|
Name |
Accession |
Description |
Interval |
E-value |
| Bthiol_YpdA |
TIGR04018 |
putative bacillithiol system oxidoreductase, YpdA family; Members of this protein family, ... |
5-321 |
0e+00 |
|
putative bacillithiol system oxidoreductase, YpdA family; Members of this protein family, including YpdA from Bacillus subtilis, are apparent oxidoreductases present only in species with an active bacillithiol system. They have been suggested actually to be thiol disulfide oxidoreductases (TDOR), although the evidence is incomplete. [Unknown function, Enzymes of unknown specificity]
Pssm-ID: 188533 [Multi-domain] Cd Length: 316 Bit Score: 525.98 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 5 KAIIIGGGPCGLSAAIHLKQIGIDALVIEKGNVVNSIYNYPTHQTFFSSSEKLEIGDVAFITENRKPVRIQALSYYREVV 84
Cdd:TIGR04018 1 DVIIIGAGPCGLACAIEAQKAGLSYLIIEKGNLVNSIYRYPTNMTFFSTSERLEIGGIPFISENPKPTRNEALEYYRRVA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 85 KRKNIRVNAFEMVHKVTKTENDtFVIETSKETYTTPYCIIATGYYDHPNYMNVPGENLPKVFHYFKEGHPYFDKDVVVIG 164
Cdd:TIGR04018 81 ERFKLNIRLYEEVLKVKKTDGG-FEVTTEKGTYQAKNVIVATGYYDIPNLLNVPGEDLPKVSHYYKEAHPYFGQKVVVVG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 165 GKNSSVDAALELVKSGARVTVLYRGNEYSPSIKPWILPEFEALVRNGTIRMEFGACVEKITEDEVVYRSGEKELITIKND 244
Cdd:TIGR04018 160 GSNSAVDAALELYRKGAEVTMVHRGDEVSSSVKYWVRPDIENRIKEGSIKAYFNSRVKEITEDSVTLETPDGEVHTIPND 239
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 516292591 245 FVFAMTGYHPDHQFLEKIGVEIDKETGRPYFNEETMETNVEGVFIAGVIAAGNNANEIFIENGRFHGGHIAAEIAKR 321
Cdd:TIGR04018 240 FVFALTGYRPDFEFLESLGVELDEDTGIPVYNPETMETNVPGLYLAGVIAAGMDTNKIFIENGRFHAPLIAEHIASK 316
|
|
| Pyr_redox_3 |
pfam13738 |
Pyridine nucleotide-disulphide oxidoreductase; |
13-291 |
1.08e-134 |
|
Pyridine nucleotide-disulphide oxidoreductase;
Pssm-ID: 404603 [Multi-domain] Cd Length: 296 Bit Score: 384.27 E-value: 1.08e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 13 PCGLSAAIHLKQIGIDA-LVIEKGNVVNSIYNYPTHQTFFSSS---EKLEIGDVAFITENRKPV---------RIQALSY 79
Cdd:pfam13738 1 PAGIGCAIALKKAGLEDyLILEKGNIGNSFYRYPTHMTFFSPSftsNGFGIPDLNAISPGTSPAftfnrehpsGNEYAEY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 80 YREVVKRKNIRVNAFEMVHKVTKtENDTFVIETSKETYTTPYCIIATGYYDHPNYMNVPgeNLPKVFHYFKEGHPYFDKD 159
Cdd:pfam13738 81 LRRVADHFELPINLFEEVTSVKK-EDDGFVVTTSKGTYQARYVIIATGEFDFPNKLGVP--ELPKHYSYVKDFHPYAGQK 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 160 VVVIGGKNSSVDAALELVKSGARVTVLYRGNE-------YSPSIKPWILPEFEALVRNGTIRMEFGACVEKITEDEVVYR 232
Cdd:pfam13738 158 VVVIGGYNSAVDAALELVRKGARVTVLYRGSEwedrdsdPSYSLSPDTLNRLEELVKNGKIKAHFNAEVKEITEVDVSYK 237
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 233 SGEKELITI-KNDFVFAMTGYHPDHQFLEKIGVEIDkETGRPYFNEETMETNVEGVFIAG 291
Cdd:pfam13738 238 VHTEDGRKVtSNDDPILATGYHPDLSFLKKGLFELD-EDGRPVLTEETESTNVPGLFLAG 296
|
|
| TrxB |
COG0492 |
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; |
5-291 |
2.21e-40 |
|
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440258 [Multi-domain] Cd Length: 305 Bit Score: 143.34 E-value: 2.21e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 5 KAIIIGGGPCGLSAAIHLKQIGIDALVIEKGNV------VNSIYNYPthqtffsssekleigdvAFITENRKPVRIQALs 78
Cdd:COG0492 2 DVVIIGAGPAGLTAAIYAARAGLKTLVIEGGEPggqlatTKEIENYP-----------------GFPEGISGPELAERL- 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 79 yyREVVKRKNIRVnAFEMVHKVTKtENDTFVIETSK-ETYTTPYCIIATGyyDHPNYMNVPGENLPKVF--HYF--KEGH 153
Cdd:COG0492 64 --REQAERFGAEI-LLEEVTSVDK-DDGPFRVTTDDgTEYEAKAVIIATG--AGPRKLGLPGEEEFEGRgvSYCatCDGF 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 154 PYFDKDVVVIGGKNSSVDAALELVKSGARVTVLYRGNEYSPSiKPWIlpefEALVRNGTIRMEFGACVEKITEDE----V 229
Cdd:COG0492 138 FFRGKDVVVVGGGDSALEEALYLTKFASKVTLIHRRDELRAS-KILV----ERLRANPKIEVLWNTEVTEIEGDGrvegV 212
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 516292591 230 VYRSGE-KELITIKNDFVFAMTGYHPDHQFLEKIGVEIDKE----TGrpyfneETMETNVEGVFIAG 291
Cdd:COG0492 213 TLKNVKtGEEKELEVDGVFVAIGLKPNTELLKGLGLELDEDgyivVD------EDMETSVPGVFAAG 273
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
6-264 |
5.52e-30 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 117.66 E-value: 5.52e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 6 AIIIGGGPCGLSAAIHLKQIGIDALVIEKG-----------------NVVNSIYNYP-----THQTFFSSSEklEIgdva 63
Cdd:COG2072 9 VVVIGAGQAGLAAAYHLRRAGIDFVVLEKAddvggtwrdnrypglrlDTPSHLYSLPffpnwSDDPDFPTGD--EI---- 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 64 fitenrkpvriqaLSYYREVVK----RKNIRVNafemvHKVTK----TENDTFVIETSK-ETYTTPYCIIATGYYDHPNY 134
Cdd:COG2072 83 -------------LAYLEAYADkfglRRPIRFG-----TEVTSarwdEADGRWTVTTDDgETLTARFVVVATGPLSRPKI 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 135 MNVPGENLPK--VFH--YFKEGHPYFDKDVVVIGGKNSSVDAALELVKSGARVTVLYRgneySPsikPWILPEFEALVRN 210
Cdd:COG2072 145 PDIPGLEDFAgeQLHsaDWRNPVDLAGKRVLVVGTGASAVQIAPELARVAAHVTVFQR----TP---PWVLPRPNYDPER 217
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 516292591 211 GTIRMEFGACVEKITEDEVVYRSGEKELITIKNDFVFAMtgYHPDHQFLEKIGV 264
Cdd:COG2072 218 GRPANYLGLEAPPALNRRDARAWLRRLLRAQVKDPELGL--LTPDYPPGCKRPL 269
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
7-291 |
1.05e-28 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 112.03 E-value: 1.05e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 7 IIIGGGPCGLSAAIHLKQIGIDALVIEKGNvvnsiyNYPTHQTFFSSseklEIGDVAFITENRKpVRIQALSYYREVVKR 86
Cdd:pfam07992 4 VVIGGGPAGLAAALTLAQLGGKVTLIEDEG------TCPYGGCVLSK----ALLGAAEAPEIAS-LWADLYKRKEEVVKK 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 87 KNIRVnafEMVHKVTKTEND----TFVIETSK----ETYTTPYCIIATGyyDHPNYMNVPGENLPKVFHYF----KEG-- 152
Cdd:pfam07992 73 LNNGI---EVLLGTEVVSIDpgakKVVLEELVdgdgETITYDRLVIATG--ARPRLPPIPGVELNVGFLVRtldsAEAlr 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 153 HPYFDKDVVVIGGKNSSVDAALELVKSGARVTVLYRGNE----YSPSIKPWILpefEALVRNGtIRMEFGACVEKITEDE 228
Cdd:pfam07992 148 LKLLPKRVVVVGGGYIGVELAAALAKLGKEVTLIEALDRllraFDEEISAALE---KALEKNG-VEVRLGTSVKEIIGDG 223
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 516292591 229 VVYRSGEKELITIKNDFVFAMTGYHPDHQFLEKIGVEIDkETGRpYFNEETMETNVEGVFIAG 291
Cdd:pfam07992 224 DGVEVILKDGTEIDADLVVVAIGRRPNTELLEAAGLELD-ERGG-IVVDEYLRTSVPGIYAAG 284
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
1-291 |
1.34e-20 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 91.78 E-value: 1.34e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 1 MIQEKAIIIGGGPCGLSAAIHLKQIGIDALVIEKGNV------VNSIynyPThQTFFSSSEKLE-IGDVAFITENRKPVR 73
Cdd:PRK06292 1 MEKYDVIVIGAGPAGYVAARRAAKLGKKVALIEKGPLggtclnVGCI---PS-KALIAAAEAFHeAKHAEEFGIHADGPK 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 74 IQalsyYREVVKRKNIRVNAF--EMVHKVTKTENDTF-----------VIETSKETYTTPYCIIATGYyDHPNymnVPGE 140
Cdd:PRK06292 77 ID----FKKVMARVRRERDRFvgGVVEGLEKKPKIDKikgtarfvdpnTVEVNGERIEAKNIVIATGS-RVPP---IPGV 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 141 NLPkvfhyfkEGHPYFD-----------KDVVVIGGknsSVdAALEL--VKS--GARVTVLyrgnEYSPSIkpwiLPEFE 205
Cdd:PRK06292 149 WLI-------LGDRLLTsddafeldklpKSLAVIGG---GV-IGLELgqALSrlGVKVTVF----ERGDRI----LPLED 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 206 ALVRN-------GTIRMEFGACVEKIT---EDEVVYRSGEKELITIKNDFVFAMTGYHP--DHQFLEKIGVEIDkETGRP 273
Cdd:PRK06292 210 PEVSKqaqkilsKEFKIKLGAKVTSVEksgDEKVEELEKGGKTETIEADYVLVATGRRPntDGLGLENTGIELD-ERGRP 288
|
330
....*....|....*...
gi 516292591 274 YFNEeTMETNVEGVFIAG 291
Cdd:PRK06292 289 VVDE-HTQTSVPGIYAAG 305
|
|
| GltD |
COG0493 |
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ... |
8-291 |
1.30e-16 |
|
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 440259 [Multi-domain] Cd Length: 434 Bit Score: 79.79 E-value: 1.30e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 8 IIGGGPCGLSAAIHLKQIGIDALVIEK----GNVVnsIYNYPTHqtffssseKLEigdvafitenrkpvriqalsyyREV 83
Cdd:COG0493 126 VVGSGPAGLAAAYQLARAGHEVTVFEAldkpGGLL--RYGIPEF--------RLP----------------------KDV 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 84 VKRkniRVNAFEM--VHKVTKTE-NDTFVIETSKETYTtpYCIIATGYYDhPNYMNVPGENLPKVF-----------HYF 149
Cdd:COG0493 174 LDR---EIELIEAlgVEFRTNVEvGKDITLDELLEEFD--AVFLATGAGK-PRDLGIPGEDLKGVHsamdfltavnlGEA 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 150 KEGHPYFDKDVVVIGGKNSSVDAALELVKSGAR-VTVLYR-GNEYSPS--------------IKPWILP-EFEAlVRNG- 211
Cdd:COG0493 248 PDTILAVGKRVVVIGGGNTAMDCARTALRLGAEsVTIVYRrTREEMPAskeeveealeegveFLFLVAPvEIIG-DENGr 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 212 -----TIRMEFGACVEkitEDEVVYRSGEKELITIKNDFVFAMTGYHPDHQFLEK-IGVEIDKeTGRPYFNEETMETNVE 285
Cdd:COG0493 327 vtgleCVRMELGEPDE---SGRRRPVPIEGSEFTLPADLVILAIGQTPDPSGLEEeLGLELDK-RGTIVVDEETYQTSLP 402
|
....*.
gi 516292591 286 GVFIAG 291
Cdd:COG0493 403 GVFAGG 408
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
7-291 |
6.56e-16 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 77.82 E-value: 6.56e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 7 IIIGGGPCGLSAAIHLKQIGIDALVIEKGNV----VNS--IynyPThQTFFSSSEKLEIGDVAfiteNRKPVRIQALSY- 79
Cdd:COG1249 7 VVIGAGPGGYVAAIRAAQLGLKVALVEKGRLggtcLNVgcI---PS-KALLHAAEVAHEARHA----AEFGISAGAPSVd 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 80 YREVVKRKNIRVNAF-EMVHKVTKTENDTFV-----------IE-TSKETYTTPYCIIATGYydHPNYMNVPGEnlpkvf 146
Cdd:COG1249 79 WAALMARKDKVVDRLrGGVEELLKKNGVDVIrgrarfvdphtVEvTGGETLTADHIVIATGS--RPRVPPIPGL------ 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 147 hyfkEGHPYFD-----------KDVVVIGGknsSVdAALELV----KSGARVTVLYRGNEyspsikpwILPEF------- 204
Cdd:COG1249 151 ----DEVRVLTsdealeleelpKSLVVIGG---GY-IGLEFAqifaRLGSEVTLVERGDR--------LLPGEdpeisea 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 205 --EALVRNGtIRMEFGACVEKITEDE----VVYRSGEKElITIKNDFVFAMTGYHP--DHQFLEKIGVEIDkETGRPYFN 276
Cdd:COG1249 215 leKALEKEG-IDILTGAKVTSVEKTGdgvtVTLEDGGGE-EAVEADKVLVATGRRPntDGLGLEAAGVELD-ERGGIKVD 291
|
330
....*....|....*
gi 516292591 277 eETMETNVEGVFIAG 291
Cdd:COG1249 292 -EYLRTSVPGIYAIG 305
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
81-291 |
1.48e-15 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 76.00 E-value: 1.48e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 81 REVVKRKNIRVNafeMVHKVTK--TENDTFVIET-SKETYTtpYCIIATGyyDHPNYMNVPGENLPKVFH---------- 147
Cdd:COG0446 43 PESFERKGIDVR---TGTEVTAidPEAKTVTLRDgETLSYD--KLVLATG--ARPRPPPIPGLDLPGVFTlrtlddadal 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 148 --YFKEGHPyfdKDVVVIGGKNSSVDAALELVKSGARVTVLYRgneySPSIKPWILPEF-----EALVRNGtIRMEFGAC 220
Cdd:COG0446 116 reALKEFKG---KRAVVIGGGPIGLELAEALRKRGLKVTLVER----APRLLGVLDPEMaalleEELREHG-VELRLGET 187
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 516292591 221 VEKITEDE---VVYRSGEkeliTIKNDFVFAMTGYHPDHQFLEKIGVEIDKETGRPyfNEETMETNVEGVFIAG 291
Cdd:COG0446 188 VVAIDGDDkvaVTLTDGE----EIPADLVVVAPGVRPNTELAKDAGLALGERGWIK--VDETLQTSDPDVYAAG 255
|
|
| PRK11749 |
PRK11749 |
dihydropyrimidine dehydrogenase subunit A; Provisional |
8-296 |
1.13e-13 |
|
dihydropyrimidine dehydrogenase subunit A; Provisional
Pssm-ID: 236967 [Multi-domain] Cd Length: 457 Bit Score: 71.36 E-value: 1.13e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 8 IIGGGPCGLSAAIHLKQIGidalviekgnvvnsiynyptHQ-TFFSSSEK----LEIGDVAFitenRKPVRIQAlsyyRE 82
Cdd:PRK11749 145 VIGAGPAGLTAAHRLARKG--------------------YDvTIFEARDKagglLRYGIPEF----RLPKDIVD----RE 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 83 VVKRKNIRVNaFEMVHKVTKTendtFVIETSKETYTTpyCIIATGYYDhPNYMNVPGENLPKVFH---YFKE---GHPYF 156
Cdd:PRK11749 197 VERLLKLGVE-IRTNTEVGRD----ITLDELRAGYDA--VFIGTGAGL-PRFLGIPGENLGGVYSavdFLTRvnqAVADY 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 157 D----KDVVVIGGKNSSVDAALELVKSGAR-VTVLYRGNEY--SPSIKpwilpEFEALVRNGtIRMEFGACVEKITEDEV 229
Cdd:PRK11749 269 DlpvgKRVVVIGGGNTAMDAARTAKRLGAEsVTIVYRRGREemPASEE-----EVEHAKEEG-VEFEWLAAPVEILGDEG 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 230 VYR--------------SG------EKELITIKNDFVFAMTGYHPDHQFLEKI-GVEIDKEtGRPYFNEETMETNVEGVF 288
Cdd:PRK11749 343 RVTgvefvrmelgepdaSGrrrvpiEGSEFTLPADLVIKAIGQTPNPLILSTTpGLELNRW-GTIIADDETGRTSLPGVF 421
|
....*...
gi 516292591 289 IAGVIAAG 296
Cdd:PRK11749 422 AGGDIVTG 429
|
|
| PRK12770 |
PRK12770 |
putative glutamate synthase subunit beta; Provisional |
5-296 |
1.47e-11 |
|
putative glutamate synthase subunit beta; Provisional
Pssm-ID: 237197 [Multi-domain] Cd Length: 352 Bit Score: 64.63 E-value: 1.47e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 5 KAIIIGGGPCGLSAAIHLKQIGIDALVIEK-----GNVVNSIynyPTH----QTFFSSSEKLEIGDVAFIT-----ENRK 70
Cdd:PRK12770 20 KVAIIGAGPAGLAAAGYLACLGYEVHVYDKlpepgGLMLFGI---PEFripiERVREGVKELEEAGVVFHTrtkvcCGEP 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 71 PVRIQALSYYREVVKRKNIrVNAFEMVhkvtktendtfvietsketyttpycIIATGYYdHPNYMNVPGENLPKV----- 145
Cdd:PRK12770 97 LHEEEGDEFVERIVSLEEL-VKKYDAV-------------------------LIATGTW-KSRKLGIPGEDLPGVysale 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 146 ----FHYFKEGH-------PYFDKDVVVIGGKNSSVDAALELVKSGA-RVTVLY-RGNEYSPSIKpwilPEFEALVRNGT 212
Cdd:PRK12770 150 ylfrIRAAKLGYlpwekvpPVEGKKVVVVGAGLTAVDAALEAVLLGAeKVYLAYrRTINEAPAGK----YEIERLIARGV 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 213 IRMEFGACVEKITEDEV---------------------VYRSGEKELITIknDFVFAMTGYHPDHQF-LEKIGVEIDKEt 270
Cdd:PRK12770 226 EFLELVTPVRIIGEGRVegvelakmrlgepdesgrprpVPIPGSEFVLEA--DTVVFAIGEIPTPPFaKECLGIELNRK- 302
|
330 340
....*....|....*....|....*.
gi 516292591 271 GRPYFNEETMeTNVEGVFIAGVIAAG 296
Cdd:PRK12770 303 GEIVVDEKHM-TSREGVFAAGDVVTG 327
|
|
| NirB |
COG1251 |
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; |
7-299 |
1.66e-09 |
|
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
Pssm-ID: 440863 [Multi-domain] Cd Length: 402 Bit Score: 58.23 E-value: 1.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 7 IIIGGGPCGLSAAIHLKQIGIDA--LVIEKGNVVNsiYNYP------THQTffsSSEKLEIGDVAFITENRkpVRIqals 78
Cdd:COG1251 5 VIIGAGMAGVRAAEELRKLDPDGeiTVIGAEPHPP--YNRPplskvlAGET---DEEDLLLRPADFYEENG--IDL---- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 79 yyrevvkRKNIRVNAFEMVHKVTKTENDTfvietsketyTTPY--CIIATGyyDHPNYMNVPGENLPKVFHY-------- 148
Cdd:COG1251 74 -------RLGTRVTAIDRAARTVTLADGE----------TLPYdkLVLATG--SRPRVPPIPGADLPGVFTLrtlddada 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 149 ----FKEGhpyfdKDVVVIGGKNSSVDAALELVKSGARVTVLYRGneyspsikPWILP--------EF--EALVRNGtIR 214
Cdd:COG1251 135 lraaLAPG-----KRVVVIGGGLIGLEAAAALRKRGLEVTVVERA--------PRLLPrqldeeagALlqRLLEALG-VE 200
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 215 MEFGACVEKITEDEVVYR----SGEkeliTIKNDFVFAMTGYHPDHQFLEKIGVEIDK--ETGrpyfneETMETNVEGVF 288
Cdd:COG1251 201 VRLGTGVTEIEGDDRVTGvrlaDGE----ELPADLVVVAIGVRPNTELARAAGLAVDRgiVVD------DYLRTSDPDIY 270
|
330
....*....|.
gi 516292591 289 IAGVIAAGNNA 299
Cdd:COG1251 271 AAGDCAEHPGP 281
|
|
| PRK12814 |
PRK12814 |
putative NADPH-dependent glutamate synthase small subunit; Provisional |
135-291 |
2.99e-09 |
|
putative NADPH-dependent glutamate synthase small subunit; Provisional
Pssm-ID: 139246 [Multi-domain] Cd Length: 652 Bit Score: 58.20 E-value: 2.99e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 135 MNVPGENLPKV------FHYFKEG---HPyfDKDVVVIGGKNSSVDAALELVKSGAR-VTVLY-RGNEYSP--------- 194
Cdd:PRK12814 294 MGIPGEELPGVisgidfLRNVALGtalHP--GKKVVVIGGGNTAIDAARTALRLGAEsVTILYrRTREEMPanraeieea 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 195 -----SIKPWILPEFEALVRNGT----IRMEFGAcvekitEDEvvyrSGEKELI-------TIKNDFVFAMTGYHPDHQF 258
Cdd:PRK12814 372 laegvSLRELAAPVSIERSEGGLeltaIKMQQGE------PDE----SGRRRPVpvegsefTLQADTVISAIGQQVDPPI 441
|
170 180 190
....*....|....*....|....*....|...
gi 516292591 259 LEKIGVEIDKEtGRPYFNEETMETNVEGVFIAG 291
Cdd:PRK12814 442 AEAAGIGTSRN-GTVKVDPETLQTSVAGVFAGG 473
|
|
| PRK15317 |
PRK15317 |
alkyl hydroperoxide reductase subunit F; Provisional |
7-300 |
3.03e-09 |
|
alkyl hydroperoxide reductase subunit F; Provisional
Pssm-ID: 237942 [Multi-domain] Cd Length: 517 Bit Score: 57.86 E-value: 3.03e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 7 IIIGGGPCGLSAAIHLKQIGID-ALVIEK-GNVVN---SIYNypthqtFFSSSEkleigdvafiTENRKPVriQALsyyR 81
Cdd:PRK15317 215 LVVGGGPAGAAAAIYAARKGIRtGIVAERfGGQVLdtmGIEN------FISVPE----------TEGPKLA--AAL---E 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 82 EVVKRKNIRVNAFEMVHKVTKTEnDTFVIET-SKETYTTPYCIIATGYydHPNYMNVPGENlpkvfHYFKEG-----H-- 153
Cdd:PRK15317 274 EHVKEYDVDIMNLQRASKLEPAA-GLIEVELaNGAVLKAKTVILATGA--RWRNMNVPGED-----EYRNKGvaycpHcd 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 154 -PYF-DKDVVVIGGKNSSVDAALELVKSGARVTVLyrgnEYSPSIKPwilpeFEALVR------NGTIRMEfgACVEKIT 225
Cdd:PRK15317 346 gPLFkGKRVAVIGGGNSGVEAAIDLAGIVKHVTVL----EFAPELKA-----DQVLQDklrslpNVTIITN--AQTTEVT 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 226 EDE-----VVY--RSGEkELITIKNDFVFAMTGYHPDHQFLE------KIG-VEIDkETGrpyfneetmETNVEGVFIAG 291
Cdd:PRK15317 415 GDGdkvtgLTYkdRTTG-EEHHLELEGVFVQIGLVPNTEWLKgtvelnRRGeIIVD-ARG---------ATSVPGVFAAG 483
|
330
....*....|....*....
gi 516292591 292 ----------VIAAGNNAN 300
Cdd:PRK15317 484 dcttvpykqiIIAMGEGAK 502
|
|
| PRK06416 |
PRK06416 |
dihydrolipoamide dehydrogenase; Reviewed |
7-296 |
3.94e-09 |
|
dihydrolipoamide dehydrogenase; Reviewed
Pssm-ID: 235798 [Multi-domain] Cd Length: 462 Bit Score: 57.46 E-value: 3.94e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 7 IIIGGGPCGLSAAIHLKQIGIDALVIEKGNV----VN-------------SIYNYPTHqtffssSEKLEIgDVAFITENR 69
Cdd:PRK06416 8 IVIGAGPGGYVAAIRAAQLGLKVAIVEKEKLggtcLNrgcipskallhaaERADEARH------SEDFGI-KAENVGIDF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 70 KPVRiqalSYYREVVKRKN------IRVNAFEMVHKVTK-TENDTFVIETSK--ETYTTPYCIIATGYYdhpnymnvpge 140
Cdd:PRK06416 81 KKVQ----EWKNGVVNRLTggveglLKKNKVDIIRGEAKlVDPNTVRVMTEDgeQTYTAKNIILATGSR----------- 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 141 nlPKVFHYFKEGH------------PYFDKDVVVIGG-----KNSSVDAALelvksGARVTVLyrgnEYSPSIkpwiLPE 203
Cdd:PRK06416 146 --PRELPGIEIDGrviwtsdealnlDEVPKSLVVIGGgyigvEFASAYASL-----GAEVTIV----EALPRI----LPG 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 204 FE---------ALVRNGtIRMEFGACVEKITEDE----VVYRSGEKELiTIKNDFVFAMTGYHP--DHQFLEKIGVEIDK 268
Cdd:PRK06416 211 EDkeisklaerALKKRG-IKIKTGAKAKKVEQTDdgvtVTLEDGGKEE-TLEADYVLVAVGRRPntENLGLEELGVKTDR 288
|
330 340 350
....*....|....*....|....*....|.
gi 516292591 269 ---ETgrpyfnEETMETNVEGVFIAGVIAAG 296
Cdd:PRK06416 289 gfiEV------DEQLRTNVPNIYAIGDIVGG 313
|
|
| Ndh |
COG1252 |
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; |
7-295 |
8.27e-09 |
|
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
Pssm-ID: 440864 [Multi-domain] Cd Length: 386 Bit Score: 56.29 E-value: 8.27e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 7 IIIGGGPCGLSAAIHLKQI---GIDALVIEKGNVvnsiYNYPT--HQTFFSSsekLEIGDVAFitenrkPvriqalsyYR 81
Cdd:COG1252 5 VIVGGGFAGLEAARRLRKKlggDAEVTLIDPNPY----HLFQPllPEVAAGT---LSPDDIAI------P--------LR 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 82 EVVKRKNIRVnafemVH-KVTK--TENDTfVIETSKETYTTPYCIIATGYydHPNYMNVPG--ENLP------------- 143
Cdd:COG1252 64 ELLRRAGVRF-----IQgEVTGidPEART-VTLADGRTLSYDYLVIATGS--VTNFFGIPGlaEHALplktledalalre 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 144 KVFHYFKEGHPYFDKDVVVIGGKNSSVDAALELV-------------KSGARVTVLYRGneyspsikPWILPEF------ 204
Cdd:COG1252 136 RLLAAFERAERRRLLTIVVVGGGPTGVELAGELAellrkllrypgidPDKVRITLVEAG--------PRILPGLgeklse 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 205 ---EALVRNGtIRMEFGACVEKITEDEVVYRSGEkeliTIKNDFVFAMTGYHPdHQFLEKIGVEIDkETGRPYFNeETME 281
Cdd:COG1252 208 aaeKELEKRG-VEVHTGTRVTEVDADGVTLEDGE----EIPADTVIWAAGVKA-PPLLADLGLPTD-RRGRVLVD-PTLQ 279
|
330
....*....|....*
gi 516292591 282 T-NVEGVFIAGVIAA 295
Cdd:COG1252 280 VpGHPNVFAIGDCAA 294
|
|
| TIGR00275 |
TIGR00275 |
flavoprotein, HI0933 family; The model when searched with a partial length search brings in ... |
7-127 |
1.06e-08 |
|
flavoprotein, HI0933 family; The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae. [Unknown function, Enzymes of unknown specificity]
Pssm-ID: 272992 [Multi-domain] Cd Length: 400 Bit Score: 56.07 E-value: 1.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 7 IIIGGGPCGLSAAIHLKQIGIDALVIEKG---------------NVVNS------IYNYPTHQTFFSSS----------- 54
Cdd:TIGR00275 1 IIIGGGAAGLMAAITAARAGLSVLLLEKNkkigkkllisgggrcNLTNScptpefVAYYPRNGKFLRSAlsrfsnkdlid 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 55 --EKLEI-------GDVAFITENRKPVrIQALsyyREVVKRKNIRVNAFEMVHKVTKTENdTFVIETSKETYTTPYCIIA 125
Cdd:TIGR00275 81 ffESLGLelkveedGRVFPCSDSAADV-LDAL---LNELKELGVEILTNSKVKSIEKEDG-GFGVETSGGEYEADKVIIA 155
|
..
gi 516292591 126 TG 127
Cdd:TIGR00275 156 TG 157
|
|
| PRK12831 |
PRK12831 |
putative oxidoreductase; Provisional |
4-296 |
1.68e-07 |
|
putative oxidoreductase; Provisional
Pssm-ID: 183780 [Multi-domain] Cd Length: 464 Bit Score: 52.33 E-value: 1.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 4 EKAIIIGGGPCGLSAAIHLKQIGIDALVIEK----GNVVnsIYNYPthqtffsssekleigdvafitENRKP----VRiq 75
Cdd:PRK12831 141 KKVAVIGSGPAGLTCAGDLAKMGYDVTIFEAlhepGGVL--VYGIP---------------------EFRLPketvVK-- 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 76 alsyyREVVKRKNIRVNaFEMVHKVTKTendtFVIETSKETYTTPYCIIATGYyDHPNYMNVPGENLPKVF--------- 146
Cdd:PRK12831 196 -----KEIENIKKLGVK-IETNVVVGKT----VTIDELLEEEGFDAVFIGSGA-GLPKFMGIPGENLNGVFsanefltrv 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 147 HYFKEGHPYFD------KDVVVIGGKNSSVDAALELVKSGARVTVLY-RGNEYSPS-------------IKPWILPEFEA 206
Cdd:PRK12831 265 NLMKAYKPEYDtpikvgKKVAVVGGGNVAMDAARTALRLGAEVHIVYrRSEEELPArveevhhakeegvIFDLLTNPVEI 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 207 LV-RNGT------IRMEFGAcvekitEDEVVYRS---GEKELITIKNDFVFAMTGYHPDHQFLEKI-GVEIDKEtGRPYF 275
Cdd:PRK12831 345 LGdENGWvkgmkcIKMELGE------PDASGRRRpveIEGSEFVLEVDTVIMSLGTSPNPLISSTTkGLKINKR-GCIVA 417
|
330 340
....*....|....*....|.
gi 516292591 276 NEETMETNVEGVFIAGVIAAG 296
Cdd:PRK12831 418 DEETGLTSKEGVFAGGDAVTG 438
|
|
| HI0933_like |
pfam03486 |
HI0933-like protein; |
5-127 |
3.35e-07 |
|
HI0933-like protein;
Pssm-ID: 427330 [Multi-domain] Cd Length: 406 Bit Score: 51.43 E-value: 3.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 5 KAIIIGGGPCGLSAAIHLKQIGIDALVIEKG---------------NVVNS-------IYNYPTHQTFFSSS-------- 54
Cdd:pfam03486 2 DVIVIGGGAAGLMAAISAAKRGRRVLLIEKGkklgrkilisgggrcNVTNLseepdnfLSRYPGNPKFLKSAlsrftpwd 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 55 -----EKLEIgdvAFITENRK---PVRIQAlsyyREVV-------KRKNIRVNAFEMVHKVTKTENDTFVIETSKETYTT 119
Cdd:pfam03486 82 fiaffESLGV---PLKEEDHGrlfPDSDKA----SDIVdallnelKELGVKIRLRTRVLSVEKDDDGRFRVKTGGEELEA 154
|
....*...
gi 516292591 120 PYCIIATG 127
Cdd:pfam03486 155 DSLVLATG 162
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
5-38 |
1.60e-06 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 49.45 E-value: 1.60e-06
10 20 30
....*....|....*....|....*....|....
gi 516292591 5 KAIIIGGGPCGLSAAIHLKQIGIDALVIEKGNVV 38
Cdd:COG1232 3 RVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRV 36
|
|
| PRK12778 |
PRK12778 |
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ... |
5-191 |
1.86e-06 |
|
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;
Pssm-ID: 237200 [Multi-domain] Cd Length: 752 Bit Score: 49.36 E-value: 1.86e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 5 KAIIIGGGPCGLSAAIHLKQIGIDALVIEKgnvvnsiynypTHqtffssseklEIGDVAF--ITENRKPVRIqalsYYRE 82
Cdd:PRK12778 433 KVAVIGSGPAGLSFAGDLAKRGYDVTVFEA-----------LH----------EIGGVLKygIPEFRLPKKI----VDVE 487
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 83 VVKRKNIRVNaFEMVHKVTKTENdtfVIETSKETYTTpyCIIATGYyDHPNYMNVPGENLPKVF---------HYFKEGH 153
Cdd:PRK12778 488 IENLKKLGVK-FETDVIVGKTIT---IEELEEEGFKG--IFIASGA-GLPNFMNIPGENSNGVMssneyltrvNLMDAAS 560
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 516292591 154 PYFD------KDVVVIGGKNSSVDAALELVKSGA-RVTVLYRGNE 191
Cdd:PRK12778 561 PDSDtpikfgKKVAVVGGGNTAMDSARTAKRLGAeRVTIVYRRSE 605
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
1-34 |
2.75e-06 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 48.40 E-value: 2.75e-06
10 20 30
....*....|....*....|....*....|....
gi 516292591 1 MIQEKAIIIGGGPCGLSAAIHLKQIGIDALVIEK 34
Cdd:COG0654 1 MMRTDVLIVGGGPAGLALALALARAGIRVTVVER 34
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
8-55 |
1.27e-05 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 42.52 E-value: 1.27e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 516292591 8 IIGGGPCGLSAAIHLKQIGIDALVIEKGNVV----------NSIYNYPTHqTFFSSSE 55
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLggnaysyrvpGYVFDYGAH-IFHGSDE 57
|
|
| gltD |
PRK12810 |
glutamate synthase subunit beta; Reviewed |
123-291 |
2.33e-05 |
|
glutamate synthase subunit beta; Reviewed
Pssm-ID: 237213 [Multi-domain] Cd Length: 471 Bit Score: 45.54 E-value: 2.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 123 IIATGYYDhPNYMNVPGENLPKVfHY------------FKEGHPYF----DKDVVVIGGKNSSVDAALELVKSGAR-VTV 185
Cdd:PRK12810 233 FLGTGAYK-PRDLGIPGRDLDGV-HFamdfliqntrrvLGDETEPFisakGKHVVVIGGGDTGMDCVGTAIRQGAKsVTQ 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 186 LYRGNEySPS--IKPWILPEFEALVR------NGTIRMEFGACVEKITED---------EVVYRSGEKELI-----TIKN 243
Cdd:PRK12810 311 RDIMPM-PPSrrNKNNPWPYWPMKLEvsnaheEGVEREFNVQTKEFEGENgkvtgvkvvRTELGEGDFEPVegsefVLPA 389
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 516292591 244 DFVF-AMTGYHPDHQFLEKIGVEIDkETGRPYFNEETMETNVEGVFIAG 291
Cdd:PRK12810 390 DLVLlAMGFTGPEAGLLAQFGVELD-ERGRVAAPDNAYQTSNPKVFAAG 437
|
|
| PRK12779 |
PRK12779 |
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; ... |
132-188 |
2.38e-05 |
|
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional
Pssm-ID: 183740 [Multi-domain] Cd Length: 944 Bit Score: 45.98 E-value: 2.38e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 516292591 132 PNYMNVPGENLPKVF---------HYFKEGHPYFD--------KDVVVIGGKNSSVDAALELVKSGARVTVLYR 188
Cdd:PRK12779 405 PTFMNVPGEHLLGVMsanefltrvNLMRGLDDDYEtplpevkgKEVFVIGGGNTAMDAARTAKRLGGNVTIVYR 478
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
1-38 |
7.17e-05 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 44.07 E-value: 7.17e-05
10 20 30
....*....|....*....|....*....|....*...
gi 516292591 1 MIQEKAIIIGGGPCGLSAAIHLKQIGIDALVIEKGNVV 38
Cdd:COG1233 1 MMMYDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTP 38
|
|
| PRK07208 |
PRK07208 |
hypothetical protein; Provisional |
5-81 |
7.81e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 235967 [Multi-domain] Cd Length: 479 Bit Score: 44.11 E-value: 7.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 5 KAIIIGGGPCGLSAAIHLKQIGIDALVIEKGNVVNSIYNYPTHQ---------TFFSSSEKL-----EI--GDVaFITEN 68
Cdd:PRK07208 6 SVVIIGAGPAGLTAAYELLKRGYPVTVLEADPVVGGISRTVTYKgnrfdigghRFFSKSPEVmdlwnEIlpDDD-FLLRP 84
|
90
....*....|...
gi 516292591 69 RKPvRIqalsYYR 81
Cdd:PRK07208 85 RLS-RI----YYR 92
|
|
| PLN02172 |
PLN02172 |
flavin-containing monooxygenase FMO GS-OX |
8-236 |
8.39e-05 |
|
flavin-containing monooxygenase FMO GS-OX
Pssm-ID: 215116 [Multi-domain] Cd Length: 461 Bit Score: 44.08 E-value: 8.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 8 IIGGGPCGLSAAIHLKQIGIDALVIEKGNVVNSIYNY------------PT----HQTFFSS------SEKLEIGDVAFI 65
Cdd:PLN02172 15 VIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWVYtpksesdplsldPTrsivHSSVYESlrtnlpRECMGYRDFPFV 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 66 ----TENRKPVRI----QALSYYREVVKRKNIRvnafEMVH---KVTKTE--NDTFVIETSK-------ETYTTpyCIIA 125
Cdd:PLN02172 95 prfdDESRDSRRYpshrEVLAYLQDFAREFKIE----EMVRfetEVVRVEpvDGKWRVQSKNsggfskdEIFDA--VVVC 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 126 TGYYDHPNYMNVPG-ENLPKV---FHYFKEGHPYFDKDVVVIGGKNSSVDAALELVKSGARVTVLYRGNEYS-------P 194
Cdd:PLN02172 169 NGHYTEPNVAHIPGiKSWPGKqihSHNYRVPDPFKNEVVVVIGNFASGADISRDIAKVAKEVHIASRASESDtyeklpvP 248
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 516292591 195 SIKPWILPEFEALVRNGTIRMEFGACVEKiteDEVVYRSGEK 236
Cdd:PLN02172 249 QNNLWMHSEIDTAHEDGSIVFKNGKVVYA---DTIVHCTGYK 287
|
|
| COG2509 |
COG2509 |
FAD-dependent dehydrogenase [General function prediction only]; |
1-38 |
1.05e-04 |
|
FAD-dependent dehydrogenase [General function prediction only];
Pssm-ID: 441999 [Multi-domain] Cd Length: 466 Bit Score: 43.56 E-value: 1.05e-04
10 20 30
....*....|....*....|....*....|....*...
gi 516292591 1 MIQEKAIIIGGGPCGLSAAIHLKQIGIDALVIEKGNVV 38
Cdd:COG2509 28 SLKYDVVIVGAGPAGLFAALELAEAGLKPLVLERGKDV 65
|
|
| PRK13748 |
PRK13748 |
putative mercuric reductase; Provisional |
161-291 |
2.59e-04 |
|
putative mercuric reductase; Provisional
Pssm-ID: 184298 [Multi-domain] Cd Length: 561 Bit Score: 42.45 E-value: 2.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 161 VVIGgknSSVdAALELVKS----GARVTVLYRGNEYS---PSIKpwilpefEALvrNGTIRMEFGACVEKITEDEVVYRS 233
Cdd:PRK13748 274 AVIG---SSV-VALELAQAfarlGSKVTILARSTLFFredPAIG-------EAV--TAAFRAEGIEVLEHTQASQVAHVD 340
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 516292591 234 GEKELIT----IKNDFVFAMTGYHPDHQF--LEKIGVEIDKEtGRPYFNeETMETNVEGVFIAG 291
Cdd:PRK13748 341 GEFVLTTghgeLRADKLLVATGRAPNTRSlaLDAAGVTVNAQ-GAIVID-QGMRTSVPHIYAAG 402
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
5-37 |
2.81e-04 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 42.20 E-value: 2.81e-04
10 20 30
....*....|....*....|....*....|...
gi 516292591 5 KAIIIGGGPCGLSAAIHLKQIGIDALVIEKGNV 37
Cdd:COG0665 4 DVVVIGGGIAGLSTAYHLARRGLDVTVLERGRP 36
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
6-53 |
2.86e-04 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 42.27 E-value: 2.86e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 516292591 6 AIIIGGGPCGLSAAIHLKQIGIDALVIEKGNVVNSiynypthQTFFSS 53
Cdd:pfam00890 2 VLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFGG-------ATAWSS 42
|
|
| FAD_binding_3 |
pfam01494 |
FAD binding domain; This domain is involved in FAD binding in a number of enzymes. |
7-34 |
3.70e-04 |
|
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
Pssm-ID: 396193 [Multi-domain] Cd Length: 348 Bit Score: 41.93 E-value: 3.70e-04
10 20
....*....|....*....|....*...
gi 516292591 7 IIIGGGPCGLSAAIHLKQIGIDALVIEK 34
Cdd:pfam01494 5 LIVGGGPAGLMLALLLARAGVRVVLVER 32
|
|
| PRK06126 |
PRK06126 |
hypothetical protein; Provisional |
1-35 |
5.11e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 235704 [Multi-domain] Cd Length: 545 Bit Score: 41.52 E-value: 5.11e-04
10 20 30
....*....|....*....|....*....|....*
gi 516292591 1 MIQEKAIIIGGGPCGLSAAIHLKQIGIDALVIEKG 35
Cdd:PRK06126 5 TSETPVLIVGGGPVGLALALDLGRRGVDSILVERK 39
|
|
| Pyr_redox |
pfam00070 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
160-230 |
5.77e-04 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 425450 [Multi-domain] Cd Length: 80 Bit Score: 37.95 E-value: 5.77e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 516292591 160 VVVIGGKNSSVDAALELVKSGARVTVLyrgnEYSPSIKPWILPEFEALVR-----NGtIRMEFGACVEKITEDEVV 230
Cdd:pfam00070 2 VVVVGGGYIGLELAGALARLGSKVTVV----ERRDRLLPGFDPEIAKILQeklekNG-IEFLLNTTVEAIEGNGDG 72
|
|
| GG-red-SF |
TIGR02032 |
geranylgeranyl reductase family; This model represents a subfamily which includes ... |
7-116 |
7.07e-04 |
|
geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]
Pssm-ID: 273936 [Multi-domain] Cd Length: 295 Bit Score: 40.77 E-value: 7.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 7 IIIGGGPCGLSAAIHLKQIGIDALVIEKGnvvnsiyNYPTHQT---FFS--SSEKLEIGDVAFITENRKPVRIqalSYYR 81
Cdd:TIGR02032 4 VVVGAGPAGASAAYRLADKGLRVLLLEKK-------SFPRYKPcggALSprALEELDLPGELIVNLVRGARFF---SPNG 73
|
90 100 110
....*....|....*....|....*....|....*
gi 516292591 82 EVVKRKNIRvnafEMVHKVTKTENDTFVIETSKET 116
Cdd:TIGR02032 74 DSVEIPIET----ELAYVIDRDAFDEQLAERAQEA 104
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
7-42 |
8.18e-04 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 40.97 E-value: 8.18e-04
10 20 30
....*....|....*....|....*....|....*...
gi 516292591 7 IIIGGGPCGLSAAIHLKQIGIDALVIEKGNVV--NSIY 42
Cdd:COG1053 7 VVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRggHTAA 44
|
|
| PRK12771 |
PRK12771 |
putative glutamate synthase (NADPH) small subunit; Provisional |
8-291 |
9.52e-04 |
|
putative glutamate synthase (NADPH) small subunit; Provisional
Pssm-ID: 237198 [Multi-domain] Cd Length: 564 Bit Score: 40.63 E-value: 9.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 8 IIGGGPCGLSAAIHLKQIGidalviekgnvvnsiynyptHQ-TFFSSSEKLEiGDVAF-ITENRKPvriqalsyyREVVK 85
Cdd:PRK12771 142 VIGGGPAGLSAAYHLRRMG--------------------HAvTIFEAGPKLG-GMMRYgIPAYRLP---------REVLD 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 86 RKNIRVNA----FEMVHKVTKtenDTFVIETSKEtYTTPYciIATGyyDH-PNYMNVPGENLPKVF------HYFKEGH- 153
Cdd:PRK12771 192 AEIQRILDlgveVRLGVRVGE---DITLEQLEGE-FDAVF--VAIG--AQlGKRLPIPGEDAAGVLdavdflRAVGEGEp 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 154 PYFDKDVVVIGGKNSSVDAALELVKSGA-RVTVLYRgneySPSIKPWILP-EFEALVRNGtIRMEFGACVEKITEDEV-- 229
Cdd:PRK12771 264 PFLGKRVVVIGGGNTAMDAARTARRLGAeEVTIVYR----RTREDMPAHDeEIEEALREG-VEINWLRTPVEIEGDENga 338
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 516292591 230 -------VYRSG----------EKELITIKNDFVFAMTGYHPDHQFLEKIGvEIDKETGRPYFNEETMETNVEGVFIAG 291
Cdd:PRK12771 339 tglrvitVEKMEldedgrpspvTGEEETLEADLVVLAIGQDIDSAGLESVP-GVEVGRGVVQVDPNFMMTGRPGVFAGG 416
|
|
| PRK13512 |
PRK13512 |
coenzyme A disulfide reductase; Provisional |
5-294 |
9.70e-04 |
|
coenzyme A disulfide reductase; Provisional
Pssm-ID: 184103 [Multi-domain] Cd Length: 438 Bit Score: 40.54 E-value: 9.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 5 KAIIIGGGPCGLSAAIHLKQIGIDALVIekgnvvnsIYNYPTHQTFFSSSEKLEIGDvafITENRKpvriQALSYYREVV 84
Cdd:PRK13512 3 KIIVVGAVAGGATCASQIRRLDKESDII--------IFEKDRDMSFANCALPYYIGE---VVEDRK----YALAYTPEKF 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 85 K-RKNIRVNAFemvHKVTKTENDTFVIET----SKETYTTPY--CIIATGY------YDHPNYMNVPG-ENLPKVFHYFK 150
Cdd:PRK13512 68 YdRKQITVKTY---HEVIAINDERQTVTVlnrkTNEQFEESYdkLILSPGAsanslgFESDITFTLRNlEDTDAIDQFIK 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 151 EGHPyfdKDVVVIGGKNSSVDAALELVKSGARVTVLYRGNEYSPSIKPWI-LPEFEALVRNGtIRMEFGACVEKITEDEV 229
Cdd:PRK13512 145 ANQV---DKALVVGAGYISLEVLENLYERGLHPTLIHRSDKINKLMDADMnQPILDELDKRE-IPYRLNEEIDAINGNEV 220
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 516292591 230 VYRSGEKElitiKNDFVFAMTGYHPDHQFLEKIGVEIDKETGRPYfnEETMETNVEGVFIAGVIA 294
Cdd:PRK13512 221 TFKSGKVE----HYDMIIEGVGTHPNSKFIESSNIKLDDKGFIPV--NDKFETNVPNIYAIGDII 279
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
11-35 |
1.01e-03 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 40.34 E-value: 1.01e-03
10 20
....*....|....*....|....*
gi 516292591 11 GGPCGLSAAIHLKQIGIDALVIEKG 35
Cdd:COG0644 1 AGPAGSAAARRLARAGLSVLLLEKG 25
|
|
| mhpA |
PRK06183 |
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase; |
8-45 |
1.12e-03 |
|
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
Pssm-ID: 235727 [Multi-domain] Cd Length: 500 Bit Score: 40.66 E-value: 1.12e-03
10 20 30
....*....|....*....|....*....|....*...
gi 516292591 8 IIGGGPCGLSAAIHLKQIGIDALVIEKgnvVNSIYNYP 45
Cdd:PRK06183 15 IVGAGPVGLTLANLLGQYGVRVLVLER---WPTLYDLP 49
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
5-40 |
1.24e-03 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 40.07 E-value: 1.24e-03
10 20 30
....*....|....*....|....*....|....*.
gi 516292591 5 KAIIIGGGPCGLSAAIHLKQIGIDALVIEKGNVVNS 40
Cdd:pfam01266 1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGS 36
|
|
| PRK06753 |
PRK06753 |
hypothetical protein; Provisional |
5-129 |
1.51e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 168661 [Multi-domain] Cd Length: 373 Bit Score: 40.06 E-value: 1.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 5 KAIIIGGGPCGLSAAIHLKQIGIDALVIEK--------------GNVVNSIYNYPTHQ----------TFFSSSEKLEIG 60
Cdd:PRK06753 2 KIAIIGAGIGGLTAAALLQEQGHEVKVFEKnesvkevgagigigDNVIKKLGNHDLAKgiknagqilsTMNLLDDKGTLL 81
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 516292591 61 DVAFITENRKPVRIQ-------ALSYYREvvkrknirvNAFEMVHKVTKTEND---TFVIETSKETYTTPYCIIATGYY 129
Cdd:PRK06753 82 NKVKLKSNTLNVTLHrqtlidiIKSYVKE---------DAIFTGKEVTKIENEtdkVTIHFADGESEAFDLCIGADGIH 151
|
|
| PRK06847 |
PRK06847 |
hypothetical protein; Provisional |
4-34 |
1.99e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 235874 [Multi-domain] Cd Length: 375 Bit Score: 39.47 E-value: 1.99e-03
10 20 30
....*....|....*....|....*....|.
gi 516292591 4 EKAIIIGGGPCGLSAAIHLKQIGIDALVIEK 34
Cdd:PRK06847 5 KKVLIVGGGIGGLSAAIALRRAGIAVDLVEI 35
|
|
| PRK07538 |
PRK07538 |
hypothetical protein; Provisional |
5-33 |
2.57e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 236046 [Multi-domain] Cd Length: 413 Bit Score: 39.11 E-value: 2.57e-03
10 20
....*....|....*....|....*....
gi 516292591 5 KAIIIGGGPCGLSAAIHLKQIGIDALVIE 33
Cdd:PRK07538 2 KVLIAGGGIGGLTLALTLHQRGIEVVVFE 30
|
|
| PTZ00052 |
PTZ00052 |
thioredoxin reductase; Provisional |
7-296 |
2.62e-03 |
|
thioredoxin reductase; Provisional
Pssm-ID: 185416 [Multi-domain] Cd Length: 499 Bit Score: 39.42 E-value: 2.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 7 IIIGGGPCGLSAAIHLKQIGIDALVIE-------------KGNVVN----------------SIYNYPTHQTFFSSSEKL 57
Cdd:PTZ00052 9 VVIGGGSGGMAAAKEAAAHGKKVALFDyvkpstqgtkwglGGTCVNvgcvpkklmhyaanigSIFHHDSQMYGWKTSSSF 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 58 EIGDVafITENRKPVRIQALSYyrevvkRKNIRVNAFEMVHKVTKTENDTFVI---ETSKETYTTPYCIIATGYYDHpny 134
Cdd:PTZ00052 89 NWGKL--VTTVQNHIRSLNFSY------RTGLRSSKVEYINGLAKLKDEHTVSygdNSQEETITAKYILIATGGRPS--- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 135 mnVPgENLPKVFHYFKEGHPYF--DKD---VVVIGGKNSSVDAALELVKSGARVTV-----LYRGNEYSPSIKPWI-LPE 203
Cdd:PTZ00052 158 --IP-EDVPGAKEYSITSDDIFslSKDpgkTLIVGASYIGLETAGFLNELGFDVTVavrsiPLRGFDRQCSEKVVEyMKE 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516292591 204 FEALVRNGTIRMEFGACVEKItedEVVYRSGEKELItiknDFVFAMTGYHPDHQF--LEKIGVEIDKETGRPYFNEetmE 281
Cdd:PTZ00052 235 QGTLFLEGVVPINIEKMDDKI---KVLFSDGTTELF----DTVLYATGRKPDIKGlnLNAIGVHVNKSNKIIAPND---C 304
|
330
....*....|....*
gi 516292591 282 TNVEGVFIAGVIAAG 296
Cdd:PTZ00052 305 TNIPNIFAVGDVVEG 319
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
7-33 |
4.04e-03 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 38.75 E-value: 4.04e-03
10 20
....*....|....*....|....*..
gi 516292591 7 IIIGGGPCGLSAAIHLKQIGIDALVIE 33
Cdd:COG1231 11 VIVGAGLAGLAAARELRKAGLDVTVLE 37
|
|
| PRK08132 |
PRK08132 |
FAD-dependent oxidoreductase; Provisional |
5-34 |
4.41e-03 |
|
FAD-dependent oxidoreductase; Provisional
Pssm-ID: 236158 [Multi-domain] Cd Length: 547 Bit Score: 38.70 E-value: 4.41e-03
10 20 30
....*....|....*....|....*....|
gi 516292591 5 KAIIIGGGPCGLSAAIHLKQIGIDALVIEK 34
Cdd:PRK08132 25 PVVVVGAGPVGLALAIDLAQQGVPVVLLDD 54
|
|
| PLN02976 |
PLN02976 |
amine oxidase |
5-33 |
5.22e-03 |
|
amine oxidase
Pssm-ID: 215527 [Multi-domain] Cd Length: 1713 Bit Score: 38.70 E-value: 5.22e-03
10 20
....*....|....*....|....*....
gi 516292591 5 KAIIIGGGPCGLSAAIHLKQIGIDALVIE 33
Cdd:PLN02976 695 KIIVVGAGPAGLTAARHLQRQGFSVTVLE 723
|
|
| CysG2 |
COG1648 |
Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme transport and ... |
157-214 |
7.48e-03 |
|
Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme transport and metabolism]; Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 441254 [Multi-domain] Cd Length: 211 Bit Score: 37.05 E-value: 7.48e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 516292591 157 DKDVVVIGGKNssvdAALE----LVKSGARVTVlyrgneYSPSIKpwilPEFEALVRNGTIR 214
Cdd:COG1648 12 GRRVLVVGGGE----VAARkarlLLKAGARVTV------VAPEFS----PELAALAEEGRIE 59
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
8-38 |
8.41e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 37.56 E-value: 8.41e-03
10 20 30
....*....|....*....|....*....|.
gi 516292591 8 IIGGGPCGLSAAIHLKQIGIDALVIEKGNVV 38
Cdd:PRK07233 4 IVGGGIAGLAAAYRLAKRGHEVTVFEADDQL 34
|
|
| Ubi-OHases |
TIGR01988 |
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a ... |
7-35 |
9.29e-03 |
|
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) making it difficult to ascribe a specific activity to each one. Eukaryotes appear to have only a single homolog in this subfamily (COQ6) which complements UbiH, but also possess a non-orthologous gene, COQ7 which complements UbiF. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]
Pssm-ID: 273913 [Multi-domain] Cd Length: 385 Bit Score: 37.57 E-value: 9.29e-03
10 20
....*....|....*....|....*....
gi 516292591 7 IIIGGGPCGLSAAIHLKQIGIDALVIEKG 35
Cdd:TIGR01988 3 VIVGGGMVGLALALALARSGLKVALIEAT 31
|
|
| |
