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Conserved domains on  [gi|515618158|ref|WP_017050758|]
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MULTISPECIES: pentapeptide repeat-containing protein [Vibrio]

Protein Classification

COG5635 and YjbI domain-containing protein( domain architecture ID 11805752)

COG5635 and YjbI domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
468-667 2.97e-43

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


:

Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 153.94  E-value: 2.97e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 468 LEQSDLRKAVLNGIKLEGANLQGANLDGAnLERANLKGANLQGASLQGANLQGANLQDASLHKAHLNGAILDNANLNCAT 547
Cdd:COG1357    2 LSGADLSGADLSGADLSGADLSGANLSGA-LSGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGAD 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 548 LTGAqltilkssqdNITTLKNADLRMADLSEANLEGADLTKVCLTSAklqaslcsrtNFSKASLDSADFKSSIFINANFE 627
Cdd:COG1357   81 LSGA----------NLANLSGANLSGANLSGANLRGANLSGANLSGA----------DLSGADLSGANLSGADLSGANLS 140

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 515618158 628 KADLTQADFGGCDFTNANLQGAELSGCDLtqARLTSSNIT 667
Cdd:COG1357  141 GANLSGADLSGADLSGANLSGANLSGANL--ANLEGADLK 178
NACHT COG5635
Predicted NTPase, NACHT family domain [Signal transduction mechanisms];
98-401 1.03e-27

Predicted NTPase, NACHT family domain [Signal transduction mechanisms];


:

Pssm-ID: 444362 [Multi-domain]  Cd Length: 935  Bit Score: 119.52  E-value: 1.03e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158  98 MFILADAGMGKTSLLMMVKLSHLMAFWPKNY---------------------ECKLLKLGATTLSDIDKIENKSQTVLLL 156
Cdd:COG5635  183 LLILGEPGSGKTTLLRYLALELAERYLDAEDpipilielrdlaeeasledllAEALEKRGGEPEDALERLLRNGRLLLLL 262

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 157 DSLDEdtqCKQGGTIER-LTKILEATSCFY--RVVITCRTQFFPETAGSAFNTmgkisfnnydcplVYLSLFTDEQVDAY 233
Cdd:COG5635  263 DGLDE---VPDEADRDEvLNQLRRFLERYPkaRVIITSRPEGYDSSELEGFEV-------------LELAPLSDEQIEEF 326

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 234 LDKRYPRslkylfNQFYNPKLHDAKQSIRSIGSLQFRPFLLSHvetLLESHRQG----ATEYELYKGLVDTWLNREIIKL 309
Cdd:COG5635  327 LKKWFEA------TERKAERLLEALEENPELRELARNPLLLTL---LALLLRERgelpDTRAELYEQFVELLLERWDEQR 397

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 310 RKYHDKKINKEDLLKACIWLAETMQRQGTHTVALKHIQQLChceSHIILLNDSADRVIEGIdhidIGTNSLLNRNSYGEF 389
Cdd:COG5635  398 GLTIYRELSREELRELLSELALAMQENGRTEFAREELEEIL---REYLGRRKDAEALLDEL----LLRTGLLVERGEGRY 470

                        330
                 ....*....|..
gi 515618158 390 RFSHLSIREFLI 401
Cdd:COG5635  471 SFAHRSFQEYLA 482
 
Name Accession Description Interval E-value
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
468-667 2.97e-43

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 153.94  E-value: 2.97e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 468 LEQSDLRKAVLNGIKLEGANLQGANLDGAnLERANLKGANLQGASLQGANLQGANLQDASLHKAHLNGAILDNANLNCAT 547
Cdd:COG1357    2 LSGADLSGADLSGADLSGADLSGANLSGA-LSGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGAD 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 548 LTGAqltilkssqdNITTLKNADLRMADLSEANLEGADLTKVCLTSAklqaslcsrtNFSKASLDSADFKSSIFINANFE 627
Cdd:COG1357   81 LSGA----------NLANLSGANLSGANLSGANLRGANLSGANLSGA----------DLSGADLSGANLSGADLSGANLS 140

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 515618158 628 KADLTQADFGGCDFTNANLQGAELSGCDLtqARLTSSNIT 667
Cdd:COG1357  141 GANLSGADLSGADLSGANLSGANLSGANL--ANLEGADLK 178
NACHT COG5635
Predicted NTPase, NACHT family domain [Signal transduction mechanisms];
98-401 1.03e-27

Predicted NTPase, NACHT family domain [Signal transduction mechanisms];


Pssm-ID: 444362 [Multi-domain]  Cd Length: 935  Bit Score: 119.52  E-value: 1.03e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158  98 MFILADAGMGKTSLLMMVKLSHLMAFWPKNY---------------------ECKLLKLGATTLSDIDKIENKSQTVLLL 156
Cdd:COG5635  183 LLILGEPGSGKTTLLRYLALELAERYLDAEDpipilielrdlaeeasledllAEALEKRGGEPEDALERLLRNGRLLLLL 262

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 157 DSLDEdtqCKQGGTIER-LTKILEATSCFY--RVVITCRTQFFPETAGSAFNTmgkisfnnydcplVYLSLFTDEQVDAY 233
Cdd:COG5635  263 DGLDE---VPDEADRDEvLNQLRRFLERYPkaRVIITSRPEGYDSSELEGFEV-------------LELAPLSDEQIEEF 326

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 234 LDKRYPRslkylfNQFYNPKLHDAKQSIRSIGSLQFRPFLLSHvetLLESHRQG----ATEYELYKGLVDTWLNREIIKL 309
Cdd:COG5635  327 LKKWFEA------TERKAERLLEALEENPELRELARNPLLLTL---LALLLRERgelpDTRAELYEQFVELLLERWDEQR 397

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 310 RKYHDKKINKEDLLKACIWLAETMQRQGTHTVALKHIQQLChceSHIILLNDSADRVIEGIdhidIGTNSLLNRNSYGEF 389
Cdd:COG5635  398 GLTIYRELSREELRELLSELALAMQENGRTEFAREELEEIL---REYLGRRKDAEALLDEL----LLRTGLLVERGEGRY 470

                        330
                 ....*....|..
gi 515618158 390 RFSHLSIREFLI 401
Cdd:COG5635  471 SFAHRSFQEYLA 482
PRK15196 PRK15196
type III secretion system effector PipB2;
472-669 4.18e-26

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 110.10  E-value: 4.18e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 472 DLRKAVLNGIKLEGANLQGANLDGANLERANLKGANLQGASLQGANLQGANLQDASLHKAHLNGAILDNANLNCATLTGA 551
Cdd:PRK15196 153 NLKGAVLTGANLTAENLCDADLSGANLEGAVLFMADCEGANFKGANLSGTSLGDSNFKNACLEDSIMCGATLDHANLTGA 232

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 552 QltilkssqdnittLKNADLRMADLSEANLEGADLTKVCLTSAKLQASLCSRTNFSKASLDSADFKSSIFINANFEKADL 631
Cdd:PRK15196 233 N-------------LQHASLLGCSMIECNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASF 299

                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 515618158 632 TQADFGGCDFTNANLQGAELSGCDLTQARLTSSNITDS 669
Cdd:PRK15196 300 ISTNLDGADLAEANLNNTCFKDCTLTHLRTEDATMSTS 337
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 486-525 1.63e-11

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 59.28  E-value: 1.63e-11
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 515618158  486 ANLQGANLDGANLERANLKGANLQGASLQGANLQGANLQD 525
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
 
Name Accession Description Interval E-value
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
468-667 2.97e-43

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 153.94  E-value: 2.97e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 468 LEQSDLRKAVLNGIKLEGANLQGANLDGAnLERANLKGANLQGASLQGANLQGANLQDASLHKAHLNGAILDNANLNCAT 547
Cdd:COG1357    2 LSGADLSGADLSGADLSGADLSGANLSGA-LSGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGAD 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 548 LTGAqltilkssqdNITTLKNADLRMADLSEANLEGADLTKVCLTSAklqaslcsrtNFSKASLDSADFKSSIFINANFE 627
Cdd:COG1357   81 LSGA----------NLANLSGANLSGANLSGANLRGANLSGANLSGA----------DLSGADLSGANLSGADLSGANLS 140

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 515618158 628 KADLTQADFGGCDFTNANLQGAELSGCDLtqARLTSSNIT 667
Cdd:COG1357  141 GANLSGADLSGADLSGANLSGANLSGANL--ANLEGADLK 178
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
478-668 2.54e-42

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 151.25  E-value: 2.54e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 478 LNGIKLEGANLQGANLDGANLERANLKGAnLQGASLQGANLQGANLQDASLHKAHLNGAILDNANLNCATLTGAQLTilk 557
Cdd:COG1357    2 LSGADLSGADLSGADLSGADLSGANLSGA-LSGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLT--- 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 558 ssqdnittlkNADLRMADLseANLEGADLTKVCLTSAKLqaslcSRTNFSKASLDSADFKSSIFINANFEKADLTQADFG 637
Cdd:COG1357   78 ----------GADLSGANL--ANLSGANLSGANLSGANL-----RGANLSGANLSGADLSGADLSGANLSGADLSGANLS 140

                        170       180       190
                 ....*....|....*....|....*....|.
gi 515618158 638 GCDFTNANLQGAELSGCDLTQARLTSSNITD 668
Cdd:COG1357  141 GANLSGADLSGADLSGANLSGANLSGANLAN 171
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
453-652 1.91e-39

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 143.16  E-value: 1.91e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 453 LEGSQLSGFDLTYASLEQS----DLRKAVLNGIKLEGANLQGANLDGANLERANLKGANLQGASLQGANLQGANLqdASL 528
Cdd:COG1357   12 LSGADLSGADLSGANLSGAlsgaNLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGADLSGANL--ANL 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 529 HKAHLNGAILDNANLNCATLTGAQLTilkssqdnittlkNADLRMADLSEANLEGADLtkvcltsaklqaslcSRTNFSK 608
Cdd:COG1357   90 SGANLSGANLSGANLRGANLSGANLS-------------GADLSGADLSGANLSGADL---------------SGANLSG 141

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 515618158 609 ASLDSADFKSSIFINANFEKADLTQADFggcdftnANLQGAELS 652
Cdd:COG1357  142 ANLSGADLSGADLSGANLSGANLSGANL-------ANLEGADLK 178
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
487-670 8.57e-39

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 141.23  E-value: 8.57e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 487 NLQGANLDGANLERANLKGANLQGASLQGAnLQGANLQDASLHKAHLNGAILDNANLNCATLTGAQLTilkssqdnittl 566
Cdd:COG1357    1 DLSGADLSGADLSGADLSGADLSGANLSGA-LSGANLSGANLSGANLTGANLSGADLSGADLSGANLS------------ 67

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 567 kNADLRMADLSEANLEGADLTKVcltsaklqaslcSRTNFSKASLDSADFKSSIFINANFEKADLTQADFGGCDFTNANL 646
Cdd:COG1357   68 -GADLSGANLTGADLSGANLANL------------SGANLSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADL 134

                        170       180
                 ....*....|....*....|....
gi 515618158 647 QGAELSGCDLTQARLTSSNITDSQ 670
Cdd:COG1357  135 SGANLSGANLSGADLSGADLSGAN 158
NACHT COG5635
Predicted NTPase, NACHT family domain [Signal transduction mechanisms];
98-401 1.03e-27

Predicted NTPase, NACHT family domain [Signal transduction mechanisms];


Pssm-ID: 444362 [Multi-domain]  Cd Length: 935  Bit Score: 119.52  E-value: 1.03e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158  98 MFILADAGMGKTSLLMMVKLSHLMAFWPKNY---------------------ECKLLKLGATTLSDIDKIENKSQTVLLL 156
Cdd:COG5635  183 LLILGEPGSGKTTLLRYLALELAERYLDAEDpipilielrdlaeeasledllAEALEKRGGEPEDALERLLRNGRLLLLL 262

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 157 DSLDEdtqCKQGGTIER-LTKILEATSCFY--RVVITCRTQFFPETAGSAFNTmgkisfnnydcplVYLSLFTDEQVDAY 233
Cdd:COG5635  263 DGLDE---VPDEADRDEvLNQLRRFLERYPkaRVIITSRPEGYDSSELEGFEV-------------LELAPLSDEQIEEF 326

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 234 LDKRYPRslkylfNQFYNPKLHDAKQSIRSIGSLQFRPFLLSHvetLLESHRQG----ATEYELYKGLVDTWLNREIIKL 309
Cdd:COG5635  327 LKKWFEA------TERKAERLLEALEENPELRELARNPLLLTL---LALLLRERgelpDTRAELYEQFVELLLERWDEQR 397

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 310 RKYHDKKINKEDLLKACIWLAETMQRQGTHTVALKHIQQLChceSHIILLNDSADRVIEGIdhidIGTNSLLNRNSYGEF 389
Cdd:COG5635  398 GLTIYRELSREELRELLSELALAMQENGRTEFAREELEEIL---REYLGRRKDAEALLDEL----LLRTGLLVERGEGRY 470

                        330
                 ....*....|..
gi 515618158 390 RFSHLSIREFLI 401
Cdd:COG5635  471 SFAHRSFQEYLA 482
PRK15196 PRK15196
type III secretion system effector PipB2;
472-669 4.18e-26

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 110.10  E-value: 4.18e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 472 DLRKAVLNGIKLEGANLQGANLDGANLERANLKGANLQGASLQGANLQGANLQDASLHKAHLNGAILDNANLNCATLTGA 551
Cdd:PRK15196 153 NLKGAVLTGANLTAENLCDADLSGANLEGAVLFMADCEGANFKGANLSGTSLGDSNFKNACLEDSIMCGATLDHANLTGA 232

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 552 QltilkssqdnittLKNADLRMADLSEANLEGADLTKVCLTSAKLQASLCSRTNFSKASLDSADFKSSIFINANFEKADL 631
Cdd:PRK15196 233 N-------------LQHASLLGCSMIECNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASF 299

                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 515618158 632 TQADFGGCDFTNANLQGAELSGCDLTQARLTSSNITDS 669
Cdd:PRK15196 300 ISTNLDGADLAEANLNNTCFKDCTLTHLRTEDATMSTS 337
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
450-544 1.64e-21

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 92.31  E-value: 1.64e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 450 FKLLEGSQLSGFDLTYASLEQSDLRKAVLNGIKLEGANLQGANLDGANLERANLKGANLQGASLQGANLQGANLQDASLH 529
Cdd:COG1357   86 LANLSGANLSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLSGADLSGANLSGANLS 165

                         90
                 ....*....|....*
gi 515618158 530 KAHLngAILDNANLN 544
Cdd:COG1357  166 GANL--ANLEGADLK 178
PRK15196 PRK15196
type III secretion system effector PipB2;
454-602 5.53e-18

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 85.83  E-value: 5.53e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 454 EGSQLSGFDLTYASLEQSDLRKAVLNGIKLEGANLQGANLDGANLERANLKGANLQGASLQGANLQGANLQDASLHKAHL 533
Cdd:PRK15196 190 EGANFKGANLSGTSLGDSNFKNACLEDSIMCGATLDHANLTGANLQHASLLGCSMIECNCSGANMDHTNLSGATLIRADM 269

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 515618158 534 NGAILDNANLNCATLTGAQLTILKSSQDNITTlknADLRMADLSEANLEGADLTKVCLTSAKLQASLCS 602
Cdd:PRK15196 270 SGATLQGATIMAAIMEGAVLTRANLRKASFIS---TNLDGADLAEANLNNTCFKDCTLTHLRTEDATMS 335
PRK15196 PRK15196
type III secretion system effector PipB2;
453-599 1.59e-15

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 78.51  E-value: 1.59e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 453 LEGSQLSGFDLTYASLEQSDLRKAVLNGIKLEGANLQGANLDG-----ANLERANLKGANLQGASLQGANLQGANLQDAS 527
Cdd:PRK15196 199 LSGTSLGDSNFKNACLEDSIMCGATLDHANLTGANLQHASLLGcsmieCNCSGANMDHTNLSGATLIRADMSGATLQGAT 278

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 515618158 528 LHKAHLNGAILDNANLNCATLTGaqltilkssqdniTTLKNADLRMADLSEANLEGADLTKVCLTSAKLQAS 599
Cdd:PRK15196 279 IMAAIMEGAVLTRANLRKASFIS-------------TNLDGADLAEANLNNTCFKDCTLTHLRTEDATMSTS 337
PRK15197 PRK15197
type III secretion system effector PipB;
450-566 3.19e-15

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 76.89  E-value: 3.19e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 450 FKLLEGSQLSGFDLTYASLEQSDLRKAVLNGIKLEGANLQGANLDGANLERANLKGANLQGASLQGANLQGANLQDASLH 529
Cdd:PRK15197 163 HKDFQGEDLSDIDASNADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMSGVNLTAAILFGSDLT 242

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 515618158 530 KAHLNGAILDNANL-NCATLTGAQLTilkSSQDNITTL 566
Cdd:PRK15197 243 DTKLNGAKLDKIALtLAKALTGADLT---GSQHTPTPL 277
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 486-525 1.63e-11

