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Conserved domains on  [gi|516619347|ref|WP_017994134|]
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GNAT family N-acetyltransferase [Rhizobium leguminosarum]

Protein Classification

GNAT family N-acetyltransferase( domain architecture ID 10003213)

GNAT family N-acetyltransferase catalyzes the transfer of an acetyl group from acetyl-CoA to a substrate

CATH:  3.40.630.30
EC:  2.3.-.-
Gene Ontology:  GO:0016746|GO:0008080
PubMed:  27367672|26818562|15581578|10940244
SCOP:  3000403

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ArgA COG1246
N-acetylglutamate synthase or related acetyltransferase, GNAT family [Amino acid transport and ...
 36-151 6.08e-27

N-acetylglutamate synthase or related acetyltransferase, GNAT family [Amino acid transport and metabolism]; N-acetylglutamate synthase or related acetyltransferase, GNAT family is part of the Pathway/BioSystem: Arginine biosynthesis


:

Pssm-ID: 440859 [Multi-domain]  Cd Length: 132  Bit Score: 97.76  E-value: 6.08e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516619347  36 HLVDLSVLEKPSVSFLVARNGDAIVGCCALVEAGDGTAEIKRMFVDPEARGLRIASGLMNALEAIAGEKELTAIRLETci 115
Cdd:COG1246   16 ELIRPYALEEEIGEFWVAEEDGEIVGCAALHPLDEDLAELRSLAVHPDYRGRGIGRRLLEALLAEARELGLKRLFLLT-- 93

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 516619347 116 yQPEAIALYRKYGYREIEPfgSYLPDPL-----SLFMEKRL 151
Cdd:COG1246   94 -TSAAIHFYEKLGFEEIDK--EDLPYAKvwqrdSVVMEKDL 131
 
Name Accession Description Interval E-value
ArgA COG1246
N-acetylglutamate synthase or related acetyltransferase, GNAT family [Amino acid transport and ...
 36-151 6.08e-27

N-acetylglutamate synthase or related acetyltransferase, GNAT family [Amino acid transport and metabolism]; N-acetylglutamate synthase or related acetyltransferase, GNAT family is part of the Pathway/BioSystem: Arginine biosynthesis


Pssm-ID: 440859 [Multi-domain]  Cd Length: 132  Bit Score: 97.76  E-value: 6.08e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516619347  36 HLVDLSVLEKPSVSFLVARNGDAIVGCCALVEAGDGTAEIKRMFVDPEARGLRIASGLMNALEAIAGEKELTAIRLETci 115
Cdd:COG1246   16 ELIRPYALEEEIGEFWVAEEDGEIVGCAALHPLDEDLAELRSLAVHPDYRGRGIGRRLLEALLAEARELGLKRLFLLT-- 93

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 516619347 116 yQPEAIALYRKYGYREIEPfgSYLPDPL-----SLFMEKRL 151
Cdd:COG1246   94 -TSAAIHFYEKLGFEEIDK--EDLPYAKvwqrdSVVMEKDL 131
Acetyltransf_7 pfam13508
Acetyltransferase (GNAT) domain; This domain catalyzes N-acetyltransferase reactions.
 46-131 1.90e-18

Acetyltransferase (GNAT) domain; This domain catalyzes N-acetyltransferase reactions.


Pssm-ID: 463905 [Multi-domain]  Cd Length: 84  Bit Score: 74.80  E-value: 1.90e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516619347   46 PSVSFLVARNGDAIVGCCALVEAGDGTAEIK-RMFVDPEARGLRIASGLMNALEAIAGEKELTAIRLETciyQPEAIALY 124
Cdd:pfam13508   1 PGGRFFVAEDDGKIVGFAALLPLDDEGALAElRLAVHPEYRGQGIGRALLEAAEAAAKEGGIKLLELET---TNRAAAFY 77


                  ....*..
gi 516619347  125 RKYGYRE 131
Cdd:pfam13508  78 EKLGFEE 84
NAT_SF cd04301
N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer ...
 50-112 9.53e-12

N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransferase, Myristoyl-CoA: protein N-myristoyltransferase, and Acyl-homoserinelactone synthase which have a similar catalytic mechanism but differ in types of acyl groups transferred. Leucyl/phenylalanyl-tRNA-protein transferase and FemXAB nonribosomal peptidyltransferases which catalyze similar peptidyltransferase reactions are also included.


