NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|515674114|ref|WP_017106714|]
View 

MULTISPECIES: SulA-like leucine-rich domain-containing protein [Vibrio]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
SulA super family cl46042
Cell division inhibitor SulA, prevents FtsZ ring assembly [Cell cycle control, cell division, ...
 41-127 1.44e-17

Cell division inhibitor SulA, prevents FtsZ ring assembly [Cell cycle control, cell division, chromosome partitioning];


The actual alignment was detected with superfamily member COG5404:

Pssm-ID: 480382  Cd Length: 152  Bit Score: 73.86  E-value: 1.44e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515674114  41 LSNQHQWLLFTAQTPRPSAKQLKQHNVCCERVIHMKASNQMNEVETVEKAIRSGNASAIVASTS-IDSFSQQYLRTLGQR 119
Cdd:COG5404   56 LSQQSRWLLWLAPPQKLSRSWLQSAGLPLSKVLQLHPKSPENTLEAMEKALRSGNSSAVVAWLPeLSEEDRQRLQQAAQR 135


                 ....*...
gi 515674114 120 FQCEVFFI 127
Cdd:COG5404  136 GNALGFIM 143
 
Name Accession Description Interval E-value
SulA COG5404
Cell division inhibitor SulA, prevents FtsZ ring assembly [Cell cycle control, cell division, ...
 41-127 1.44e-17

Cell division inhibitor SulA, prevents FtsZ ring assembly [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444163  Cd Length: 152  Bit Score: 73.86  E-value: 1.44e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515674114  41 LSNQHQWLLFTAQTPRPSAKQLKQHNVCCERVIHMKASNQMNEVETVEKAIRSGNASAIVASTS-IDSFSQQYLRTLGQR 119
Cdd:COG5404   56 LSQQSRWLLWLAPPQKLSRSWLQSAGLPLSKVLQLHPKSPENTLEAMEKALRSGNSSAVVAWLPeLSEEDRQRLQQAAQR 135


                 ....*...
gi 515674114 120 FQCEVFFI 127
Cdd:COG5404  136 GNALGFIM 143
SulA pfam03846
Cell division inhibitor SulA;
41-101 3.05e-05

Cell division inhibitor SulA;


Pssm-ID: 397775  Cd Length: 111  Bit Score: 40.51  E-value: 3.05e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 515674114   41 LSNQHQWLLFTAQTPRPSAKQLKQHNVCCERVIHMKASNQMNEVETVEKAIRSGNASAIVA 101
Cdd:pfam03846  48 LGQQSRWLLWLTPQQKLSRHWLQQAGLPLEKVMQLSQINPSSTVDAMEKALRTGNYSVVLG 108
PRK10595 PRK10595
cell division inhibitor SulA;
41-101 8.86e-03

cell division inhibitor SulA;


Pssm-ID: 182577  Cd Length: 164  Bit Score: 34.59  E-value: 8.86e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 515674114  41 LSNQHQWLLFTAQTPRPSAKQLKQHNVCCERVIHMKASNQMNEVETVEKAIRSGNASAIVA 101
Cdd:PRK10595  52 LGQQSRWQLWLTPQQKLSREWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLG 112
 
Name Accession Description Interval E-value
SulA COG5404
Cell division inhibitor SulA, prevents FtsZ ring assembly [Cell cycle control, cell division, ...
 41-127 1.44e-17

Cell division inhibitor SulA, prevents FtsZ ring assembly [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444163  Cd Length: 152  Bit Score: 73.86  E-value: 1.44e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515674114  41 LSNQHQWLLFTAQTPRPSAKQLKQHNVCCERVIHMKASNQMNEVETVEKAIRSGNASAIVASTS-IDSFSQQYLRTLGQR 119
Cdd:COG5404   56 LSQQSRWLLWLAPPQKLSRSWLQSAGLPLSKVLQLHPKSPENTLEAMEKALRSGNSSAVVAWLPeLSEEDRQRLQQAAQR 135


                 ....*...
gi 515674114 120 FQCEVFFI 127
Cdd:COG5404  136 GNALGFIM 143
SulA pfam03846
Cell division inhibitor SulA;
41-101 3.05e-05

Cell division inhibitor SulA;


Pssm-ID: 397775  Cd Length: 111  Bit Score: 40.51  E-value: 3.05e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 515674114   41 LSNQHQWLLFTAQTPRPSAKQLKQHNVCCERVIHMKASNQMNEVETVEKAIRSGNASAIVA 101
Cdd:pfam03846  48 LGQQSRWLLWLTPQQKLSRHWLQQAGLPLEKVMQLSQINPSSTVDAMEKALRTGNYSVVLG 108
PRK10595 PRK10595
cell division inhibitor SulA;
41-101 8.86e-03

cell division inhibitor SulA;


Pssm-ID: 182577  Cd Length: 164  Bit Score: 34.59  E-value: 8.86e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 515674114  41 LSNQHQWLLFTAQTPRPSAKQLKQHNVCCERVIHMKASNQMNEVETVEKAIRSGNASAIVA 101
Cdd:PRK10595  52 LGQQSRWQLWLTPQQKLSREWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLG 112
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH