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Conserved domains on  [gi|516459771|ref|WP_017848609|]
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MULTISPECIES: sulfate ABC transporter permease subunit CysT [Pseudomonas]

Protein Classification

sulfate ABC transporter permease subunit CysT( domain architecture ID 10797746)

sulfate ABC transporter permease subunit CysT is part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
permease_CysT TIGR02139
sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two ...
 8-248 8.20e-132

sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]


:

Pssm-ID: 131194  Cd Length: 265  Bit Score: 373.58  E-value: 8.20e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771    8 VIPGFGLTLGYTVVYLSLIVLIPLAAMFVHAAQLTWDQFWNIITAPRVLAALKLSFSTALYAALINGLIGTLLAWVLVRY 87
Cdd:TIGR02139   1 VLPGFGLSLGVTLTYLSLIVLLPLAALFLKASQLGWAGFWQIITEPRVLAAYKLSFGTALIAALINAVFGTLLAWVLVRY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   88 TFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAADLGFKIAYSPLGITLALTFVTLPFVVRTVQPVLADIPR 167
Cdd:TIGR02139  81 RFPGKRIVDALVDLPFALPTAVAGIALATLYSPNGWIGSFLAPLGIKIAFTPLGIVIALVFVSLPFVVRTVQPVLEEIEK 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  168 EIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYDYHGATSI 247
Cdd:TIGR02139 161 ELEEAAASLGASRWQTFWRVILPALLPALLTGFALAFARAVGEYGSVIFIAGNLPMKTEIAPLLIFQKLEQYDYAGATAI 240


                  .
gi 516459771  248 G 248
Cdd:TIGR02139 241 A 241
 
Name Accession Description Interval E-value
permease_CysT TIGR02139
sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two ...
 8-248 8.20e-132

sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]


Pssm-ID: 131194  Cd Length: 265  Bit Score: 373.58  E-value: 8.20e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771    8 VIPGFGLTLGYTVVYLSLIVLIPLAAMFVHAAQLTWDQFWNIITAPRVLAALKLSFSTALYAALINGLIGTLLAWVLVRY 87
Cdd:TIGR02139   1 VLPGFGLSLGVTLTYLSLIVLLPLAALFLKASQLGWAGFWQIITEPRVLAAYKLSFGTALIAALINAVFGTLLAWVLVRY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   88 TFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAADLGFKIAYSPLGITLALTFVTLPFVVRTVQPVLADIPR 167
Cdd:TIGR02139  81 RFPGKRIVDALVDLPFALPTAVAGIALATLYSPNGWIGSFLAPLGIKIAFTPLGIVIALVFVSLPFVVRTVQPVLEEIEK 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  168 EIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYDYHGATSI 247
Cdd:TIGR02139 161 ELEEAAASLGASRWQTFWRVILPALLPALLTGFALAFARAVGEYGSVIFIAGNLPMKTEIAPLLIFQKLEQYDYAGATAI 240


                  .
gi 516459771  248 G 248
Cdd:TIGR02139 241 A 241
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 1-248 4.93e-126

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 359.06  E-value: 4.93e-126
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   1 MSRRispVIPGFGLTLGYTVVYLSLIVLIPLAAMFVHAAQLTWDQFWNIITAPRVLAALKLSFSTALYAALINGLIGTLL 80
Cdd:COG0555    1 MSRR---VLPGFGLTLGLTLLYLSLIVLLPLAALVLKAAGLGWAEFWAVLTSPRVLAALKLSLGTALIAALINLVFGLPL 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  81 AWVLVRYTFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAADLGFKIAYSPLGITLALTFVTLPFVVRTVQP 160
Cdd:COG0555   78 AWVLVRYRFPGKRLVDALVDLPFALPTAVAGIALLLLFGPNGWLGQLLAPLGIKVAFTPLGIVLAQTFVSLPFVVRTVQP 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771 161 VLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYD 240
Cdd:COG0555  158 VLEELDPELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARALGEFGAVIFIAGNLPMKTEILPLLIYLKLEEGD 237


                 ....*...
gi 516459771 241 YHGATSIG 248
Cdd:COG0555  238 YAGATAIA 245
PRK10971 PRK10971
sulfate/thiosulfate ABC transporter permease CysT;
8-247 1.35e-87

sulfate/thiosulfate ABC transporter permease CysT;


Pssm-ID: 182873  Cd Length: 277  Bit Score: 262.00  E-value: 1.35e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   8 VIPGFGLTLGYTVVYLSLIVLIPLAAMFVHAAQLTWDQFWNIITAPRVLAALKLSFSTALYAALINGLIGTLLAWVLVRY 87
Cdd:PRK10971   9 VLPGFTLSLGTSLLFVCLILLLPLSALVMQLSQMSWAQYWEVITNPQVVAAYKVTLLSAFVASIFNAVFGLLMAWILTRY 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  88 TFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAADLGFKIAYSPLGITLALTFVTLPFVVRTVQPVLADIPR 167
Cdd:PRK10971  89 RFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGWYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGP 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771 168 EIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYDYHGATSI 247
Cdd:PRK10971 169 EYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFVRLQEFDYPAASAI 248
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 59-247 6.03e-19

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 81.94  E-value: 6.03e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  59 LKLSFSTALYAALINGLIGTLLAWVLVRYTFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGlvgqfaaDLGFKIAYS 138
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLL-------GWGILPGLG 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771 139 PLGITLALTFVtLPFVVRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIA 218
Cdd:cd06261   74 LPALILALLLI-APFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLG 152

                        170       180
                 ....*....|....*....|....*....
gi 516459771 219 GNMPMKTEILPLLIMVKLDQYDYHGATSI 247
Cdd:cd06261  153 GGEAPGPGTGLLLIFAILFPGDLGVAAAV 181
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 59-248 3.85e-11

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 60.64  E-value: 3.85e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  59 LKLSFSTALYAALINGLIGTLLAWvlvrYTFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGLVGqfaadlGFKIAYS 138
Cdd:NF038017   2 LRVSGTATLIAALIGIPLGALLAL----RRFPGRRLVISLLNTLMGLPPVVVGLIVYLLLSRSGPLG------FLGLLYT 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771 139 PLGITLALTFVTLPFVVRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAwLTGFALAFARGVGEYGSVIFIA 218
Cdd:NF038017  72 PTAMIIAQAVLALPIVAGLTLAAVQGLDPELRLQILSLGATRWQALWTLLKEARFAL-LAAVLAGFGRAISEVGAVMMVG 150

                        170       180       190
                 ....*....|....*....|....*....|
gi 516459771 219 GNMPMKTEILPLLIMVKLDQYDYHGATSIG 248
Cdd:NF038017 151 GNIRGYTRVLTTAIVLETSKGNFDLALALG 180
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 77-223 2.94e-06

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 46.52  E-value: 2.94e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   77 GTLLAWVL-VRYTFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTglvgqfaadlgfKIAYSPLGITLALTFVTLPFVV 155
Cdd:pfam00528   1 GIPLGIIAaLRRGRRLDRLLRPLIDLLQALPSFVLAILLVVIAILS------------ILGHGILPAIILALLGWAGYAR 68

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 516459771  156 RTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPM 223
Cdd:pfam00528  69 LIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGL 136
 
Name Accession Description Interval E-value
permease_CysT TIGR02139
sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two ...
 8-248 8.20e-132

sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]


Pssm-ID: 131194  Cd Length: 265  Bit Score: 373.58  E-value: 8.20e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771    8 VIPGFGLTLGYTVVYLSLIVLIPLAAMFVHAAQLTWDQFWNIITAPRVLAALKLSFSTALYAALINGLIGTLLAWVLVRY 87
Cdd:TIGR02139   1 VLPGFGLSLGVTLTYLSLIVLLPLAALFLKASQLGWAGFWQIITEPRVLAAYKLSFGTALIAALINAVFGTLLAWVLVRY 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   88 TFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAADLGFKIAYSPLGITLALTFVTLPFVVRTVQPVLADIPR 167
Cdd:TIGR02139  81 RFPGKRIVDALVDLPFALPTAVAGIALATLYSPNGWIGSFLAPLGIKIAFTPLGIVIALVFVSLPFVVRTVQPVLEEIEK 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  168 EIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYDYHGATSI 247
Cdd:TIGR02139 161 ELEEAAASLGASRWQTFWRVILPALLPALLTGFALAFARAVGEYGSVIFIAGNLPMKTEIAPLLIFQKLEQYDYAGATAI 240


                  .
gi 516459771  248 G 248
Cdd:TIGR02139 241 A 241
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 1-248 4.93e-126

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 359.06  E-value: 4.93e-126
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   1 MSRRispVIPGFGLTLGYTVVYLSLIVLIPLAAMFVHAAQLTWDQFWNIITAPRVLAALKLSFSTALYAALINGLIGTLL 80
Cdd:COG0555    1 MSRR---VLPGFGLTLGLTLLYLSLIVLLPLAALVLKAAGLGWAEFWAVLTSPRVLAALKLSLGTALIAALINLVFGLPL 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  81 AWVLVRYTFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAADLGFKIAYSPLGITLALTFVTLPFVVRTVQP 160
Cdd:COG0555   78 AWVLVRYRFPGKRLVDALVDLPFALPTAVAGIALLLLFGPNGWLGQLLAPLGIKVAFTPLGIVLAQTFVSLPFVVRTVQP 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771 161 VLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYD 240
Cdd:COG0555  158 VLEELDPELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARALGEFGAVIFIAGNLPMKTEILPLLIYLKLEEGD 237


                 ....*...
gi 516459771 241 YHGATSIG 248
Cdd:COG0555  238 YAGATAIA 245
PRK10971 PRK10971
sulfate/thiosulfate ABC transporter permease CysT;
8-247 1.35e-87

sulfate/thiosulfate ABC transporter permease CysT;


Pssm-ID: 182873  Cd Length: 277  Bit Score: 262.00  E-value: 1.35e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   8 VIPGFGLTLGYTVVYLSLIVLIPLAAMFVHAAQLTWDQFWNIITAPRVLAALKLSFSTALYAALINGLIGTLLAWVLVRY 87
Cdd:PRK10971   9 VLPGFTLSLGTSLLFVCLILLLPLSALVMQLSQMSWAQYWEVITNPQVVAAYKVTLLSAFVASIFNAVFGLLMAWILTRY 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  88 TFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAADLGFKIAYSPLGITLALTFVTLPFVVRTVQPVLADIPR 167
Cdd:PRK10971  89 RFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGWYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGP 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771 168 EIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYDYHGATSI 247
Cdd:PRK10971 169 EYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFVRLQEFDYPAASAI 248
cysT CHL00187
sulfate transport protein; Provisional
 11-239 2.06e-86

sulfate transport protein; Provisional


Pssm-ID: 214388 [Multi-domain]  Cd Length: 237  Bit Score: 257.64  E-value: 2.06e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  11 GFGLTLGYTVVYLSLIVLIPLAAMFVHAAQLTWDQFWNIITAPRVLAALKLSFSTALYAALINGLIGTLLAWVLVRYTFP 90
Cdd:CHL00187   9 KFSSIYIISLSYIIFLLVLPILALLIKASQQPWSDFLQKATEPIALSAYSLTLSMALIAALINGFFGLLIAWVLVRYNFP 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  91 GRKIIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAADLGFKIAYSPLGITLALTFVTLPFVVRTVQPVLADIPREIE 170
Cdd:CHL00187  89 GKRLLDAAVDLPFALPTSVAGLTLATVYGDNGWIGHLLSHLGIQIVFTKLGVLLAMIFVSFPFVVRTIQPVLQEIEKELE 168

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 516459771 171 EAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQY 239
Cdd:CHL00187 169 EAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAIGEYGSIVIISSNIPFKDLVASVLIFQSLEQY 237
3a0106s02 TIGR00969
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and ...
 8-248 1.31e-83

sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulfate ABC transporter. [Transport and binding proteins, Anions]


Pssm-ID: 273370  Cd Length: 271  Bit Score: 251.50  E-value: 1.31e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771    8 VIPGFGLTLGYTVVYLSLIVLIPLAAMFVHAAQLTWDQFWNIITAPRVLAALKLSFSTALYAALINGLIGTLLAWVLVRY 87
Cdd:TIGR00969  11 FIKWGKLSLGIALLYVFLILILPVAALFVQAFSKGLGQFWQNATDPIAVSAYNLTLLMALIAVPLNGVFGLLIAWVLTRY 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   88 TFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAADLGFKIAYSPLGITLALTFVTLPFVVRTVQPVLADIPR 167
Cdd:TIGR00969  91 QFPGRKLLDALIDLPFALSPVVAGLTLALLYGSNGWLGSWLASFGIQIIFTWPGMALAMIFVSLPFVVREVQPVLEELGT 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  168 EIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYDYHGATSI 247
Cdd:TIGR00969 171 EAEEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFGAVVVVSGNIPGKTLTLPLLIEERLEQYDYPGAYVI 250


                  .
gi 516459771  248 G 248
Cdd:TIGR00969 251 A 251
CysW COG4208
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 16-244 5.53e-55

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 443356  Cd Length: 281  Bit Score: 178.77  E-value: 5.53e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  16 LGYTVVYLSLIVLIPLAAMFVHAAQLTWDQFWNIITAPRVLAALKLSFSTALYAALINGLIGTLLAWVLVRYTFPGRKII 95
Cdd:COG4208   22 IGLALLFLALFLVLPLAAVFAEAFSKGWGAYLAALTDPDALSAIRLTLLVAAIAVPLNLVFGVAAAWAITRFEFRGKRLL 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  96 DAMIDLPFALPTAVAGIALTALYTPTGLVGQFAADLGFKIAYSPLGITLALTFVTLPFVVRTVQPVLADIPREIEEAAAC 175
Cdd:COG4208  102 ITLIDLPFSVSPVVAGLIYVLLFGAQGWFGPWLEAHDIKIIFAVPGIVLATIFVTFPFVARELIPLMQEQGTDEEEAALT 181

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 516459771 176 LGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYDYHGA 244
Cdd:COG4208  182 LGASGWQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGETNTLPLHVEILYNEYNFVAA 250
ModB COG4149
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ...
 51-232 3.60e-51

ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis


Pssm-ID: 443320 [Multi-domain]  Cd Length: 223  Bit Score: 167.15  E-value: 3.60e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  51 TAPRVLAALKLSFSTALYAALINGLIGTLLAWVLVRYTFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAAD 130
Cdd:COG4149    1 LSPEDWSALWLSLKVALIATLLLLLLGIPLAWWLARTRFRGKGLLEALVTLPLVLPPTVLGFYLLLLFGRNGPLGQLLEE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771 131 L-GFKIAYSPLGITLALTFVTLPFVVRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVG 209
Cdd:COG4149   81 LfGISLVFTWTGAVLASVVVSLPLMVQPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARALG 160

                        170       180
                 ....*....|....*....|...
gi 516459771 210 EYGSVIFIAGNMPMKTEILPLLI 232
Cdd:COG4149  161 EFGATLMFAGNIPGKTQTLPLAI 183
permease_CysW TIGR02140
sulfate ABC transporter, permease protein CysW; This model represents CysW, one of two ...
 13-244 1.28e-47

sulfate ABC transporter, permease protein CysW; This model represents CysW, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysT (TIGR02139). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]


Pssm-ID: 162725  Cd Length: 261  Bit Score: 159.09  E-value: 1.28e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   13 GLTLGYTVVYLslivLIPLAAMFVHAAQLTWDQFWNIITAPRVLAALKLSFSTALYAALINGLIGTLLAWVLVRYTFPGR 92
Cdd:TIGR02140   7 SLALGLLFLLL----LLPLALIFQEAFEKGFGVFFAAISDPDALSAIKLTLLVALIVVPLNTVFGVCAAWVLTRFQFPGK 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   93 KIIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAADLGFKIAYSPLGITLALTFVTLPFVVRTVQPVLADIPREIEEA 172
Cdd:TIGR02140  83 RLLLTIIDLPFSVSPVVAGLIFVLLYGSQGWLGPWLEDLDIKIIFSLPGIVLATMFVTCPFVARELIPVMEEQGTEQEEA 162

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 516459771  173 AACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYDYHGA 244
Cdd:TIGR02140 163 ALTLGASWWQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGKTNTLPLHVELLYNEYQSYAA 234
Mo_ABC_porter TIGR01581
NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively ...
 38-232 4.49e-45

NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively weak homology compared to its neighbor clades, the molybdate (TIGR02141) and sulfate (TIGR00969) porters. Neighbor-Joining, PAM-distance phylogenetic trees support the separation of the clades in this way. Included in this group is a gene designated NifC in Clostridium pasturianum. It would be reasonable to presume that NifC acts as a molybdate porter since the most common form of nitrogenase is a molybdoenzyme. Several other sequences falling within the scope of this model are annotated as molybdate porters and one, from Halobacterium, is annotated as a sulfate porter. There is presently no experimental evidence to support annotations with this degree of specificity.


Pssm-ID: 130643  Cd Length: 225  Bit Score: 151.40  E-value: 4.49e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   38 AAQLTWDQFWNIITAPRVLAALKLSFSTALYAALINGLIGTLLAWVLVRYTFPGRKIIDAMIDLPFALPTAVAGIALTAL 117
Cdd:TIGR01581   2 IRRLGGSHILSALTDPENIKALRLSLATSLASLLLAVIIGIPTAYVLARVRFPLKKLLDTLLDLPMVLPPLVAGLALLLL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  118 YTPTGLVGQFAADLGFKIAYSPLGITLALTFVTLPFVVRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWL 197
Cdd:TIGR01581  82 FGRNGLLGPYLEAAGIQVIFSTLGVVLAQTFVASPYYVRVARSTFKSVDPRYEDVARSLGAGPLETFRKITLPMARPGLL 161

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 516459771  198 TGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLI 232
Cdd:TIGR01581 162 AGLVLAWARALGEFGATLMFAGSIQGKTRTLPLAI 196
modB_ABC TIGR02141
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, ...
 61-232 2.24e-39

molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions]


Pssm-ID: 273993 [Multi-domain]  Cd Length: 208  Bit Score: 136.22  E-value: 2.24e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   61 LSFSTALYAALINGLIGTLLAWVLVRYTFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAADLGFKIAYSPL 140
Cdd:TIGR02141   2 LSLKVAVIATLLLLPLGIPVAWLLARSRFRGKPLLEVLVTLPLVLPPTVLGFYLLIAFGPNGPIGKLLELFGISLVFTFT 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  141 GITLALTFVTLPFVVRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGN 220
Cdd:TIGR02141  82 GAVLASVIVSFPLMVQPIRAAFEAVDPDLEEAARTLGASESQTFLKVTLPLAFPGLLAGAVLSFARALGEFGATLMFAGN 161

                         170
                  ....*....|..
gi 516459771  221 MPMKTEILPLLI 232
Cdd:TIGR02141 162 IPGETQTIPLAI 173
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
20-223 2.63e-37

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 137.98  E-value: 2.63e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  20 VVYLSLIVLIPLAAMFVHAAQLTWDQFWNIITAPRVLAALKLSFSTALYAALINGLIGTLLAWVLVRYTFPGRKIIDAMI 99
Cdd:COG1178   17 ALLLALLVLLPLLALLLRAFTDGLANFWALLSDPYLWRALGNTLLLALLVTLLSLLLGVPLAWLLARTDFPGRRLLRWLL 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771 100 DLPFALPTAVAGIALTALYTPTGLVGQF-AADLGFKIA--YSPLGITLALTFVTLPFVVRTVQPVLADIPREIEEAAACL 176
Cdd:COG1178   97 LLPLALPPYVVALAWIALFGPNGLLNTLlRALFGLEPPdiYGLGGIILVLVLFNYPYVYLLLRAALRSIDASLEEAARSL 176

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 516459771 177 GAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPM 223
Cdd:COG1178  177 GASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPLVLGGGYTT 223
PotC COG1177
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ...
 2-232 4.48e-36

ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];


Pssm-ID: 440790 [Multi-domain]  Cd Length: 262  Bit Score: 129.08  E-value: 4.48e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   2 SRRISPVIPGFGLTLGYTVVYLSLIVLIPLA-----AMFVHAAQLTWDQFWNIITAPRVLAALKLSFSTALYAALINGLI 76
Cdd:COG1177    1 SSRLGRLLLRLFLALVLLFLYLPILVLVLYSfndswFLTFPPEGFTLRWYAELFSDPRLLDALLNSLLIALLSTLLATVL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  77 GTLLAWVLVRYTFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGLVGqfaadlgfkiaySPLGITLALTFVTLPFVVR 156
Cdd:COG1177   81 GTPAALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLSG------------GLWGLILAHVVFTLPFVVL 148

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 516459771 157 TVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNmpmKTEILPLLI 232
Cdd:COG1177  149 VVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAGP---GVTTLPVYI 221
modB PRK09421
molybdate ABC transporter permease subunit;
53-232 1.43e-33

molybdate ABC transporter permease subunit;


Pssm-ID: 181841  Cd Length: 229  Bit Score: 121.57  E-value: 1.43e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  53 PRVLAALKLSFSTALYAALINGLIGTLLAWVLVRYTFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAAD-L 131
Cdd:PRK09421   5 DPEWQAVLLSLKVSSVAVLFSLPFGILVAWLLARCRFPGKSLLDSLLHLPLVLPPVVTGYLLLISMGRRGFIGQWLYEwF 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771 132 GFKIAYSPLGITLALTFVTLPFVVRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEY 211
Cdd:PRK09421  85 GISFAFSWRGAALAAAVMAFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGEF 164

                        170       180
                 ....*....|....*....|.
gi 516459771 212 GSVIFIAGNMPMKTEILPLLI 232
Cdd:PRK09421 165 GATITFVSNIPGETQTIPSAM 185
cysW PRK11602
sulfate/thiosulfate ABC transporter permease CysW;
6-241 1.38e-32

sulfate/thiosulfate ABC transporter permease CysW;


Pssm-ID: 183225  Cd Length: 283  Bit Score: 120.63  E-value: 1.38e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   6 SPVIPGFGLTLGYTVVYLSLIVLIPLAAMFVHAAQLTWDQFWNIITAPRVLAALKLSFSTALYAALINGLIGTLLAWVLV 85
Cdd:PRK11602  13 PPINWGKWFLIGIGMLVSAFILVVPMIYIFVQAFSKGLMPVLQNLADPDMLHAIWLTVLIALIAVPVNLVFGILLAWLVT 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  86 RYTFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAADLGFKIAYSPLGITLALTFVTLPFVVRTVQPVLADI 165
Cdd:PRK11602  93 RFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQLMFSWPGMVLVTIFVTCPFVVRELVPVMLSQ 172

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 516459771 166 PREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLliMVKLDQYDY 241
Cdd:PRK11602 173 GSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPL--QIELLEQDY 246
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
2-244 4.59e-32

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 123.35  E-value: 4.59e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   2 SRRISPVIPGFG--LTLGYTVVYLSLIVLIPLAAMFVHA------AQLTWDQFWNIITAPRVLAALKLSFSTALYAALIN 73
Cdd:COG1178  275 ARRPRRVKLGRWrwLALALCLLLVLLGLLLPLLALLLWSltkaldDNLTLDNYRFVLLDPSLLRALLNSLLLALLAALLA 354

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  74 GLIGTLLAWVLVRYTFPGRKIIDAMIDLPFALPTAVAGIALTALytptglvgqFAADLGFKIAYSPLGITLALTFVTLPF 153
Cdd:COG1178  355 VLLALLLAYLVRRRRGRLARLLDRLAMLPYAVPGIVLGLGLLLL---------FNRPLPLLLYGTLAILVLAYVVRFLPF 425

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771 154 VVRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAgnmPMKTEILPLLIM 233
Cdd:COG1178  426 ALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKELSATLLLR---PPGFETLAVLIY 502

                        250
                 ....*....|.
gi 516459771 234 VKLDQYDYHGA 244
Cdd:COG1178  503 QLASSGRYGEA 513
PotB COG1176
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ...
 1-223 6.58e-27

ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];


Pssm-ID: 440789 [Multi-domain]  Cd Length: 287  Bit Score: 105.61  E-value: 6.58e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   1 MSRRISPVIPGFGLTLGYtVVYLSLIVLIPLAAMFVHA-----------AQLTWDQFWNIITAPRVLAALKLSFSTALYA 69
Cdd:COG1176    1 MSAALRRRLRPLLLLLPA-LLWLLLFFVLPLLLLLVYSfttrdpyggvvPGFTLENYARLFTDPLYLKVLLRTLWIALLT 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  70 ALINGLIGTLLAWVLVRYTFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAADLG-----FKIAYSPLGITL 144
Cdd:COG1176   80 TLICLLLGYPIAYFLARAPPRWRNLLLLLVILPFWTSFLVRTYAWIVLLGRNGLLNSLLLALGlidepLRLLYTEFAVVI 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 516459771 145 ALTFVTLPFVVRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPM 223
Cdd:COG1176  160 GLVYVYLPFMVLPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAFVTPALLGGGKVL 238
PRK15050 PRK15050
2-aminoethylphosphonate transport system permease PhnU; Provisional
 20-217 1.19e-20

2-aminoethylphosphonate transport system permease PhnU; Provisional


Pssm-ID: 237888 [Multi-domain]  Cd Length: 296  Bit Score: 88.91  E-value: 1.19e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  20 VVYLSLIVLIPLAAMFVHA----AQLTWDQFWNIITAPRVLAALKLSFSTALYAALINGLIGTLLAWVLVRYTFPGRKII 95
Cdd:PRK15050  32 LLVLAPLVVYPLVRVVLQSltgeHGLGLATYRAVLGSPDFRGALLTTLQIAFASTAGCLVLGVLLALVLAFVPFPGASLV 111

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  96 DAMIDLPFALPTAVAGIALTALYTPTGLVGQFAADLG------FKIAYSPLGITLALTFVTLPFVVRTVQPVLADIPREI 169
Cdd:PRK15050 112 GRFIDTFVAFPSFLITLAFTFLYGSAGSVNIALQRLFgleappLDFLYSPGGVILAEITFYTPFVVRPLLAAFAQLDARQ 191

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 516459771 170 EEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFI 217
Cdd:PRK15050 192 LEAAASLGASPWRVARRVILPEAWPALAAGGSLCLLLTLNEFGIVLFT 239
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 59-247 6.03e-19

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 81.94  E-value: 6.03e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  59 LKLSFSTALYAALINGLIGTLLAWVLVRYTFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGlvgqfaaDLGFKIAYS 138
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLL-------GWGILPGLG 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771 139 PLGITLALTFVtLPFVVRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIA 218
Cdd:cd06261   74 LPALILALLLI-APFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLG 152

                        170       180
                 ....*....|....*....|....*....
gi 516459771 219 GNMPMKTEILPLLIMVKLDQYDYHGATSI 247
Cdd:cd06261  153 GGEAPGPGTGLLLIFAILFPGDLGVAAAV 181
potC PRK09500
spermidine/putrescine ABC transporter membrane protein; Reviewed
 8-236 1.67e-17

spermidine/putrescine ABC transporter membrane protein; Reviewed


Pssm-ID: 236542 [Multi-domain]  Cd Length: 256  Bit Score: 79.64  E-value: 1.67e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   8 VIPGFGLTLGYTVVYLSLIVLIplaAMFVHAAQ-------LTWDQFWNIITAPRVLAALKLSFSTALYAALINGLIGTLL 80
Cdd:PRK09500   4 LLRGGFMTLVYAYLYIPIIILI---VNSFNSSRfginwkgFTTKWYELLFNNDSLLQAAQHSLTMAVFSATFATLIGSLT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  81 AWVLVRYTFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGLvgqfaaDLGFkiaysplgITLALTFVT--LPFVVRTV 158
Cdd:PRK09500  81 AVALYRYRFRGKKFVSGMLFVVMMSPDIVMAISLLVLFMLLGI------QLGF--------WSLLFAHITfcLPFVVVTV 146

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771 159 QPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGnmpMKTEILPLLI--MVKL 236
Cdd:PRK09500 147 YSRLKGFDVRMLEAAKDLGASEFTILRKIILPLALPAVAAGWLLSFTLSLDDVVVSSFVTG---PSYEILPLKIysMVKV 223
UgpE COG0395
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ...
 1-204 4.85e-17

ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440164 [Multi-domain]  Cd Length: 282  Bit Score: 78.60  E-value: 4.85e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   1 MSRRISPVIPGFGLTLGYTVVYL-SLIVLIPLAAMFVHA----------------AQLTWDQFWNIITAPRVLAALKLSF 63
Cdd:COG0395    1 MSATARRRRRRLGRILLYLLLILlALLFLFPLYWMVVTSfkppaeifsgppsllpSEFTLENYRAAFTDGPFGRYLLNSL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  64 STALYAALINGLIGTLLAWVLVRYTFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGLVGqfaadlgfkiaySPLGIT 143
Cdd:COG0395   81 IVAVVSTVLSLLLSSLAAYALARFRFRGRKLLFLLILATLMIPGQVLLIPLYLLFRQLGLLN------------TYWGLI 148

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 516459771 144 LALTFVTLPFVVRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAF 204
Cdd:COG0395  149 LPYLAFGLPFGIFLLRQFFRSIPRELEEAARIDGASEFRIFWRIVLPLSKPALATVAIFTF 209
thiP PRK09433
thiamine transporter membrane protein; Reviewed
 23-205 4.18e-15

thiamine transporter membrane protein; Reviewed


Pssm-ID: 181853 [Multi-domain]  Cd Length: 525  Bit Score: 74.49  E-value: 4.18e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  23 LSLIVLIPLAAMFVHAAQLTWDQFWNiitAPRVLAALKLSFSTALYAALINGLIGTLLAWVLVRYTFPGRKIIDAMIDLP 102
Cdd:PRK09433  13 LVALALLALLALWLHAPGGDWDAVWQ---DSYLWHVLRFSFWQAFLSALLSVLPAIPLARALYRRRFPGRGLLLRLCAMT 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771 103 FALPTAVAGIALTALYTPTGLVGQFAADLGFKIAYSPL---GITLALTFVTLPFVVRTVQPVLADIPREIEEAAACLGAK 179
Cdd:PRK09433  90 LVLPVLVAVFGLLSVYGRSGWLAQLLQALGLEWPFSIYglqGILLAHVFFNLPLATRLLLQALESIPAEQRQLAAQLGMR 169

                        170       180       190
                 ....*....|....*....|....*....|
gi 516459771 180 PLQVFRYILVPAL----LPAWLTGFALAFA 205
Cdd:PRK09433 170 GWQFFRLVEWPYLrrqlPPVAALIFMLCFT 199
COG4132 COG4132
ABC-type uncharacterized transport system, permease component [General function prediction ...
 20-232 1.26e-14

ABC-type uncharacterized transport system, permease component [General function prediction only];


Pssm-ID: 443307 [Multi-domain]  Cd Length: 286  Bit Score: 72.15  E-value: 1.26e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  20 VVYLSLIVLIPLAAMFVHA-----AQLTWDQFWNIiTAPRVLAALKLSFSTALYAALINGLIGTLLAWVLVRytFPGRKI 94
Cdd:COG4132   22 FLFVLLFLLLPTVWVVIGAfqdddGGFTLANYAEL-TSPFYLQAFWNSIWLSLASALIGAVIGLLLAYALRR--GGPGWL 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  95 IDAMidLPFALPTA-VAGI----ALTALYTPTGLVGQFAADLGFKIA-----YSPLGITLALTFVTLPFVVRTVQPVLAD 164
Cdd:COG4132   99 RRAV--LAFSGVASnFAGVplafAFIATLGRNGLVTLLLKQLGIDLYdgfnlYSFWGLILVYLYFQIPLMVLLLYPALDG 176

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 516459771 165 IPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVI-FIAGNMPmkteILPLLI 232
Cdd:COG4132  177 LRREWREAAALLGASRWQYWRRVALPVLAPSLLGTFLLLFANAFGAYATAYaLTGGNYN----LVPIRI 241
UgpA COG1175
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
19-195 1.54e-13

ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440788 [Multi-domain]  Cd Length: 298  Bit Score: 69.01  E-value: 1.54e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  19 TVVYLSLIVLIPLAAMFVHA--------AQLTW---DQFWNIITAPRVLAALKLSFSTALYAALINGLIGTLLAWVLVRy 87
Cdd:COG1175   27 ALLLLLVFVLYPLLYTLYLSftdwnllgPPPEFvglDNYARLFTDPRFWNALGNTLLFTVVSVPLQLVLGLLLALLLNR- 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  88 TFPGRKIIDAMIDLPFALPTAVAGIALTALYTPT-GLVGQFAADLGFK-------IAYSPLGITLALTFVTLPFVVRTVQ 159
Cdd:COG1175  106 KLRGRGFFRTLFFLPWVISPVVVALIWKWLFNPDyGLLNALLGALGLEpinwlgdPSLALPAVIIVTVWKGTGFNMLIFL 185

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 516459771 160 PVLADIPREIEEAAACLGAKPLQVFRYILVPALLPA 195
Cdd:COG1175  186 AGLQSIPRELYEAARIDGASPWQRFRRITLPLLRPT 221
PstA COG0581
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 26-222 6.36e-13

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440346 [Multi-domain]  Cd Length: 259  Bit Score: 66.60  E-value: 6.36e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  26 IVLIPLAAMFVH-----AAQLTWDqFWNIITAPR-----VLAALKLSFSTALYAALINGLIGTLLAWVLVRYTFPGR--K 93
Cdd:COG0581    1 LALLPLVWILGTvlvkgLPALSWE-FLTSSPSPGpegggILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARGGRlaR 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  94 IIDAMIDLPFALPTAVAGI-ALTALYTPTGLvgqfaadlgfkiAYSPLGITLALTFVTLPFVVRTVQPVLADIPREIEEA 172
Cdd:COG0581   80 LIRFAIDVLAGVPSIVYGLfGYALFVLTLGL------------GFSLLAGALALALLMLPVVIRTTEEALRLVPNSLREA 147

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 516459771 173 AACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMP 222
Cdd:COG0581  148 SYALGATKWQTIRKVVLPAALPGILTGVILAIARAAGETAPLLFTAGVSP 197
thiP TIGR01253
thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, ...
 20-219 7.45e-13

thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, permease protein in bacteria. The protein belongs to the larger ABC transport system. It consists of atleast three components: the inner mebrane permease; thiamine binding protein; an ATP-binding subunit. It has been experimentally demonstrated that the mutants in the various steps in the de novo synthesis of the thiamine and the biologically active form, namely thiamine pyrophosphate can be exogenously supplemented with thiamine, thiamine monophosphate (TMP) or thiamine pyrophosphate (TPP). [Transport and binding proteins, Other]


Pssm-ID: 130320 [Multi-domain]  Cd Length: 519  Bit Score: 68.02  E-value: 7.45e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   20 VVYLSLIVLIPLAA---MFVHAAQLTWDQFWniiTAPRVLAALKLSFSTALYAALINGLIGTLLAWVLVRYTFPGRKIID 96
Cdd:TIGR01253  10 VSAISFIIAFAGAAflaIFALAGEDDWRAVF---QDDYLQHLILFSFGQAFLSALLSIFFAIFLARALFRKPFLGKKALL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   97 AMIDLPFALPTAVAGIALTALYTPTGLVGQFAADLGFKIAYSPL---GITLALTFVTLPFVVRTVQPVLADIPREIEEAA 173
Cdd:TIGR01253  87 KLCALTFILPALVAIFGIIGIYGRQGWLATLANLFGLEWQFHIYglqGILIAHLFFNIPLAAQLFLQALENIPGEQRQLA 166

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 516459771  174 ACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAG 219
Cdd:TIGR01253 167 AQLGLQGWHFFKFVEWPVFRQQCLPTAALIFMLCFASFATVLSLGG 212
PRK10592 PRK10592
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
 55-232 4.01e-12

putrescine transporter subunit: membrane component of ABC superfamily; Provisional


Pssm-ID: 182574  Cd Length: 281  Bit Score: 64.87  E-value: 4.01e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  55 VLAALKLSFSTALYAALINGLIGTLLAWVLVRY-TFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAADLGF 133
Cdd:PRK10592  61 MMSAVGLSLTIAACAATAAAILGTIAAVVMVRFgRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALAHAIGWPADRGM 140

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771 134 kiayspLGITLA-LTFVTlPFVVRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYG 212
Cdd:PRK10592 141 ------LTIWLAhVTFCT-AYVAVVISSRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLV 213

                        170       180
                 ....*....|....*....|
gi 516459771 213 SVIFIAGnmPMKTeILPLLI 232
Cdd:PRK10592 214 IASFVSG--PGAT-TLPMLV 230
3a0107s02c TIGR00974
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ...
 12-220 5.10e-12

phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273373  Cd Length: 271  Bit Score: 64.56  E-value: 5.10e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   12 FGLTLGYTVVYLSLIVLIPLAAMFVHaaqLTWDQFWNIITAP----RVLAALKLSFSTALYAALINGLIGTLLAWVLVRY 87
Cdd:TIGR00974   8 SLLSALLALLPLIWILWYILIKGLPA---LNLEFFTKSPTPTgaegGIGPAIVGTLLLTLLAIVIAVPLGIGAAIYLAEY 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   88 TFPGR--KIIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAAdlgfkiayspLGITLALTFVTLPFVVRTVQPVLADI 165
Cdd:TIGR00974  85 ANGSRftKIIRFAVDILAGVPSIVVGLFGYGFFVLTYLGGGFSL----------LAGALALALLILPVIIRTTEEALKAV 154

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 516459771  166 PREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGN 220
Cdd:TIGR00974 155 PKDLREASLALGATKWQTIFKVVLPAALPGILTGIILSIARAAGETAPLLFTAGG 209
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 59-248 3.85e-11

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 60.64  E-value: 3.85e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  59 LKLSFSTALYAALINGLIGTLLAWvlvrYTFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGLVGqfaadlGFKIAYS 138
Cdd:NF038017   2 LRVSGTATLIAALIGIPLGALLAL----RRFPGRRLVISLLNTLMGLPPVVVGLIVYLLLSRSGPLG------FLGLLYT 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771 139 PLGITLALTFVTLPFVVRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAwLTGFALAFARGVGEYGSVIFIA 218
Cdd:NF038017  72 PTAMIIAQAVLALPIVAGLTLAAVQGLDPELRLQILSLGATRWQALWTLLKEARFAL-LAAVLAGFGRAISEVGAVMMVG 150

                        170       180       190
                 ....*....|....*....|....*....|
gi 516459771 219 GNMPMKTEILPLLIMVKLDQYDYHGATSIG 248
Cdd:NF038017 151 GNIRGYTRVLTTAIVLETSKGNFDLALALG 180
PhnU2 TIGR03262
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ...
 20-223 2.70e-10

putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 274495 [Multi-domain]  Cd Length: 546  Bit Score: 60.46  E-value: 2.70e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   20 VVYLSLIVLIPLAAMFVHAAQ------LTWDQFWNIITAPRVLAALKLSFSTALYAALINGLIGTLLAWVLVRYTFPGRK 93
Cdd:TIGR03262  11 ILALLLFLLLPLLALLTKSVYdsdgdfIGLANFAEYFATPGLLQSLGNSLTVSAIVTAIVVPLAFAFAYALTRSRIPGKG 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   94 IIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAadLGFKIaYSPLGITLALTFVTLPFVVRTVQPVLADIPREIEEAA 173
Cdd:TIGR03262  91 AFRLVALLPLLAPSLLPAISLIYLFGNQGLLKGLL--GGFSI-YGFWGIVIGEVFYTFPHALMILVTALSLADGRLYEAA 167

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 516459771  174 ACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPM 223
Cdd:TIGR03262 168 RAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDFGVPKVIGGDYNV 217
phosphate_pstC TIGR02138
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ...
 55-220 1.71e-08

phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273992 [Multi-domain]  Cd Length: 295  Bit Score: 54.20  E-value: 1.71e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   55 VLAALKLSFSTALYAALINGLIGTLLAWVLVRYTFP-GRKIIDAMIDLPFALPTAVAG-IALTAL------YTPTGLVGQ 126
Cdd:TIGR02138  61 ALPLIVGTLITSLIALLIAVPVGIGIAIFLSEIAPKrVRSVLKPVVELLAGIPSVVYGfWGLFVLvpflkpHFQPFLGSN 140

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  127 FAADLGFKIAYSPLGITLALtfVTLPFVVRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFAR 206
Cdd:TIGR02138 141 LGLIPLFGGPILTAGIVLAI--MILPTIASISRDALRAVPRSYKEASYALGATKWETIRRVILPAARSGIVGAVVLGLGR 218

                         170
                  ....*....|....
gi 516459771  207 GVGEYGSVIFIAGN 220
Cdd:TIGR02138 219 ALGETMAVTMVIGN 232
PstC COG0573
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 62-223 3.21e-08

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440338 [Multi-domain]  Cd Length: 303  Bit Score: 53.56  E-value: 3.21e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  62 SFSTALYAALINGLIGTLLAWVLVRY-TFPGRKIIDAMIDLPFALPTAVAGiaLTALYTPTGLVGQFAADLGFkiAYSPL 140
Cdd:COG0573   82 TLLVSLIALLIAVPLGLGIAIFLSEYaPPRLRRILKPAIELLAGIPSVVYG--FWGLFVLVPLLRDLFPWPPS--GFSLL 157

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771 141 GITLALTFVTLPFVVRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGN 220
Cdd:COG0573  158 TAGIVLAIMILPTITSLSRDALRAVPRSLREAALALGATRWETIRKVVLPAARSGIIAAVILGLGRALGETMAVLMVAGN 237


                 ...
gi 516459771 221 MPM 223
Cdd:COG0573  238 APQ 240
MalG COG3833
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ...
 1-211 1.53e-07

ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];


Pssm-ID: 443045 [Multi-domain]  Cd Length: 282  Bit Score: 51.31  E-value: 1.53e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   1 MSRRISPVIPGF-GLTLGYTV-VYLSLIVLIPLAAMFVHA--------------AQLTWDQFWNIITAPRVLAALKLSFS 64
Cdd:COG3833    1 MSRRKSRKRRRRlKLGLRHLVlIILAIIALFPILWVVSASfnpggslyssslipENFTLENYKKLFTETPFLRWFLNSLI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  65 TALYAALINGLIGTLLAWVLVRYTFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGLVGqfaadlgfkiaySPLGITL 144
Cdd:COG3833   81 VAVVTAIISVFLAALAAYAFSRFRFKGRKAGLLALLLLQMFPAFLALVALYLLLSALGLLN------------TLLGLIL 148

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 516459771 145 ALTFVTLPFVVRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEY 211
Cdd:COG3833  149 VYLGGAIPFNTWLMKGYFDTIPKELDEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDF 215
thiP PRK09433
thiamine transporter membrane protein; Reviewed
 25-232 1.26e-06

thiamine transporter membrane protein; Reviewed


Pssm-ID: 181853 [Multi-domain]  Cd Length: 525  Bit Score: 49.06  E-value: 1.26e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  25 LIVLIPLAAMFVHAAQLtwdQFWNIITAPRVLAALKLSFSTALYAALINGLIGTLLAW-----VLVRYTFPGRkIIDAMI 99
Cdd:PRK09433 290 LLLLPPLLAVVVSGLNA---SLLRVLAQPALWQALWTSLRIALAAALLAVVLTMMLLWssrelRLRQRKLAAQ-ALELSG 365

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771 100 DLPFALPTAVAGIALTALYTPTGLVgqfaadlgFKIAYSPLGITLALTfvTLPFVVRTVQPVLADIPREIEEAAACLGAK 179
Cdd:PRK09433 366 MLILAMPGIVLATGLFLLLRNTTDL--------PASALGIVILTNALM--ALPYALRVLEPPMRDIAARYGRLCQSLGIR 435

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 516459771 180 PLQVFRYILVPALLPAWLTGFALAFARGVGEYGsVIFIAGNMPMKTeiLPLLI 232
Cdd:PRK09433 436 GWSRLRLIELRALRRPLAQAFAFACALSLGDFG-VIALFGSQDFRT--LPFLL 485
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 77-223 2.94e-06

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 46.52  E-value: 2.94e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   77 GTLLAWVL-VRYTFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTglvgqfaadlgfKIAYSPLGITLALTFVTLPFVV 155
Cdd:pfam00528   1 GIPLGIIAaLRRGRRLDRLLRPLIDLLQALPSFVLAILLVVIAILS------------ILGHGILPAIILALLGWAGYAR 68

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 516459771  156 RTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPM 223
Cdd:pfam00528  69 LIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGL 136
malG PRK10998
maltose ABC transporter permease MalG;
55-211 3.00e-06

maltose ABC transporter permease MalG;


Pssm-ID: 182891  Cd Length: 296  Bit Score: 47.40  E-value: 3.00e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  55 VLAALKLSFSTALYAALINGLIGTLLAWVLVRYTFPGRK-IIDAMidLPFALPTAVagIALTALYTPTGLVGQFAADLGf 133
Cdd:PRK10998  81 VLLWLWNSVKVAGITAIGIVALSTTCAYAFARMRFKGKAtLLKGM--LIFQMFPAV--LSLVALYALFDRLGQYIPFIG- 155

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771 134 kiayspLGITLALTFVTLPFV---VRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGE 210
Cdd:PRK10998 156 ------LNTHGGVIFAYLGGIalhVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITE 229


                 .
gi 516459771 211 Y 211
Cdd:PRK10998 230 V 230
TauC COG0600
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ...
 2-205 6.40e-06

ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440365 [Multi-domain]  Cd Length: 254  Bit Score: 46.29  E-value: 6.40e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   2 SRRISPVIPGFGLTLGYTVVYLSLIVLIPLAAMFVHAAQLTWDQFWNIITAPRVLAALKLSFSTALYAALINGLIGTLLA 81
Cdd:COG0600    6 RRRLRRLLLPLLSLALLLALWELAARLGLVPPFLLPSPSAVLAALVELLASGELWEHLLASLLRVLLGFALAALLGVPLG 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  82 WVLVRYTFpGRKIIDAMIDLPFALPtAVAGIALTALYTPTGLvgqfaadlgfkiayspLGITLALTFVTLPFVVRTVQPV 161
Cdd:COG0600   86 LLLGLSRL-LRRLLDPLLVFLRPIP-PLALAPLLILWFGIGE----------------ASKIFVIFLGAFFPILLNTAAG 147

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 516459771 162 LADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFA 205
Cdd:COG0600  148 VRSVDPELLELARSLGASRWQILRKVVLPAALPYIFTGLRIALG 191
PRK10561 PRK10561
sn-glycerol-3-phosphate ABC transporter permease UgpA;
63-194 1.99e-04

sn-glycerol-3-phosphate ABC transporter permease UgpA;


Pssm-ID: 182550 [Multi-domain]  Cd Length: 280  Bit Score: 42.12  E-value: 1.99e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  63 FSTALYAALI--NGLIGTLLAWVLVRYTFPGRKIIDAMIDLPFALPTAVAGIALTALYTP-TGLVGQFAADLGFKIAYSP 139
Cdd:PRK10561  58 WTTIKFSTLVtvSGLLVSLFFAALVDYVVRGSRFYQTLMLLPYAVAPAVAAVLWIFLFNPgRGLITHFLAEFGYDWNHAQ 137

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 516459771 140 ------LGITLALTFVTLPFVVRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLP 194
Cdd:PRK10561 138 nsgqamFLVVFASVWKQISYNFLFFFAALQSIPRSLVEAAAIDGAGPIRRFFKLALPLIAP 198
MetP COG2011
ABC-type methionine transport system, permease component [Amino acid transport and metabolism]; ...
 139-204 2.20e-04

ABC-type methionine transport system, permease component [Amino acid transport and metabolism];


Pssm-ID: 441614  Cd Length: 220  Bit Score: 41.58  E-value: 2.20e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 516459771 139 PLGITLALTFVTLPFVVRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAF 204
Cdd:COG2011   92 TTAAIVPLTIAAIPFFARLVENALREVDPGVIEAAQAMGASPWQIIFKVLLPEALPSLILGLTVTL 157
PRK10782 PRK10782
D-methionine ABC transporter permease MetI;
146-195 5.21e-04

D-methionine ABC transporter permease MetI;


Pssm-ID: 182726  Cd Length: 217  Bit Score: 40.49  E-value: 5.21e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 516459771 146 LTFVTLPFVVRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPA 195
Cdd:PRK10782  96 LTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPG 145
PRK10683 PRK10683
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
 62-211 6.30e-04

putrescine transporter subunit: membrane component of ABC superfamily; Provisional


Pssm-ID: 182646  Cd Length: 317  Bit Score: 40.46  E-value: 6.30e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  62 SFSTALYAALINGLIGTLLAWVLVRYTFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAADLGF-----KIA 136
Cdd:PRK10683 102 SLQVAAISTLCCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKNNGVLNNFLLWLGVidqplTIL 181

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 516459771 137 YSPLGITLALTFVTLPFVVRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEY 211
Cdd:PRK10683 182 HTNLAVYIGIVYAYLPFMVLPIYTALTRIDYSLVEAALDLGARPLKTFFSVIVPLTKGGIIAGSMLVFIPAVGEF 256
potB PRK09497
spermidine/putrescine ABC transporter membrane protein; Reviewed
 62-209 9.92e-04

spermidine/putrescine ABC transporter membrane protein; Reviewed


Pssm-ID: 181910  Cd Length: 285  Bit Score: 39.67  E-value: 9.92e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  62 SFSTALYAALINGLIGTLLAWVLVRYTFPGRKIIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAADLG-----FKIA 136
Cdd:PRK09497  68 SLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGvidtpIRIM 147

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 516459771 137 YSPLGITLALTFVTLPFVVRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVG 209
Cdd:PRK09497 148 FTESAVIIGLVYILLPFMVLPLYSSIEKLDKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLLVLLPAMG 220
pstA PRK11268
phosphate ABC transporter permease PstA;
144-218 1.05e-03

phosphate ABC transporter permease PstA;


Pssm-ID: 183065 [Multi-domain]  Cd Length: 295  Bit Score: 39.67  E-value: 1.05e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 516459771 144 LALTFVTLPFVVRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVGEYGSVIFIA 218
Cdd:PRK11268 158 IALALLQIPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGVLLAIARIAGETAPLLFTA 232
PhnU2 TIGR03262
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ...
 56-219 6.06e-03

putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 274495 [Multi-domain]  Cd Length: 546  Bit Score: 37.74  E-value: 6.06e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771   56 LAALKLSFSTALYAALINGLIGTLLAWVLVRYtfPGRKIIDAMIDLPFALPTAVAGIALtalytptGLVGQF---AADLG 132
Cdd:TIGR03262 331 WEAYKNSLRLAATTALIGTILVFGGAYLIEKT--RGFGLLRGVLRFLAILPMAVPGLVL-------GLGYIFffnAPTNP 401

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516459771  133 FKIAYSPLGITLALT---FVTLPFVvrTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWLTGFALAFARGVG 209
Cdd:TIGR03262 402 LNGLYGTMALLVLCTvvhFYTVSHL--TAVTALKQIDSEFEAVSASLKVPFYKTFLRVTLPVCLPAILDIARYLFVNSMT 479

                         170
                  ....*....|
gi 516459771  210 EYGSVIFIAG 219
Cdd:TIGR03262 480 TVSAVVFLYS 489
PhnE COG3639
ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport ...
 139-197 9.36e-03

ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 442856 [Multi-domain]  Cd Length: 244  Bit Score: 36.60  E-value: 9.36e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 516459771 139 PLGITLALTFVTLPFVVRTVQPVLADIPREIEEAAACLGAKPLQVFRYILVPALLPAWL 197
Cdd:COG3639  119 PFAGVLALAIHTIGFLGKLFAEAIEEIDPGPVEALRATGASRLQVIRYGVLPQVLPQFL 177
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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