Pssm-ID: 173926 [Multi-domain]  Cd Length: 65  Bit Score: 56.90  E-value: 9.53e-12
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 516619347  50 FLVARNGDAIVGCCALV--EAGDGTAEIKRMFVDPEARGLRIASGLMNALEAIAGEKELTAIRLE 112
Cdd:cd04301    1 FLVAEDDGEIVGFASLSpdGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRLE 65
PRK07757 PRK07757
N-acetyltransferase;
49-140 2.42e-11

N-acetyltransferase;


Pssm-ID: 236088 [Multi-domain]  Cd Length: 152  Bit Score: 57.90  E-value: 2.42e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516619347  49 SFLVARNGDAIVGCCALVEAGDGTAEIKRMFVDPEARGLRIASGLMNALEAIAgeKELTAIRLETCIYQPEaiaLYRKYG 128
Cdd:PRK07757  42 DFYVAEEEGEIVGCCALHILWEDLAEIRSLAVSEDYRGQGIGRMLVEACLEEA--RELGVKRVFALTYQPE---FFEKLG 116

                         90
                 ....*....|..
gi 516619347 129 YREIEPfgSYLP 140
Cdd:PRK07757 117 FREVDK--EALP 126
 
Name Accession Description Interval E-value
ArgA COG1246
N-acetylglutamate synthase or related acetyltransferase, GNAT family [Amino acid transport and ...
 36-151 6.08e-27

N-acetylglutamate synthase or related acetyltransferase, GNAT family [Amino acid transport and metabolism]; N-acetylglutamate synthase or related acetyltransferase, GNAT family is part of the Pathway/BioSystem: Arginine biosynthesis


Pssm-ID: 440859 [Multi-domain]  Cd Length: 132  Bit Score: 97.76  E-value: 6.08e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516619347  36 HLVDLSVLEKPSVSFLVARNGDAIVGCCALVEAGDGTAEIKRMFVDPEARGLRIASGLMNALEAIAGEKELTAIRLETci 115
Cdd:COG1246   16 ELIRPYALEEEIGEFWVAEEDGEIVGCAALHPLDEDLAELRSLAVHPDYRGRGIGRRLLEALLAEARELGLKRLFLLT-- 93

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 516619347 116 yQPEAIALYRKYGYREIEPfgSYLPDPL-----SLFMEKRL 151
Cdd:COG1246   94 -TSAAIHFYEKLGFEEIDK--EDLPYAKvwqrdSVVMEKDL 131
PhnO COG0454
N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2) [Transcription, ...
 50-151 2.04e-23

N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2) [Transcription, General function prediction only];


Pssm-ID: 440222 [Multi-domain]  Cd Length: 136  Bit Score: 88.96  E-value: 2.04e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516619347  50 FLVARNGDAIVGCCALVEAGDGTAEIKRMFVDPEARGLRIASGLMNALEAIAGEKELTAIRLETCIYQPEAIALYRKYGY 129
Cdd:COG0454   36 FIAVDDKGEPIGFAGLRRLDDKVLELKRLYVLPEYRGKGIGKALLEALLEWARERGCTALELDTLDGNPAAIRFYERLGF 115

                         90       100
                 ....*....|....*....|..
gi 516619347 130 REIEPFGSYLPDPlslfMEKRL 151
Cdd:COG0454  116 KEIERYVAYVGGE----FEKEL 133
RimI COG0456
Ribosomal protein S18 acetylase RimI and related acetyltransferases [Translation, ribosomal ...
 62-151 4.06e-19

Ribosomal protein S18 acetylase RimI and related acetyltransferases [Translation, ribosomal structure and biogenesis];


Pssm-ID: 440224 [Multi-domain]  Cd Length: 92  Bit Score: 76.62  E-value: 4.06e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516619347  62 CCALVEAGDGTAEIKRMFVDPEARGLRIASGLMNALEAIAGEKELTAIRLETCIYQPEAIALYRKYGYREIEPFGSYLPD 141
Cdd:COG0456    3 ALLGLVDGGDEAEIEDLAVDPEYRGRGIGRALLEAALERARERGARRLRLEVREDNEAAIALYEKLGFEEVGERPNYYGD 82

                         90
                 ....*....|
gi 516619347 142 PlSLFMEKRL 151
Cdd:COG0456   83 D-ALVMEKEL 91
Acetyltransf_7 pfam13508
Acetyltransferase (GNAT) domain; This domain catalyzes N-acetyltransferase reactions.
 46-131 1.90e-18

Acetyltransferase (GNAT) domain; This domain catalyzes N-acetyltransferase reactions.


Pssm-ID: 463905 [Multi-domain]  Cd Length: 84  Bit Score: 74.80  E-value: 1.90e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516619347   46 PSVSFLVARNGDAIVGCCALVEAGDGTAEIK-RMFVDPEARGLRIASGLMNALEAIAGEKELTAIRLETciyQPEAIALY 124
Cdd:pfam13508   1 PGGRFFVAEDDGKIVGFAALLPLDDEGALAElRLAVHPEYRGQGIGRALLEAAEAAAKEGGIKLLELET---TNRAAAFY 77


                  ....*..
gi 516619347  125 RKYGYRE 131
Cdd:pfam13508  78 EKLGFEE 84
ElaA COG2153
Predicted N-acyltransferase, GNAT family [General function prediction only];
51-135 7.25e-18

Predicted N-acyltransferase, GNAT family [General function prediction only];


Pssm-ID: 441756 [Multi-domain]  Cd Length: 134  Bit Score: 74.45  E-value: 7.25e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516619347  51 LVARNGDAIVGCCALVEAGDGTAEIKRMFVDPEARGLRIASGLMNALEAIAGEKELTAIRLETciyQPEAIALYRKYGYR 130
Cdd:COG2153   37 LLAYDDGELVATARLLPPGDGEAKIGRVAVLPEYRGQGLGRALMEAAIEEARERGARRIVLSA---QAHAVGFYEKLGFV 113


                 ....*.
gi 516619347 131 EI-EPF 135
Cdd:COG2153  114 PVgEEF 119
yhbS COG3153
Predicted N-acetyltransferase YhbS [General function prediction only];
50-151 2.79e-16

Predicted N-acetyltransferase YhbS [General function prediction only];


Pssm-ID: 442387 [Multi-domain]  Cd Length: 142  Bit Score: 70.50  E-value: 2.79e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516619347  50 FLVARNGDAIVGCCAL----VEAGDGTAEIKRMFVDPEARGLRIASGLMNALEAIAGEKELTAIRLETciyQPEAIALYR 125
Cdd:COG3153   41 SLVAEDDGEIVGHVALspvdIDGEGPALLLGPLAVDPEYRGQGIGRALMRAALEAARERGARAVVLLG---DPSLLPFYE 117

                         90       100
                 ....*....|....*....|....*.
gi 516619347 126 KYGYREIEPFGsYLPDPLSLFMEKRL 151
Cdd:COG3153  118 RFGFRPAGELG-LTLGPDEVFLAKEL 142
Acetyltransf_1 pfam00583
Acetyltransferase (GNAT) family; This family contains proteins with N-acetyltransferase ...
 17-129 1.54e-15

Acetyltransferase (GNAT) family; This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.


Pssm-ID: 395465 [Multi-domain]  Cd Length: 116  Bit Score: 67.93  E-value: 1.54e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516619347   17 RLLDLSDAYAQSLYPAESNHLVDLSvLEKPSVSFLVARNGDAIVGCCALVEAGD--GTAEIKRMFVDPEARGLRIASGLM 94
Cdd:pfam00583   3 ALYELLSEEFPEPWPDEPLDLLEDW-DEDASEGFFVAEEDGELVGFASLSIIDDepPVGEIEGLAVAPEYRGKGIGTALL 81

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 516619347   95 NALEAIAGEKELTAIRLETCIYQPEAIALYRKYGY 129
Cdd:pfam00583  82 QALLEWARERGCERIFLEVAADNLAAIALYEKLGF 116
COG3393 COG3393
Predicted acetyltransferase, GNAT family [General function prediction only];
59-142 7.49e-15

Predicted acetyltransferase, GNAT family [General function prediction only];


Pssm-ID: 442620 [Multi-domain]  Cd Length: 86  Bit Score: 65.32  E-value: 7.49e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516619347  59 IVGCCALVEAGDGTAEIKRMFVDPEARGLRIASGLMNALEAIAGEKELTAIRLETCIYQPEAIALYRKYGYREIEPFGSY 138
Cdd:COG3393    2 LVAMAGVRAESPGVAEISGVYTHPEYRGRGLASALVAALAREALARGARTPFLYVDADNPAARRLYERLGFRPVGEYATV 81


                 ....
gi 516619347 139 LPDP 142
Cdd:COG3393   82 LFRK 85
MnaT COG1247
L-amino acid N-acyltransferase MnaT [Amino acid transport and metabolism];
46-151 7.05e-13

L-amino acid N-acyltransferase MnaT [Amino acid transport and metabolism];


Pssm-ID: 440860 [Multi-domain]  Cd Length: 163  Bit Score: 62.32  E-value: 7.05e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516619347  46 PSVSFLVARNGDAIVGCCALV-----EAGDGTAEIKrMFVDPEARGLRIASGLMNALEAIAGEKELTAIRLETCIYQPEA 120
Cdd:COG1247   50 PGRPVLVAEEDGEVVGFASLGpfrprPAYRGTAEES-IYVDPDARGRGIGRALLEALIERARARGYRRLVAVVLADNEAS 128

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 516619347 121 IALYRKYGYREI---EPFGSYLPDPLSL-FMEKRL 151
Cdd:COG1247  129 IALYEKLGFEEVgtlPEVGFKFGRWLDLvLMQKRL 163
NAT_SF cd04301
N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer ...
 50-112 9.53e-12

N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate; NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransferase, Myristoyl-CoA: protein N-myristoyltransferase, and Acyl-homoserinelactone synthase which have a similar catalytic mechanism but differ in types of acyl groups transferred. Leucyl/phenylalanyl-tRNA-protein transferase and FemXAB nonribosomal peptidyltransferases which catalyze similar peptidyltransferase reactions are also included.


Pssm-ID: 173926 [Multi-domain]  Cd Length: 65  Bit Score: 56.90  E-value: 9.53e-12
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 516619347  50 FLVARNGDAIVGCCALV--EAGDGTAEIKRMFVDPEARGLRIASGLMNALEAIAGEKELTAIRLE 112
Cdd:cd04301    1 FLVAEDDGEIVGFASLSpdGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRLE 65
Acetyltransf_10 pfam13673
Acetyltransferase (GNAT) domain; This family contains proteins with N-acetyltransferase ...
 43-134 1.02e-11

Acetyltransferase (GNAT) domain; This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.


Pssm-ID: 463953 [Multi-domain]  Cd Length: 128  Bit Score: 58.44  E-value: 1.02e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516619347   43 LEKPSVSFLVARNGDAIVGCCALveagDGTAEIKRMFVDPEARGLRIASGLMNALEAIAGEKELTAIRLeTCIYQPEAIA 122
Cdd:pfam13673  26 IDQGEYFFFVAFEGGQIVGVIAL----RDRGHISLLFVDPDYQGQGIGKALLEAVEDYAEKDGIKLSEL-TVNASPYAVP 100

                          90
                  ....*....|..
gi 516619347  123 LYRKYGYREIEP 134
Cdd:pfam13673 101 FYEKLGFRATGP 112
PRK07757 PRK07757
N-acetyltransferase;
49-140 2.42e-11

N-acetyltransferase;


Pssm-ID: 236088 [Multi-domain]  Cd Length: 152  Bit Score: 57.90  E-value: 2.42e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516619347  49 SFLVARNGDAIVGCCALVEAGDGTAEIKRMFVDPEARGLRIASGLMNALEAIAgeKELTAIRLETCIYQPEaiaLYRKYG 128
Cdd:PRK07757  42 DFYVAEEEGEIVGCCALHILWEDLAEIRSLAVSEDYRGQGIGRMLVEACLEEA--RELGVKRVFALTYQPE---FFEKLG 116

                         90
                 ....*....|..
gi 516619347 129 YREIEPfgSYLP 140
Cdd:PRK07757 117 FREVDK--EALP 126
PRK03624 PRK03624
putative acetyltransferase; Provisional
 50-152 7.12e-05

putative acetyltransferase; Provisional


Pssm-ID: 235142 [Multi-domain]  Cd Length: 140  Bit Score: 40.30  E-value: 7.12e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516619347  50 FLVARNGDAIVGCcalVEAG-DG-TAEIKRMFVDPEARGLRIASGLMNALeaiagEKELTA-----IRLETCIYQPEAIA 122
Cdd:PRK03624  47 FLVAEVGGEVVGT---VMGGyDGhRGWAYYLAVHPDFRGRGIGRALVARL-----EKKLIArgcpkINLQVREDNDAVLG 118

                         90       100       110
                 ....*....|....*....|....*....|
gi 516619347 123 LYRKYGYREIEpfgsylpdplSLFMEKRLG 152
Cdd:PRK03624 119 FYEALGYEEQD----------RISLGKRLI 138
RimL COG1670
Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, ...
 51-132 2.62e-04

Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 441276 [Multi-domain]  Cd Length: 173  Bit Score: 39.21  E-value: 2.62e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516619347  51 LVARNGDAIVGCCAL--VEAGDGTAEIkRMFVDPEARGLRIASGLMNALEAIAGEkELTAIRLETCIYqPE---AIALYR 125
Cdd:COG1670   65 IEDKEDGELIGVVGLydIDRANRSAEI-GYWLAPAYWGKGYATEALRALLDYAFE-ELGLHRVEAEVD-PDntaSIRVLE 141


                 ....*..
gi 516619347 126 KYGYREI 132
Cdd:COG1670  142 KLGFRLE 148
PRK07922 PRK07922
amino-acid N-acetyltransferase;
42-133 3.43e-04

amino-acid N-acetyltransferase;


Pssm-ID: 236132 [Multi-domain]  Cd Length: 169  Bit Score: 38.75  E-value: 3.43e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516619347  42 VLEKPSVS-------FLVARNGD-AIVGCCALVEAGDGTAEIKRMFVDPEARGLRIASGLMNALEAIAGEKELTaiRL-- 111
Cdd:PRK07922  32 LLEKNLVTlyeavqeFWVAEHLDgEVVGCGALHVMWEDLAEIRTVAVDPAARGRGVGHAIVERLLDVARELGLS--RVfv 109

                         90       100
                 ....*....|....*....|....*
gi 516619347 112 ---ETciyqpeaiALYRKYGYREIE 133
Cdd:PRK07922 110 ltfEV--------EFFARHGFVEID 126
PRK10975 PRK10975
dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase;
51-128 7.73e-03

dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase;


Pssm-ID: 182877  Cd Length: 194  Bit Score: 35.29  E-value: 7.73e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 516619347  51 LVARN-GDAIVGCCALVEAGDGTAEIKRMFVDPEARGLRIASGLMNALEAIAGEKELTAIRLETCIYQPEAIALYRKYG 128
Cdd:PRK10975 104 LLLRDaSGQIQGFVTLRELNDTDARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLTRLRVATQMGNLAALRLYIRSG 182
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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