MULTISPECIES: IS66 family insertion sequence element accessory protein TnpB [Burkholderia]
transposase( domain architecture ID 10529723)
transposase binds to the end of a transposon and catalyzes the movement of the transposon to another part of the genome by a cut and paste mechanism or a replicative transposition mechanism
List of domain hits
Name | Accession | Description | Interval | E-value | |||
TnpB_IS66 | pfam05717 | IS66 Orf2 like protein; This protein is found in insertion sequences related to IS66. The ... |
13-107 | 4.75e-54 | |||
IS66 Orf2 like protein; This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition. : Pssm-ID: 461723 Cd Length: 96 Bit Score: 163.80 E-value: 4.75e-54
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Name | Accession | Description | Interval | E-value | |||
TnpB_IS66 | pfam05717 | IS66 Orf2 like protein; This protein is found in insertion sequences related to IS66. The ... |
13-107 | 4.75e-54 | |||
IS66 Orf2 like protein; This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition. Pssm-ID: 461723 Cd Length: 96 Bit Score: 163.80 E-value: 4.75e-54
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IS66_TnpB | NF033819 | IS66 family insertion sequence element accessory protein TnpB; The IS66 family insertion ... |
10-99 | 7.37e-51 | |||
IS66 family insertion sequence element accessory protein TnpB; The IS66 family insertion sequence element encodes a DDE transposase TnpC, and two accessory proteins, TnpA and TnpB. It has been assumed that the TnpA, TnpB, and TnpC proteins are produced independently in appropriate amounts and form a complex, which acts as a transposase to promote the transposition of an IS66 family element. Pssm-ID: 411392 Cd Length: 90 Bit Score: 155.72 E-value: 7.37e-51
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COG3436 | COG3436 | Transposase [Mobilome: prophages, transposons]; |
15-103 | 3.24e-07 | |||
Transposase [Mobilome: prophages, transposons]; Pssm-ID: 442662 [Multi-domain] Cd Length: 416 Bit Score: 46.95 E-value: 3.24e-07
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Name | Accession | Description | Interval | E-value | |||
TnpB_IS66 | pfam05717 | IS66 Orf2 like protein; This protein is found in insertion sequences related to IS66. The ... |
13-107 | 4.75e-54 | |||
IS66 Orf2 like protein; This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition. Pssm-ID: 461723 Cd Length: 96 Bit Score: 163.80 E-value: 4.75e-54
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IS66_TnpB | NF033819 | IS66 family insertion sequence element accessory protein TnpB; The IS66 family insertion ... |
10-99 | 7.37e-51 | |||
IS66 family insertion sequence element accessory protein TnpB; The IS66 family insertion sequence element encodes a DDE transposase TnpC, and two accessory proteins, TnpA and TnpB. It has been assumed that the TnpA, TnpB, and TnpC proteins are produced independently in appropriate amounts and form a complex, which acts as a transposase to promote the transposition of an IS66 family element. Pssm-ID: 411392 Cd Length: 90 Bit Score: 155.72 E-value: 7.37e-51
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COG3436 | COG3436 | Transposase [Mobilome: prophages, transposons]; |
15-103 | 3.24e-07 | |||
Transposase [Mobilome: prophages, transposons]; Pssm-ID: 442662 [Multi-domain] Cd Length: 416 Bit Score: 46.95 E-value: 3.24e-07
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Blast search parameters | ||||
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