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 59.28  E-value: 1.63e-11
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 515618158  486 ANLQGANLDGANLERANLKGANLQGASLQGANLQGANLQD 525
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 483-520 3.27e-11

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 58.51  E-value: 3.27e-11
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 515618158  483 LEGANLQGANLDGANLERANLKGANLQGASLQGANLQG 520
Cdd:pfam00805   3 LSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
PRK15196 PRK15196
type III secretion system effector PipB2;
505-670 6.38e-11

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 64.64  E-value: 6.38e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 505 GANLQGASLQGANLQGANLQDASLHKAHLNGAILdnanlncatltgaqltilkssqdnittlknadlRMADLSEANLEGA 584
Cdd:PRK15196 151 GMNLKGAVLTGANLTAENLCDADLSGANLEGAVL---------------------------------FMADCEGANFKGA 197

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 585 DL----------TKVC---------------LTSAKLQ-ASL--CS------------RTNFSKASLDSAD-----FKSS 619
Cdd:PRK15196 198 NLsgtslgdsnfKNACledsimcgatldhanLTGANLQhASLlgCSmiecncsganmdHTNLSGATLIRADmsgatLQGA 277

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 515618158 620 IFINANFEKADLTQADFGGCDFTNANLQGAELSGCDLTQARLTSSNITDSQ 670
Cdd:PRK15196 278 TIMAAIMEGAVLTRANLRKASFISTNLDGADLAEANLNNTCFKDCTLTHLR 328
PRK15197 PRK15197
type III secretion system effector PipB;
492-670 1.66e-10

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 62.64  E-value: 1.66e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 492 NLDGANLERANLKGANLQGASLQGANLQGANLQDASLHKAHLNGAildnaNLNCATLTGAQLTilkssqdnittlknadl 571
Cdd:PRK15197 155 NLRGVNLAHKDFQGEDLSDIDASNADFRETTLSNVNLVGANLCCA-----NLHAVNLMGSNMT----------------- 212

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 572 rmadlsEANLEGADLTkvcltsaklqaslcsrtnfskasldsadfkssifiNANFEKADLTQADFGGCDFTNANLQGAEL 651
Cdd:PRK15197 213 ------KANLTHADLT-----------------------------------CANMSGVNLTAAILFGSDLTDTKLNGAKL 251

                        170       180
                 ....*....|....*....|
gi 515618158 652 SGCDLTQAR-LTSSNITDSQ 670
Cdd:PRK15197 252 DKIALTLAKaLTGADLTGSQ 271
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 619-658 4.72e-10

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 55.04  E-value: 4.72e-10
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 515618158  619 SIFINANFEKADLTQADFGGCDFTNANLQGAELSGCDLTQ 658
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 496-535 5.85e-10

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 54.65  E-value: 5.85e-10
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 515618158  496 ANLERANLKGANLQGASLQGANLQGANLQDASLHKAHLNG 535
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 491-529 7.32e-10

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 54.65  E-value: 7.32e-10
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 515618158  491 ANLDGANLERANLKGANLQGASLQGANLQGANLQDASLH 529
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLS 39
PRK15196 PRK15196
type III secretion system effector PipB2;
447-549 8.10e-10

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 61.18  E-value: 8.10e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 447 LTGFKLLEgSQLSGFDLTYASLEQSDLRKAVLNGIKLEGANLQGANLDGANLERANLKGANLQGASLQGANLQGANLQDA 526
Cdd:PRK15196 239 LLGCSMIE-CNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLAEANLNNT 317

                         90       100
                 ....*....|....*....|...
gi 515618158 527 SLHKAHLNGAILDNANLNCATLT 549
Cdd:PRK15196 318 CFKDCTLTHLRTEDATMSTSTQT 340
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 624-662 1.57e-09

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 53.50  E-value: 1.57e-09
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 515618158  624 ANFEKADLTQADFGGCDFTNANLQGAELSGCDLTQARLT 662
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLS 39
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 501-540 2.07e-09

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 53.11  E-value: 2.07e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 515618158  501 ANLKGANLQGASLQGANLQGANLQDASLHKAHLNGAILDN 540
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
PRK15196 PRK15196
type III secretion system effector PipB2;
447-556 8.15e-09

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 58.09  E-value: 8.15e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 447 LTGFKL----LEGSQLSGFDLTYASLEQSDLRKAVLNGIKLEGANLQGANLDGANLERANLKGANLQGASLQGANLQGAN 522
Cdd:PRK15196 229 LTGANLqhasLLGCSMIECNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGAD 308

