYKHPYLEEREAKRVGYII 80
Cdd:PRK13422   1 MSNAREIRSKVQSVKNTQKITGAMELVAASKMRGAIVKMNNVRPYVESANTIIKNVTAASIDYPNPYLFDRDVKRVGYIV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642  81 VSTDRGLCGGLNINLFKKAMNDMKDWSEKGADVELAIVGSKATAFF---NNSGAKVAAQVSGLGDRPSLEDLIGSVSVML 157
Cdd:PRK13422  81 TSTDRGLCGGLNINLFKHVLKEIKNNIEDRVGVDVCVIGSKAENFFaklKDVNIVATAHYNDKDKEGSIRAIGGAVKVML 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642 158 KKYDEGELDRLFVVFNKFENTMVQEPTIDQLLPLP--------KSDSEEMKRSHsWDYIYEPEPKPLLDALLVRYVESQV 229
Cdd:PRK13422 161 DKFTAGEIDRLYMSSNQFVSTIKQRPRLQTLLPIQdifsaeeiKANKEKATKGH-WDYIYERDIEEVLNALCIRYIEAQV 239

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 515165642 230 YQGVVENLACEQAARMIAMKSATDNAGDIIDDLELVYNKARQAAITQELSEIVSGAAAV 288
Cdd:PRK13422 240 RGAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298
PRK13424 PRK13424
F0F1 ATP synthase subunit gamma; Provisional
 1-287 1.80e-75

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172047  Cd Length: 291  Bit Score: 232.33  E-value: 1.80e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642   1 MAGAKEIRNKIGSVKSTQKITKAMEMVAASKMRRSQDAMEATRPYAETMRKVIGHLANGSLEYKHPYLEER-EAKRVGYI 79
Cdd:PRK13424   1 MPSLKDVKVKIAGVKKTKQITKAMNMVASAKLRGAQQRIERFRPYAEKFYDMLGDLASRADSSAHPLLEVReEIKTCGIV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642  80 IVSTDRGLCGGLNINLFKKAMNDMKDWSEKGADVELAIVGSKATAFFNNSGAKVaaqVSGLGDRPSLEDLIGSVSVMLK- 158
Cdd:PRK13424  81 LITSDRGLCGSFNANLINAALKLAKQKTAEGKTVKFYCVGKKGRDAIRKTDFEI---VTAYADQMTSFDFQLANSIGLEv 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642 159 --KYDEGELDRLFVVFNKFENTMVQEPTIDQLLPLPKSDSEEMKRSHSWDYIYEPEPKPLLDALLVRYVESQVYQGVVEN 236
Cdd:PRK13424 158 idGYLTGELDEVVLVYGEFVSMARQLPITLQILPIAPEEAEEEEAGASSEYIYEPSVEGLLAELLPRFIKVQIYRGLLDT 237

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 515165642 237 LACEQAARMIAMKSATDNAGDIIDDLELVYNKARQAAITQELSEIVSGAAA 287
Cdd:PRK13424 238 SASEHAARMTAMDNATRNCDDMIGSLTLLYNKTRQASITRELMDIVGGAEA 288
PRK13427 PRK13427
F0F1 ATP synthase subunit gamma; Provisional
 1-288 2.54e-74

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172049  Cd Length: 289  Bit Score: 229.06  E-value: 2.54e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642   1 MAGAKEIRNKIGSVKSTQKITKAMEMVAASKMRRSQDAMEATRPYAETMRKVIGHLANGSLEYKHPYLEEREA-KRVGYI 79
Cdd:PRK13427   1 MATPREIKKRINSVKNTRKITRTMEMVSTAKSKKATDRVNAAHPYANKIKELVSSLASLEGVVHSPYLRRPEKiRTVALL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642  80 IVSTDRGLCGGLNINLFKKAMNDMKDWSEKGADVELAIVGSKATAFFNNSGAKVAAQVSGLGDRPSLEDLIGSVSVMLKK 159
Cdd:PRK13427  81 IITANRGLCGGFNSNLNRMAKARIAELKKKGVNVELHIVGKKGISFFKFAGEKAEKTYTHIDDKSGYKEAEELANLFMER 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642 160 YDEGELDRLFVVFNKFENTMVQEPTIDQLLPL-PKSDSEEMKRSHswDYIYEPEPKPLLDALLVRYVESQVYQGVVENLA 238
Cdd:PRK13427 161 FANESVDAVEIASTVYYSAASQKPETTRVLPLePPTAAAEGSVQD--DVVYEPSPEAILESLLPLVVKTAFLKAILEANA 238

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 515165642 239 CEQAARMIAMKSATDNAGDIIDDLELVYNKARQAAITQELSEIVSGAAAV 288
Cdd:PRK13427 239 SEQIARRIAMKSATDAASEMIKLLTRGYNRVRQAKITQEISEIVGGADAL 288
PRK13426 PRK13426
F0F1 ATP synthase subunit gamma; Provisional
 1-287 4.15e-69

