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Conserved domains on  [gi|515628177|ref|WP_017060777|]
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MULTISPECIES: flagellar motor protein MotB [Vibrio]

Protein Classification

flagellar motor protein MotB( domain architecture ID 11483477)

flagellar motor protein MotB (motility protein B) is required for the rotation of the flagellar motor

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
motB PRK08944
flagellar motor protein MotB; Reviewed
 1-313 0e+00

flagellar motor protein MotB; Reviewed


:

Pssm-ID: 236356 [Multi-domain]  Cd Length: 302  Bit Score: 548.46  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177   1 MDEENPCKCPPPGLPQWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGVQNRLEVKDIPKGTSIIAQEFR 80
Cdd:PRK08944   1 MMAEKKCKCPPPGAPAWLATFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGVQNKIEVKDIPKGTSIIAQEFR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177  81 PGRPEPTPIDVIMQQTIDITQQTLEFHEGESERAGGTMRDQGKMTGGKSPEVSTHDNQNSESDqqqqqaeaqsqeMETLM 160
Cdd:PRK08944  81 PGRPEPTPIEVIMQQTIDMTQQTLEFQAGESDSAGGTQQQRGKQRGGEASAEVKAEKAAAQEQ------------IEDLV 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 161 ESIKKALEREIDQGAIEVENLGQQIVIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKDVPGIVRISGHTDNQRLDSELY 240
Cdd:PRK08944 149 KKLAQQLEKEIEDGAIEIESLGQQIIIRIREKGSFPSGSAFLQPKFKPVVRKIGELLKDVPGIITVSGHTDNVPISSELY 228

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 515628177 241 RSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPVEPNDTEWQRSLNRRVEISIMQGEPLYSDEVPVI 313
Cdd:PRK08944 229 RSNWDLSSARAVAVAHELLKVKGFDPQRLKVVGMADTQPLVPNDTAENRARNRRVEIIIEQGKAKESDEIPVK 301
 
Name Accession Description Interval E-value
motB PRK08944
flagellar motor protein MotB; Reviewed
 1-313 0e+00

flagellar motor protein MotB; Reviewed


Pssm-ID: 236356 [Multi-domain]  Cd Length: 302  Bit Score: 548.46  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177   1 MDEENPCKCPPPGLPQWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGVQNRLEVKDIPKGTSIIAQEFR 80
Cdd:PRK08944   1 MMAEKKCKCPPPGAPAWLATFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGVQNKIEVKDIPKGTSIIAQEFR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177  81 PGRPEPTPIDVIMQQTIDITQQTLEFHEGESERAGGTMRDQGKMTGGKSPEVSTHDNQNSESDqqqqqaeaqsqeMETLM 160
Cdd:PRK08944  81 PGRPEPTPIEVIMQQTIDMTQQTLEFQAGESDSAGGTQQQRGKQRGGEASAEVKAEKAAAQEQ------------IEDLV 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 161 ESIKKALEREIDQGAIEVENLGQQIVIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKDVPGIVRISGHTDNQRLDSELY 240
Cdd:PRK08944 149 KKLAQQLEKEIEDGAIEIESLGQQIIIRIREKGSFPSGSAFLQPKFKPVVRKIGELLKDVPGIITVSGHTDNVPISSELY 228

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 515628177 241 RSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPVEPNDTEWQRSLNRRVEISIMQGEPLYSDEVPVI 313
Cdd:PRK08944 229 RSNWDLSSARAVAVAHELLKVKGFDPQRLKVVGMADTQPLVPNDTAENRARNRRVEIIIEQGKAKESDEIPVK 301
MotB COG1360
Flagellar motor protein MotB [Cell motility];
159-304 1.35e-54

Flagellar motor protein MotB [Cell motility];


Pssm-ID: 440971 [Multi-domain]  Cd Length: 174  Bit Score: 175.42  E-value: 1.35e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 159 LMESIKKALEREIDQGAIEVENLGQQIVIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKDVPGIVRISGHTDNQRLDSE 238
Cdd:COG1360   27 LLWALSSALEENLLSGQVEVRITEEGLVIEIQDRVLFDSGSAELTPEGRELLDKIAAVLAEVPNRIRVEGHTDNVPISTA 106

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 515628177 239 LYRSNWDLSSQRAVSVAQEMEKvRGFSHQRLRVRGMADTEPVEPNDTEWQRSLNRRVEISIMQGEP 304
Cdd:COG1360  107 RFPSNWELSAARAAAVVRYLIE-GGVPPERLSAVGYGDTRPLAPNDTPEGRARNRRVEIVILRRAA 171
type_VI_ompA TIGR03350
type VI secretion system peptidoglycan-associated domain; The flagellar motor protein MotB, ...
 163-299 1.86e-37

type VI secretion system peptidoglycan-associated domain; The flagellar motor protein MotB, the Gram-negative bacterial outer membrane protein OmpA (with an N-terminal outer membrane beta barrel domain) share a C-terminal peptidoglycan-associating homology region. This model describes a domain found fused to type VI secretion system homologs of the type IV system protein DotU (see model TIGR03349), with OmpA/MotB homology. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]


Pssm-ID: 274533 [Multi-domain]  Cd Length: 137  Bit Score: 130.11  E-value: 1.86e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177  163 IKKALEREIDQGAIEVENLGQQIVIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKDVPGIVRISGHTDNQRLDSELYRS 242
Cdd:TIGR03350   2 LRALLAPEIAAGLLTVDEDGDRSVVRLRGDELFASGSAEVRAEFEPLLLRIAKALAAVPGRITVVGHTDNVPIRTARFPS 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 515628177  243 NWDLSSQRAVSVAQEMEKvRGFSHQRLRVRGMADTEPVEPNDTEWQRSLNRRVEISI 299
Cdd:TIGR03350  82 NWHLSEARAKAVADVLAQ-AGGPAGRVRAEGRGDSEPIASNATAAGRARNRRVEIDV 137
OmpA_C-like cd07185
Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; ...
 195-299 1.19e-33

Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.


Pssm-ID: 143586 [Multi-domain]  Cd Length: 106  Bit Score: 119.19  E-value: 1.19e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 195 FPSGSAFLQPKFRPLVRQVAELVKDVPGI-VRISGHTDNQRLDSelyrSNWDLSSQRAVSVAQEMEKvRGFSHQRLRVRG 273
Cdd:cd07185    6 FDFGSAELTPEAKPLLDKLAEVLKKNPDAkIRIEGHTDSRGSDA----YNQELSERRAEAVADYLVS-KGVDASRITAVG 80

                         90       100
                 ....*....|....*....|....*.
gi 515628177 274 MADTEPVEPNDTEWQRSLNRRVEISI 299
Cdd:cd07185   81 YGESRPIASNDTEEGRAKNRRVEIVI 106
MotB_plug pfam13677
Membrane MotB of proton-channel complex MotA/MotB; This is the MotB member of the E.coli MotA ...
 4-57 1.33e-18

Membrane MotB of proton-channel complex MotA/MotB; This is the MotB member of the E.coli MotA/MotB proton-channel complex that forms the stator of the bacterial membrane flagellar motor. Key residues act as a plug to prevent premature proton flow. The plug is in the periplasm just C-terminal to the MotB TM, consisting of an amphipathic alpha helix flanked by Pro-52 and Pro-65, eg in Swiss:D3V2T1. In addition to the Pro residues, Ile-58, Tyr-61, and Phe 62 are also essential for plug function.


Pssm-ID: 463955 [Multi-domain]  Cd Length: 57  Bit Score: 77.95  E-value: 1.33e-18
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 515628177    4 ENPCKCPPPGLPQWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAF 57
Cdd:pfam13677   4 KKEPEHEGGHGERWLVTYADLMTLLLAFFVLLYSMSSVDEKKFQQIAESFQDAF 57
 
Name Accession Description Interval E-value
motB PRK08944
flagellar motor protein MotB; Reviewed
 1-313 0e+00

flagellar motor protein MotB; Reviewed


Pssm-ID: 236356 [Multi-domain]  Cd Length: 302  Bit Score: 548.46  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177   1 MDEENPCKCPPPGLPQWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGVQNRLEVKDIPKGTSIIAQEFR 80
Cdd:PRK08944   1 MMAEKKCKCPPPGAPAWLATFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGVQNKIEVKDIPKGTSIIAQEFR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177  81 PGRPEPTPIDVIMQQTIDITQQTLEFHEGESERAGGTMRDQGKMTGGKSPEVSTHDNQNSESDqqqqqaeaqsqeMETLM 160
Cdd:PRK08944  81 PGRPEPTPIEVIMQQTIDMTQQTLEFQAGESDSAGGTQQQRGKQRGGEASAEVKAEKAAAQEQ------------IEDLV 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 161 ESIKKALEREIDQGAIEVENLGQQIVIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKDVPGIVRISGHTDNQRLDSELY 240
Cdd:PRK08944 149 KKLAQQLEKEIEDGAIEIESLGQQIIIRIREKGSFPSGSAFLQPKFKPVVRKIGELLKDVPGIITVSGHTDNVPISSELY 228

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 515628177 241 RSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPVEPNDTEWQRSLNRRVEISIMQGEPLYSDEVPVI 313
Cdd:PRK08944 229 RSNWDLSSARAVAVAHELLKVKGFDPQRLKVVGMADTQPLVPNDTAENRARNRRVEIIIEQGKAKESDEIPVK 301
MotB COG1360
Flagellar motor protein MotB [Cell motility];
159-304 1.35e-54

Flagellar motor protein MotB [Cell motility];


Pssm-ID: 440971 [Multi-domain]  Cd Length: 174  Bit Score: 175.42  E-value: 1.35e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 159 LMESIKKALEREIDQGAIEVENLGQQIVIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKDVPGIVRISGHTDNQRLDSE 238
Cdd:COG1360   27 LLWALSSALEENLLSGQVEVRITEEGLVIEIQDRVLFDSGSAELTPEGRELLDKIAAVLAEVPNRIRVEGHTDNVPISTA 106

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 515628177 239 LYRSNWDLSSQRAVSVAQEMEKvRGFSHQRLRVRGMADTEPVEPNDTEWQRSLNRRVEISIMQGEP 304
Cdd:COG1360  107 RFPSNWELSAARAAAVVRYLIE-GGVPPERLSAVGYGDTRPLAPNDTPEGRARNRRVEIVILRRAA 171
type_VI_ompA TIGR03350
type VI secretion system peptidoglycan-associated domain; The flagellar motor protein MotB, ...
 163-299 1.86e-37

type VI secretion system peptidoglycan-associated domain; The flagellar motor protein MotB, the Gram-negative bacterial outer membrane protein OmpA (with an N-terminal outer membrane beta barrel domain) share a C-terminal peptidoglycan-associating homology region. This model describes a domain found fused to type VI secretion system homologs of the type IV system protein DotU (see model TIGR03349), with OmpA/MotB homology. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]


Pssm-ID: 274533 [Multi-domain]  Cd Length: 137  Bit Score: 130.11  E-value: 1.86e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177  163 IKKALEREIDQGAIEVENLGQQIVIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKDVPGIVRISGHTDNQRLDSELYRS 242
Cdd:TIGR03350   2 LRALLAPEIAAGLLTVDEDGDRSVVRLRGDELFASGSAEVRAEFEPLLLRIAKALAAVPGRITVVGHTDNVPIRTARFPS 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 515628177  243 NWDLSSQRAVSVAQEMEKvRGFSHQRLRVRGMADTEPVEPNDTEWQRSLNRRVEISI 299
Cdd:TIGR03350  82 NWHLSEARAKAVADVLAQ-AGGPAGRVRAEGRGDSEPIASNATAAGRARNRRVEIDV 137
PRK06925 PRK06925
flagellar motor protein MotB;
10-299 3.66e-35

flagellar motor protein MotB;


Pssm-ID: 235887 [Multi-domain]  Cd Length: 230  Bit Score: 127.19  E-value: 3.66e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177  10 PPPGLPQWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMkfafgvQNRLEVKDIPKGTSiiaqefrpgrpeptpi 89
Cdd:PRK06925   8 QSKGSPKWMVTFSDLITLILVFFILLFSMSQIDAQKFKAAVESF------QQRGSLGFLPSAIE---------------- 65

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177  90 dvimqqtiditqqtLEFHEGESEraggtmrDQGKMTggkspevsthdnqnsesdqqqqqaeaqsQEMETLMESIKKALER 169
Cdd:PRK06925  66 --------------FENPAESSE-------DEEKQE----------------------------DQLDELLKKVNEYIEE 96

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 170 EIDQGAIEVENLGQQIVIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKDVPGIVRISGHTDNQRLDSELYRSNWDLSSQ 249
Cdd:PRK06925  97 NELKSVITAKRDERGVVLVLQEAVLFETGEADILKQAEPFLHKIGVLLSTIPNDIKVEGHTDSRPISTYRYPSNWELSAA 176

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 515628177 250 RAVSVAQEMEKVRGFSHQRLRVRGMADTEPVEPNDTEWQRSLNRRVEISI 299
Cdd:PRK06925 177 RASSVIRYFTSKEKLDSSRFIAVGYADTKPVVPNTTEENMQENRRVEIVI 226
PRK09038 PRK09038
flagellar motor protein MotD; Reviewed
 17-312 1.21e-34

flagellar motor protein MotD; Reviewed


Pssm-ID: 181618 [Multi-domain]  Cd Length: 281  Bit Score: 127.43  E-value: 1.21e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177  17 WMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGVQNRlEVKDIPKGtsiiaqEFRPGRPEPTPIDVIMQQT 96
Cdd:PRK09038  17 WLVSYADFITLLFAFFVVMYAISSVNEGKYKVLSEALTGAFNGPSR-SMKPIPIG------KEQPKTTQPARPLVIDSEQ 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177  97 IDITQQtlefhegeseraggtmrdqgkmtggkspevsthdnqnsesdqqqqqaeaqsQEMETLMESIKKALEREIDQGAI 176
Cdd:PRK09038  90 PDARAQ---------------------------------------------------DQLKTIADDLRKALGPLIESGQV 118

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 177 EVENLGQQIVIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKDVPGIVRISGHTDNQRLDSELYRSNWDLSSQRAVSVAQ 256
Cdd:PRK09038 119 TVRRNELWIEIEINSSLLFGSGDAMLSDQAFAILEKVAEVLKPAPNPIHVEGFTDNVPIATAQFPSNWELSAARAASVVR 198

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 515628177 257 eMEKVRGFSHQRLRVRGMADTEPVEPNDTEWQRSLNRRVEISIMQGEPLYSDEVPV 312
Cdd:PRK09038 199 -LLADDGVAPSRLAAVGYGEFQPVADNDTAEGRARNRRVVLVILRNLDVRRSLTPV 253
OmpA_C-like cd07185
Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; ...
 195-299 1.19e-33

Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.


Pssm-ID: 143586 [Multi-domain]  Cd Length: 106  Bit Score: 119.19  E-value: 1.19e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 195 FPSGSAFLQPKFRPLVRQVAELVKDVPGI-VRISGHTDNQRLDSelyrSNWDLSSQRAVSVAQEMEKvRGFSHQRLRVRG 273
Cdd:cd07185    6 FDFGSAELTPEAKPLLDKLAEVLKKNPDAkIRIEGHTDSRGSDA----YNQELSERRAEAVADYLVS-KGVDASRITAVG 80

                         90       100
                 ....*....|....*....|....*.
gi 515628177 274 MADTEPVEPNDTEWQRSLNRRVEISI 299
Cdd:cd07185   81 YGESRPIASNDTEEGRAKNRRVEIVI 106
PRK07033 PRK07033
DotU family type VI secretion system protein;
161-300 4.77e-33

DotU family type VI secretion system protein;


Pssm-ID: 180801 [Multi-domain]  Cd Length: 427  Bit Score: 126.32  E-value: 4.77e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 161 ESIKKALEREIDQGAIEVENLGQQIVIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKDVPGIVRISGHTDNQRLDSELY 240
Cdd:PRK07033 284 PRLAKFLEPEIRAGLVAVRDEADRSVVTLRGDGLFASASTSVRDRYQPVLARVADALNQVKGNVLVTGYSDNVPIRTARF 363

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 241 RSNWDLSSQRAVSVaQEMEKVRGFSHQRLRVRGMADTEPVEPNDTEWQRSLNRRVEISIM 300
Cdd:PRK07033 364 PSNWELSQARAQAV-RALLAARLGQPERVTAEGRGDSDPVAPNDSAENRARNRRVEITLL 422
OmpA COG2885
Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall ...
 195-299 2.43e-26

Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442131 [Multi-domain]  Cd Length: 294  Bit Score: 105.64  E-value: 2.43e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 195 FPSGSAFLQPKFRPLVRQVAELVKDVPGI-VRISGHTDNQrlDSELYrsNWDLSSQRAVSVAQEMEKvRGFSHQRLRVRG 273
Cdd:COG2885  191 FDFDSAELTPEAKAALDELAALLKENPDLrIEIEGHTDSR--GSDAY--NLALSERRAEAVKDYLVS-KGIPASRITAVG 265

                         90       100
                 ....*....|....*....|....*.
gi 515628177 274 MADTEPVEPNDTEWQRSLNRRVEISI 299
Cdd:COG2885  266 YGESRPVASNDTEEGRAKNRRVEIVV 291
PRK06742 PRK06742
flagellar motor protein MotS; Reviewed
 8-301 7.37e-26

flagellar motor protein MotS; Reviewed


Pssm-ID: 102525 [Multi-domain]  Cd Length: 225  Bit Score: 102.45  E-value: 7.37e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177   8 KCPPPGLPQWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQiagsMKFAFGVQNRLEVKdipkgtsiiaqefrpgrpept 87
Cdd:PRK06742   3 KRPQKGSPRWMTTFTDLTMLLLTFFVLLVATSKQDAVKLSK----MLEKFSDTEQVDAK--------------------- 57

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177  88 pidvIMQQTI-DITqqtlefHEGESERAGGTMRdqgkmtggkspevsthdnqnsesdqqqqqaeaqsqemetlMESIKKA 166
Cdd:PRK06742  58 ----VMENTIpDIS------HEKNDEKMISKKR----------------------------------------MDELYKK 87

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 167 LEREIDQGAIEVENLGQQ---IVIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKDVPGIVRISGHTDNQRLDSELYRSN 243
Cdd:PRK06742  88 LKAYVDNNGISQVNVYREdtgVSVVIVDNLIFDTGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFPSN 167

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 515628177 244 WDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPVEPNDTEWQRSLNRRVEISIMQ 301
Cdd:PRK06742 168 WELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPVVPNDSPQNWEKNRRVVIYIKE 225
motB PRK06667
flagellar motor protein MotB; Validated
 8-300 4.75e-25

flagellar motor protein MotB; Validated


Pssm-ID: 180652 [Multi-domain]  Cd Length: 252  Bit Score: 101.02  E-value: 4.75e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177   8 KCP--PPGLPQWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAgsmkfafgvqnrlevkdipkgTSIIAQEFRPGrpe 85
Cdd:PRK06667   7 KCPkcIQGAPEYMLTYGDMVTLLLCFFVMLFTTNDVDENVLQIIS---------------------ASFTGTGFFKG--- 62

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177  86 ptpidvimqqtiditQQTLEFheGESERAGGTMRDQGKMTGGKSpevsthdnqnsesdqqqqqaeaqsqemetLMESIKK 165
Cdd:PRK06667  63 ---------------GQTLSK--GKLSELGNSIMSLPSTEKGKQ-----------------------------LSQAKKN 96

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 166 ALE---REIDQGAIEVENLGQQIVIRIREKGAFPSGSAFLQ-PKFRPLVRQVAELVKDVPGI---VRISGHTDNQRLDSE 238
Cdd:PRK06667  97 ASSlfkPEIQSNKVAVTEDERGLVISLASDAFFYPGSAEVKlEENRETLQKIASFIGFLDLAgrnFRIEGHTDNVDVNPE 176

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 515628177 239 -LYRSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPVEPNDTEWQRSLNRRVEISIM 300
Cdd:PRK06667 177 gPWKSNWELSGARAVNMLEYILNYGDQSESWFQVSGFAGSRPLATEDTPEGRAYNRRIDIVIL 239
motB PRK07734
flagellar motor protein MotB; Reviewed
 17-300 4.11e-24

flagellar motor protein MotB; Reviewed


Pssm-ID: 236080 [Multi-domain]  Cd Length: 259  Bit Score: 98.66  E-value: 4.11e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177  17 WMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGvqnrlevkdipKGTSIIAQEfRPGRPEPTPidvimqqt 96
Cdd:PRK07734  19 WLIPYADLLTLLLALFIVLFAMSSIDAAKFKQMAVAFNSEFA-----------GGTGVKDFL-SDQKPEDEK-------- 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177  97 iDITQQTLEFHEGESERaggtmrdqgkmtggKSPEVSTHDnqnsesdqqqqqaeaqsqeMETLmesikKALEREIDQgAI 176
Cdd:PRK07734  79 -ELSASSLEAEQAKKKE--------------EAEAKKKKE-------------------MEEL-----KAVQKKIDQ-YI 118

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 177 EVENLGQQIVIRIREKGA---------FPSGSAFLQPKFRPLVRQVAEL-VKDVPGIVRISGHTDNQRLDSELYRSNWDL 246
Cdd:PRK07734 119 KEKQLSSSLQTKLTEEGLlitildnilFDSGKADVRLEDLPLAKEISNLlVSNPPRNITISGHTDNVPIANAQFASNWEL 198

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 515628177 247 SSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPVEPNDTEWQRSLNRRVEISIM 300
Cdd:PRK07734 199 SVMRAVNFMQVLLENKELDPEKFSAKGYGEYKPIASNDTAEGRAKNRRVEVLIL 252
PRK08126 PRK08126
hypothetical protein; Provisional
 163-301 8.15e-24

hypothetical protein; Provisional


Pssm-ID: 236157 [Multi-domain]  Cd Length: 432  Bit Score: 100.54  E-value: 8.15e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 163 IKKALEREIDQGAIEVENLGQQIVIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKDVPGIVRISGHTDNQRLDSELYRS 242
Cdd:PRK08126 295 LKILLKNEIARGTLSVDEDARHSSVVFRGDAMFVPGQATVNPAMGPLIAKIAREIARVGGKVTVTGHTDNQPIRSAQFAS 374

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 515628177 243 NWDLSSQRAVSVAQeMEKVRGFSHQRLRVRGMADTEPVEPNDTEWQRSLNRRVEISIMQ 301
Cdd:PRK08126 375 NLVLSEKRAAQVAQ-MLQSAGVPASRLEAVGKGDAQPVADNRTPQGRAQNRRVEITVAE 432
PRK09039 PRK09039
peptidoglycan -binding protein;
195-297 6.87e-23

peptidoglycan -binding protein;


Pssm-ID: 181619 [Multi-domain]  Cd Length: 343  Bit Score: 96.96  E-value: 6.87e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 195 FPSGSAFLQPKFRPLVRQVA----ELVKDVPG----IVRISGHTDNQRLDSEL-YRSNWDLSSQRAVSVAQEMEKvRGFS 265
Cdd:PRK09039 228 FPTGSAELNPEGQAEIAKLAaaliELAKEIPPeinwVLRVDGHTDNVPLSGTGrFRDNWELSSARAISVVKFLIA-LGVP 306

                         90       100       110
                 ....*....|....*....|....*....|..
gi 515628177 266 HQRLRVRGMADTEPVEPNDTEWQRSLNRRVEI 297
Cdd:PRK09039 307 ADRLAAAGFGEFQPLDPGDTPEARARNRRIEL 338
MotB_plug pfam13677
Membrane MotB of proton-channel complex MotA/MotB; This is the MotB member of the E.coli MotA ...
 4-57 1.33e-18

Membrane MotB of proton-channel complex MotA/MotB; This is the MotB member of the E.coli MotA/MotB proton-channel complex that forms the stator of the bacterial membrane flagellar motor. Key residues act as a plug to prevent premature proton flow. The plug is in the periplasm just C-terminal to the MotB TM, consisting of an amphipathic alpha helix flanked by Pro-52 and Pro-65, eg in Swiss:D3V2T1. In addition to the Pro residues, Ile-58, Tyr-61, and Phe 62 are also essential for plug function.


Pssm-ID: 463955 [Multi-domain]  Cd Length: 57  Bit Score: 77.95  E-value: 1.33e-18
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 515628177    4 ENPCKCPPPGLPQWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAF 57
Cdd:pfam13677   4 KKEPEHEGGHGERWLVTYADLMTLLLAFFVLLYSMSSVDEKKFQQIAESFQDAF 57
OmpA pfam00691
OmpA family; The Pfam entry also includes MotB and related proteins which are not included in ...
 195-292 2.29e-15

OmpA family; The Pfam entry also includes MotB and related proteins which are not included in the Prosite family.


Pssm-ID: 425825 [Multi-domain]  Cd Length: 95  Bit Score: 70.47  E-value: 2.29e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177  195 FPSGSAFLQPKFRPLVRQVAELVK--DVPGIVRISGHTDnqRLDSElyRSNWDLSSQRAVSVAQEMEKvRGFSHQRLRVR 272
Cdd:pfam00691   1 FDPGSSQLTPKAKATLDEIADLLKfpELKNTITIEGHTD--TVGSA--AYNWELSQRRAEAVRRYLVN-FGVPPSRISVV 75

                          90       100
                  ....*....|....*....|
gi 515628177  273 GMADTEPVEPNDTEWQRSLN 292
Cdd:pfam00691  76 GYGATKPITDNKTPEGRARN 95
motB PRK08457
flagellar motor protein MotB; Reviewed
 165-297 3.28e-14

flagellar motor protein MotB; Reviewed


Pssm-ID: 181435 [Multi-domain]  Cd Length: 257  Bit Score: 71.29  E-value: 3.28e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 165 KALEREIDQGAIeVENLGQQIVIRIREKGAFPSGSAFL-QPKFRPLVRQVAELVKDVPGIVRIS--GHTDNQRLDSELYR 241
Cdd:PRK08457  97 ETIERRKGEGGA-LDQIDNGIALKLPSKLLFENGSAEIiNADMMDYLKRIAKIITKLPKQVKINvrGYTDNSPLNKSRYK 175

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 515628177 242 SNWDLSSQRAVSVAQEMEKvRGFSHQRLRVRGMADTEPVEPNDTEWQRSLNRRVEI 297
Cdd:PRK08457 176 DHYELAAARAYNVMKVLIQ-YGINPNRLSFSSYGSNNPIAPNDSLENRLKNNRVEI 230
motB PRK09041
motility protein MotB;
165-300 1.47e-13

motility protein MotB;


Pssm-ID: 236365 [Multi-domain]  Cd Length: 317  Bit Score: 69.97  E-value: 1.47e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 165 KALEREIDQgAIE----VENLGQQIVIRIREKG------------AFPSGSAFLQPKFRPLVRQVAELVKDVPGIVRISG 228
Cdd:PRK09041 120 EKLKQELDQ-AIEsnpkLRQFKPQLLIDLTQEGlriqivdsqnrpMFATGSAEVEPYMRDILREIAPVLNDVPNRISLSG 198

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 229 HTDN-QRLDSELYRSNWDLSSQRAVSVAQEM-------EKVrgfshqrLRVRGMADTEPVEPNDTewQRSLNRRVEISIM 300
Cdd:PRK09041 199 HTDAtPYANGEKGYSNWELSADRANASRRELvaggmdeGKV-------LRVVGLASTMLLDKKDP--LNPVNRRISIVVL 269
motB PRK05996
MotB family protein;
193-299 6.94e-12

MotB family protein;


Pssm-ID: 235665 [Multi-domain]  Cd Length: 423  Bit Score: 65.49  E-value: 6.94e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 193 GAFPSGSAFLQPKfrpLVR---QVAELVKDVPGIVRISGHTDNQRLDSELYrSNWDLSSQRAVSvAQEMeKVR-GFSHQR 268
Cdd:PRK05996 316 GMFAIGSAVPRAE---LVLameKIGQLLAERPGAVIIRGHTDARPFKSATY-DNWRLSTARAQS-AYYM-LVRgGLDEKR 389

                         90       100       110
                 ....*....|....*....|....*....|..
gi 515628177 269 -LRVRGMADTEPVEPNDTewQRSLNRRVEISI 299
Cdd:PRK05996 390 iEQVEGFADRRPKLPNDP--NAAANRRIEILI 419
PRK10510 PRK10510
OmpA family lipoprotein;
163-299 7.40e-12

OmpA family lipoprotein;


Pssm-ID: 182507 [Multi-domain]  Cd Length: 219  Bit Score: 63.74  E-value: 7.40e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 163 IKKALEREIDQG-AIEVENLGQQIVIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKDVPGI-VRISGHTDnqrldSELY 240
Cdd:PRK10510  83 VQEAKLRDKMRGtGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTaVNVVGYTD-----STGS 157

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 241 RS-NWDLSSQRAVSVAQEMeKVRGFSHQRLRVRGMADTEPVEPNDTEWQRSLNRRVEISI 299
Cdd:PRK10510 158 HDlNMRLSQQRADSVASAL-ITQGVDASRIRTQGMGPANPIASNSTAEGKAQNRRVEITL 216
PRK06778 PRK06778
hypothetical protein; Validated
 156-300 1.16e-11

hypothetical protein; Validated


Pssm-ID: 235860 [Multi-domain]  Cd Length: 289  Bit Score: 64.18  E-value: 1.16e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 156 METLMESIKKALEREIDQGAIEVENLGQQIVIRIRE---KGAFPSGSAFLQPKFRPLVRQVAELVKDVPGIVRISGHTDN 232
Cdd:PRK06778 114 LGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDdqnRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKIIITGHTDA 193

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 515628177 233 QRLDSELYrSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPVEPNDTewQRSLNRRVEISIM 300
Cdd:PRK06778 194 MAYKNNIY-NNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDAKNP--QSAGNRRIEIMVL 258
motB PRK12799
flagellar motor protein MotB; Reviewed
 176-300 1.27e-11

flagellar motor protein MotB; Reviewed


Pssm-ID: 183756 [Multi-domain]  Cd Length: 421  Bit Score: 64.74  E-value: 1.27e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 176 IEVENLGQQI-VIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKDVPGIVRISGHTDNQRLDS-ELYRSNWDLSSQRAVS 253
Cdd:PRK12799 140 INMMDEGLRIqIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARgERGYSNWELSADRANA 219

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 515628177 254 VAQEMEKVRGFSHQRLRVRGMADTEPVEPNDTEwqRSLNRRVEISIM 300
Cdd:PRK12799 220 SRRELLAGGLDEGKILRVVGMASTMRLKEQASD--DPVNRRISILVL 264
PRK07034 PRK07034
hypothetical protein; Provisional
 159-297 6.64e-11

hypothetical protein; Provisional


Pssm-ID: 168775 [Multi-domain]  Cd Length: 536  Bit Score: 62.88  E-value: 6.64e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 159 LMESIKKALEREIDQGAIEVENLGQQIVIRIREKGAFPSGSAFLQPKF--RPLVRQVAELVKDVPGIVRISGHTDNQRLD 236
Cdd:PRK07034 362 IMETLPNPLSNILNEGWLEVRKDPRGWLLIFTSDGAFRTGEATLSEEFinKKNIERLGLALAPWPGDIEVIGHTDNKPFR 441

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 515628177 237 SELYRSNWDLSSQRAVSVAQEMEKVRGF--SHQR-LRVRGMADTEPVEPNDTEWQRSLNRRVEI 297
Cdd:PRK07034 442 STSGNNNLKLSAARASVVADKLRESTQIneTHQReISAIGRGESDPLADNATEEGRKRNRRVDI 505
PRK09040 PRK09040
hypothetical protein; Provisional
 187-298 4.55e-09

hypothetical protein; Provisional


Pssm-ID: 181620 [Multi-domain]  Cd Length: 214  Bit Score: 55.41  E-value: 4.55e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 187 IRIREKGAFPSGSAFLQPKFRPLVRQVAELVKDVPG----IVRISGHTDNQRL--DSELYRSNWDLSSQRAVSVAQEMEK 260
Cdd:PRK09040  84 IGISGSVLFALNSDQLQPEGRELLKSLAGPLAAYLRardeILMVSGFTDDQPVraGNRRFADNWELSAQRALTVTRALID 163

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 515628177 261 vRGFSHQRLRVRGMADTEPVEPNDTEWQRSLNRRVEIS 298
Cdd:PRK09040 164 -AGVPASSVFAAAFGSEQPVASNADDEGRAKNRRVEIA 200
PRK09967 PRK09967
OmpA family protein;
195-299 9.72e-07

OmpA family protein;


Pssm-ID: 182172 [Multi-domain]  Cd Length: 160  Bit Score: 48.05  E-value: 9.72e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 195 FPSGSAFLQPKFRPLVRQVAELVKDVpGI--VRISGHTDNQRLDSelyrSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVR 272
Cdd:PRK09967  56 FAKNDYKLLPESQQQIQTMAAKLAST-GLthARMDGHTDNYGEDS----YNEGLSLKRANVVADAWAMGGQIPRSNLTTQ 130

                         90       100
                 ....*....|....*....|....*..
gi 515628177 273 GMADTEPVEPNDTEWQRSLNRRVEISI 299
Cdd:PRK09967 131 GLGKKYPIASNKTAQGRAENRRVAVVI 157
PRK14693 PRK14693
hypothetical protein; Provisional
 159-297 2.28e-06

hypothetical protein; Provisional


Pssm-ID: 173156 [Multi-domain]  Cd Length: 552  Bit Score: 48.99  E-value: 2.28e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 159 LMESIKKALEREIDQGAIEVENLGQQIVIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKDVPGIVRISGHTDNQRLDSE 238
Cdd:PRK14693 340 IAETLPPPLPQILTEGWLTAYKHPQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPGDLEVIGHTDSRPIRTS 419

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 515628177 239 LYRSNWDLSSQRAVSVAQEMEKV---------RGFSHQRLRVRGMADTEPVEPNDTEWQRSLNRRVEI 297
Cdd:PRK14693 420 EFPDNQALSEARARNVADELRKTalpggarapENAVQRNIEYSGRGDAQPIDTAKTAAAYERNRRVDV 487
PRK10808 PRK10808
outer membrane protein A; Reviewed
 222-299 3.80e-03

outer membrane protein A; Reviewed


Pssm-ID: 236764 [Multi-domain]  Cd Length: 351  Bit Score: 38.52  E-value: 3.80e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515628177 222 GIVRISGHTDnqRLDSELYrsNWDLSSQRAVSVAQEMEKvRGFSHQRLRVRGMADTEPVEPN--DTEWQRSL-------N 292
Cdd:PRK10808 258 GSVVVLGYTD--RIGSDAY--NQGLSEKRAQSVVDYLVS-KGIPADKISARGMGKSNPVTGNtcDNVKPRAAlidclapD 332


                 ....*..
gi 515628177 293 RRVEISI 299
Cdd:PRK10808 333 RRVEIEV 339
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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