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Conserved domains on  [gi|515494731|ref|WP_016927985|]
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hexitol phosphatase HxpB [Serratia marcescens]

Protein Classification

hexitol phosphatase HxpB( domain architecture ID 10793483)

hexitol phosphatase HxpB is a sugar-phosphate phosphohydrolase that catalyzes the dephosphorylation of D-mannitol 1-phosphate and D-sorbitol 6-phosphate; also catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate (2dGlu6P)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK10826 PRK10826
hexitol phosphatase HxpB;
1-221 4.53e-148

hexitol phosphatase HxpB;


:

Pssm-ID: 236770 [Multi-domain]  Cd Length: 222  Bit Score: 410.88  E-value: 4.53e-148
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   1 MAYSQRIETAIFDMDGLLIDSEPLWLQAELDIFGALGLDLSDRHKLPDTLGLRIDLVVKMWYQAMPWQGVSLDEVSARII 80
Cdd:PRK10826   1 MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRREELPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRII 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  81 ERAIELVHETRPLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAER 160
Cdd:PRK10826  81 ARVISLIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAK 160
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 515494731 161 LGSDPLRCITLEDSFNGMIATKAARMRSIVIPAAEYRHDPRWALADHKLETLEQLTAAHFA 221
Cdd:PRK10826 161 LGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTAADLL 221
 
Name Accession Description Interval E-value
PRK10826 PRK10826
hexitol phosphatase HxpB;
1-221 4.53e-148

hexitol phosphatase HxpB;


Pssm-ID: 236770 [Multi-domain]  Cd Length: 222  Bit Score: 410.88  E-value: 4.53e-148
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   1 MAYSQRIETAIFDMDGLLIDSEPLWLQAELDIFGALGLDLSDRHKLPDTLGLRIDLVVKMWYQAMPWQGVSLDEVSARII 80
Cdd:PRK10826   1 MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRREELPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRII 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  81 ERAIELVHETRPLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAER 160
Cdd:PRK10826  81 ARVISLIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAK 160
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 515494731 161 LGSDPLRCITLEDSFNGMIATKAARMRSIVIPAAEYRHDPRWALADHKLETLEQLTAAHFA 221
Cdd:PRK10826 161 LGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTAADLL 221
YcjU COG0637
Beta-phosphoglucomutase, HAD superfamily [Carbohydrate transport and metabolism];
6-215 3.20e-64

Beta-phosphoglucomutase, HAD superfamily [Carbohydrate transport and metabolism];


Pssm-ID: 440402 [Multi-domain]  Cd Length: 208  Bit Score: 197.74  E-value: 3.20e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   6 RIETAIFDMDGLLIDSEPLWLQAELDIFGALGLDLSDRHkLPDTLGLRIDLVVKMWYQAMPWQgVSLDEVSARIIERAIE 85
Cdd:COG0637    1 MIKAVIFDMDGTLVDSEPLHARAWREAFAELGIDLTEEE-YRRLMGRSREDILRYLLEEYGLD-LPEEELAARKEELYRE 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  86 LVHETR-PLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAERLGSD 164
Cdd:COG0637   79 LLAEEGlPLIPGVVELLEALKEAGIKIAVATSSPRENAEAVLEAAGLLDYFDVIVTGDDVARGKPDPDIYLLAAERLGVD 158
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 515494731 165 PLRCITLEDSFNGMIATKAARMRSIVIPaAEYRHDPRWALADHKLETLEQL 215
Cdd:COG0637  159 PEECVVFEDSPAGIRAAKAAGMRVVGVP-DGGTAEEELAGADLVVDDLAEL 208
HAD_BPGM-like cd07505
beta-phosphoglucomutase-like family of the haloacid dehalogenase-like (HAD) hydrolase ...
10-192 1.57e-37

beta-phosphoglucomutase-like family of the haloacid dehalogenase-like (HAD) hydrolase superfamily; This family represents the beta-phosphoglucomutase-like family of the haloacid dehalogenase-like (HAD) hydrolase superfamily. Family members include Lactococcus lactis beta-PGM, a mutase which catalyzes the interconversion of beta-D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), Saccharomyces cerevisiae phosphatases GPP1 and GPP2 that dephosphorylate DL-glycerol-3-phosphate and DOG1 and DOG2 that dephosphorylate 2-deoxyglucose-6-phosphate, and Escherichia coli 6-phosphogluconate phosphatase YieH. It belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319808 [Multi-domain]  Cd Length: 143  Bit Score: 127.73  E-value: 1.57e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  10 AIFDMDGLLIDSEPLWLQAELDIfgalgldlsdrhklpdtlglridlvvkMWYQAMpwqgvsldevsariieRAIELVHE 89
Cdd:cd07505    2 VIFDMDGVLIDTEPLHRQAWQLL---------------------------ERKNAL----------------LLELIASE 38
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  90 TRPLLPGVQQALELCRRQGLNIGLASAS-PLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAERLGSDPLRC 168
Cdd:cd07505   39 GLKLKPGVVELLDALKAAGIPVAVATSSsRRNVELLLLELGLLRGYFDVIVSGDDVERGKPAPDIYLLAAERLGVDPERC 118
                        170       180
                 ....*....|....*....|....
gi 515494731 169 ITLEDSFNGMIATKAARMRSIVIP 192
Cdd:cd07505  119 LVFEDSLAGIEAAKAAGMTVVAVP 142
PGMB-YQAB-SF TIGR02009
beta-phosphoglucomutase family hydrolase; This subfamily model groups together three clades: ...
7-191 1.71e-29

beta-phosphoglucomutase family hydrolase; This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).


Pssm-ID: 213673 [Multi-domain]  Cd Length: 185  Bit Score: 108.20  E-value: 1.71e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731    7 IETAIFDMDGLLIDSEPLWLQAELDIFGALGLDLSDRH-------KLPDTLGLRIDLVVKmwyqampwqGVSLDEVsARI 79
Cdd:TIGR02009   1 YKAVIFDMDGVITDTAPLHAQAWKHIAAKYGISFDKQYneslkglSREDILRAILKLRGD---------GLSLEEI-HQL 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   80 IERAIELVHETRPL-----LPGVQQALELCRRQGLNIGLASASplHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVY 154
Cdd:TIGR02009  71 AERKNELYRELLRLtgvavLPGIRNLLKRLKAKGIAVGLGSSS--KNAPRILAKLGLRDYFDAIVDASEVKNGKPHPETF 148
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 515494731  155 LIAAERLGSDPLRCITLEDSFNGMIATKAARMRSIVI 191
Cdd:TIGR02009 149 LLAAELLGVPPNECIVFEDALAGVQAARAAGMFAVAV 185
HAD_2 pfam13419
Haloacid dehalogenase-like hydrolase;
11-191 7.25e-28

Haloacid dehalogenase-like hydrolase;


Pssm-ID: 404323 [Multi-domain]  Cd Length: 178  Bit Score: 103.82  E-value: 7.25e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   11 IFDMDGLLIDSEPLWLQAELDIFGALGLDLSDRHKLPDTLGLriDLVVKMWYQAMPWQgvsLDEVSARIIERAIELVHET 90
Cdd:pfam13419   2 IFDFDGTLLDTEELIIKSFNYLLEEFGYGELSEEEILKFIGL--PLREIFRYLGVSED---EEEKIEFYLRKYNEELHDK 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   91 RP-LLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAERLGSDPLRCI 169
Cdd:pfam13419  77 LVkPYPGIKELLEELKEQGYKLGIVTSKSRENVEEFLKQLGLEDYFDVIVGGDDVEGKKPDPDPILKALEQLGLKPEEVI 156
                         170       180
                  ....*....|....*....|..
gi 515494731  170 TLEDSFNGMIATKAARMRSIVI 191
Cdd:pfam13419 157 YVGDSPRDIEAAKNAGIKVIAV 178
 
Name Accession Description Interval E-value
PRK10826 PRK10826
hexitol phosphatase HxpB;
1-221 4.53e-148

hexitol phosphatase HxpB;


Pssm-ID: 236770 [Multi-domain]  Cd Length: 222  Bit Score: 410.88  E-value: 4.53e-148
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   1 MAYSQRIETAIFDMDGLLIDSEPLWLQAELDIFGALGLDLSDRHKLPDTLGLRIDLVVKMWYQAMPWQGVSLDEVSARII 80
Cdd:PRK10826   1 MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRREELPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRII 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  81 ERAIELVHETRPLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAER 160
Cdd:PRK10826  81 ARVISLIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAK 160
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 515494731 161 LGSDPLRCITLEDSFNGMIATKAARMRSIVIPAAEYRHDPRWALADHKLETLEQLTAAHFA 221
Cdd:PRK10826 161 LGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTAADLL 221
YcjU COG0637
Beta-phosphoglucomutase, HAD superfamily [Carbohydrate transport and metabolism];
6-215 3.20e-64

Beta-phosphoglucomutase, HAD superfamily [Carbohydrate transport and metabolism];


Pssm-ID: 440402 [Multi-domain]  Cd Length: 208  Bit Score: 197.74  E-value: 3.20e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   6 RIETAIFDMDGLLIDSEPLWLQAELDIFGALGLDLSDRHkLPDTLGLRIDLVVKMWYQAMPWQgVSLDEVSARIIERAIE 85
Cdd:COG0637    1 MIKAVIFDMDGTLVDSEPLHARAWREAFAELGIDLTEEE-YRRLMGRSREDILRYLLEEYGLD-LPEEELAARKEELYRE 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  86 LVHETR-PLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAERLGSD 164
Cdd:COG0637   79 LLAEEGlPLIPGVVELLEALKEAGIKIAVATSSPRENAEAVLEAAGLLDYFDVIVTGDDVARGKPDPDIYLLAAERLGVD 158
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 515494731 165 PLRCITLEDSFNGMIATKAARMRSIVIPaAEYRHDPRWALADHKLETLEQL 215
Cdd:COG0637  159 PEECVVFEDSPAGIRAAKAAGMRVVGVP-DGGTAEEELAGADLVVDDLAEL 208
HAD_BPGM-like cd07505
beta-phosphoglucomutase-like family of the haloacid dehalogenase-like (HAD) hydrolase ...
10-192 1.57e-37

beta-phosphoglucomutase-like family of the haloacid dehalogenase-like (HAD) hydrolase superfamily; This family represents the beta-phosphoglucomutase-like family of the haloacid dehalogenase-like (HAD) hydrolase superfamily. Family members include Lactococcus lactis beta-PGM, a mutase which catalyzes the interconversion of beta-D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), Saccharomyces cerevisiae phosphatases GPP1 and GPP2 that dephosphorylate DL-glycerol-3-phosphate and DOG1 and DOG2 that dephosphorylate 2-deoxyglucose-6-phosphate, and Escherichia coli 6-phosphogluconate phosphatase YieH. It belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319808 [Multi-domain]  Cd Length: 143  Bit Score: 127.73  E-value: 1.57e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  10 AIFDMDGLLIDSEPLWLQAELDIfgalgldlsdrhklpdtlglridlvvkMWYQAMpwqgvsldevsariieRAIELVHE 89
Cdd:cd07505    2 VIFDMDGVLIDTEPLHRQAWQLL---------------------------ERKNAL----------------LLELIASE 38
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  90 TRPLLPGVQQALELCRRQGLNIGLASAS-PLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAERLGSDPLRC 168
Cdd:cd07505   39 GLKLKPGVVELLDALKAAGIPVAVATSSsRRNVELLLLELGLLRGYFDVIVSGDDVERGKPAPDIYLLAAERLGVDPERC 118
                        170       180
                 ....*....|....*....|....
gi 515494731 169 ITLEDSFNGMIATKAARMRSIVIP 192
Cdd:cd07505  119 LVFEDSLAGIEAAKAAGMTVVAVP 142
HAD_BPGM-like cd16423
uncharacterized subfamily of beta-phosphoglucomutase-like family, similar to uncharacterized ...
11-192 1.15e-35

uncharacterized subfamily of beta-phosphoglucomutase-like family, similar to uncharacterized Bacillus subtilis YhcW; This subfamily includes the uncharacterized Bacillus subtilis YhcW. It belongs to the beta-phosphoglucomutase-like family whose other members include Lactococcus lactis beta-PGM, a mutase which catalyzes the interconversion of beta-D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), Saccharomyces cerevisiae phosphatases GPP1 and GPP2 that dephosphorylate DL-glycerol-3-phosphate and DOG1 and DOG2 that dephosphorylate 2-deoxyglucose-6-phosphate, and Escherichia coli 6-phosphogluconate phosphatase YieH. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319859 [Multi-domain]  Cd Length: 169  Bit Score: 123.90  E-value: 1.15e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  11 IFDMDGLLIDSEPLWLQAeldifgalgldlsdrhklpdtlglridlvvkmwyqampWQGVSLDEVSARIIERAIELvhET 90
Cdd:cd16423    3 IFDFDGVIVDTEPLWYEA--------------------------------------WQELLNERRNELIKRQFSEK--TD 42
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  91 RPLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAERLGSDPLRCIT 170
Cdd:cd16423   43 LPPIEGVKELLEFLKEKGIKLAVASSSPRRWIEPHLERLGLLDYFEVIVTGDDVEKSKPDPDLYLEAAERLGVNPEECVV 122
                        170       180
                 ....*....|....*....|..
gi 515494731 171 LEDSFNGMIATKAARMRSIVIP 192
Cdd:cd16423  123 IEDSRNGVLAAKAAGMKCVGVP 144
Gph COG0546
Phosphoglycolate phosphatase, HAD superfamily [Energy production and conversion];
7-218 3.63e-33

Phosphoglycolate phosphatase, HAD superfamily [Energy production and conversion];


Pssm-ID: 440312 [Multi-domain]  Cd Length: 214  Bit Score: 118.49  E-value: 3.63e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   7 IETAIFDMDGLLIDSEPLWLQAELDIFGALGLDLSDRHKLPDTLGLRIDLVVKMWYQAMPWQGVslDEVSARIIERAIEL 86
Cdd:COG0546    1 IKLVLFDLDGTLVDSAPDIAAALNEALAELGLPPLDLEELRALIGLGLRELLRRLLGEDPDEEL--EELLARFRELYEEE 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  87 VHETRPLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAERLGSDPL 166
Cdd:COG0546   79 LLDETRLFPGVRELLEALKARGIKLAVVTNKPREFAERLLEALGLDDYFDAIVGGDDVPPAKPKPEPLLEALERLGLDPE 158
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 515494731 167 RCITLEDSFNGMIATKAARMRSI-VIPAAEYRHDPRWALADHKLETLEQLTAA 218
Cdd:COG0546  159 EVLMVGDSPHDIEAARAAGVPFIgVTWGYGSAEELEAAGADYVIDSLAELLAL 211
PGMB-YQAB-SF TIGR02009
beta-phosphoglucomutase family hydrolase; This subfamily model groups together three clades: ...
7-191 1.71e-29

beta-phosphoglucomutase family hydrolase; This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).


Pssm-ID: 213673 [Multi-domain]  Cd Length: 185  Bit Score: 108.20  E-value: 1.71e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731    7 IETAIFDMDGLLIDSEPLWLQAELDIFGALGLDLSDRH-------KLPDTLGLRIDLVVKmwyqampwqGVSLDEVsARI 79
Cdd:TIGR02009   1 YKAVIFDMDGVITDTAPLHAQAWKHIAAKYGISFDKQYneslkglSREDILRAILKLRGD---------GLSLEEI-HQL 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   80 IERAIELVHETRPL-----LPGVQQALELCRRQGLNIGLASASplHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVY 154
Cdd:TIGR02009  71 AERKNELYRELLRLtgvavLPGIRNLLKRLKAKGIAVGLGSSS--KNAPRILAKLGLRDYFDAIVDASEVKNGKPHPETF 148
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 515494731  155 LIAAERLGSDPLRCITLEDSFNGMIATKAARMRSIVI 191
Cdd:TIGR02009 149 LLAAELLGVPPNECIVFEDALAGVQAARAAGMFAVAV 185
HAD_2 pfam13419
Haloacid dehalogenase-like hydrolase;
11-191 7.25e-28

Haloacid dehalogenase-like hydrolase;


Pssm-ID: 404323 [Multi-domain]  Cd Length: 178  Bit Score: 103.82  E-value: 7.25e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   11 IFDMDGLLIDSEPLWLQAELDIFGALGLDLSDRHKLPDTLGLriDLVVKMWYQAMPWQgvsLDEVSARIIERAIELVHET 90
Cdd:pfam13419   2 IFDFDGTLLDTEELIIKSFNYLLEEFGYGELSEEEILKFIGL--PLREIFRYLGVSED---EEEKIEFYLRKYNEELHDK 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   91 RP-LLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAERLGSDPLRCI 169
Cdd:pfam13419  77 LVkPYPGIKELLEELKEQGYKLGIVTSKSRENVEEFLKQLGLEDYFDVIVGGDDVEGKKPDPDPILKALEQLGLKPEEVI 156
                         170       180
                  ....*....|....*....|..
gi 515494731  170 TLEDSFNGMIATKAARMRSIVI 191
Cdd:pfam13419 157 YVGDSPRDIEAAKNAGIKVIAV 178
Hydrolase pfam00702
haloacid dehalogenase-like hydrolase; This family is structurally different from the alpha ...
7-184 1.41e-25

haloacid dehalogenase-like hydrolase; This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Swiss:P24069. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteriztic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria.


Pssm-ID: 459910 [Multi-domain]  Cd Length: 191  Bit Score: 98.43  E-value: 1.41e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731    7 IETAIFDMDGLLIDSEPLWLQA------ELDIFGALGLDLSDRHKLPDTLGLRIDLVVKMWYQAMPWQGVSLDEVSARII 80
Cdd:pfam00702   1 IKAVVFDLDGTLTDGEPVVTEAiaelasEHPLAKAIVAAAEDLPIPVEDFTARLLLGKRDWLEELDILRGLVETLEAEGL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   81 E------RAIELVHETRPLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVY 154
Cdd:pfam00702  81 TvvlvelLGVIALADELKLYPGAAEALKALKERGIKVAILTGDNPEAAEALLRLLGLDDYFDVVISGDDVGVGKPKPEIY 160
                         170       180       190
                  ....*....|....*....|....*....|
gi 515494731  155 LIAAERLGSDPLRCITLEDSFNGMIATKAA 184
Cdd:pfam00702 161 LAALERLGVKPEEVLMVGDGVNDIPAAKAA 190
HAD-SF-IA-v3 TIGR01509
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; ...
9-191 1.79e-24

haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms: (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created with the knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly related HAD subfamilies caused by an overly broad single model. [Unknown function, Enzymes of unknown specificity]


Pssm-ID: 273662 [Multi-domain]  Cd Length: 178  Bit Score: 95.18  E-value: 1.79e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731    9 TAIFDMDGLLIDSEPLWLQaELDIFGALGLDLSDRHKLPDTLGLRIDLVVKMWYQAMpwQGVSLDEVSARIIERAIELVh 88
Cdd:TIGR01509   1 AILFDLDGVLVDTEFAIAK-LINREELGLVPDELGVSAVGRLELALRRFKAQYGRTI--SPEDAQLLYKQLFYEQIEEE- 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   89 ETRPLLPGVQQALELCRRQGLNIGLASASPLHMQRqVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAERLGSDPLRC 168
Cdd:TIGR01509  77 AKLKPLPGVRALLEALRARGKKLALLTNSPRAHKL-VLALLGLRDLFDVVIDSSDVGLGKPDPDIYLQALKALGLEPSEC 155
                         170       180
                  ....*....|....*....|...
gi 515494731  169 ITLEDSFNGMIATKAARMRSIVI 191
Cdd:TIGR01509 156 VFVDDSPAGIEAAKAAGMHTVGV 178
YigB COG1011
FMN and 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB, HAD superfamily ...
7-217 2.03e-22

FMN and 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB, HAD superfamily (riboflavin biosynthesis) [Coenzyme transport and metabolism];


Pssm-ID: 440635 [Multi-domain]  Cd Length: 220  Bit Score: 90.86  E-value: 2.03e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   7 IETAIFDMDGLLIDSEPLWLQAELDIFGALGLDLSdrhklPDTLGLRIDLVVKMWYQAMPWQGVSLDEV----------- 75
Cdd:COG1011    1 IKAVLFDLDGTLLDFDPVIAEALRALAERLGLLDE-----AEELAEAYRAIEYALWRRYERGEITFAELlrrlleelgld 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  76 -SARIIERAIELVHETRPLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVY 154
Cdd:COG1011   76 lAEELAEAFLAALPELVEPYPDALELLEALKARGYRLALLTNGSAELQEAKLRRLGLDDLFDAVVSSEEVGVRKPDPEIF 155
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 515494731 155 LIAAERLGSDPLRCITLEDSFNG-MIATKAARMRSIVIPAAEYRHDPRwALADHKLETLEQLTA 217
Cdd:COG1011  156 ELALERLGVPPEEALFVGDSPETdVAGARAAGMRTVWVNRSGEPAPAE-PRPDYVISDLAELLE 218
HAD_CbbY-like cd07528
subfamily of beta-phosphoglucomutase-like family, similar to Rhodobacter sphaeroides ...
11-192 3.54e-20

subfamily of beta-phosphoglucomutase-like family, similar to Rhodobacter sphaeroides xylulose-1,5-bisphosphate phosphatase CbbY; This family includes Rhodobacter sphaeroides and Arabidopsis thaliana xylulose-1,5-bisphosphate phosphatase CbbY which convert xylulose-1,5-bisphosphate (a potent inhibitor of Ribulose-1,5-bisphosphate carboxylase/oxygenase, Rubisco), to the non-inhibitory compound xylulose-5-phosphate. It belongs to the beta-phosphoglucomutase-like family whose other members include Lactococcus lactis beta-PGM, a mutase which catalyzes the interconversion of beta-D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), Saccharomyces cerevisiae phosphatases GPP1 and GPP2 that dephosphorylate DL-glycerol-3-phosphate and DOG1 and DOG2 that dephosphorylate 2-deoxyglucose-6-phosphate, and Escherichia coli 6-phosphogluconate phosphatase YieH. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319830 [Multi-domain]  Cd Length: 199  Bit Score: 84.35  E-value: 3.54e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  11 IFDMDGLLIDSEPLWLQAELDIFGAL-GLDLSDRHKLPDTLgLRI--DLVVKMWYQAMPWQGVSLDEVSARII------- 80
Cdd:cd07528    3 IFDVDGTLAETEELHRRAFNNAFFAErGLDWYWDRELYGEL-LRVggGKERIAAYFEKVGWPESAPKDLKELIadlhkak 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  81 -ERAIELVHETR-PLLPGVQQALELCRRQGLNIGLAS-ASPLHMQRQVLKMFDLEGY--FDQLVSAEYLPYSKPHPEVYL 155
Cdd:cd07528   82 tERYAELIAAGLlPLRPGVARLIDEAKAAGVRLAIATtTSPANVDALLSALLGPERRaiFDAIAAGDDVAEKKPDPDIYL 161
                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 515494731 156 IAAERLGSDPLRCITLEDSFNGMIATKAARMRSIVIP 192
Cdd:cd07528  162 LALERLGVSPSDCLAIEDSAIGLQAAKAAGLPCIVTP 198
PRK13222 PRK13222
N-acetylmuramic acid 6-phosphate phosphatase MupP;
5-219 2.85e-19

N-acetylmuramic acid 6-phosphate phosphatase MupP;


Pssm-ID: 237310 [Multi-domain]  Cd Length: 226  Bit Score: 82.55  E-value: 2.85e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   5 QRIETAIFDMDGLLIDSEPlwlqaelDIFGALGLDLSDRHKLPDTLGLRIDLV----VKMWYQAMPWQGVSLDEVS-ARI 79
Cdd:PRK13222   4 MDIRAVAFDLDGTLVDSAP-------DLAAAVNAALAALGLPPAGEERVRTWVgngaDVLVERALTWAGREPDEELlEKL 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  80 IERAIELVHETRP----LLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYL 155
Cdd:PRK13222  77 RELFDRHYAENVAggsrLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLL 156
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 515494731 156 IAAERLGSDPLRCITLEDSFNGMIATKAARMRSIV--------IPAAEYRHDprwALADHKLETLEQLTAAH 219
Cdd:PRK13222 157 LACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGvtygynygEPIALSEPD---VVIDHFAELLPLLGLAL 225
HAD_BPGM cd02598
beta-phosphoglucomutase, similar to Lactococcus lactis beta-phosphoglucomutase (beta-PGM); ...
62-195 3.44e-19

beta-phosphoglucomutase, similar to Lactococcus lactis beta-phosphoglucomutase (beta-PGM); Lactococcus lactis beta-PGM catalyzes the interconversion of beta-D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), forming beta-D-glucose 1,6-(bis)phosphate as an intermediate. In the forward G6P-forming direction, this reaction links polysaccharide phosphorolysis to glycolysis, in the reverse direction, the reaction provides G1P for the biosynthesis of exo-polysaccharides. This subfamily belongs to the beta-phosphoglucomutase-like family whose other members include Saccharomyces cerevisiae phosphatases GPP1 and GPP2 that dephosphorylate DL-glycerol-3-phosphate and DOG1 and DOG2 that dephosphorylate 2-deoxyglucose-6-phosphate, and Escherichia coli 6-phosphogluconate phosphatase YieH. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319788 [Multi-domain]  Cd Length: 174  Bit Score: 81.18  E-value: 3.44e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  62 YQAMPWQGVS-LDEVSARIIERAIELVHE--TRPLLPGVQQALELCRRQGLNIGLASAS---PLhmqrqVLKMFDLEGYF 135
Cdd:cd02598   16 YHYRAWKKLAdKEELAARKNRIYVELIEEltPVDVLPGIASLLVDLKAKGIKIALASASknaPK-----ILEKLGLAEYF 90
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731 136 DQLVSAEYLPYSKPHPEVYLIAAERLGSDPLRCITLEDSFNGMIATKAARMRSIVIPAAE 195
Cdd:cd02598   91 DAIVDGAVLAKGKPDPDIFLAAAEGLGLNPKDCIGVEDAQAGIRAIKAAGFLVVGVGREE 150
HAD_AtGPP-like cd07529
subfamily of beta-phosphoglucomutase-like family, similar to Arabidopsis thaliana Gpp1 and ...
11-192 3.58e-19

