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Concise Results
Standard Results
Full Results
MULTISPECIES: BCCT family transporter [Vibrio]
Protein Classification
BCCT family transporter ( domain architecture ID 10488420 )
BCCT (betaine-carnitine-choline transporter) family transporter shares the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]; energized by pmf-driven proton symport
List of domain hits
Name
Accession
Description
Interval
E-value
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
37-520
1.09e-166
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 480.88
E-value: 1.09e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 37 VF WL S GSFLTL FV V L AFTNTSV LS EL VN IGFSYS T KW FG A F WQV L L L LNFIIG L V LA LG R T G HV RLG T - LAL PE MT TF K W 115
Cdd:pfam02028 1 VF AV S AGLILA FV L L GLIFPEA LS AV VN TALDWI T DN FG W F YLL L V L IFLVFA L F LA FS R Y G NI RLG G d DDK PE FS TF S W 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 116 MSIVLCTLLAG G G VFW AA AEP IA H FV S A PP L y G NADPQAM A FN A LSQS F M HWG FL AWAI LG g L SSIV L MHLH Y D KGLPL K 195
Cdd:pfam02028 81 FAMLFAAGMGI G L VFW GV AEP LS H YL S P PP G - G EPGTPEA A QQ A MAYT F F HWG LH AWAI YA - L VALA L AYFA Y R KGLPL L 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 196 PRTL LYP V LGD K a I NSW IG NVV D ACS I V A VAA G TIGPI G FLG LQI SYA LS E LFGI SDSFA TQ SVV I VFAI A MY T L SA L SG 275
Cdd:pfam02028 159 ISSA LYP L LGD R - I DGP IG KAI D ILA I I A TVF G VATSL G LGA LQI NAG LS Y LFGI PNTLT TQ LAI I AIIT A LF T I SA V SG 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 276 VN KGI QLV S RY N II L S V C L IGYI L LV GPT S FI IDGYL Q GM G EMVD NF I PM AL Y R ---- QDTA WLGGWT V F F W G W FLGYG P 351
Cdd:pfam02028 238 LD KGI KRL S NL N MY L A V A L LLFV L IA GPT L FI LNTFV Q SL G DYLQ NF V PM SF Y T dpfg DTGG WLGGWT I F Y W A W WIAWA P 317
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 352 MMAI FIARISRGRTIR QM I VSISI V AP L V T CF WFS IV GG SGLAF EL EN PG VISS A f EGFNL PA V L L A ITA QLP FP T LIAI 431
Cdd:pfam02028 318 FVGM FIARISRGRTIR EF I LGVLL V PT L F T FL WFS VF GG TAIYL EL NG PG DLAD A - VEAGP PA A L F A LLE QLP LG T ILSV 396
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 432 L F L I L TTT F I VT TG DS M T YT I SVVMT - G TTE P NAAV R T FWG IIM GAVA IA L IS mg S GG IS ALQS FIV I T A V P V SFILL PC 510
Cdd:pfam02028 397 L A L L L III F F VT SA DS G T LV I AMLSS g G DLN P PRWQ R V FWG VLL GAVA AV L LL -- A GG LE ALQS ASI I A A L P F SFILL LM 474
490
....*....|
gi 515659248 511 LWHAP K IAKQ 520
Cdd:pfam02028 475 CISLF K ALRE 484
Name
Accession
Description
Interval
E-value
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
37-520
1.09e-166
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 480.88
E-value: 1.09e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 37 VF WL S GSFLTL FV V L AFTNTSV LS EL VN IGFSYS T KW FG A F WQV L L L LNFIIG L V LA LG R T G HV RLG T - LAL PE MT TF K W 115
Cdd:pfam02028 1 VF AV S AGLILA FV L L GLIFPEA LS AV VN TALDWI T DN FG W F YLL L V L IFLVFA L F LA FS R Y G NI RLG G d DDK PE FS TF S W 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 116 MSIVLCTLLAG G G VFW AA AEP IA H FV S A PP L y G NADPQAM A FN A LSQS F M HWG FL AWAI LG g L SSIV L MHLH Y D KGLPL K 195
Cdd:pfam02028 81 FAMLFAAGMGI G L VFW GV AEP LS H YL S P PP G - G EPGTPEA A QQ A MAYT F F HWG LH AWAI YA - L VALA L AYFA Y R KGLPL L 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 196 PRTL LYP V LGD K a I NSW IG NVV D ACS I V A VAA G TIGPI G FLG LQI SYA LS E LFGI SDSFA TQ SVV I VFAI A MY T L SA L SG 275
Cdd:pfam02028 159 ISSA LYP L LGD R - I DGP IG KAI D ILA I I A TVF G VATSL G LGA LQI NAG LS Y LFGI PNTLT TQ LAI I AIIT A LF T I SA V SG 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 276 VN KGI QLV S RY N II L S V C L IGYI L LV GPT S FI IDGYL Q GM G EMVD NF I PM AL Y R ---- QDTA WLGGWT V F F W G W FLGYG P 351
Cdd:pfam02028 238 LD KGI KRL S NL N MY L A V A L LLFV L IA GPT L FI LNTFV Q SL G DYLQ NF V PM SF Y T dpfg DTGG WLGGWT I F Y W A W WIAWA P 317
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 352 MMAI FIARISRGRTIR QM I VSISI V AP L V T CF WFS IV GG SGLAF EL EN PG VISS A f EGFNL PA V L L A ITA QLP FP T LIAI 431
Cdd:pfam02028 318 FVGM FIARISRGRTIR EF I LGVLL V PT L F T FL WFS VF GG TAIYL EL NG PG DLAD A - VEAGP PA A L F A LLE QLP LG T ILSV 396
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 432 L F L I L TTT F I VT TG DS M T YT I SVVMT - G TTE P NAAV R T FWG IIM GAVA IA L IS mg S GG IS ALQS FIV I T A V P V SFILL PC 510
Cdd:pfam02028 397 L A L L L III F F VT SA DS G T LV I AMLSS g G DLN P PRWQ R V FWG VLL GAVA AV L LL -- A GG LE ALQS ASI I A A L P F SFILL LM 474
490
....*....|
gi 515659248 511 LWHAP K IAKQ 520
Cdd:pfam02028 475 CISLF K ALRE 484
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
28-520
5.90e-166
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 480.03
E-value: 5.90e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 28 GE K LELGN PVF WL S GSFLTL FV VLAFTNTSVLSELV N IG FS YS T KW FG A F WQV L L LL NFIIG L V LA LGRT G HV RLG TL - A 106
Cdd:COG1292 8 KF K KKIDP PVF IP S ALLILA FV LWGLLFPEAAGAVL N AA FS WI T TN FG W F YLL L V LL FVVFC L Y LA FSKY G KI RLG GD d A 87
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 107 L PE MT TF K W MSIVLCTLLAG G G VFW AA AEP IA HF V S A PP LYGNAD P Q A MAF n A LSQS F M HWG FL AWAI LG g L SSIV L MHL 186
Cdd:COG1292 88 K PE FS TF S W FAMLFSAGMGI G L VFW GV AEP LY HF L S P PP GVEPGS P E A ARW - A MAYT F F HWG LH AWAI YA - L VGLA L AYF 165
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 187 H Y DK GLPL KPRTL LYP V LGD K a I NSW IG N V V D ACSIV A VAA G TIGPI G FLG LQI SYA L SE LFGI SD S FAT Q SVV I VFAI A 266
Cdd:COG1292 166 A Y RR GLPL TISSA LYP L LGD R - I YGP IG K V I D ILAVF A TVF G VATSL G LGA LQI NAG L NY LFGI PN S LTV Q III I AVIT A 244
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 267 MY T L SA L SG VN KGI QLV S RY N II L SVC L IGYI L L VGPT S FI IDGYL Q GM G EMVD NF I PM A L YR --- Q DT A WLGGWTVF F W 343
Cdd:COG1292 245 LF T I SA V SG LD KGI KRL S NL N MV L ALL L LLFV L I VGPT L FI LNLFV Q SL G DYLQ NF V PM S L WT day G DT G WLGGWTVF Y W 324
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 344 G W FLGYG P MMAI FIARISRGRTIR QMIVSISI V AP L V T CF WFS IV GG SGLAF EL ENP G VISS A FEG f NLP A V L L A ITA QL 423
Cdd:COG1292 325 A W WIAWA P FVGL FIARISRGRTIR EFVLGVLL V PT L F T FL WFS VF GG TAIHL EL NGG G DLAE A VAA - GVE A A L F A LLE QL 403
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 424 P FP T LIAI L FL IL TTT F I VT TG DS MTYTISVVMT - G TT EP NAAV R T FWG IIM G A VA IA L IS mg S GG I SALQ SFIV ITA V P 502
Cdd:COG1292 404 P LG T ILSV L AI IL VII F F VT SA DS GSLVLAMLTS g G DE EP PRWQ R I FWG VLI G L VA AV L LL -- A GG L SALQ TASI ITA L P 481
490
....*....|....*...
gi 515659248 503 V SF I LL PCLWHAP K IAKQ 520
Cdd:COG1292 482 F SF V LL LMCVSLV K ALRE 499
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
78-508
1.04e-91
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 287.71
E-value: 1.04e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 78 WQ V L L L L N F I ig L VL A LG R T G HV RLG - TLAL PE MT T FK W MSIVLCTLLAG G GV FW AA AEP IAHFVSA P PLY G NADPQ A MA 156
Cdd:TIGR00842 6 LT V T L F L G F V -- L YI A FS R Y G KI RLG r DDEK PE FS T LS W LAMLFAAGMGA G LM FW GV AEP LTYYLTP P FGA G PTSTT A QE 83
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 157 F n AL SQSFM HWG FLA WAI LG g L SSIV L MHL H YD KGLPL KPRTL L Y P V LG D K a I N SW IG NVV D ACSI VA VAA G TIGPI G FL 236
Cdd:TIGR00842 84 Q - AL AYTLF HWG IHP WAI YA - L VGLA L AYF H FR KGLPL RLSSA L V P L LG E K - V N GP IG KAI D ILAL VA TVF G VATSL G LG 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 237 GL QI SYA LS E LFGI S DSF AT Q SVV I VFAI A MYTL S AL SGV N KGI QLV S RY N II L SVC L IGYI L L VGPT S F IIDGYLQGM G 316
Cdd:TIGR00842 161 AP QI NAG LS A LFGI P DSF WL Q ALI I LCVT A LACI S VA SGV G KGI KIL S NI N MA L AFL L LLFV L I VGPT V F LLNSFVDSI G 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 317 EMVD NF IP M ALYR ---- QDTA W L GGWTVF F W G W FLGYG P MMAI FIARISRGRTIR QM I VSISIVAPLV T CF WFS IV G G S G 392
Cdd:TIGR00842 241 NYLQ NF PQ M SFRT dpdd GKGG W P GGWTVF Y W A W WISWS P FVGM FIARISRGRTIR EF I FGVLLGPTAF T WL WFS VF G N S A 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 393 L AFELENPGVISSAFEGF N LPAV L LAIT A Q LP FP T LIAI L F LIL TTT F IV T TG DS MTYTISVVMTGT ---- T EP NAA VR T 468
Cdd:TIGR00842 321 L LLQQNGGFINGPFVVET N GARA L FGLL A A LP LG T ITMA L A LIL III F FI T SA DS ASLVLANTTSRG gqlg E EP PKW VR V 400
410 420 430 440
....*....|....*....|....*....|....*....|
gi 515659248 469 FW GIIM G AV A IA L ISM G s G GIS ALQ SFIV I T A V P V SF IL L 508
Cdd:TIGR00842 401 FW AVAI G LI A LV L LFS G - G SLA ALQ TTTI I A A L P F SF VM L 439
PRK09928
PRK09928 choline transport protein BetT; Provisional
29-508
1.12e-76
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 254.62
E-value: 1.12e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 29 EK LELGNP VF WL S GSFLT LF VVLAFTN T SVLSELV N IGFSYST K W FG AFW -- QVL L LLN F I I GL vl A LG R T G HVR LG - TL 105
Cdd:PRK09928 11 EK DRINPV VF YT S AGLIL LF SLTTILF T DFSNRWI N RTLNWVS K T FG WYY ll AAT L YIV F V I FI -- A CS R F G SIK LG p EQ 88
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 106 AL PE MTTFK W MSIVLC tll AG G G V --- F WAA AEP IAHFVSA P P ly G NADPQAM A FN A LSQSFM H W G FLA W AILG g L SSIV 182
Cdd:PRK09928 89 SK PE FSLLS W AAMLFA --- AG I G I dlm F FSV AEP VTQYMQP P E -- G AGQTIEA A RQ A MVWTLF H Y G LTG W SMYA - L MGMA 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 183 L MHLH Y DKG LPL KP R TL LYP VL G d K A IN SW IG NV VD ACSIVAVAA G TIGPI G FLGL Q IS Y A LS E LF G I SD S F A T Q SVV I V 262
Cdd:PRK09928 163 L GYFS Y RYN LPL TI R SA LYP IF G - K R IN GP IG HS VD IAAVIGTIF G IATTL G IGVV Q LN Y G LS V LF D I PE S L A A Q AAL I A 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 263 FAIAMY T L S AL SGVNKGI QLV S RY N II L SVC LI GYI L LV G P TSF IIDGYLQGM G EM V DN F IP M A L ---- YRQD T A W LGG W 338
Cdd:PRK09928 242 LSVIIA T I S VT SGVNKGI RVL S EL N VL L ALG LI LFV L FM G D TSF LLNALVLNV G DY V NR F MG M T L nsfa FDRP T E W MNN W 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 339 T V FFW G W FLGYG P MMAI F I ARISRGRTIRQ MIVSIS I VAPLV T CF W F SI V G G S G L AFELE np G VISS A F E GFNL P AV - LL 417
Cdd:PRK09928 322 T L FFW A W WVAWS P FVGL F L ARISRGRTIRQ FVLGTL I IPFTF T LL W L SI F G N S A L YEIIH -- G NAAF A E E AMAH P ER g FY 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 418 AIT AQ L P FP T LI A ILFL I LTTT F I VT TG DS MTYTISVVMTGTTEP N AA ---- V R T FW GIIM G AVAIALIS mg SG GISALQ 493
Cdd:PRK09928 400 SLL AQ Y P AF T FS A SVAT I TGLL F Y VT SA DS GALVLGNFTSKLKDI N SD apnw L R V FW SVAI G LLTLGMLM -- TN GISALQ 477
490
....*....|....*
gi 515659248 494 SFI VI TAV P V SF ILL 508
Cdd:PRK09928 478 NTT VI MGL P F SF VIF 492
Name
Accession
Description
Interval
E-value
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
37-520
1.09e-166
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 480.88
E-value: 1.09e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 37 VF WL S GSFLTL FV V L AFTNTSV LS EL VN IGFSYS T KW FG A F WQV L L L LNFIIG L V LA LG R T G HV RLG T - LAL PE MT TF K W 115
Cdd:pfam02028 1 VF AV S AGLILA FV L L GLIFPEA LS AV VN TALDWI T DN FG W F YLL L V L IFLVFA L F LA FS R Y G NI RLG G d DDK PE FS TF S W 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 116 MSIVLCTLLAG G G VFW AA AEP IA H FV S A PP L y G NADPQAM A FN A LSQS F M HWG FL AWAI LG g L SSIV L MHLH Y D KGLPL K 195
Cdd:pfam02028 81 FAMLFAAGMGI G L VFW GV AEP LS H YL S P PP G - G EPGTPEA A QQ A MAYT F F HWG LH AWAI YA - L VALA L AYFA Y R KGLPL L 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 196 PRTL LYP V LGD K a I NSW IG NVV D ACS I V A VAA G TIGPI G FLG LQI SYA LS E LFGI SDSFA TQ SVV I VFAI A MY T L SA L SG 275
Cdd:pfam02028 159 ISSA LYP L LGD R - I DGP IG KAI D ILA I I A TVF G VATSL G LGA LQI NAG LS Y LFGI PNTLT TQ LAI I AIIT A LF T I SA V SG 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 276 VN KGI QLV S RY N II L S V C L IGYI L LV GPT S FI IDGYL Q GM G EMVD NF I PM AL Y R ---- QDTA WLGGWT V F F W G W FLGYG P 351
Cdd:pfam02028 238 LD KGI KRL S NL N MY L A V A L LLFV L IA GPT L FI LNTFV Q SL G DYLQ NF V PM SF Y T dpfg DTGG WLGGWT I F Y W A W WIAWA P 317
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 352 MMAI FIARISRGRTIR QM I VSISI V AP L V T CF WFS IV GG SGLAF EL EN PG VISS A f EGFNL PA V L L A ITA QLP FP T LIAI 431
Cdd:pfam02028 318 FVGM FIARISRGRTIR EF I LGVLL V PT L F T FL WFS VF GG TAIYL EL NG PG DLAD A - VEAGP PA A L F A LLE QLP LG T ILSV 396
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 432 L F L I L TTT F I VT TG DS M T YT I SVVMT - G TTE P NAAV R T FWG IIM GAVA IA L IS mg S GG IS ALQS FIV I T A V P V SFILL PC 510
Cdd:pfam02028 397 L A L L L III F F VT SA DS G T LV I AMLSS g G DLN P PRWQ R V FWG VLL GAVA AV L LL -- A GG LE ALQS ASI I A A L P F SFILL LM 474
490
....*....|
gi 515659248 511 LWHAP K IAKQ 520
Cdd:pfam02028 475 CISLF K ALRE 484
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
28-520
5.90e-166
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 480.03
E-value: 5.90e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 28 GE K LELGN PVF WL S GSFLTL FV VLAFTNTSVLSELV N IG FS YS T KW FG A F WQV L L LL NFIIG L V LA LGRT G HV RLG TL - A 106
Cdd:COG1292 8 KF K KKIDP PVF IP S ALLILA FV LWGLLFPEAAGAVL N AA FS WI T TN FG W F YLL L V LL FVVFC L Y LA FSKY G KI RLG GD d A 87
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 107 L PE MT TF K W MSIVLCTLLAG G G VFW AA AEP IA HF V S A PP LYGNAD P Q A MAF n A LSQS F M HWG FL AWAI LG g L SSIV L MHL 186
Cdd:COG1292 88 K PE FS TF S W FAMLFSAGMGI G L VFW GV AEP LY HF L S P PP GVEPGS P E A ARW - A MAYT F F HWG LH AWAI YA - L VGLA L AYF 165
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 187 H Y DK GLPL KPRTL LYP V LGD K a I NSW IG N V V D ACSIV A VAA G TIGPI G FLG LQI SYA L SE LFGI SD S FAT Q SVV I VFAI A 266
Cdd:COG1292 166 A Y RR GLPL TISSA LYP L LGD R - I YGP IG K V I D ILAVF A TVF G VATSL G LGA LQI NAG L NY LFGI PN S LTV Q III I AVIT A 244
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 267 MY T L SA L SG VN KGI QLV S RY N II L SVC L IGYI L L VGPT S FI IDGYL Q GM G EMVD NF I PM A L YR --- Q DT A WLGGWTVF F W 343
Cdd:COG1292 245 LF T I SA V SG LD KGI KRL S NL N MV L ALL L LLFV L I VGPT L FI LNLFV Q SL G DYLQ NF V PM S L WT day G DT G WLGGWTVF Y W 324
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 344 G W FLGYG P MMAI FIARISRGRTIR QMIVSISI V AP L V T CF WFS IV GG SGLAF EL ENP G VISS A FEG f NLP A V L L A ITA QL 423
Cdd:COG1292 325 A W WIAWA P FVGL FIARISRGRTIR EFVLGVLL V PT L F T FL WFS VF GG TAIHL EL NGG G DLAE A VAA - GVE A A L F A LLE QL 403
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 424 P FP T LIAI L FL IL TTT F I VT TG DS MTYTISVVMT - G TT EP NAAV R T FWG IIM G A VA IA L IS mg S GG I SALQ SFIV ITA V P 502
Cdd:COG1292 404 P LG T ILSV L AI IL VII F F VT SA DS GSLVLAMLTS g G DE EP PRWQ R I FWG VLI G L VA AV L LL -- A GG L SALQ TASI ITA L P 481
490
....*....|....*...
gi 515659248 503 V SF I LL PCLWHAP K IAKQ 520
Cdd:COG1292 482 F SF V LL LMCVSLV K ALRE 499
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
78-508
1.04e-91
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 287.71
E-value: 1.04e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 78 WQ V L L L L N F I ig L VL A LG R T G HV RLG - TLAL PE MT T FK W MSIVLCTLLAG G GV FW AA AEP IAHFVSA P PLY G NADPQ A MA 156
Cdd:TIGR00842 6 LT V T L F L G F V -- L YI A FS R Y G KI RLG r DDEK PE FS T LS W LAMLFAAGMGA G LM FW GV AEP LTYYLTP P FGA G PTSTT A QE 83
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 157 F n AL SQSFM HWG FLA WAI LG g L SSIV L MHL H YD KGLPL KPRTL L Y P V LG D K a I N SW IG NVV D ACSI VA VAA G TIGPI G FL 236
Cdd:TIGR00842 84 Q - AL AYTLF HWG IHP WAI YA - L VGLA L AYF H FR KGLPL RLSSA L V P L LG E K - V N GP IG KAI D ILAL VA TVF G VATSL G LG 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 237 GL QI SYA LS E LFGI S DSF AT Q SVV I VFAI A MYTL S AL SGV N KGI QLV S RY N II L SVC L IGYI L L VGPT S F IIDGYLQGM G 316
Cdd:TIGR00842 161 AP QI NAG LS A LFGI P DSF WL Q ALI I LCVT A LACI S VA SGV G KGI KIL S NI N MA L AFL L LLFV L I VGPT V F LLNSFVDSI G 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 317 EMVD NF IP M ALYR ---- QDTA W L GGWTVF F W G W FLGYG P MMAI FIARISRGRTIR QM I VSISIVAPLV T CF WFS IV G G S G 392
Cdd:TIGR00842 241 NYLQ NF PQ M SFRT dpdd GKGG W P GGWTVF Y W A W WISWS P FVGM FIARISRGRTIR EF I FGVLLGPTAF T WL WFS VF G N S A 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 393 L AFELENPGVISSAFEGF N LPAV L LAIT A Q LP FP T LIAI L F LIL TTT F IV T TG DS MTYTISVVMTGT ---- T EP NAA VR T 468
Cdd:TIGR00842 321 L LLQQNGGFINGPFVVET N GARA L FGLL A A LP LG T ITMA L A LIL III F FI T SA DS ASLVLANTTSRG gqlg E EP PKW VR V 400
410 420 430 440
....*....|....*....|....*....|....*....|
gi 515659248 469 FW GIIM G AV A IA L ISM G s G GIS ALQ SFIV I T A V P V SF IL L 508
Cdd:TIGR00842 401 FW AVAI G LI A LV L LFS G - G SLA ALQ TTTI I A A L P F SF VM L 439
PRK09928
PRK09928 choline transport protein BetT; Provisional
29-508
1.12e-76
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 254.62
E-value: 1.12e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 29 EK LELGNP VF WL S GSFLT LF VVLAFTN T SVLSELV N IGFSYST K W FG AFW -- QVL L LLN F I I GL vl A LG R T G HVR LG - TL 105
Cdd:PRK09928 11 EK DRINPV VF YT S AGLIL LF SLTTILF T DFSNRWI N RTLNWVS K T FG WYY ll AAT L YIV F V I FI -- A CS R F G SIK LG p EQ 88
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 106 AL PE MTTFK W MSIVLC tll AG G G V --- F WAA AEP IAHFVSA P P ly G NADPQAM A FN A LSQSFM H W G FLA W AILG g L SSIV 182
Cdd:PRK09928 89 SK PE FSLLS W AAMLFA --- AG I G I dlm F FSV AEP VTQYMQP P E -- G AGQTIEA A RQ A MVWTLF H Y G LTG W SMYA - L MGMA 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 183 L MHLH Y DKG LPL KP R TL LYP VL G d K A IN SW IG NV VD ACSIVAVAA G TIGPI G FLGL Q IS Y A LS E LF G I SD S F A T Q SVV I V 262
Cdd:PRK09928 163 L GYFS Y RYN LPL TI R SA LYP IF G - K R IN GP IG HS VD IAAVIGTIF G IATTL G IGVV Q LN Y G LS V LF D I PE S L A A Q AAL I A 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 263 FAIAMY T L S AL SGVNKGI QLV S RY N II L SVC LI GYI L LV G P TSF IIDGYLQGM G EM V DN F IP M A L ---- YRQD T A W LGG W 338
Cdd:PRK09928 242 LSVIIA T I S VT SGVNKGI RVL S EL N VL L ALG LI LFV L FM G D TSF LLNALVLNV G DY V NR F MG M T L nsfa FDRP T E W MNN W 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 339 T V FFW G W FLGYG P MMAI F I ARISRGRTIRQ MIVSIS I VAPLV T CF W F SI V G G S G L AFELE np G VISS A F E GFNL P AV - LL 417
Cdd:PRK09928 322 T L FFW A W WVAWS P FVGL F L ARISRGRTIRQ FVLGTL I IPFTF T LL W L SI F G N S A L YEIIH -- G NAAF A E E AMAH P ER g FY 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 418 AIT AQ L P FP T LI A ILFL I LTTT F I VT TG DS MTYTISVVMTGTTEP N AA ---- V R T FW GIIM G AVAIALIS mg SG GISALQ 493
Cdd:PRK09928 400 SLL AQ Y P AF T FS A SVAT I TGLL F Y VT SA DS GALVLGNFTSKLKDI N SD apnw L R V FW SVAI G LLTLGMLM -- TN GISALQ 477
490
....*....|....*
gi 515659248 494 SFI VI TAV P V SF ILL 508
Cdd:PRK09928 478 NTT VI MGL P F SF VIF 492
PRK03356
PRK03356 L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
30-506
1.78e-53
L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
Pssm-ID: 179568
Cd Length: 504
Bit Score: 188.79
E-value: 1.78e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 30 K LELGNP VF WLSGSFLTLFVV L AFTNTSVLSELV N IG FSY S T KWF G AFWQVLLLLNFIIGLV L AL G RTGHV RLG TLA l PE 109
Cdd:PRK03356 7 K TGIEPK VF FPPLIIVGILCW L TVRDLDAANVVI N AV FSY V T NVW G WAFEWYMVVMLFGWFW L VF G PYAKK RLG DEK - PE 85
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 110 MT T FK W MSIVLCTLLAGGGV FW AAA E p I AHFV S A PP LYGNADPQAMAFNA L SQ S FM HWG F L A WA ILGG LS SIVLMHLHYD 189
Cdd:PRK03356 86 FS T AS W IFMMFASCTSAAVL FW GSI E - I YYYI S T PP FGLEPNSTGAKELG L AY S LF HWG P L P WA TYSF LS VAFGYFFFVR 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 190 K GLPLK P RTL L Y P VL G D K AINSWI G NV VD ACSI VA VAAGTIGPI G FLGLQISYALSE LFGI SDSFATQSVV I VFA I AMYT 269
Cdd:PRK03356 165 K MDVIR P SST L V P LV G E K HAKGLF G TI VD NFYL VA LIFAMGTSL G LATPLVTECMQW LFGI PHTLQLDAII I TCW I ILNA 244
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 270 LSALS G VN KG IQLV S RYNII LS VCLI G YILL VG P TSFI IDGYLQGM G EMVDNFIP M AL Y RQ --- DTAWLG GWTVF F W G W F 346
Cdd:PRK03356 245 ICVAC G LQ KG VRIA S DVRSY LS FLML G WVFI VG G TSFI MNYFTDSV G MLLMYLPR M LF Y TD pig KGGFPQ GWTVF Y W A W W 324
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 347 LG Y GPM M A IF I ARISRGRT I R QMIVSISIVAPLV T CFWFSIV G GSG L AFELE N PGV I SSAF E GFNLPAVLLAIT A Q LP FP 426
Cdd:PRK03356 325 VI Y AIQ M S IF L ARISRGRT V R ELCFGMVLGLTAS T WILWTVL G SNT L LLMDK N IIN I PNLI E QYGVARAIIETW A A LP LS 404
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 427 T LIAIL F L IL TTTFI VT TGDSMT YT ISVV ---- MTGTT EP NAA VR TF W G I IM G AVA I A L ISM gs GG ISAL Q SF I VITAV P 502
Cdd:PRK03356 405 T ATMWG F F IL CFIAT VT LINACS YT LAMS tcre VRDGE EP PLL VR IG W S I LV G IIG I V L LAL -- GG LKPI Q TA I IAGGC P 482
....
gi 515659248 503 VS F I 506
Cdd:PRK03356 483 LF F V 486
PRK09950
PRK09950 putative transporter; Provisional
67-520
1.49e-51
putative transporter; Provisional
Pssm-ID: 236636
Cd Length: 506
Bit Score: 183.45
E-value: 1.49e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 67 F SYS T KW FG AFW Q VLL LL NF I IG L V LA LGRT G HV RLG T l AL PE MT T FK W MSIVL C TL L AGGGVF W AAA E p I A HFVSA P P L 146
Cdd:PRK09950 42 F QWV T RT FG SPV Q LFV LL AM I LV L Y LA TSKY G NI RLG E - GK PE YS T LS W LFMFI C AG L GSSTLY W GVM E - W A YYYQT P G L 119
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 147 - YGNAD P Q A MAF n AL S Q SF M HWG FL AWA ILGGL S S I VLM H L H YD K GLP L KPRTLLYPVL G D K AINS W i G NV VD ACSIV A V 225
Cdd:PRK09950 120 n IAPRS P K A LEY - SV S Y SF F HWG IS AWA TYALA S L I MAY H F H VR K NKG L SLSGIIAAIT G V K PQGP W - G RL VD LMFLI A T 197
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 226 AAGTIGPIGFLGLQISYA LS E L F G ISDS F AT Q SV VI VFAIAMYT LS ALS G VNK G I Q LV S RYNIILSVCLIGYI L L VGPT S 305
Cdd:PRK09950 198 VGALTISLVVTAATFTRG LS A L T G LPNN F TV Q AF VI LLSGVIFC LS SYI G IDN G L Q RL S KMVGWGAFLFALLV L I VGPT E 277
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 306 FI IDGYLQGM G EMVD NF IP M A L YRQ --- D TAWLGG WTVF F W G W FLG Y G P MM A I F IA R I SRGR T I RQM I VSISIVAPLVTC 382
Cdd:PRK09950 278 FI TNNIINSI G LTTQ NF LQ M S L FTD pmg D GSFTRN WTVF Y W L W WIS Y T P GV A M F VT R V SRGR K I KEV I WGLILGSSVGCW 357
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515659248 383 F W F SI vggsglafe LE NPGVISSAFEGF N L P AV L LAIT --------- AQ LP FPT L IAILF L ILTTT F IVTTG D SMT YT IS 453
Cdd:PRK09950 358 F F F GV --------- LE SYAIHQFINGVI N V P QI L NTLG getavqqll SS LP AGK L FLAAY L GIMII F LASHM D AVA YT MA 428
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 515659248 454 VVM T GT ---- TE P NAAV R T FW GIIMGAVAIALISM G S g GISALQSFI V I TA V P VSF ILL PCLWHAPKIA KQ 520
Cdd:PRK09950 429 ATS T RN lreg DD P DRGL R L FW CVVITLIPLSILFT G A - SLDTMKTTV V L TA L P FLV ILL IKVYGFIRWL KQ 498
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