                         90       100       110
                 ....*....|....*....|....*....|....
gi 515618158 523 LQDASLHKAHLNGAILDNANLNCATLTGAQLTIL 556
Cdd:PRK15196 309 LAEANLNNTCFKDCTLTHLRTEDATMSTSTQTLF 342
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 506-544 8.21e-09

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 51.57  E-value: 8.21e-09
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 515618158  506 ANLQGASLQGANLQGANLQDASLHKAHLNGAILDNANLN 544
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLS 39
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 471-510 1.12e-08

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 51.19  E-value: 1.12e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 515618158  471 SDLRKAVLNGIKLEGANLQGANLDGANLERANLKGANLQG 510
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 476-515 1.69e-08

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 50.80  E-value: 1.69e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 515618158  476 AVLNGIKLEGANLQGANLDGANLERANLKGANLQGASLQG 515
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 609-648 6.23e-08

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 48.88  E-value: 6.23e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 515618158  609 ASLDSADFKSSIFINANFEKADLTQADFGGCDFTNANLQG 648
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 466-505 1.31e-07

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 48.11  E-value: 1.31e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 515618158  466 ASLEQSDLRKAVLNGIKLEGANLQGANLDGANLERANLKG 505
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 629-668 2.27e-07

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 47.33  E-value: 2.27e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 515618158  629 ADLTQADFGGCDFTNANLQGAELSGCDLTQARLTSSNITD 668
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
601-659 2.90e-07

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 48.42  E-value: 2.90e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 515618158  601 CSRTNFSKASLDSADFKSSIFINANFEKADLTQADFGGCDFTNA-----NLQGAELSGCDLTQA 659
Cdd:pfam13599  13 LSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAqfsgcNLKNSNFSDVKLKGA 76
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 511-550 3.11e-07

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 46.95  E-value: 3.11e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 515618158  511 ASLQGANLQGANLQDASLHKAHLNGAILDNANLNCATLTG 550
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 516-554 6.17e-07

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 46.18  E-value: 6.17e-07
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 515618158  516 ANLQGANLQDASLHKAHLNGAILDNANLNCATLTGAQLT 554
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLS 39
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 462-500 6.94e-07

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 46.18  E-value: 6.94e-07
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 515618158  462 DLTYASLEQSDLRKAVLNGIKLEGANLQGANLDGANLER 500
Cdd:pfam00805   2 NLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
614-670 3.01e-06

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 45.34  E-value: 3.01e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 515618158  614 ADFKSSIFINANFEKADLTQADFGGCDFTNANLQGAELSGCDLTQARLTSSNITDSQ 670
Cdd:pfam13599   1 ADFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQ 57
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
462-536 4.68e-06

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 44.96  E-value: 4.68e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 515618158  462 DLTYASLEQSDLRKAVLNGIKLEGANLQGANLDGANLERANLKGANLQGASLQGANLQGANLQDASLHKAHLNGA 536
Cdd:pfam13599   2 DFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGA 76
PRK15377 PRK15377
type III secretion system effector HECT-type E3 ubiquitin transferase;
536-658 4.91e-06

type III secretion system effector HECT-type E3 ubiquitin transferase;


Pssm-ID: 185275 [Multi-domain]  Cd Length: 782  Bit Score: 50.06  E-value: 4.91e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 536 AILDNANLNCATLTGAQLTILKSSQDNITTLKNADlrmADLSEANLEGADLTKVCLTSAKLQASLCSR-TNFSKASLDSA 614
Cdd:PRK15377 160 SLQATSSPSSPADWAKKLTDARLRQEAGEELTYAD---RDFSNADFRNINFSKINPSGFMLRDGDIIKgFNFSNSKFTYS 236

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 515618158 615 DFKSSIFINANFEKADLTQADFGGCDFTNANLQGAELSGCDLTQ 658
Cdd:PRK15377 237 DISHLHFDECRFTYSTLSDVVCSNTKFSNSDMNEASLKYSITTQ 280
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 601-638 6.62e-06

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 43.48  E-value: 6.62e-06
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 515618158  601 CSRTNFSKASLDSADFKSSIFINANFEKADLTQADFGG 638
Cdd:pfam00805   3 LSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
PRK15377 PRK15377
type III secretion system effector HECT-type E3 ubiquitin transferase;
446-550 6.74e-06

type III secretion system effector HECT-type E3 ubiquitin transferase;


Pssm-ID: 185275 [Multi-domain]  Cd Length: 782  Bit Score: 49.29  E-value: 6.74e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 446 LLTGFKLLEGSQLSGFDLTYASLEQSDLRKAVLNGIKLEGANLQGANLDGANLERANLKGANLQGASL--QGANLQGANL 523
Cdd:PRK15377 211 NPSGFMLRDGDIIKGFNFSNSKFTYSDISHLHFDECRFTYSTLSDVVCSNTKFSNSDMNEASLKYSITtqQQPSFIETTL 290

                         90       100       110
                 ....*....|....*....|....*....|.
gi 515618158 524 QDASL-HKAHLNGAIL---DNANLNCATLTG 550
Cdd:PRK15377 291 KNTIIiHKANLSGVILnepDNSSPPSVSLGG 321
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 604-643 1.82e-05

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 41.94  E-value: 1.82e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 515618158  604 TNFSKASLDSADFKSSIFINANFEKADLTQADFGGCDFTN 643
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 634-669 2.05e-05

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 41.94  E-value: 2.05e-05
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 515618158  634 ADFGGCDFTNANLQGAELSGCDLTQARLTSSNITDS 669
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGA 36
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
482-553 4.81e-05

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 41.88  E-value: 4.81e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 515618158  482 KLEGANLQGANLDGANLERANLKGANLQGASLQGANLQGANLQDASLHKAHLNGAILDNANLNCATLTGAQL 553
Cdd:pfam13599   7 SFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 456-495 4.91e-05

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 40.79  E-value: 4.91e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 515618158  456 SQLSGFDLTYASLEQSDLRKAVLNGIKLEGANLQGANLDG 495
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 521-583 6.34e-05

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 40.40  E-value: 6.34e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 515618158  521 ANLQDASLHKAHLNGAILDNANLNcatltgaqltilkssqdnittlkNADLRMADLSEANLEG 583
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLT-----------------------GANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 541-592 6.72e-05

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 40.40  E-value: 6.72e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 515618158  541 ANLNCATLTGAqltilkssqdnitTLKNADLRMADLSEANLEGADLTKVCLT 592
Cdd:pfam00805   1 ANLSGANLSGA-------------NLSGANLSGANLTGANLSGADLSGANLS 39
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
616-682 9.56e-05

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 41.11  E-value: 9.56e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 515618158  616 FKSSIFINANFEKADLTQADFGGCDFTNANLQGAELSGCDLTQARLTSSNITDSQRGVAIFRKYKNE 682
Cdd:pfam13599   8 FEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLK 74
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 639-670 9.67e-05

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 40.02  E-value: 9.67e-05
                          10        20        30
                  ....*....|....*....|....*....|..
gi 515618158  639 CDFTNANLQGAELSGCDLTQARLTSSNITDSQ 670
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGAD 32
PRK15377 PRK15377
type III secretion system effector HECT-type E3 ubiquitin transferase;
515-665 1.27e-04

type III secretion system effector HECT-type E3 ubiquitin transferase;


Pssm-ID: 185275 [Multi-domain]  Cd Length: 782  Bit Score: 45.44  E-value: 1.27e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158 515 GANLQGANLQDASLHKAHLNGAILDNANLncatltgaqltilkssqdnittlknadLRMADLSEANLEGADLTKVCL--- 591
Cdd:PRK15377 194 DRDFSNADFRNINFSKINPSGFMLRDGDI---------------------------IKGFNFSNSKFTYSDISHLHFdec 246

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 515618158 592 --TSAKLQASLCSRTNFSKASLDSADFKSSIFINanfekadlTQADFGGCDFTNANL-QGAELSGCDLTQARLTSSN 665
Cdd:PRK15377 247 rfTYSTLSDVVCSNTKFSNSDMNEASLKYSITTQ--------QQPSFIETTLKNTIIiHKANLSGVILNEPDNSSPP 315
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 453-490 1.52e-04

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 39.63  E-value: 1.52e-04
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 515618158  453 LEGSQLSGFDLTYASLEQSDLRKAVLNGIKLEGANLQG 490
Cdd:pfam00805   3 LSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 566-607 2.61e-04

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 38.86  E-value: 2.61e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 515618158  566 LKNADLRMADLSEANLEGADLTKVCLTSAKLqaslcSRTNFS 607
Cdd:pfam00805   3 LSGANLSGANLSGANLSGANLTGANLSGADL-----SGANLS 39
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
490-554 3.63e-04

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 39.56  E-value: 3.63e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 515618158  490 GANLDGANLERANLKGANLQGASLQGANLQGANLQDASLHKAHLNGAILDNANLNCATLTGAQLT 554
Cdd:pfam13599  10 GCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLK 74
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
606-670 7.42e-04

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 38.79  E-value: 7.42e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158  606 FSKASLDSADFKSSIFINANFEKADLTQADFGGC-----DFTNANLQGAELSGCDLTQARLTSSNITDSQ 670
Cdd:pfam13599   8 FEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCnlrdvDFLEAQLKNAQFSGCNLKNSNFSDVKLKGAD 77
PRK15319 PRK15319
fibronectin-binding autotransporter adhesin ShdA;
471-677 1.16e-03

fibronectin-binding autotransporter adhesin ShdA;


Pssm-ID: 185219 [Multi-domain]  Cd Length: 2039  Bit Score: 42.38  E-value: 1.16e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158  471 SDLRKAVLNGIKLE-GA--NLQGANLDGANLERANLKGANLQGASLQGANLQ-GANLQDASLH---KAHLNGAILDNANL 543
Cdd:PRK15319  128 PDGGKYVSNAISLDhYAilELTDAKITTTGIYTQGISAADGSTLTLTDSTLTiDGNFGVMTLYtgsEATLDGTIVEAANS 207

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158  544 NCATLT-GAQLTILKSSQdniTTLKNADLRMADLSEANLEGADLtkvcltsaklqaslcsrtNFSKASLDSADFKSSIfI 622
Cdd:PRK15319  208 SSAQVQqGSTLNVLDGST---ITLAQGQINVVAGNTATDEGSTL------------------NLSDSSVSSAGTMSTI-Q 265

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 515618158  623 NANFEKADLTQADFggcdfTNANLQGAELSGCDLTQARLTSSNITDSQRGVAIFR 677
Cdd:PRK15319  266 GTNKAALNLTNATI-----THTNASGAAVQANNATTLDISGGNITSAGTGVYILA 315
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
606-669 1.90e-03

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 37.64  E-value: 1.90e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 515618158  606 FSKASLDSADFKSSIFINANFEKADLTQADFGGCDFTNANLQGAELSGCDLTQARLTSSNITDS 669
Cdd:pfam13599   3 FTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNS 66
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
453-523 2.12e-03

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 37.25  E-value: 2.12e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 515618158  453 LEGSQLSGFDLTYASLEQSDLRKAVLNGIKLEGANLQGANLDGANLERANLKGANLQGASLQGANLQGANL 523
Cdd:pfam13599   8 FEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 569-617 2.25e-03

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 36.16  E-value: 2.25e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 515618158  569 ADLRMADLSEANLEGADLTKVCLTSAklqaslcsrtNFSKASLDSADFK 617
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGA----------NLSGADLSGANLS 39
Pentapeptide_3 pfam13576
Pentapeptide repeats (9 copies);
602-654 4.20e-03

Pentapeptide repeats (9 copies);


Pssm-ID: 433322 [Multi-domain]  Cd Length: 48  Bit Score: 35.67  E-value: 4.20e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 515618158  602 SRTNFSkaslDSADFKSSIFIN-ANFEKADLTQADFGGCDFTnanlQGAELSGC 654
Cdd:pfam13576   2 SGATFT----GAADFSGATFSGdASFSNATFGDADFSGATFT----GDADFSGA 47
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
565-636 8.46e-03

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 35.71  E-value: 8.46e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 515618158  565 TLKNADLRMADLSEANLEGADLTKVCLTSAKLQASLCSRTNFSKASLDSADFKSSIFINANFEKADLTQADF 636
Cdd:pfam13599   7 SFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
526-616 8.89e-03

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 35.71  E-value: 8.89e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515618158  526 ASLHKAHLNGAILDNANLNCATLTGAQLTILKSSQDNIT--TLKNADLRMADLSEANLEGADLtkvcltsaklqaslcSR 603
Cdd:pfam13599   1 ADFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDdcNLRDVDFLEAQLKNAQFSGCNL---------------KN 65

                          90
                  ....*....|...
gi 515618158  604 TNFSKASLDSADF 616
Cdd:pfam13599  66 SNFSDVKLKGADF 78
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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