subfamily of beta-phosphoglucomutase-like family, similar to Arabidopsis thaliana Gpp1 and Gpp2; This subfamily includes Arabidopsis thaliana AtGpp1 and AtGpp2, and Drosophila GS1-like protein (Dmel\Gs1l) of unknown function. AtGpp1 and AtGpp2 are constitutively expressed in all the Arabidopsis tissues and unaffected under abiotic stress. Overexpression of AtGpp2 in transgenic Arabidopsis plants increases the specific DL-glycerol-3-phosphatase activity and improves the plants tolerance to salt, osmotic and oxidative stress. It belongs to the beta-phosphoglucomutase-like family whose other members include Lactococcus lactis beta-PGM, a mutase which catalyzes the interconversion of beta-D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), Saccharomyces cerevisiae phosphatases GPP1 and GPP2 that dephosphorylate DL-glycerol-3-phosphate and DOG1 and DOG2 that dephosphorylate 2-deoxyglucose-6-phosphate, and Escherichia coli 6-phosphogluconate phosphatase YieH. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319831 [Multi-domain]  Cd Length: 192  Bit Score: 81.62  E-value: 3.58e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  11 IFDMDGLLIDSEPLWLQAE---LDIFGAlGLDLSDRHKLpdtLGLRID----LVVKmWYQAmpwqGVSLDEVSARIIERA 83
Cdd:cd07529    5 IFDMDGLLLDTERIYTETTqeiLARYGK-TYTWDVKAKM---MGRPASeaarIIVD-ELKL----PMSLEEEFDEQQEAL 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  84 IELVHETRPLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMF-DLEGYFDQLVSA---EYLPYSKPHPEVYLIAAE 159
Cdd:cd07529   76 AELFMGTAKLMPGAERLLRHLHAHNIPIALATSSCTRHFKLKTSRHkELFSLFHHVVTGddpEVKGRGKPAPDIFLVAAK 155
                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 515494731 160 RLG---SDPLRCITLEDSFNGMIATKAARMRSIVIP 192
Cdd:cd07529  156 RFNeppKDPSKCLVFEDSPNGVKAAKAAGMQVVMVP 191
HAD_like cd07533
uncharacterized family of the haloacid dehalogenase-like (HAD) hydrolase superfamily, similar ...
10-215 9.98e-18

uncharacterized family of the haloacid dehalogenase-like (HAD) hydrolase superfamily, similar to Parvibaculum lavamentivorans HAD-superfamily hydrolase, subfamily IA, variant 1; This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319835 [Multi-domain]  Cd Length: 207  Bit Score: 78.21  E-value: 9.98e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  10 AIFDMDGLLIDSEPLWLQAELDIFGALGLDLSDRHKLPDTLGLRIDLVVKmwyQAMPWQGVSLDEVSARIIERAIELV-- 87
Cdd:cd07533    2 VIFDWDGTLADSQHNIVAAMTAAFADLGLPVPSAAEVRSIIGLSLDEAIA---RLLPMATPALVAVAERYKEAFDILRll 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  88 --HETrPLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPySKPHPEVYLIAAERLGSDP 165
Cdd:cd07533   79 peHAE-PLFPGVREALDALAAQGVLLAVATGKSRRGLDRVLEQHGLGGYFDATRTADDTP-SKPHPEMLREILAELGVDP 156
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 515494731 166 LRCITLEDSFNGMIATKAARMRSI-VIPAAEYRHDPRWALADHKLETLEQL 215
Cdd:cd07533  157 SRAVMVGDTAYDMQMAANAGAHAVgVAWGYHSLEDLRSAGADAVVDHFSEL 207
HAD_PGPase cd07512
haloacid dehalogenase-like superfamily phosphoglycolate phosphatase, similar to Rhodobacter ...
9-200 2.67e-17

haloacid dehalogenase-like superfamily phosphoglycolate phosphatase, similar to Rhodobacter sphaeroides CbbZ; Phosphoglycolate phosphatase catalyzes the dephosphorylation of phosphoglycolate; its activity requires divalent cations, especially Mg++. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319815 [Multi-domain]  Cd Length: 214  Bit Score: 76.97  E-value: 2.67e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   9 TAIFDMDGLLIDSEPLWLQAELDIFGALGLDLSDRHKLPDTLGlriDLVVKMWYQAMPWQGVSLDE-VSARIIERAIElV 87
Cdd:cd07512    1 AVIFDLDGTLIDSAPDLHAALNAVLAAEGLAPLSLAEVRSFVG---HGAPALIRRAFAAAGEDLDGpLHDALLARFLD-H 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  88 HETRP-----LLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAERLG 162
Cdd:cd07512   77 YEADPpgltrPYPGVIEALERLRAAGWRLAICTNKPEAPARALLSALGLADLFAAVVGGDTLPQRKPDPAPLRAAIRRLG 156
                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 515494731 163 SDPLRCITLEDSFNGMIATKAARMRSIVIPAAeYRHDP 200
Cdd:cd07512  157 GDVSRALMVGDSETDAATARAAGVPFVLVTFG-YRHAP 193
HAD_BPGM_like cd07526
subfamily of beta-phosphoglucomutase-like family, similar to Escherichia coli ...
11-187 7.45e-17

subfamily of beta-phosphoglucomutase-like family, similar to Escherichia coli 6-phosphogluconate phosphatase YieH; This subfamily includes Escherichia coli YieH/HAD3 an 6-phosphogluconate phosphatase, which can hydrolyzed purines and pyrimidines as secondary substrates. It belongs to the beta-phosphoglucomutase-like family whose other members include Lactococcus lactis beta-PGM, a mutase which catalyzes the interconversion of beta-D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), Saccharomyces cerevisiae phosphatases GPP1 and GPP2 that dephosphorylate DL-glycerol-3-phosphate, and DOG1 and DOG2 that dephosphorylate 2-deoxyglucose-6-phosphate. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319828 [Multi-domain]  Cd Length: 141  Bit Score: 73.89  E-value: 7.45e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  11 IFDMDGLLIDSEPLWLQAELDIFGALGLdlsdrhklpdtlglridlvvkmwyqampwqgvsldevsariiERAIELVHET 90
Cdd:cd07526    4 IFDCDGVLVDSEVIAARVLVEVLAELGA------------------------------------------RVLAAFEAEL 41
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  91 RPLlPGVQQALelcRRQGLNIGLASASPLHMQRQVLKMFDLEGYFD-QLVSAEYLPYSKPHPEVYLIAAERLGSDPLRCI 169
Cdd:cd07526   42 QPI-PGAAAAL---SALTLPFCVASNSSRERLTHSLGLAGLLAYFEgRIFSASDVGRGKPAPDLFLHAAAQMGVAPERCL 117
                        170
                 ....*....|....*...
gi 515494731 170 TLEDSFNGMIATKAARMR 187
Cdd:cd07526  118 VIEDSPTGVRAALAAGMT 135
PLN02919 PLN02919
haloacid dehalogenase-like hydrolase family protein
11-191 2.05e-15

haloacid dehalogenase-like hydrolase family protein


Pssm-ID: 215497 [Multi-domain]  Cd Length: 1057  Bit Score: 74.50  E-value: 2.05e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   11 IFDMDGLLIDSEPLWLQAELDIFGALGLDLSDRHKLP-------DTLGlridlVVKMWYQAmpwQGVSLDEVSARIIERA 83
Cdd:PLN02919   79 LFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFVPfmgtgeaNFLG-----GVASVKGV---KGFDPDAAKKRFFEIY 150
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   84 IELVHETRPLLpGVQQALEL---CRRQGLNIGLASAS--------------PLHMqrqvlkmfdlegyFDQLVSAEYLPY 146
Cdd:PLN02919  151 LEKYAKPNSGI-GFPGALELitqCKNKGLKVAVASSAdrikvdanlaaaglPLSM-------------FDAIVSADAFEN 216
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 515494731  147 SKPHPEVYLIAAERLGSDPLRCITLEDSFNGMIATKAARMRSIVI 191
Cdd:PLN02919  217 LKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAV 261
PLN03243 PLN03243
haloacid dehalogenase-like hydrolase; Provisional
93-191 2.69e-15

haloacid dehalogenase-like hydrolase; Provisional


Pssm-ID: 215644 [Multi-domain]  Cd Length: 260  Bit Score: 72.37  E-value: 2.69e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  93 LLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAERLGSDPLRCITLE 172
Cdd:PLN03243 110 LRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVFG 189
                         90
                 ....*....|....*....
gi 515494731 173 DSFNGMIATKAARMRSIVI 191
Cdd:PLN03243 190 NSNSSVEAAHDGCMKCVAV 208
HAD_PGPase cd16417
Escherichia coli Gph phosphoglycolate phosphatase and related proteins; belongs to the ...
11-192 5.00e-15

Escherichia coli Gph phosphoglycolate phosphatase and related proteins; belongs to the haloacid dehalogenase-like superfamily; Phosphoglycolate phosphatase (PGP; EC 3.1.3.18) catalyzes the conversion of 2-phosphoglycolate into glycolate and phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase (C-Cl bond hydrolysis), azetidine hydrolase (C-N bond hydrolysis); phosphonoacetaldehyde hydrolase (C-P bond hydrolysis), phosphoserine phosphatase and phosphomannomutase (CO-P bond hydrolysis), P-type ATPases (PO-P bond hydrolysis) and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319854 [Multi-domain]  Cd Length: 212  Bit Score: 70.73  E-value: 5.00e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  11 IFDMDGLLIDSEP-LWLQAELdIFGALGLDLSDRHKLPDTLGLRIDLVVKmwyQAMPWQGVSLDEVSARIIERAI----- 84
Cdd:cd16417    3 AFDLDGTLVDSAPdLAEAANA-MLAALGLPPLPEETVRTWIGNGADVLVE---RALTGAREAEPDEELFKEARALfdrhy 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  85 -ELVHETRPLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAERLGS 163
Cdd:cd16417   79 aETLSVHSHLYPGVKEGLAALKAQGYPLACVTNKPERFVAPLLEALGISDYFSLVLGGDSLPEKKPDPAPLLHACEKLGI 158
                        170       180
                 ....*....|....*....|....*....
gi 515494731 164 DPLRCITLEDSFNGMIATKAARMRSIVIP 192
Cdd:cd16417  159 APAQMLMVGDSRNDILAARAAGCPSVGLT 187
CTE7 TIGR02253
HAD superfamily (subfamily IA) hydrolase, TIGR02253; This family of sequences from archaea and ...
7-215 4.87e-14

HAD superfamily (subfamily IA) hydrolase, TIGR02253; This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).