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237385  Cd Length: 291  Bit Score: 215.80  E-value: 4.15e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642   1 MAGAKEIRNKIGSVKSTQKITKAMEMVAASKMRRSQDAMEATRPYAETMRKVIGHLANGSLEYKHPYLEEREAKRVGYII 80
Cdd:PRK13426   1 MASLKEIKTRIASVQSTRKITSAMKMVASAKLHKAQGAIENMLPYQRKLNHILTNFLSADLDVESPFTVERPVKRVAIVV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642  81 VSTDRGLCGGLNINLFKKAMNDMKDWSEKGAD-VELAIVGSKATAFFNNSGAKVAAQVSGLGDRPSLEDLIGSVSVMLKK 159
Cdd:PRK13426  81 FSSNTSLCGGFNANIIKLLLQTIGEYRTLGQDnILIYPVGKKIEEAVKKLGFKVQGDYQTLADKPSYEEAAALAMRLMEL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642 160 YDEGELDRLFVVFNKFENTMVQEPTIDQLLPLPKSD--SEEMKRSHSWDYIYEPEPKPLLDALLVRYVESQVYQGVVENL 237
Cdd:PRK13426 161 FLEGEIDKVELIYHHFKSMGVQVLTRETYLPIDLSQekNAEHAGGVANDYIIEPSADTVLNDLIPKLLSLKIYTALLDSN 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 515165642 238 ACEQAARMIAMKSATDNAGDIIDDLELVYNKARQAAITQELSEIVSGAAA 287
Cdd:PRK13426 241 ASEHAARMVAMQIATDNANELLQELTLQYNKSRQQAITNELLDIVGGSMA 290
PRK13425 PRK13425
F0F1 ATP synthase subunit gamma; Provisional
 1-288 2.70e-68

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 139564  Cd Length: 291  Bit Score: 213.91  E-value: 2.70e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642   1 MAGAKEIRNKIGSVKSTQKITKAMEMVAASKMRRSQDAMEATRPYAETMRKVIGHLANGSLEYKHPYLEER-EAKRVGYI 79
Cdd:PRK13425   1 MPTLKDIRVRIKGVKSTQQVTKAMKMVAAAKLRRAQERAIMARPYAAKLKEMLGSLSAKVDTSLNPLLSPRsEVNKVLVI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642  80 IVSTDRGLCGGLNINLFKKAM----NDMKDWSEKGAdVELAIVGSKATAFFNNSGAKVAAQVSGLG---DRPSLEDLIGS 152
Cdd:PRK13425  81 LITSDRGLCGAFNTNIIKLAQkvihEDYAALHAKGG-VSMICAGTRGFDFFRKRGYNIVKGYPGVFqnlDFSVAKEIAET 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642 153 VSVMlkkYDEGELDRLFVVFNKFENTMVQEPTIDQLLPLPKSDSEEMKRShswDYIYEPEPKPLLDALLVRYVESQVYQG 232
Cdd:PRK13425 160 ASGM---YLRGEVDKVVVVYNEFKSVLAPNLKSEVLLPITPEKPGAEGGS---DYIYEPSPAAIIDELVPKHLNTQVWRM 233

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 515165642 233 VVENLACEQAARMIAMKSATDNAGDIIDDLELVYNKARQAAITQELSEIVSGAAAV 288
Cdd:PRK13425 234 MLESNAAEQAARMTAMDSATENAKELLRTLNISYNRARQAAITKELSEIVAGADAL 289
PRK14110 PRK14110
F0F1 ATP synthase subunit gamma; Provisional
 5-288 9.98e-68

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184514  Cd Length: 291  Bit Score: 212.32  E-value: 9.98e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642   5 KEIRNKIGSVKSTQKITKAMEMVAASKMRRSQDAMEATRPYAETMRKVIGHLANGSLEYKHPYLEEREAKRVGYIIVSTD 84
Cdd:PRK14110   7 RDIKRKIQGIKNTRRITNAMKVVSAAKLRKAQELLYASRPYSEKLYELISDLAAHIDRESHPLLERREEKNVDLVIITAD 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642  85 RGLCGGLNINLFKKAMNDMKDWSEKGADVELAIVGSKATAFFNNSGAKVAAQVSGLGDRPSLEDLIGSVSVMLK-KYDEG 163
Cdd:PRK14110  87 RGLAGAFNSNVIKTAERLIQEKQSEGVRVNLILIGRKGVQYFSKRGYNIIKSYEDVFRKEINFSVVKEVGGILAsRYIEE 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515165642 164 ELDRLFVVFNKFENTMVQEPTIDQLLPLPKSDSEEmKRSHSWDYIYEPEPKPLLDALLVRYVESQVYQGVVENLACEQAA 243
Cdd:PRK14110 167 ETDAVYLINNEMITRATYKPKVRKFLPFEVEAQEK-KLDELSVYNIEVSEEEFLDKLLQLYLNYQLYRALVESNAAEHFA 245

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 515165642 244 RMIAMKSATDNAGDIIDDLELVYNKARQAAITQELSEIVSGAAAV 288
Cdd:PRK14110 246 RMVAMDNATRNAGELIRKWTLIFNKARQEAITTELIDIVNAAEAM 290
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH