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Conserved domains on  [gi|515814547|ref|WP_017245300|]
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MULTISPECIES: acetyl-CoA carboxylase, carboxyltransferase subunit beta [Stutzerimonas]

Protein Classification

acetyl-CoA carboxylase carboxyltransferase subunit beta( domain architecture ID 10002494)

acetyl-CoA carboxylase carboxyltransferase subunit beta (AccD) is a component of the acetyl coenzyme A carboxylase (ACC) complex that catalyzes the carboxylation of acetyl-CoA to form malonyl-CoA

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
AccD COG0777
Acetyl-CoA carboxylase beta subunit [Lipid transport and metabolism]; Acetyl-CoA carboxylase ...
3-283 0e+00

Acetyl-CoA carboxylase beta subunit [Lipid transport and metabolism]; Acetyl-CoA carboxylase beta subunit is part of the Pathway/BioSystem: Fatty acid biosynthesis


:

Pssm-ID: 440540 [Multi-domain]  Cd Length: 280  Bit Score: 550.82  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547   3 NWLvDKLIPSImRSETQKSSVPEGLWHKCPSCEAVLYRPELEKTLDVCPKCQHHMRIDARTRLDIFLDADGREEIAAELE 82
Cdd:COG0777    2 SWF-KKLKPKI-KTTSKKREVPEGLWTKCPSCGEILYRKELEENLYVCPKCGHHFRISARERLELLLDEGSFEELDADLV 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547  83 PVDRLKFRDSKKYKDRLSAAQKQTGEKDALIAMSGKVLNVPVVACAFEFSFMGGSMGAIVGERFVRAANVALEKRCPLVC 162
Cdd:COG0777   80 PVDPLKFKDSKKYKDRLKEAQKKTGLKDAVVTGTGTINGIPVVVAVMDFSFMGGSMGSVVGEKITRAIERAIEKKLPLII 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547 163 FSASGGARMQEALISLMQMAKTSAVLARMREEGLPFISVLTDPVYGGVSASLAMLGDVIVAEPKALIGFAGPRVIEQTVR 242
Cdd:COG0777  160 FSASGGARMQEGILSLMQMAKTSAALARLSEAGLPYISVLTDPTTGGVTASFAMLGDIIIAEPGALIGFAGPRVIEQTIR 239
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 515814547 243 EKLPEGFQRSEFLLEHGAIDLIIPRAELRSRLARLLAQMQK 283
Cdd:COG0777  240 EKLPEGFQRAEFLLEHGFIDMIVHRKELRDTLARLLALLTK 280
 
Name Accession Description Interval E-value
AccD COG0777
Acetyl-CoA carboxylase beta subunit [Lipid transport and metabolism]; Acetyl-CoA carboxylase ...
3-283 0e+00

Acetyl-CoA carboxylase beta subunit [Lipid transport and metabolism]; Acetyl-CoA carboxylase beta subunit is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440540 [Multi-domain]  Cd Length: 280  Bit Score: 550.82  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547   3 NWLvDKLIPSImRSETQKSSVPEGLWHKCPSCEAVLYRPELEKTLDVCPKCQHHMRIDARTRLDIFLDADGREEIAAELE 82
Cdd:COG0777    2 SWF-KKLKPKI-KTTSKKREVPEGLWTKCPSCGEILYRKELEENLYVCPKCGHHFRISARERLELLLDEGSFEELDADLV 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547  83 PVDRLKFRDSKKYKDRLSAAQKQTGEKDALIAMSGKVLNVPVVACAFEFSFMGGSMGAIVGERFVRAANVALEKRCPLVC 162
Cdd:COG0777   80 PVDPLKFKDSKKYKDRLKEAQKKTGLKDAVVTGTGTINGIPVVVAVMDFSFMGGSMGSVVGEKITRAIERAIEKKLPLII 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547 163 FSASGGARMQEALISLMQMAKTSAVLARMREEGLPFISVLTDPVYGGVSASLAMLGDVIVAEPKALIGFAGPRVIEQTVR 242
Cdd:COG0777  160 FSASGGARMQEGILSLMQMAKTSAALARLSEAGLPYISVLTDPTTGGVTASFAMLGDIIIAEPGALIGFAGPRVIEQTIR 239
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 515814547 243 EKLPEGFQRSEFLLEHGAIDLIIPRAELRSRLARLLAQMQK 283
Cdd:COG0777  240 EKLPEGFQRAEFLLEHGFIDMIVHRKELRDTLARLLALLTK 280
accD TIGR00515
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; The enzyme acetyl-CoA carboxylase ...
16-287 3.00e-159

acetyl-CoA carboxylase, carboxyl transferase, beta subunit; The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta. [Fatty acid and phospholipid metabolism, Biosynthesis]


Pssm-ID: 129606 [Multi-domain]  Cd Length: 285  Bit Score: 445.01  E-value: 3.00e-159
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547   16 SETQKSSVPEGLWHKCPSCEAVLYRPELEKTLDVCPKCQHHMRIDARTRLDIFLDADGREEIAAELEPVDRLKFRDSKKY 95
Cdd:TIGR00515  14 TSTRKAEVPEGVWTKCPKCGQVLYTKELERNLEVCPKCDHHMRMDARERIESLLDEGSFEEFNSHLEPKDPLKFKDSKKY 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547   96 KDRLSAAQKQTGEKDALIAMSGKVLNVPVVACAFEFSFMGGSMGAIVGERFVRAANVALEKRCPLVCFSASGGARMQEAL 175
Cdd:TIGR00515  94 KDRIAKAQKETGEKDAVVTGKGTLYGMPIVVAVFDFAFMGGSMGSVVGEKFVRAIEKALEDNCPLIIFSASGGARMQEAL 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547  176 ISLMQMAKTSAVLARMREEGLPFISVLTDPVYGGVSASLAMLGDVIVAEPKALIGFAGPRVIEQTVREKLPEGFQRSEFL 255
Cdd:TIGR00515 174 LSLMQMAKTSAALAKMSERGLPYISVLTDPTTGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVREKLPEGFQTSEFL 253
                         250       260       270
                  ....*....|....*....|....*....|..
gi 515814547  256 LEHGAIDLIIPRAELRSRLARLLAQMQKLPTP 287
Cdd:TIGR00515 254 LEHGAIDMIVHRPEMKKTLASLLAKLQNLPSP 285
accD CHL00174
acetyl-CoA carboxylase beta subunit; Reviewed
5-278 4.06e-96

acetyl-CoA carboxylase beta subunit; Reviewed


Pssm-ID: 214384 [Multi-domain]  Cd Length: 296  Bit Score: 285.26  E-value: 4.06e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547   5 LVDKLIPSIMRSETQKS---SVPEGLWHKCPSCEAVLYRPELEKTLDVCPKCQHHMRIDARTRLDIFLDADGREEIAAEL 81
Cdd:CHL00174  12 QIFEIDNDSYMYDTKYSwntQKYKHLWVQCENCYGLNYKKFLKSKMNICEQCGYHLKMSSSDRIELLIDPGTWNPMDEDM 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547  82 EPVDRLKF-RDSKKYKDRLSAAQKQTGEKDALIAMSGKVLNVPVVACAFEFSFMGGSMGAIVGERFVRAANVALEKRCPL 160
Cdd:CHL00174  92 VSLDPIEFhSDEEPYKDRIDSYQKKTGLTDAVQTGIGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNESLPL 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547 161 VCFSASGGARMQEALISLMQMAKTSAVLARMR-EEGLPFISVLTDPVYGGVSASLAMLGDVIVAEPKALIGFAGPRVIEQ 239
Cdd:CHL00174 172 IIVCASGGARMQEGSLSLMQMAKISSALYDYQsNKKLFYISILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQ 251
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 515814547 240 TVREKLPEGFQRSEFLLEHGAIDLIIPRAELRSRLARLL 278
Cdd:CHL00174 252 TLNKTVPEGSQAAEYLFDKGLFDLIVPRNLLKGVLSELF 290
Carboxyl_trans pfam01039
Carboxyl transferase domain; All of the members in this family are biotin dependent ...
61-238 4.59e-17

Carboxyl transferase domain; All of the members in this family are biotin dependent carboxylases. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognized types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxoacid as the acceptor molecule of carbon dioxide. All of the members in this family utilize acyl-CoA as the acceptor molecule.


Pssm-ID: 426008 [Multi-domain]  Cd Length: 491  Bit Score: 81.15  E-value: 4.59e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547   61 ARTRLDIFLDADGREEIAAELEPvdrlkfrdskkykdRLSAAQKQTGEKDALIAMSGKVLNVPVVACAFEFSFMGGSMGA 140
Cdd:pfam01039  10 ARERIDLLLDPGSFGELEDLFFH--------------RATEFGRKRIPRDGVVTGSGAVIGRAVEVVAQDFTVFGGSLGP 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547  141 IVGERFVRAANVALEKRCPLVCFSASGGARMQEALISLMQMAKTSAVLARMrEEGLPFISVLTDPVYGGvSASLAMLGDV 220
Cdd:pfam01039  76 AKGEKILRAMEIAIKTGLPLIGINDSGGARIQEGVENLRGSGKIFGRNSLA-SGVIPQISLIMGPCAGG-GAYLPALGDF 153
                         170
                  ....*....|....*....
gi 515814547  221 IVA-EPKALIGFAGPRVIE 238
Cdd:pfam01039 154 VIMvEGTSPMFLTGPPVIK 172
 
Name Accession Description Interval E-value
AccD COG0777
Acetyl-CoA carboxylase beta subunit [Lipid transport and metabolism]; Acetyl-CoA carboxylase ...
3-283 0e+00

Acetyl-CoA carboxylase beta subunit [Lipid transport and metabolism]; Acetyl-CoA carboxylase beta subunit is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440540 [Multi-domain]  Cd Length: 280  Bit Score: 550.82  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547   3 NWLvDKLIPSImRSETQKSSVPEGLWHKCPSCEAVLYRPELEKTLDVCPKCQHHMRIDARTRLDIFLDADGREEIAAELE 82
Cdd:COG0777    2 SWF-KKLKPKI-KTTSKKREVPEGLWTKCPSCGEILYRKELEENLYVCPKCGHHFRISARERLELLLDEGSFEELDADLV 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547  83 PVDRLKFRDSKKYKDRLSAAQKQTGEKDALIAMSGKVLNVPVVACAFEFSFMGGSMGAIVGERFVRAANVALEKRCPLVC 162
Cdd:COG0777   80 PVDPLKFKDSKKYKDRLKEAQKKTGLKDAVVTGTGTINGIPVVVAVMDFSFMGGSMGSVVGEKITRAIERAIEKKLPLII 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547 163 FSASGGARMQEALISLMQMAKTSAVLARMREEGLPFISVLTDPVYGGVSASLAMLGDVIVAEPKALIGFAGPRVIEQTVR 242
Cdd:COG0777  160 FSASGGARMQEGILSLMQMAKTSAALARLSEAGLPYISVLTDPTTGGVTASFAMLGDIIIAEPGALIGFAGPRVIEQTIR 239
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 515814547 243 EKLPEGFQRSEFLLEHGAIDLIIPRAELRSRLARLLAQMQK 283
Cdd:COG0777  240 EKLPEGFQRAEFLLEHGFIDMIVHRKELRDTLARLLALLTK 280
accD TIGR00515
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; The enzyme acetyl-CoA carboxylase ...
16-287 3.00e-159

acetyl-CoA carboxylase, carboxyl transferase, beta subunit; The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta. [Fatty acid and phospholipid metabolism, Biosynthesis]


Pssm-ID: 129606 [Multi-domain]  Cd Length: 285  Bit Score: 445.01  E-value: 3.00e-159
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547   16 SETQKSSVPEGLWHKCPSCEAVLYRPELEKTLDVCPKCQHHMRIDARTRLDIFLDADGREEIAAELEPVDRLKFRDSKKY 95
Cdd:TIGR00515  14 TSTRKAEVPEGVWTKCPKCGQVLYTKELERNLEVCPKCDHHMRMDARERIESLLDEGSFEEFNSHLEPKDPLKFKDSKKY 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547   96 KDRLSAAQKQTGEKDALIAMSGKVLNVPVVACAFEFSFMGGSMGAIVGERFVRAANVALEKRCPLVCFSASGGARMQEAL 175
Cdd:TIGR00515  94 KDRIAKAQKETGEKDAVVTGKGTLYGMPIVVAVFDFAFMGGSMGSVVGEKFVRAIEKALEDNCPLIIFSASGGARMQEAL 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547  176 ISLMQMAKTSAVLARMREEGLPFISVLTDPVYGGVSASLAMLGDVIVAEPKALIGFAGPRVIEQTVREKLPEGFQRSEFL 255
Cdd:TIGR00515 174 LSLMQMAKTSAALAKMSERGLPYISVLTDPTTGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVREKLPEGFQTSEFL 253
                         250       260       270
                  ....*....|....*....|....*....|..
gi 515814547  256 LEHGAIDLIIPRAELRSRLARLLAQMQKLPTP 287
Cdd:TIGR00515 254 LEHGAIDMIVHRPEMKKTLASLLAKLQNLPSP 285
accD CHL00174
acetyl-CoA carboxylase beta subunit; Reviewed
5-278 4.06e-96

acetyl-CoA carboxylase beta subunit; Reviewed


Pssm-ID: 214384 [Multi-domain]  Cd Length: 296  Bit Score: 285.26  E-value: 4.06e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547   5 LVDKLIPSIMRSETQKS---SVPEGLWHKCPSCEAVLYRPELEKTLDVCPKCQHHMRIDARTRLDIFLDADGREEIAAEL 81
Cdd:CHL00174  12 QIFEIDNDSYMYDTKYSwntQKYKHLWVQCENCYGLNYKKFLKSKMNICEQCGYHLKMSSSDRIELLIDPGTWNPMDEDM 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547  82 EPVDRLKF-RDSKKYKDRLSAAQKQTGEKDALIAMSGKVLNVPVVACAFEFSFMGGSMGAIVGERFVRAANVALEKRCPL 160
Cdd:CHL00174  92 VSLDPIEFhSDEEPYKDRIDSYQKKTGLTDAVQTGIGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNESLPL 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547 161 VCFSASGGARMQEALISLMQMAKTSAVLARMR-EEGLPFISVLTDPVYGGVSASLAMLGDVIVAEPKALIGFAGPRVIEQ 239
Cdd:CHL00174 172 IIVCASGGARMQEGSLSLMQMAKISSALYDYQsNKKLFYISILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQ 251
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 515814547 240 TVREKLPEGFQRSEFLLEHGAIDLIIPRAELRSRLARLL 278
Cdd:CHL00174 252 TLNKTVPEGSQAAEYLFDKGLFDLIVPRNLLKGVLSELF 290
Carboxyl_trans pfam01039
Carboxyl transferase domain; All of the members in this family are biotin dependent ...
61-238 4.59e-17

Carboxyl transferase domain; All of the members in this family are biotin dependent carboxylases. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognized types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxoacid as the acceptor molecule of carbon dioxide. All of the members in this family utilize acyl-CoA as the acceptor molecule.


Pssm-ID: 426008 [Multi-domain]  Cd Length: 491  Bit Score: 81.15  E-value: 4.59e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547   61 ARTRLDIFLDADGREEIAAELEPvdrlkfrdskkykdRLSAAQKQTGEKDALIAMSGKVLNVPVVACAFEFSFMGGSMGA 140
Cdd:pfam01039  10 ARERIDLLLDPGSFGELEDLFFH--------------RATEFGRKRIPRDGVVTGSGAVIGRAVEVVAQDFTVFGGSLGP 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547  141 IVGERFVRAANVALEKRCPLVCFSASGGARMQEALISLMQMAKTSAVLARMrEEGLPFISVLTDPVYGGvSASLAMLGDV 220
Cdd:pfam01039  76 AKGEKILRAMEIAIKTGLPLIGINDSGGARIQEGVENLRGSGKIFGRNSLA-SGVIPQISLIMGPCAGG-GAYLPALGDF 153
                         170
                  ....*....|....*....
gi 515814547  221 IVA-EPKALIGFAGPRVIE 238
Cdd:pfam01039 154 VIMvEGTSPMFLTGPPVIK 172
MmdA COG4799
Acetyl-CoA carboxylase, carboxyltransferase component [Lipid transport and metabolism];
61-238 3.45e-15

Acetyl-CoA carboxylase, carboxyltransferase component [Lipid transport and metabolism];


Pssm-ID: 443827 [Multi-domain]  Cd Length: 508  Bit Score: 75.45  E-value: 3.45e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547  61 ARTRLDIFLDADGREEIaaelepvdrlkfrdskkykDRLsAAQKQTGEK-----DALIAMSGKVLNVPVVACAFEFSFMG 135
Cdd:COG4799   36 ARERIDLLLDPGSFLEL-------------------GAL-AGHRMYDDDdrvpgDGVVTGIGTVDGRPVVVVANDFTVKG 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547 136 GSMGAIVGERFVRAANVALEKRCPLVCFSASGGARMQEALISLMQMAKTSAVLARMReEGLPFISVLTDPVYGGVSASLA 215
Cdd:COG4799   96 GSLGPMTAKKILRAQDIALENGLPVIYLVDSGGARLQEGVESFAGYGRIFYRNARSS-GGIPQISVIMGPCAAGGAYSPA 174
                        170       180
                 ....*....|....*....|....
gi 515814547 216 MlGDVIVA-EPKALIGFAGPRVIE 238
Cdd:COG4799  175 L-SDFVIMvKGTSQMFLGGPPVVK 197
zf-ACC pfam17848
Acetyl-coA carboxylase zinc finger domain; Acetyl-coA carboxylase (ACC) is a central metabolic ...
28-53 1.76e-10

Acetyl-coA carboxylase zinc finger domain; Acetyl-coA carboxylase (ACC) is a central metabolic enzyme that catalyzes the committed step in fatty acid biosynthesis: biotin- dependent conversion of acetyl-coA to malonyl-coA. In bacteria this protein contains a small zinc finger domain.


Pssm-ID: 436090 [Multi-domain]  Cd Length: 26  Bit Score: 54.92  E-value: 1.76e-10
                          10        20
                  ....*....|....*....|....*.
gi 515814547   28 WHKCPSCEAVLYRPELEKTLDVCPKC 53
Cdd:pfam17848   1 WIKCPSCGEILYRKDLERNLSVCPKC 26
PRK07189 PRK07189
malonate decarboxylase subunit beta; Reviewed
60-297 1.36e-08

malonate decarboxylase subunit beta; Reviewed


Pssm-ID: 235954  Cd Length: 301  Bit Score: 54.91  E-value: 1.36e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547  60 DARTRLDIFLDADGREEIaaeLEPVDRLkfrdskkykdrLS---AAQKQTGE-KDALIAMSGKVLNVPVVACAFEFSFMG 135
Cdd:PRK07189  16 SARERAAALLDAGSFREL---LGPFERV-----------MSphlPLQGIPPQfDDGVVVGKGTLDGRPVVVAAQEGRFMG 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547 136 GSMGAIVGERFVRAANVALE------KRCPLVCFSaSGGARMQEALISLMQMAKTSAVLARMREEGlPFISVLTDPV--Y 207
Cdd:PRK07189  82 GSVGEVHGAKLAGALELAAEdnrngiPTAVLLLFE-TGGVRLQEANAGLAAIAEIMRAIVDLRAAV-PVIGLIGGRVgcF 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515814547 208 GGVSAsLAMLGDVIVAEPKALIGFAGPRVIEQT--VRE----------KLPEGFQR-----SEFLLE-------HGAIDL 263
Cdd:PRK07189 160 GGMGI-AAALCSYLIVSEEGRLGLSGPEVIEQEagVEEfdsrdralvwRTTGGKHRylsglADALVDddvaafrAAALAL 238
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 515814547 264 I----IPRAELRSRLARLLAQMQKLPTPVETSQVTAKA 297
Cdd:PRK07189 239 LargpFPAAHRSAEQARLLARLARFDTCRDALDVWRAL 276
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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