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Conserved domains on  [gi|515632005|ref|WP_017064605|]
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MULTISPECIES: DUF3389 domain-containing protein [Vibrio]

Protein Classification

DUF3389 domain-containing protein( domain architecture ID 10570902)

DUF3389 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3389 pfam11869
Protein of unknown function (DUF3389); This family of proteins are functionally ...
 1-76 4.57e-36

Protein of unknown function (DUF3389); This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 80 amino acids in length.


:

Pssm-ID: 432146  Cd Length: 75  Bit Score: 116.25  E-value: 4.57e-36
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 515632005   1 MVITFKSGKVIATAHELVVRLDGEHRVTLQAQVDAIQLIGkGANVISANGSECKWSIKLDDEQQLREIANEIGCDV 76
Cdd:pfam11869  1 MVIDFSQGKIIATQHEIVIRLNGSARVTLQAQVDAISLIG-GANVITADGGGVKWSLKLDNEEQLEALAEELGIDI 75
 
Name Accession Description Interval E-value
DUF3389 pfam11869
Protein of unknown function (DUF3389); This family of proteins are functionally ...
 1-76 4.57e-36

Protein of unknown function (DUF3389); This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 80 amino acids in length.


Pssm-ID: 432146  Cd Length: 75  Bit Score: 116.25  E-value: 4.57e-36
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 515632005   1 MVITFKSGKVIATAHELVVRLDGEHRVTLQAQVDAIQLIGkGANVISANGSECKWSIKLDDEQQLREIANEIGCDV 76
Cdd:pfam11869  1 MVIDFSQGKIIATQHEIVIRLNGSARVTLQAQVDAISLIG-GANVITADGGGVKWSLKLDNEEQLEALAEELGIDI 75
 
Name Accession Description Interval E-value
DUF3389 pfam11869
Protein of unknown function (DUF3389); This family of proteins are functionally ...
 1-76 4.57e-36

Protein of unknown function (DUF3389); This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 80 amino acids in length.


Pssm-ID: 432146  Cd Length: 75  Bit Score: 116.25  E-value: 4.57e-36
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 515632005   1 MVITFKSGKVIATAHELVVRLDGEHRVTLQAQVDAIQLIGkGANVISANGSECKWSIKLDDEQQLREIANEIGCDV 76
Cdd:pfam11869  1 MVIDFSQGKIIATQHEIVIRLNGSARVTLQAQVDAISLIG-GANVITADGGGVKWSLKLDNEEQLEALAEELGIDI 75
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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