Pssm-ID: 274057 [Multi-domain]  Cd Length: 221  Bit Score: 68.20  E-value: 4.87e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731    7 IETAIFDMDGLLIDSEPLWLQA-----ELDIFGALGLDLSDRH--------KLPDTLGLRID-LVVKMWYQAMPwqgvsl 72
Cdd:TIGR02253   2 IKAIFFDLDDTLIDTSGLAEKArrnaiEVLIEAGLNVDFEEAYeellklikEYGSNYPTHFDyLIRRLWEEYNP------ 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   73 devsaRIIERAIELVHETR----PLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSK 148
Cdd:TIGR02253  76 -----KLVAAFVYAYHKLKfaylRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEK 150
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  149 PHPEVYLIAAERLGSDPLRCITLEDSFNGMI-ATKAARMRSIVIPAAEY--RHDPRWALADHKLETLEQL 215
Cdd:TIGR02253 151 PHPKIFYAALKRLGVKPEEAVMVGDRLDKDIkGAKNAGMKTVWINQGKSskMEDDVYPYPDYEISSLREL 220
HAD_PPase cd02616
pyrophosphatase similar to Bacillus subtilis PpaX; This family includes Bacillus subtilis PpaX ...
7-184 6.61e-14

pyrophosphatase similar to Bacillus subtilis PpaX; This family includes Bacillus subtilis PpaX which hydrolyzes pyrophosphate formed during serine-46-phosphorylated HPr (P-Ser-HPr) dephosphorylation by the bifunctional enzyme HPr kinase/phosphorylase. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319797 [Multi-domain]  Cd Length: 207  Bit Score: 67.69  E-value: 6.61e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   7 IETAIFDMDGLLIDSEPLWLQAELDIFGALGLDlsdrhklpdtlGLRIDLVVKMWyqampwqGVSLDEVSARIIE-RAIE 85
Cdd:cd02616    1 ITTILFDLDGTLIDTNELIIKSFNHTLKEYGLE-----------GYTREEVLPFI-------GPPLRETFEKIDPdKLED 62
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  86 LVHETRP-----------LLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVY 154
Cdd:cd02616   63 MVEEFRKyyrehnddltkEYPGVYETLARLKSQGIKLGVVTTKLRETALKGLKLLGLDKYFDVIVGGDDVTHHKPDPEPV 142
                        170       180       190
                 ....*....|....*....|....*....|
gi 515494731 155 LIAAERLGSDPLRCITLEDSFNGMIATKAA 184
Cdd:cd02616  143 LKALELLGAEPEEALMVGDSPHDILAGKNA 172
HAD_ScGPP-like cd07527
subfamily of beta-phosphoglucomutase-like family, similar to Saccharomyces cerevisiae ...
10-216 7.35e-14

subfamily of beta-phosphoglucomutase-like family, similar to Saccharomyces cerevisiae DL-glycerol-3-phosphate phosphatase (GPP1p/ Rhr2p and GPP2p/HOR2p) and 2-deoxyglucose-6-phosphate phosphatase (DOG1p and DOG2p); This subfamily includes Saccharomyces cerevisiae DL-glycerol-3-phosphate phosphatase (GPP1p/ Rhr2p and GPP2p/HOR2p) and 2-deoxyglucose-6-phosphate phosphatase (DOG1p and DOG2p). GPP1p and GPP2p are involved in glycerol biosynthesis, GPP1 is induced in response to both anaerobic and hyperosmotic stress, GPP2 is induced in response to hyperosmotic or oxidative stress, and during diauxic shift; overexpression of DOG1 or DOG2 confers 2-deoxyglucose resistance. These belong to the beta-phosphoglucomutase-like family whose other members include Lactococcus lactis beta-PGM, a mutase which catalyzes the interconversion of beta-D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), and Escherichia coli 6-phosphogluconate phosphatase YieH. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319829 [Multi-domain]  Cd Length: 205  Bit Score: 67.37  E-value: 7.35e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  10 AIFDMDGLLIDSEPLWLQAELDIFGALGLDLsdRHKLPDTLGLR-IDLVVKMWYQAMPWQGVsldevsARIIERAIELVH 88
Cdd:cd07527    2 LLFDMDGTLVDSTPAVERAWHKWAKEHGVDP--EEVLKVSHGRRaIDVIRKLAPDDADIELV------LALETEEPESYP 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  89 ETRPLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLeGYFDQLVSAEYLPYSKPHPEVYLIAAERLGSDPLRC 168
Cdd:cd07527   74 EGVIAIPGAVDLLASLPAAGDRWAIVTSGTRALAEARLEAAGL-PHPEVLVTADDVKNGKPDPEPYLLGAKLLGLDPSDC 152
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 515494731 169 ITLEDSFNGMIATKAARMRSIVIPAAEYRHDPRWALADHKLETLEQLT 216
Cdd:cd07527  153 VVFEDAPAGIKAGKAAGARVVAVNTSHDLEQLEAAGADLVVEDLSDIS 200
PRK13288 PRK13288
pyrophosphatase PpaX; Provisional
6-184 3.08e-13

pyrophosphatase PpaX; Provisional


Pssm-ID: 237336 [Multi-domain]  Cd Length: 214  Bit Score: 66.21  E-value: 3.08e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   6 RIETAIFDMDGLLIDSEPLWLQAELDIFgalgldlsdRHKLPDTLGlRIDLVvkmwyqamPWQGVSLDEVSARIIE-RAI 84
Cdd:PRK13288   2 KINTVLFDLDGTLINTNELIISSFLHTL---------KTYYPNQYK-REDVL--------PFIGPSLHDTFSKIDEsKVE 63
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  85 ELV-------HETRPLL----PGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEV 153
Cdd:PRK13288  64 EMIttyrefnHEHHDELvteyETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEP 143
                        170       180       190
                 ....*....|....*....|....*....|.
gi 515494731 154 YLIAAERLGSDPLRCITLEDSFNGMIATKAA 184
Cdd:PRK13288 144 VLKALELLGAKPEEALMVGDNHHDILAGKNA 174
PLN02779 PLN02779
haloacid dehalogenase-like hydrolase family protein
4-192 5.36e-13

haloacid dehalogenase-like hydrolase family protein


Pssm-ID: 215416 [Multi-domain]  Cd Length: 286  Bit Score: 66.27  E-value: 5.36e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   4 SQRIETAIFDMDGLLIDSEP-LWLQAELDIFGALGL-----DLSDRHKLPDTLGLRidlvVKM-WY-QAMPWQGVSL--- 72
Cdd:PLN02779  37 SALPEALLFDCDGVLVETERdGHRVAFNDAFKEFGLrpvewDVELYDELLNIGGGK----ERMtWYfNENGWPTSTIeka 112
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  73 -----------DEVSARIIERAIELVHE-TRPLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQL-- 138
Cdd:PLN02779 113 pkdeeerkelvDSLHDRKTELFKELIESgALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLdv 192
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 515494731 139 VSAEYLPYSKPHPEVYLIAAERLGSDPLRCITLEDSFNGMIATKAARMRSIVIP 192
Cdd:PLN02779 193 FAGDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTK 246
HAD_like cd01427
Haloacid dehalogenase-like hydrolases; The haloacid dehalogenase-like (HAD) superfamily ...
97-191 9.14e-13

Haloacid dehalogenase-like hydrolases; The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others. This superfamily includes a variety of enzymes that catalyze the cleavage of substrate C-Cl, P-C, and P-OP bonds via nucleophilic substitution pathways. All of which use a nucleophilic aspartate in their phosphoryl transfer reaction. They catalyze nucleophilic substitution reactions at phosphorus or carbon centers, using a conserved Asp carboxylate in covalent catalysis. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319763 [Multi-domain]  Cd Length: 106  Bit Score: 62.41  E-value: 9.14e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  97 VQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAERLGSDPLRCITLEDSFN 176
Cdd:cd01427   12 AVELLKRLRAAGIKLAIVTNRSREALRALLEKLGLGDLFDGIIGSDGGGTPKPKPKPLLLLLLKLGVDPEEVLFVGDSEN 91
                         90
                 ....*....|....*
gi 515494731 177 GMIATKAARMRSIVI 191
Cdd:cd01427   92 DIEAARAAGGRTVAV 106
PLN02940 PLN02940
riboflavin kinase
5-193 9.75e-13

riboflavin kinase


Pssm-ID: 178528 [Multi-domain]  Cd Length: 382  Bit Score: 66.40  E-value: 9.75e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   5 QRIETAIFDMDGLLIDSEPLW---LQAELDIFGALgLDLSDRHKLPDTLGLRIDLVVKMWYQaMPWqgvSLDEVSARIIE 81
Cdd:PLN02940   9 KLVSHVILDLDGTLLNTDGIVsdvLKAFLVKYGKQ-WDGREAQKIVGKTPLEAAATVVEDYG-LPC---STDEFNSEITP 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  82 RAIELVHETRPLlPGVQQALELCRRQGLNIGLASASP-LHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAER 160
Cdd:PLN02940  84 LLSEQWCNIKAL-PGANRLIKHLKSHGVPMALASNSPrANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKR 162
                        170       180       190
                 ....*....|....*....|....*....|...
gi 515494731 161 LGSDPLRCITLEDSFNGMIATKAARMRSIVIPA 193
Cdd:PLN02940 163 LNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPS 195
PRK10725 PRK10725
fructose-1-phosphate/6-phosphogluconate phosphatase;
11-186 1.29e-12

fructose-1-phosphate/6-phosphogluconate phosphatase;


Pssm-ID: 182679 [Multi-domain]  Cd Length: 188  Bit Score: 63.94  E-value: 1.29e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  11 IFDMDGLLIDSEPLWLQAELDIFGALGL--DLSDRHKLPDTLGLRIDLVVKMWYQAmpwqgvSLD-EVSARIIERAIE-- 85
Cdd:PRK10725   9 IFDMDGTILDTEPTHRKAWREVLGRYGLqfDEQAMVALNGSPTWRIAQAIIELNQA------DLDpHALAREKTEAVKsm 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  86 LVHETRPLlPGVQQALELCRRQGLNIGLASASPlhMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAERLGSDP 165
Cdd:PRK10725  83 LLDSVEPL-PLIEVVKAWHGRRPMAVGTGSESA--IAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQP 159
                        170       180
                 ....*....|....*....|.
gi 515494731 166 LRCITLEDSFNGMIATKAARM 186
Cdd:PRK10725 160 TQCVVFEDADFGIQAARAAGM 180
HAD-SF-IA-v1 TIGR01549
haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or ...
9-185 4.35e-11

haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms: (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model. [Unknown function, Enzymes of unknown specificity]


Pssm-ID: 273686 [Multi-domain]  Cd Length: 164  Bit Score: 59.33  E-value: 4.35e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731    9 TAIFDMDGLLIDSEPLWLQAELDIFGALGLDLSDRHKLPDTLGLRIDLvvkMWYQAMPWQGvsldevsaRIIERAIELVH 88
Cdd:TIGR01549   1 AILFDIDGTLVDIKFAIRRAFPQTFEEFGLDPASFKALKQAGGLAEEE---WYRIATSALE--------ELQGRFWSEYD 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   89 ETRPLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDqLVSAEYLPYSKPHPEVYLIAAERLGSDPlRC 168
Cdd:TIGR01549  70 AEEAYIRGAADLLARLKSAGIKLGIISNGSLRAQKLLLRLFGLGDYFE-LILVSDEPGSKPEPEIFLAALESLGVPP-EV 147
                         170
                  ....*....|....*..
gi 515494731  169 ITLEDSFNGMIATKAAR 185
Cdd:TIGR01549 148 LHVGDNLNDIEGARNAG 164
PRK13226 PRK13226
phosphoglycolate phosphatase; Provisional
9-190 5.14e-10

phosphoglycolate phosphatase; Provisional


Pssm-ID: 237311 [Multi-domain]  Cd Length: 229  Bit Score: 57.17  E-value: 5.14e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   9 TAIFDMDGLLIDSEPlwlqaelDIFGALGLDLSDRHKLPDTLGLrIDLVVKMWYQAMpwQGVSLDEVSA--------RII 80
Cdd:PRK13226  14 AVLFDLDGTLLDSAP-------DMLATVNAMLAARGRAPITLAQ-LRPVVSKGARAM--LAVAFPELDAaardalipEFL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  81 ERAIELVHETRPLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAER 160
Cdd:PRK13226  84 QRYEALIGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAER 163
                        170       180       190
                 ....*....|....*....|....*....|
gi 515494731 161 LGSDPLRCITLEDSFNGMIATKAARMRSIV 190
Cdd:PRK13226 164 IGVAPTDCVYVGDDERDILAARAAGMPSVA 193
HAD_Neu5Ac-Pase_like cd04305
human N-acetylneuraminate-9-phosphate phosphatase, Escherichia coli house-cleaning phosphatase ...
93-176 7.65e-10

human N-acetylneuraminate-9-phosphate phosphatase, Escherichia coli house-cleaning phosphatase YjjG, and related phosphatases; N-acetylneuraminate-9- phosphatase (Neu5Ac-9-Pase; E.C. 3.1.3.29) catalyzes the dephosphorylation of N-acylneuraminate 9-phosphate during the synthesis of N-acetylneuraminate; Escherichia coli nucleotide phosphatase YjjG has a broad pyrimidine nucleotide activity spectrum and functions as an in vivo house-cleaning phosphatase for noncanonical pyrimidine nucleotides. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319800 [Multi-domain]  Cd Length: 109  Bit Score: 54.47  E-value: 7.65e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  93 LLPGVQQALELCRrQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAERLGSDPLRCITLE 172
Cdd:cd04305   10 LLPGAKELLEELK-KGYKLGIITNGPTEVQWEKLEQLGIHKYFDHIVISEEVGVQKPNPEIFDYALNQLGVKPEETLMVG 88

                 ....
gi 515494731 173 DSFN 176
Cdd:cd04305   89 DSLE 92
HAD_sEH-N_like cd02603
N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX ...
7-199 1.97e-09

N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive; This family includes the N-terminal phosphatase domain of human soluble epoxide hydrolase (sEH). sEH is a bifunctional enzyme with two distinct enzyme activities, the C-terminal domain has epoxide hydrolysis activity and the N-terminal domain (Ntermphos), which belongs to this family, has lipid phosphatase activity. The latter prefers mono-phosphate esters, and lysophosphatidic acids (LPAs) are the best natural substrates found to date. In addition this family includes Gallus gallus sEH and Xenopus sEH which appears to lack phosphatase activity, and Escherichia coli YihX/HAD4 which selectively hydrolyzes alpha-Glucose-1-P, phosphatase, has significant phosphatase activity against pyridoxal phosphate, and has low beta phosphoglucomutase activity. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319790 [Multi-domain]  Cd Length: 195  Bit Score: 55.04  E-value: 1.97e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   7 IETAIFDMDGLLIDSEPLWLQAELdiFGALGLDLSDRHKLPDTLGLRIDLVVKMWYQAMPWQGVSlDEVSARIIERAI-E 85
Cdd:cd02603    1 IRAVLFDFGGVLIDPDPAAAVARF--EALTGEPSEFVLDTEGLAGAFLELERGRITEEEFWEELR-EELGRPLSAELFeE 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  86 LVHETRPLLPGVQQALELCRRQGLNIGLAS-ASPLHMQRQVLKMFDLEGYFD-QLVSAEyLPYSKPHPEVYLIAAERLGS 163
Cdd:cd02603   78 LVLAAVDPNPEMLDLLEALRAKGYKVYLLSnTWPDHFKFQLELLPRRGDLFDgVVESCR-LGVRKPDPEIYQLALERLGV 156
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 515494731 164 DPLRCITLEDsfngMIA-TKAAR---MRSI-VIPAAEYRHD 199
Cdd:cd02603  157 KPEEVLFIDD----REEnVEAARalgIHAIlVTDAEDALRE 193
PLN02811 PLN02811
hydrolase
14-213 5.67e-09

hydrolase


Pssm-ID: 178407 [Multi-domain]  Cd Length: 220  Bit Score: 54.38  E-value: 5.67e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  14 MDGLLIDSEPLWLQAELDIFGALG--LDLSDRHKLpdtLGLRIDLVVKMWYQAMpwqGVSlDEVSAR--IIERAIEL--V 87
Cdd:PLN02811   1 MDGLLLDTEKFYTEVQEKILARYGktFDWSLKAKM---MGKKAIEAARIFVEES---GLS-DSLSPEdfLVEREAMLqdL 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  88 HETRPLLPGVQQALELCRRQGLNIGLASASplHMQRQVLK------MFDLEGYF----DQLVSAeylpySKPHPEVYLIA 157
Cdd:PLN02811  74 FPTSDLMPGAERLVRHLHAKGIPIAIATGS--HKRHFDLKtqrhgeLFSLMHHVvtgdDPEVKQ-----GKPAPDIFLAA 146
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 515494731 158 AERLGS---DPLRCITLEDSFNGMIATKAARMRSIVIPaaeyrhDPRWAL-----ADHKLETLE 213
Cdd:PLN02811 147 ARRFEDgpvDPGKVLVFEDAPSGVEAAKNAGMSVVMVP------DPRLDKsyckgADQVLSSLL 204
PRK13223 PRK13223
phosphoglycolate phosphatase; Provisional
11-189 9.23e-08

phosphoglycolate phosphatase; Provisional


Pssm-ID: 171912 [Multi-domain]  Cd Length: 272  Bit Score: 51.40  E-value: 9.23e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  11 IFDMDGLLIDSEPLWLQAELDIFGALGLDLSDRHKLPDTLGLRIDLVVKmwyQAMPwQGVSLDEVSARIIERAIELV--- 87
Cdd:PRK13223  17 MFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLVR---RALA-GSIDHDGVDDELAEQALALFmea 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  88 ----HETRPLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAERLGS 163
Cdd:PRK13223  93 yadsHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGV 172
                        170       180
                 ....*....|....*....|....*.
gi 515494731 164 DPLRCITLEDSFNGMIATKAARMRSI 189
Cdd:PRK13223 173 PPSQSLFVGDSRSDVLAAKAAGVQCV 198
PRK10563 PRK10563
6-phosphogluconate phosphatase; Provisional
6-215 1.16e-07

6-phosphogluconate phosphatase; Provisional


Pssm-ID: 182552 [Multi-domain]  Cd Length: 221  Bit Score: 50.46  E-value: 1.16e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   6 RIETAIFDMDGLLIDSEPLWLQAELDIFGALGLDLSDRHKLPDTLGLR----IDLVVKMwyqampwQGVSLD-------- 73
Cdd:PRK10563   3 QIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVFKRFKGVKlyeiIDIISKE-------HGVTLAkaelepvy 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  74 --EVsARIIERAIELVHETRPLLPGVQqaLELCrrqglnigLASASPLHMQRQVLKMFDLEGYF-DQLVSAEYLPYSKPH 150
Cdd:PRK10563  76 raEV-ARLFDSELEPIAGANALLESIT--VPMC--------VVSNGPVSKMQHSLGKTGMLHYFpDKLFSGYDIQRWKPD 144
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 515494731 151 PEVYLIAAERLGSDPLRCITLEDSFNGMIATKAARMrsiviPAAEYRHDPRWALADHKLET----LEQL 215
Cdd:PRK10563 145 PALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGM-----EVFYFCADPHNKPIDHPLVTtftdLAQL 208
PRK11587 PRK11587
putative phosphatase; Provisional
138-216 1.67e-07

putative phosphatase; Provisional


Pssm-ID: 183215 [Multi-domain]  Cd Length: 218  Bit Score: 49.99  E-value: 1.67e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 515494731 138 LVSAEYLPYSKPHPEVYLIAAERLGSDPLRCITLEDSFNGMIATKAARMRSIVIPAAEyrHDPRWALADHKLETLEQLT 216
Cdd:PRK11587 128 FVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPA--DTPRLDEVDLVLHSLEQLT 204
HAD_dREG-2_like cd16415
uncharacterized family of the haloacid dehalogenase-like superfamily, similar to ...
97-191 1.68e-07

uncharacterized family of the haloacid dehalogenase-like superfamily, similar to uncharacterized Drosophila melanogaster rhythmically expressed gene 2 protein and human haloacid dehalogenase-like hydrolase domain-containing protein 3; The haloacid dehalogenase-like (HAD) hydrolases are a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members include 2-L-haloalkanoic acid dehalogenase (C-Cl bond hydrolysis), azetidine hydrolase (C-N bond hydrolysis); phosphonoacetaldehyde hydrolase (C-P bond hydrolysis), phosphoserine phosphatase and phosphomannomutase (CO-P bond hydrolysis), P-type ATPases (PO-P bond hydrolysis) and many others. Members are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319852 [Multi-domain]  Cd Length: 128  Bit Score: 48.44  E-value: 1.68e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  97 VQQALELCRRQGLNIGLAS-ASPLhmQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAERLGSDPLRCITLEDSF 175
Cdd:cd16415   12 AVETLKDLKEKGLKLAVVSnFDRR--LRELLEALGLDDYFDFVVFSYEVGYEKPDPRIFQKALERLGVSPEEALHVGDDL 89
                         90
                 ....*....|....*..
gi 515494731 176 -NGMIATKAARMRSIVI 191
Cdd:cd16415   90 kNDYLGARAVGWHALLV 106
HAD_L2-DEX cd02588
L-2-haloacid dehalogenase; L-2-Haloacid dehalogenase catalyzes the hydrolytic dehalogenation ...
69-165 1.85e-07

L-2-haloacid dehalogenase; L-2-Haloacid dehalogenase catalyzes the hydrolytic dehalogenation of L-2-haloacids to produce the corresponding D-2-hydroxyacids with an inversion of the C2-configuration. 2-haloacid dehalogenases are of interest for their potential to degrade recalcitrant halogenated environmental pollutants and their use in the synthesis of industrial chemicals. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319787 [Multi-domain]  Cd Length: 216  Bit Score: 49.96  E-value: 1.85e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  69 GVSLDEVS-ARIIERAIELvhetrPLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYS 147
Cdd:cd02588   72 GLELDESDlDELGDAYLRL-----PPFPDVVAGLRRLREAGYRLAILSNGSPDLIEDVVANAGLRDLFDAVLSAEDVRAY 146
                         90
                 ....*....|....*...
gi 515494731 148 KPHPEVYLIAAERLGSDP 165
Cdd:cd02588  147 KPAPAVYELAAERLGVPP 164
HAD_type_II TIGR01428
2-haloalkanoic acid dehalogenase, type II; Catalyzes the hydrolytic dehalogenation of small ...
7-165 1.53e-06

2-haloalkanoic acid dehalogenase, type II; Catalyzes the hydrolytic dehalogenation of small L-2-haloalkanoic acids to yield the corresponding D-2-hydroxyalkanoic acids. Belongs to the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), class (subfamily) I. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.


Pssm-ID: 130495 [Multi-domain]  Cd Length: 198  Bit Score: 46.95  E-value: 1.53e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731    7 IETAIFDMDGLLIDSEPLWLQAElDIFGALGLDLSD---RHKLPDTlglriDLVVKMwYQAMPWQGVSLD---------- 73
Cdd:TIGR01428   1 IKALVFDVYGTLFDVHSVAERAA-ELYGGRGEALSQlwrQKQLEYS-----WLRTLM-GPYKDFWDLTREalryllgrlg 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   74 -EVSARIIERAIELVHETRPLlPGVQQALELCRRQGLNI-GLASASPLHMQRqVLKMFDLEGYFDQLVSAEYLPYSKPHP 151
Cdd:TIGR01428  74 lEDDESAADRLAEAYLRLPPH-PDVPAGLRALKERGYRLaILSNGSPAMLKS-LVKHAGLDDPFDAVLSADAVRAYKPAP 151
                         170
                  ....*....|....
gi 515494731  152 EVYLIAAERLGSDP 165
Cdd:TIGR01428 152 QVYQLALEALGVPP 165
PLN02575 PLN02575
haloacid dehalogenase-like hydrolase
111-191 1.80e-06

haloacid dehalogenase-like hydrolase


Pssm-ID: 215313 [Multi-domain]  Cd Length: 381  Bit Score: 47.55  E-value: 1.80e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731 111 IGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEVYLIAAERLGSDPLRCITLEDSFNGMIATKAARMRSIV 190
Cdd:PLN02575 235 MALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVA 314

                 .
gi 515494731 191 I 191
Cdd:PLN02575 315 V 315
HAD_PHN cd02586
Phosphonoacetaldehyde hydrolase (phosphonatase); similar to Bacillus cereus phosphonatase; ...
7-189 3.93e-06

Phosphonoacetaldehyde hydrolase (phosphonatase); similar to Bacillus cereus phosphonatase; Degradation of the ubiquitous natural phosphonate 2-aminoethylphosphonate (AEP) into useable forms of nitrogen, carbon, and phosphorus is a two-step metabolic pathway. The first step, catalyzed by AEP transaminase, involves the transfer of NH3 from AEP to pyruvate, yielding phosphonoacetaldehyde (P-Ald) and alanine. In the second step, phosphonatase catalyzes the hydrolytic P-C bond cleavage of P-Ald to form orthophosphate and acetaldehyde. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319785 [Multi-domain]  Cd Length: 242  Bit Score: 46.14  E-value: 3.93e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   7 IETAIFDMDGLLIDS---EPLwlQAELDIFGALGLDLS-DRHKLPdtLGL-RIDLVVKMwyQAMP-----WQGV------ 70
Cdd:cd02586    1 IEAVIFDWAGTTVDYgsfAPV--NAFVEAFAQRGVQITlEEARKP--MGLlKIDHIRAL--LEMPrvaeaWRAVfgrlpt 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  71 --SLDEVSARIIERAIELVHETRPLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYF-DQLVSAEYLPYS 147
Cdd:cd02586   75 eaDVDALYEEFEPILIASLAEYSSPIPGVLEVIAKLRARGIKIGSTTGYTREMMDIVLPEAAAQGYRpDSLVTPDDVPAG 154
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 515494731 148 KPHPEVYLIAAERLGSDPLR-CITLEDSFNGMIATKAARMRSI 189
Cdd:cd02586  155 RPYPWMCYKNAIELGVYDVAaVVKVGDTVPDIKEGLNAGMWTV 197
HAD_5NT cd02604
haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to Saccharomyces cerevisiae Phm8p ...
116-191 2.38e-05

haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to Saccharomyces cerevisiae Phm8p and Sdt1p; This family includes Saccharomyces cerevisiae Phm8p (phosphate metabolism protein 8) and Sdt1p (Suppressor of disruption of TFIIS). Phm8p participates in the ribose salvage pathway, it catalyzes the dephosphorylation of nucleotide monophosphates to nucleosides, its preferred substrates are nucleotide monophosphates AMP, GMP, CMP, and UMP. Phm8p is also a lysophosphatidic acid phosphatase, dephosphorylating lysophosphatidic acids (LPAs) to monoacylglycerol in response to phosphate starvation. Sdt1p is a pyrimidine and pyridine-specific 5'-nucleotidase; it is an NMN/NaMN 5'-nucleotidases involved in the production of nicotinamide riboside and nicotinic acid riboside, and is a pyrimidine 5'-nucleotidase with high specificity for UMP and CMP. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319791 [Multi-domain]  Cd Length: 182  Bit Score: 43.39  E-value: 2.38e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 515494731 116 ASPLHMQRqVLKMFDLEGYFDQLVSAEYL-PYSKPHPEVYLIAAERLGSDPLRCITLEDSFNGMIATKAARMRSIVI 191
Cdd:cd02604  105 ASKNHAIR-VLKRLGLADLFDGIFDIEYAgPDPKPHPAAFEKAIREAGLDPKRAAFFDDSIRNLLAAKALGMKTVLV 180
PRK13478 PRK13478
phosphonoacetaldehyde hydrolase; Provisional
6-189 1.47e-04

phosphonoacetaldehyde hydrolase; Provisional


Pssm-ID: 184075 [Multi-domain]  Cd Length: 267  Bit Score: 41.77  E-value: 1.47e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   6 RIETAIFDMDGLLIDS---EPLwlQAELDIFGALGLDLS-DRHKLPdtLGL-RIDLVVKMWyqAMP-----WQGVS---- 71
Cdd:PRK13478   3 KIQAVIFDWAGTTVDFgsfAPT--QAFVEAFAQFGVEITlEEARGP--MGLgKWDHIRALL--KMPrvaarWQAVFgrlp 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  72 ----LDEVSARIIERAIELVHETRPLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYF-DQLVSAEYLPY 146
Cdd:PRK13478  77 teadVDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRpDHVVTTDDVPA 156
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 515494731 147 SKPHPEVYLIAAERLG-SDPLRCITLEDSFNGMIATKAARMRSI 189
Cdd:PRK13478 157 GRPYPWMALKNAIELGvYDVAACVKVDDTVPGIEEGLNAGMWTV 200
PLN02770 PLN02770
haloacid dehalogenase-like hydrolase family protein
7-186 3.13e-04

haloacid dehalogenase-like hydrolase family protein


Pssm-ID: 215413 [Multi-domain]  Cd Length: 248  Bit Score: 40.59  E-value: 3.13e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   7 IETAIFDMDGLLIDSEPLWLQA------ELDIFGALGLD-------LSDRHKLPDTLGLRIDLVVKmwyqampwqGVSLD 73
Cdd:PLN02770  22 LEAVLFDVDGTLCDSDPLHYYAfremlqEINFNGGVPITeeffvenIAGKHNEDIALGLFPDDLER---------GLKFT 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  74 EVSARIIERaieLVHETRPLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEYLPYSKPHPEV 153
Cdd:PLN02770  93 DDKEALFRK---LASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDP 169
                        170       180       190
                 ....*....|....*....|....*....|...
gi 515494731 154 YLIAAERLGSDPLRCITLEDSFNGMIATKAARM 186
Cdd:PLN02770 170 YLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGM 202
HAD_5NT cd04302
haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065; ...
9-215 3.21e-04

haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065; 5'-nucleotidases dephosphorylate nucleoside 5'-monophosphates to nucleosides and inorganic phosphate. Purified Pseudomonas aeruginosa PA0065 displayed high activity toward 5'-UMP and 5'-IMP, significant activity against 5'-XMP and 5'-TMP, and low activity against 5'-CMP. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.


Pssm-ID: 319798 [Multi-domain]  Cd Length: 209  Bit Score: 40.27  E-value: 3.21e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   9 TAIFDMDGLLIDSEPLWLQAELDIFGALGLDLSDRHKLPDTLG--LrIDLVVKMWyqampwqgvSLDEVSAriiERAIEL 86
Cdd:cd04302    1 TILFDLDGTLTDSAEGITASVQYALEELGIPVPDESELRRFIGppL-EDSFRELL---------PFDEEEA---QRAVDA 67
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  87 VHE--------TRPLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFDQLVSAEyLPYSKPH-PEVYLIA 157
Cdd:cd04302   68 YREyykekglfENEVYPGIPELLEKLKAAGYRLYVATSKPEVFARRILEHFGLDEYFDGIAGAS-LDGSRVHkADVIRYA 146
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 515494731 158 AERLGSDPLRCITLEDSFNGMIATKAARMRSIVI-----PAAEYRHDPRWALADHKLETLEQL 215
Cdd:cd04302  147 LDTLGIAPEQAVMIGDRKHDIIGARANGIDSIGVlygygSEDELEEAGATYIVETPAELLELL 209
Methyltrans_Mon pfam14314
Virus-capping methyltransferase; This is the methyltransferase region of the Mononegavirales ...
78-173 2.64e-03

Virus-capping methyltransferase; This is the methyltransferase region of the Mononegavirales single-stranded RNA viral RNA polymerase enzymes. This region is involved in the mRNA-capping of the virion particles.


Pssm-ID: 316804  Cd Length: 685  Bit Score: 38.29  E-value: 2.64e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   78 RIIERAIELVHETRPLLPGvqqaLELCRRQGLNIGLASASplhMQRQVLKMF-DLEGYFDQLVSAEYLPYSKPHPEVyLI 156
Cdd:pfam14314 308 RVVQWATGAHYKLRPILND----LRITYRDFLVGGDGSGG---MTRALLRMFpDSRGVFNSLLELNDLMASGTHPLP-PS 379
                          90
                  ....*....|....*..
gi 515494731  157 AAERLGSDPLRCITLED 173
Cdd:pfam14314 380 AIMRLGEDSSRCVNFES 396
PRK13225 PRK13225
phosphoglycolate phosphatase; Provisional
2-218 2.75e-03

phosphoglycolate phosphatase; Provisional


Pssm-ID: 106187 [Multi-domain]  Cd Length: 273  Bit Score: 37.77  E-value: 2.75e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   2 AYSQRIETAIFDMDGLLIDSEPLWL---QAELDIFGALGLDLSDRHKL----PDTLGLRIDLvvkmwyqaMPWQgvslde 74
Cdd:PRK13225  57 SYPQTLQAIIFDFDGTLVDSLPTVVaiaNAHAPDFGYDPIDERDYAQLrqwsSRTIVRRAGL--------SPWQ------ 122
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731  75 vSARIIERAIELVHETRP---LLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDLEGYFdQLVSAEYLPYSKPHP 151
Cdd:PRK13225 123 -QARLLQRVQRQLGDCLPalqLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-SVVQAGTPILSKRRA 200
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 515494731 152 EVYLIAAErlGSDPLRCITLEDSFNGMiatKAARMRSIVIPAAEYRHDPRWALA----DHKLETLEQLTAA 218
Cdd:PRK13225 201 LSQLVARE--GWQPAAVMYVGDETRDV---EAARQVGLIAVAVTWGFNDRQSLVaacpDWLLETPSDLLQA 266
HAD pfam12710
haloacid dehalogenase-like hydrolase;
10-142 3.80e-03

haloacid dehalogenase-like hydrolase;


Pssm-ID: 432733 [Multi-domain]  Cd Length: 188  Bit Score: 37.13  E-value: 3.80e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515494731   10 AIFDMDGLLIDSEPLWL----QAELDIFGALGLDLSDRHKLPDTLGLRIDLVVKMWYQAMPWQGvsLDEVSARIIERAIE 85
Cdd:pfam12710   1 ALFDLDGTLLDGDSLFLliraLLRRGGPDLWRALLVLLLLALLRLLGRLSRAGARELLRALLAG--LPEEDAAELERFVA 78
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 515494731   86 LVHETRpLLPGVQQALELCRRQGLNIGLASASPLHMQRQVLKMFDlegyFDQLVSAE 142
Cdd:pfam12710  79 EVALPR-LHPGALELLAAHRAAGDRVVVVTGGLRPLVEPVLAELG----FDEVLATE 130
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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