NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|515915849|ref|WP_017346432|]
View 

MULTISPECIES: flagellar basal body-associated protein FliL [Pantoea]

Protein Classification

flagellar basal body-associated protein FliL( domain architecture ID 10012864)

flagellar basal body-associated protein FliL interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
fliL PRK07021
flagellar basal body-associated protein FliL; Reviewed
 1-161 4.40e-71

flagellar basal body-associated protein FliL; Reviewed


:

Pssm-ID: 235909 [Multi-domain]  Cd Length: 162  Bit Score: 211.30  E-value: 4.40e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515915849   1 MSDNAKAKGRKRSILVPVLLFVTLAACSVAGYAVWRMmnKPEGEKSAAAKVEPPAAPVFFALDTFTVNLVnPDNDPDRVL 80
Cdd:PRK07021   5 SAIPPAKSGKKRKLWLIILILLLLAAAAGAGYSWWLS--KEQATAAAKAAPAPPPAPVFFPLETFTVNLQ-PDDDADRVL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515915849  81 YVGFTLRLPDEDTRRRLNDYLPEVRSRLLLLLSRQSAGALATEQGKQALVEQIKQVLAPPLVTGQPPQAVNDVLFTAFIL 160
Cdd:PRK07021  82 YVGLTLRLPDEATRERLKDYLPEVRSRLLLLLSRKHAAELATEEGKQKLAAEIKQTLSQPLVPGQPPQVVTDVLFTAFIL 161


                 .
gi 515915849 161 R 161
Cdd:PRK07021 162 Q 162
 
Name Accession Description Interval E-value
fliL PRK07021
flagellar basal body-associated protein FliL; Reviewed
 1-161 4.40e-71

flagellar basal body-associated protein FliL; Reviewed


Pssm-ID: 235909 [Multi-domain]  Cd Length: 162  Bit Score: 211.30  E-value: 4.40e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515915849   1 MSDNAKAKGRKRSILVPVLLFVTLAACSVAGYAVWRMmnKPEGEKSAAAKVEPPAAPVFFALDTFTVNLVnPDNDPDRVL 80
Cdd:PRK07021   5 SAIPPAKSGKKRKLWLIILILLLLAAAAGAGYSWWLS--KEQATAAAKAAPAPPPAPVFFPLETFTVNLQ-PDDDADRVL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515915849  81 YVGFTLRLPDEDTRRRLNDYLPEVRSRLLLLLSRQSAGALATEQGKQALVEQIKQVLAPPLVTGQPPQAVNDVLFTAFIL 160
Cdd:PRK07021  82 YVGLTLRLPDEATRERLKDYLPEVRSRLLLLLSRKHAAELATEEGKQKLAAEIKQTLSQPLVPGQPPQVVTDVLFTAFIL 161


                 .
gi 515915849 161 R 161
Cdd:PRK07021 162 Q 162
FliL COG1580
Flagellar basal body-associated protein FliL [Cell motility];
1-161 6.18e-30

Flagellar basal body-associated protein FliL [Cell motility];


Pssm-ID: 441188 [Multi-domain]  Cd Length: 153  Bit Score: 106.58  E-value: 6.18e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515915849   1 MSDnAKAKGRKRSILVPVLLFVTLAACSVAGYavWRMMNKPEGEKSAAAKVEPPAAPVFFALDTFTVNLvnPDNDPDRVL 80
Cdd:COG1580    1 MAE-AKKGGKKKLILIILALVVLLLAAGGGAY--FLLGSGAAAEAAEAAAAEPKPPPVYVPLDPFTVNL--ADGGRDRYL 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515915849  81 YVGFTLRLPDEDTRRRLNDYLPEVRSRLLLLLSRQSAGALATEQGKQALVEQIKQVLAPPLvtgQPPQAVNDVLFTAFIL 160
Cdd:COG1580   76 KVGITLEVADEKAAEELEKHMPEIRDALLMLLSSKTAEDLSTPEGKEKLREELLERINEVL---GKEGKVEDVLFTEFVV 152


                 .
gi 515915849 161 R 161
Cdd:COG1580  153 Q 153
FliL pfam03748
Flagellar basal body-associated protein FliL; This FliL protein controls the rotational ...
 63-160 4.16e-12

Flagellar basal body-associated protein FliL; This FliL protein controls the rotational direction of the flagella during chemotaxis. FliL is a cytoplasmic membrane protein associated with the basal body.


Pssm-ID: 461038  Cd Length: 98  Bit Score: 58.83  E-value: 4.16e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515915849   63 DTFTVNLvnPDNDPDRVLYVGFTLRLPDEDTrrrLNDYLPEVRSRLLLLLSRQSAGALATEQGKQALVEQIKQVLAPPLV 142
Cdd:pfam03748   5 PPFTVNL--ADGDGDRYLKVSIALEVDDEEA---LEKRMPRIRDAIISLLSSKTAEDLSTPEGKEKLKEELLERINKVLG 79

                          90
                  ....*....|....*...
gi 515915849  143 TGQPPQAVNDVLFTAFIL 160
Cdd:pfam03748  80 EKLGKGPVEDVLFTEFVV 97
 
Name Accession Description Interval E-value
fliL PRK07021
flagellar basal body-associated protein FliL; Reviewed
 1-161 4.40e-71

flagellar basal body-associated protein FliL; Reviewed


Pssm-ID: 235909 [Multi-domain]  Cd Length: 162  Bit Score: 211.30  E-value: 4.40e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515915849   1 MSDNAKAKGRKRSILVPVLLFVTLAACSVAGYAVWRMmnKPEGEKSAAAKVEPPAAPVFFALDTFTVNLVnPDNDPDRVL 80
Cdd:PRK07021   5 SAIPPAKSGKKRKLWLIILILLLLAAAAGAGYSWWLS--KEQATAAAKAAPAPPPAPVFFPLETFTVNLQ-PDDDADRVL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515915849  81 YVGFTLRLPDEDTRRRLNDYLPEVRSRLLLLLSRQSAGALATEQGKQALVEQIKQVLAPPLVTGQPPQAVNDVLFTAFIL 160
Cdd:PRK07021  82 YVGLTLRLPDEATRERLKDYLPEVRSRLLLLLSRKHAAELATEEGKQKLAAEIKQTLSQPLVPGQPPQVVTDVLFTAFIL 161


                 .
gi 515915849 161 R 161
Cdd:PRK07021 162 Q 162
FliL COG1580
Flagellar basal body-associated protein FliL [Cell motility];
1-161 6.18e-30

Flagellar basal body-associated protein FliL [Cell motility];


Pssm-ID: 441188 [Multi-domain]  Cd Length: 153  Bit Score: 106.58  E-value: 6.18e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515915849   1 MSDnAKAKGRKRSILVPVLLFVTLAACSVAGYavWRMMNKPEGEKSAAAKVEPPAAPVFFALDTFTVNLvnPDNDPDRVL 80
Cdd:COG1580    1 MAE-AKKGGKKKLILIILALVVLLLAAGGGAY--FLLGSGAAAEAAEAAAAEPKPPPVYVPLDPFTVNL--ADGGRDRYL 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515915849  81 YVGFTLRLPDEDTRRRLNDYLPEVRSRLLLLLSRQSAGALATEQGKQALVEQIKQVLAPPLvtgQPPQAVNDVLFTAFIL 160
Cdd:COG1580   76 KVGITLEVADEKAAEELEKHMPEIRDALLMLLSSKTAEDLSTPEGKEKLREELLERINEVL---GKEGKVEDVLFTEFVV 152


                 .
gi 515915849 161 R 161
Cdd:COG1580  153 Q 153
FliL pfam03748
Flagellar basal body-associated protein FliL; This FliL protein controls the rotational ...
 63-160 4.16e-12

Flagellar basal body-associated protein FliL; This FliL protein controls the rotational direction of the flagella during chemotaxis. FliL is a cytoplasmic membrane protein associated with the basal body.


Pssm-ID: 461038  Cd Length: 98  Bit Score: 58.83  E-value: 4.16e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515915849   63 DTFTVNLvnPDNDPDRVLYVGFTLRLPDEDTrrrLNDYLPEVRSRLLLLLSRQSAGALATEQGKQALVEQIKQVLAPPLV 142
Cdd:pfam03748   5 PPFTVNL--ADGDGDRYLKVSIALEVDDEEA---LEKRMPRIRDAIISLLSSKTAEDLSTPEGKEKLKEELLERINKVLG 79

                          90
                  ....*....|....*...
gi 515915849  143 TGQPPQAVNDVLFTAFIL 160
Cdd:pfam03748  80 EKLGKGPVEDVLFTEFVV 97
fliL PRK08455
flagellar basal body-associated protein FliL; Reviewed
 1-159 2.31e-04

flagellar basal body-associated protein FliL; Reviewed


Pssm-ID: 181433 [Multi-domain]  Cd Length: 182  Bit Score: 39.67  E-value: 2.31e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515915849   1 MSDNAKAKGRKRSILVPVLLFVTLAACSVAGYAVWRMMNKPEGEKSAAAKVE------PPAAP----------------- 57
Cdd:PRK08455   5 QENEAQQKKKKSKALLIIIIGVVVLLLLIVGVIAMLLMGSKEEEKENAQKPTqevqanPPANSaqeakegsniqdflnig 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515915849  58 VFFALDTFTVNLVNpDNDpDRVLYVGFTLRLPDEDTRRRLNDYLPEVRSRLLLLLSRQSAGALATEQGKQALVEQIKQVL 137
Cdd:PRK08455  85 PLYPLDPFTVNLLS-QSG-RRYLKTSISLELSNEKLKPELDKKDPVIRDIIIRILSSKTVEEVSTNKGKERLKDEIVGKL 162

                        170       180
                 ....*....|....*....|..
gi 515915849 138 APPLVTGQppqaVNDVLFTAFI 159
Cdd:PRK08455 163 NEFLIDGF----IKNVFFTDFV 180
fliL PRK05696
flagellar basal body-associated protein FliL; Reviewed
 8-160 4.58e-03

flagellar basal body-associated protein FliL; Reviewed


Pssm-ID: 180207  Cd Length: 170  Bit Score: 35.70  E-value: 4.58e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515915849   8 KGRKRSILVPVLLFVTLAAcsvAGYAVWRMMNKPEGEKSAAAKVE-----PPAAPVFFA--LDTFTVNLvnPDNDPDRVL 80
Cdd:PRK05696  15 KSKKKLIIIIVIGVLLALG---GGGAAWFFMGSSDKAAAAAAEAAaeaaaAVKGPALYVpmPRPFVFNV--PGNGRDRLV 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 515915849  81 YVGFTLRLPDEDTRRRLNDYLPEVRSRLLLLLSRQSAGALATEQGKQALVEQ----IKQVLAPplVTGQPpqAVNDVLFT 156
Cdd:PRK05696  90 QIKVQLMVRGSDDEELAKKHIPLIESALLMTFSSATVDQLSTPAGKEELRQKalasVQETLQK--VTGKP--VVEKVLFT 165


                 ....
gi 515915849 157 AFIL 160
Cdd:PRK05696 166 GFVM 169
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH