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Conserved domains on  [gi|516374353|ref|WP_017764386|]
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MULTISPECIES: DUF4250 domain-containing protein [Aeromonas]

Protein Classification

DUF4250 domain-containing protein( domain architecture ID 10624012)

DUF4250 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4250 pfam14056
Domain of unknown function (DUF4250); This family of proteins is functionally uncharacterized. ...
 8-61 1.35e-12

Domain of unknown function (DUF4250); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 60 amino acids in length. There are two completely conserved residues (N and R) that may be functionally important.


:

Pssm-ID: 464075  Cd Length: 54  Bit Score: 55.51  E-value: 1.35e-12
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 516374353   8 TMDVNMLLSLVNMQLRDRYDDLDDLCKAQDLDKAALVARLASGDFHYQEDQKQF 61
Cdd:pfam14056  1 PKDPVMLLSIVNTKLRDEYSSLDELCEDYDIDKEELEEKLASIGYEYDEEQNQF 54
 
Name Accession Description Interval E-value
DUF4250 pfam14056
Domain of unknown function (DUF4250); This family of proteins is functionally uncharacterized. ...
 8-61 1.35e-12

Domain of unknown function (DUF4250); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 60 amino acids in length. There are two completely conserved residues (N and R) that may be functionally important.


Pssm-ID: 464075  Cd Length: 54  Bit Score: 55.51  E-value: 1.35e-12
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 516374353   8 TMDVNMLLSLVNMQLRDRYDDLDDLCKAQDLDKAALVARLASGDFHYQEDQKQF 61
Cdd:pfam14056  1 PKDPVMLLSIVNTKLRDEYSSLDELCEDYDIDKEELEEKLASIGYEYDEEQNQF 54
 
Name Accession Description Interval E-value
DUF4250 pfam14056
Domain of unknown function (DUF4250); This family of proteins is functionally uncharacterized. ...
 8-61 1.35e-12

Domain of unknown function (DUF4250); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 60 amino acids in length. There are two completely conserved residues (N and R) that may be functionally important.


Pssm-ID: 464075  Cd Length: 54  Bit Score: 55.51  E-value: 1.35e-12
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 516374353   8 TMDVNMLLSLVNMQLRDRYDDLDDLCKAQDLDKAALVARLASGDFHYQEDQKQF 61
Cdd:pfam14056  1 PKDPVMLLSIVNTKLRDEYSSLDELCEDYDIDKEELEEKLASIGYEYDEEQNQF 54
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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