|
Name |
Accession |
Description |
Interval |
E-value |
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
46-750 |
3.57e-116 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 366.74 E-value: 3.57e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 46 QKIVVKGKRAAPGSVAD---TPVSTE-ITDKKLDEKQVTNIEDLGRSVdPGINASRG----DAGINLRGLSGPRILTIVD 117
Cdd:TIGR01786 1 DTITVTATRTADPQRRDlsvTPASVSvISREQLKSQQVRNLRDLLRYE-PGVSVVEGgrggSQGINIRGLDKNRVAVLVD 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 118 GIPIPYlSNSSRQGAFAPANangggdTFDFNSLSSLDIVRGADSSRGGSGMLGGAIVVNTLEPEDLIPVGRDWGAIVKST 197
Cdd:TIGR01786 80 GIRQNT-SYGGQGSTFYAIN------SIDPELIKSIEIVKGASSSLYGSGALGGVVAFRTKDAADLLKPGKDLGGLSKLG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 198 YDSEDRSISGSAAAAKKIGNTSILFQGGYRKGHE-RDNMGDSDSYGRYRTESDPADFDQHNLLFKLRQEFEGGHRLGLTA 276
Cdd:TIGR01786 153 YSSANNRFTQSVAAAGRNDDVDALVQATYRRGHElKNGNKANIGNESKRSKPNPSDYKSQSFLAKLGWQLNDAHRLGLSL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 277 ERFRRDLQTDK--RDLQGTGRTYMIDNYDARELNDRD----RVSLDYDYeaTSSDAFFTSARAVLYWQDLK---KESGTN 347
Cdd:TIGR01786 233 EYTQTDYDEPEmtNTSYLTKPLGAPLLSSTVVLGDSKtrdrRTGLDYEL--NPDNSWLDTVKLALDKQYIQlynYLNATS 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 348 GRTAANVAYGRTNeiENKTWGFNGTVTKDF--EYSNVRHSVKATLEATTSDwTQYSSALCPTPTTCPSLN-NQSEVPDVE 424
Cdd:TIGR01786 311 ASDYPGVDKNGRY--KDKYDYYTLGFDTNNkiEFSVHSLSLTYGLDRFKDK-VSTGDSRRNLPTAAYNLYgYEGENRPVK 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 425 SKTIGLSIEDKIEFGDtNFALTPGIRFDWFSYDPSTSGGFASNPalakfgtlSDRSDQHVSPKVLATYELTPDVQLYTQL 504
Cdd:TIGR01786 388 GSNFGLFLQDNIKLGD-WLSLSAGLRYDHYKTDPKADESKDYGA--------ISKTYSRWSPSLGLTYKPTPWLTLYYSY 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 505 SSAFRAPTVDELYSRFYNAGG-NYAQLGNPDLKPETGYGVEMGANFDTGDFNGRLAVFHNRYHNFIETV------TSVNA 577
Cdd:TIGR01786 459 SQGFRAPSFDELYGTGAHPGGgPYTFLPNPNLKPETSKNWEIGINLHFDQLDFKVSYFRNDYKDFIDLGigvtakGNMAQ 538
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 578 TTGITEFNYTNVSSVTISGIEASA----DKTFNNGINLHAALAYAY--GRNEETTQRLRSVAPFKAIVGGGW--SNETFG 649
Cdd:TIGR01786 539 VGSNTITNYVNIDNARIRGIELSGrydlGSFFSGPDGWTTTLKYGYtkGKDSDTNPWLNAITPLKVVLGLGYdhPDEKWG 618
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 650 FDLSSTLSAGMLTDHLNTPVTNTADT----TFDAPGYAIVDLTGWWTPdqVPGLRVQAGVYNIFDQEYFNALAVRDVNLI 725
Cdd:TIGR01786 619 VGLTLTFSGAKDAVDAYATYYENGEAakagPLRTPSYTVVDLYGYYKP--NKNLTLRFGVYNLLDRKYTTWESARQAGPL 696
|
730 740
....*....|....*....|....*
gi 516735075 726 STasqprdWYSEPGRTFKVSLTKTF 750
Cdd:TIGR01786 697 AT------GYTAPGRNYKASVEYKF 715
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
45-723 |
2.50e-86 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 285.95 E-value: 2.50e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 45 LQKIVVKGKRAApGSVADTPVS-TEITDKKLDEKQVTNIEDLGRSVdPGINASR---GDAGINLRGLSG--PRILTIVDG 118
Cdd:COG1629 1 LEEVVVTATRTD-ESLQDVPGSvSVISREQLEDQPATDLGDLLRRV-PGVSVTSaggGAGQISIRGFGGggNRVLVLVDG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 119 IPIPYlsnssrqgafaPANANGGGDTFDFNSLSSLDIVRGADSSRGGSGMLGGAIVVNTLEPEDlipvgrDWGAIVKSTY 198
Cdd:COG1629 79 VPLND-----------PSGGDGGLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKD------GKGGEVSASY 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 199 DSEDRsISGSAAAAKKIGNTSILFQGGYRkgherdnmgDSDSYGryrtesDPADFDQHNLLFKLRQEFEGGHRLGLTAER 278
Cdd:COG1629 142 GSYGT-YRASLSLSGGNGKLAYRLSASYR---------DSDGYR------DNSDSDRYNLRAKLGYQLGDDTRLTLSASY 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 279 FRRDLQTD----KRDLQGTGRTYMIDN--YDARELNDRDRVSLDYDYEATSSDAFFtsaRAVLYWQ-DLKKESGTNGRTA 351
Cdd:COG1629 206 SDSDQDSPgyltLAALRPRGAMDDGTNpySNDTDDNTRDRYSLSLEYEHLGDGLKL---SASAYYRyDDTDLDSDFTPTP 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 352 ANVAYGRTNEIENKTWGFNGTVTKDFEYsNVRHSVKATLEATTSDWTQYSSALCPTPTTCPSLNNQSEVpDVESKTIGLS 431
Cdd:COG1629 283 ADGGTLEQTDFDNRTYGLELRLTYDLGF-GGKHTLLVGLDYQRQDLDGSGYPLDLGSGSLPTLTSGADD-DGTTTSLALY 360
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 432 IEDKIEFGDtNFALTPGIRFDWFSYDPStsggfasNPALAKFGTLSDRSDQHVSPKVLATYELTPDVQLYTQLSSAFRAP 511
Cdd:COG1629 361 AQDTYKLTD-KLTLTAGLRYDYVSYDVD-------DTVTGTDSASGSRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAP 432
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 512 TVDELYSRfynaGGNYAQLGNPDLKPETGYGVEMGA--NFDTGDFNGRLAVFHNRYHNFIETVTSVNATTGITefNYTNV 589
Cdd:COG1629 433 TFGELYAN----GTDPYSVGNPDLKPETSTNYELGLryRLLDGRLSLSLALFYSDVDNEILSVPLPNDSGFST--YYTNA 506
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 590 SSVTISGIEASADKTFNNGINLHAALAYAYGRNEETT--------QRLRSVAPFKAIVGGGWS-NETFGFDLSSTLSAGM 660
Cdd:COG1629 507 GKARSYGVELELSYQLTPGLSLNASYSYTDAKFDDDTdgsadldgNRLPGVPPLTANLGLTYEfPGGWSLGLGVRYVGDR 586
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 516735075 661 LTDHLNTPVTNtadttfdaPGYAIVDLTGWWTPDqvPGLRVQAGVYNIFDQEYFNALAVRDVN 723
Cdd:COG1629 587 YLDDANTQGAP--------GGYTLVDLGAGYRFG--DNLTLSLGVDNLFDKKYATSLSVRASN 639
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
65-750 |
1.76e-71 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 245.44 E-value: 1.76e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 65 VSTEITDKKLDEKQVTNIEDLGRSVdPGINASRGDAG----INLRGLSGPRILTIVDGIPIpylsnssrqgAFAPANANG 140
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRI-PGVSVTRGGGGggstISIRGFGPDRTLVLVDGLPL----------ASSNYGRGV 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 141 GGDTFDFNSLSSLDIVRGADSSRGGSGMLGGAIVVNTLEPedlipvGRDWGAIVKSTYDSEDRSISGS-----AAAAKKI 215
Cdd:cd01347 70 DLNTIPPELIERVEVLKGPSSALYGSGAIGGVVNIITKRP------TDEFGGSVTAGYGSDNSGSSGGggfdvSGALADD 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 216 GNTSILFQGGYRKGherdnmgdsDSYGRYRTESDPADFDQHNLLFKLRQEFEGGHRLGLTAERFRRDLQTDKRDLQGTGR 295
Cdd:cd01347 144 GAFGARLYGAYRDG---------DGTIDGDGQADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGT 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 296 TYMI--------DNYDARELNDRDRVSLDYDYEATSSDAFFTSaRAVLYWQDLKKESGTNGRTAANVAYGRTNEIENKT- 366
Cdd:cd01347 215 GSSLgggpssntNGDRDWDYRDRYRKRASLGLEHDLNDTGWTL-RANLSYSYTDNDGDPLILNGGNNAAGGDLGRSGYSs 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 367 ------WGFNGTVTKDFEYSNVRHSVKATLEATTSDWTQYSSALcptpttcpslnnqsevpdvesktiglSIEDKIEFGD 440
Cdd:cd01347 294 erdttqLGFDAGLNAPFGTGPVAHTLTLGVEYRREELDEKQTAL--------------------------YAQDTIELTD 347
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 441 tNFALTPGIRFDWFSYDPSTSGGFasnpalakfGTLSDRSDQHVSPKVLATYELTPDVQLYTQLSSAFRAPTVDELYSRF 520
Cdd:cd01347 348 -DLTLTLGLRYDHYDQDSKDTIAG---------GTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGG 417
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 521 YNAGGNYaqLGNPDLKPETGYGVEMGANFDTG-DFNGRLAVFHNRYHNFIETVTSVNATTGITefNYTNVSSVTISGIEA 599
Cdd:cd01347 418 SHGGTAA--VGNPNLKPEKSKQYELGLKYDPGdGLTLSAALFRIDIKNEIVSTPTNTGLGLVT--VYVNGGKARIRGVEL 493
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 600 SADKTFNNGINLHAALAYAYGRNEE-----TTQRLRSVAPFKAIVGGGWS--NETFGFDLSSTLSAGMLTDhlntpvTNT 672
Cdd:cd01347 494 EASYDLTDGLGLTGSYTYTDTEVKRtdgatTGNRLPGIPKHTANLGLDYElpDEGLTAGGGVRYRGKQYAD------TAN 567
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 516735075 673 ADTTFDAPGYAIVDLTGWWTPDQvpGLRVQAGVYNIFDQEYFNALAVRDVNLIStasqprdwYSEPGRTFKVSLTKTF 750
Cdd:cd01347 568 GNNTVKVPGYTLVDLSASYQFTK--NLTLRLGVNNLFDKDYYTSLSVRGSGLYG--------YYGPGRTYYLSVSYKF 635
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
243-747 |
1.02e-55 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 198.46 E-value: 1.02e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 243 RYRTESDPADFDQHNLLFKLRQEFEGGHRLGLTAERFRRDLQTDKRDLQGTGRTYMIDnydarelnDRDRVSLDYDYEAT 322
Cdd:pfam00593 1 GWQLSLDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDT--------DRKRLSLGYDYDLG 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 323 SSDAFFTSARAVLYWQDLKKESGTNGRTAANVAYGRTNEIENKTWGFNGTVTKDFEYSNvRHSVKATLEATTSDWTQYSS 402
Cdd:pfam00593 73 DGLSWLSTLRLGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDLSH-DLLLGVELRTAGLDYRRLDD 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 403 AlcPTPTTCPSLNNQSEVPDVESKTIGLSIEDKIEFGDtNFALTPGIRFDWFSYDPSTSGGFASNpalakfgtlSDRSDQ 482
Cdd:pfam00593 152 D--AYDPYDPANPSSSSYSDTTTDSYGLYLQDNIKLTD-RLTLTLGLRYDHYSTDGDDGNGGGDN---------FSRSYS 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 483 HVSPKVLATYELTPDVQLYTQLSSAFRAPTVDELYSRFYNAGGNYAQLGNPDLKPETGYGVEMGANFDTGDFNGRLAVFH 562
Cdd:pfam00593 220 AFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGSGGGGGAVAGGNPDLKPETSDNYELGLKYDDGRLSLSLALFY 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 563 NRYHNFIETVTSVNATTGITeFNYTNVSSVTISGIEASADKTFNNGINLHAALAYAYGRNEETT----QRLRSVAPFKAI 638
Cdd:pfam00593 300 IDIKNLITSDPDGPGLGGTV-YTYTNVGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDADAddtgNPLPNVPRHTAN 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 639 VGGGWSNETFGFdlssTLSAGMLTDHLNTPVTNTADTTFDAPGYAIVDLTGWWTPDqvPGLRVQAGVYNIFDQEYFNAla 718
Cdd:pfam00593 379 LGLTYDFPLGGW----GARLGARYVGSGERRYGDAANTFKTPGYTLVDLSAGYRLN--KNLTLRLGVNNLFDKYYKRY-- 450
|
490 500
....*....|....*....|....*....
gi 516735075 719 vrdvnlISTASQPRDWYSEPGRTFKVSLT 747
Cdd:pfam00593 451 ------YSSGGGNLGGYPGPGRTFYLGLS 473
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
1-712 |
4.06e-25 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 111.02 E-value: 4.06e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 1 MIVRHWRSVLLVCTAATVvlPVSQSFAQSAtaatpqataEDSTvLQKIVVkgkrAAPGS---VADTPVSTE-ITDKKLDE 76
Cdd:PRK13483 1 MKKYLAQVISALCLLPAV--FVTHALAQAA---------PDKT-METVVV----TASGYeqqIRDAPASISvITREDLEN 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 77 KQVTNIEDLGRSVdPGINASRGD--AGINLRGLSGPRILTIVDGipipyLSNSSRQgafAPANANG----GGDTFDFNSL 150
Cdd:PRK13483 65 RFYRDLTDALLDV-PGVVVTGGGdrTDISLRGMGSQYTLILVDG-----KRQSSRE---TRPNSDGpgveQAWTPPLAAI 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 151 SSLDIVRGADSSRGGSGMLGGAIVVNTLEpedlipVGRDWGAIVKSTYDSEDRSISGSAAAAKKIGNTSIL-------FQ 223
Cdd:PRK13483 136 ERIEVIRGPMSSLYGSDAIGGVINIITRK------VPNEWQGEVRLDTTLQENSDSGNVYQANFFVNGPLIkdllglqLY 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 224 GGYRKGHERDNMGdsdSYGRYRTESDPADF-----DQHNLLFKL---RQEFEGghRLGLTAERFRRDLQTDKRDL-QGTG 294
Cdd:PRK13483 210 GQYTQREEDDIEG---GYRDKDARSLTAKLaltpnEDHDIMLEVgtsNQERDS--TVGKTVAPLAPGESCGRRGCpESST 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 295 RTYmidnydarelnDRDRVSLDY--DYEATSSDAFftsaravlywqdLKKESGTNGRTAANVaygrTNEIENKTW----G 368
Cdd:PRK13483 285 TEY-----------ERSTVSLSHtgRWDFGTSDTY------------IQHEEFDNKSREMKI----KNTDFQSSLvaplG 337
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 369 FNGTVTKDFEYSnvrhsvKATLEATTSdwtqyssalcptpttcpslNNQSEVPDVESKTIGLSIEDKIEFGDtNFALTPG 448
Cdd:PRK13483 338 QEHTLTFGAAYN------HQDLTDETS-------------------NQISDLTDISRTQWAVFSEDEWRIAD-DFALTGG 391
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 449 IRFDwfsyDPSTSGGfasnpalakfgtlsdrsdqHVSPKVLATYELTPDVQLYTQLSSAFRAPTVDEL------YSRfyn 522
Cdd:PRK13483 392 LRLD----HDENFGG-------------------HVSPRVYGVWNLAPSWTVKGGVSTGFRAPSLRQTtpdwgqVSR--- 445
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 523 aGGNYaqLGNPDLKPETGYGVEMGANFDTGD-FNGRLAVFHNRYHNFIETVT--SVNATTGITEFN-----YTNVSSVTI 594
Cdd:PRK13483 446 -GGNI--YGNPDLKPETSLNKELGLYYDLGSgLTASLTVFYNEFKDKITRVAcpATQCTDGPNQFGadpttYVNIDEAVT 522
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 595 SGIEASADKTFNNGINLHAalAYAYGRNEETTqrlrsvAPFKaivgGGWSNETFGFDLSSTLSAgMLTDHLNT------- 667
Cdd:PRK13483 523 QGVEASLSYPITSTLSLSG--NYTYTDSEQKS------GAYK----GSPLNQLPKHLFQASLNW-EPTDRLNSwarvnyr 589
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|
gi 516735075 668 -----PVTNTADTTFDAPGYAIVDLTGWWTPDQvpGLRVQAGVYNIFDQE 712
Cdd:PRK13483 590 geesqPTTGPSSSSFIAPSYTFLDLGANYQLTD--NLKLSAGIYNLFDKE 637
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
46-750 |
3.57e-116 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 366.74 E-value: 3.57e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 46 QKIVVKGKRAAPGSVAD---TPVSTE-ITDKKLDEKQVTNIEDLGRSVdPGINASRG----DAGINLRGLSGPRILTIVD 117
Cdd:TIGR01786 1 DTITVTATRTADPQRRDlsvTPASVSvISREQLKSQQVRNLRDLLRYE-PGVSVVEGgrggSQGINIRGLDKNRVAVLVD 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 118 GIPIPYlSNSSRQGAFAPANangggdTFDFNSLSSLDIVRGADSSRGGSGMLGGAIVVNTLEPEDLIPVGRDWGAIVKST 197
Cdd:TIGR01786 80 GIRQNT-SYGGQGSTFYAIN------SIDPELIKSIEIVKGASSSLYGSGALGGVVAFRTKDAADLLKPGKDLGGLSKLG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 198 YDSEDRSISGSAAAAKKIGNTSILFQGGYRKGHE-RDNMGDSDSYGRYRTESDPADFDQHNLLFKLRQEFEGGHRLGLTA 276
Cdd:TIGR01786 153 YSSANNRFTQSVAAAGRNDDVDALVQATYRRGHElKNGNKANIGNESKRSKPNPSDYKSQSFLAKLGWQLNDAHRLGLSL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 277 ERFRRDLQTDK--RDLQGTGRTYMIDNYDARELNDRD----RVSLDYDYeaTSSDAFFTSARAVLYWQDLK---KESGTN 347
Cdd:TIGR01786 233 EYTQTDYDEPEmtNTSYLTKPLGAPLLSSTVVLGDSKtrdrRTGLDYEL--NPDNSWLDTVKLALDKQYIQlynYLNATS 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 348 GRTAANVAYGRTNeiENKTWGFNGTVTKDF--EYSNVRHSVKATLEATTSDwTQYSSALCPTPTTCPSLN-NQSEVPDVE 424
Cdd:TIGR01786 311 ASDYPGVDKNGRY--KDKYDYYTLGFDTNNkiEFSVHSLSLTYGLDRFKDK-VSTGDSRRNLPTAAYNLYgYEGENRPVK 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 425 SKTIGLSIEDKIEFGDtNFALTPGIRFDWFSYDPSTSGGFASNPalakfgtlSDRSDQHVSPKVLATYELTPDVQLYTQL 504
Cdd:TIGR01786 388 GSNFGLFLQDNIKLGD-WLSLSAGLRYDHYKTDPKADESKDYGA--------ISKTYSRWSPSLGLTYKPTPWLTLYYSY 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 505 SSAFRAPTVDELYSRFYNAGG-NYAQLGNPDLKPETGYGVEMGANFDTGDFNGRLAVFHNRYHNFIETV------TSVNA 577
Cdd:TIGR01786 459 SQGFRAPSFDELYGTGAHPGGgPYTFLPNPNLKPETSKNWEIGINLHFDQLDFKVSYFRNDYKDFIDLGigvtakGNMAQ 538
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 578 TTGITEFNYTNVSSVTISGIEASA----DKTFNNGINLHAALAYAY--GRNEETTQRLRSVAPFKAIVGGGW--SNETFG 649
Cdd:TIGR01786 539 VGSNTITNYVNIDNARIRGIELSGrydlGSFFSGPDGWTTTLKYGYtkGKDSDTNPWLNAITPLKVVLGLGYdhPDEKWG 618
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 650 FDLSSTLSAGMLTDHLNTPVTNTADT----TFDAPGYAIVDLTGWWTPdqVPGLRVQAGVYNIFDQEYFNALAVRDVNLI 725
Cdd:TIGR01786 619 VGLTLTFSGAKDAVDAYATYYENGEAakagPLRTPSYTVVDLYGYYKP--NKNLTLRFGVYNLLDRKYTTWESARQAGPL 696
|
730 740
....*....|....*....|....*
gi 516735075 726 STasqprdWYSEPGRTFKVSLTKTF 750
Cdd:TIGR01786 697 AT------GYTAPGRNYKASVEYKF 715
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
45-750 |
2.08e-104 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 334.36 E-value: 2.08e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 45 LQKIVVKGKRAaPGSVADTPVSTE-ITDKKLDEKQVTNIEDLGRSVdPGINAS-RGDAG---INLRGLSGPRILTIVDGI 119
Cdd:TIGR01785 1 LDTVTVTATRT-RQVLSEAPASVSvISGEQIESKQANNLADALNTV-PGVDVTgGGRPPgqsINIRGLQDNRVLVVVDGA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 120 PIPYLSNSSRQGAFapanangggdTFDFNSLSSLDIVRGADSSRGGSGMLGGAIVVNTLEPEDLIPVGRDWGAIVKSTYD 199
Cdd:TIGR01785 79 RQNYQRGGAHNGSL----------FVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAADLLRPGQLFGGLAKLSYG 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 200 SEDRSISGSAAAAKKIG-NTSILFQGGYRKGHERDNMGDSDSYgryrtesdPADFDQHNLLFKLRQEFEGGHRLGLTAer 278
Cdd:TIGR01785 149 SNNNSFGGSVAVAGRLDdNLDALVAATYRDGGNYRNGNKEEAT--------NSAYVQKNLLAKLGWQLDDAQRLEFSY-- 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 279 FRRDLQTDKRDLQGTGRTYMIDNYDARELNDRDRVSLDYDYEATSSDAFFTSARAVLYWQDLKKESGTNGRTaanvaYGR 358
Cdd:TIGR01785 219 FTTEGSLDEAQNSGPGTEYVLGSSSTLLASSTRDRSATLTYNWTPEDNPWLDATASLYYNRTENDNDRSARG-----VGR 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 359 TNEIENKTWGFNGTVTKDFEYSNVRHSVKAtLEATTSDWTQYSSalcpTPTTCPSLNnqSEVPDVESKTIGLSIEDKIEF 438
Cdd:TIGR01785 294 EEGYQYTTYGATLQNTSRFDVASWSTLTYG-VDWMKDKRRTESF----DPNSVTTIV--PNPPSAKEYFFGLFLQDNIPL 366
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 439 GDTNFALTPGIRFDWFSYDPSTSGGFASnpalakfgtlSDRSDQHVSPKVLATYELTPDVQLYTQLSSAFRAPTVDELYS 518
Cdd:TIGR01785 367 LDDRLTLSAGLRYDHYKLSPKTTADTEA----------VDRSYSRWSPSLGLSYKPVDWLTLYASYSQGFRAPSIDELYG 436
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 519 RFYNAGGN--YAQLGNPDLKPETGYGVEMGAN-------FDTGDFNGRLAVFHNRYHNFIETVTSV--NATTGITEF-NY 586
Cdd:TIGR01785 437 TGDHPGTPggYTFAPNPNLKPETSKTWELGANlsfdnllLDNDQLQFKVAYFYNDVKDFIDLTIGVtdNVTAGMNNItQY 516
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 587 TNVSSVTISGIEASADKTFNNgINLHAALAYAYGRNEETTQRLRSVAPFKAIVGGGWSNETFGFDLSSTLSAGMLTDHLN 666
Cdd:TIGR01785 517 VNIDGARIRGIEASASYDAGL-WATGLSYGYTIGKDQNTNQWLSNIPPLKLVVTVGYRFPDRRLDLGAKAAYYERQSESP 595
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 667 TPVTNTADTTFDAPGYAIVDLTGWWTPDQVPGLRVQAGVYNIFDQEYFNALAVRdvnlistasqprdwYSEPGRTFKVSL 746
Cdd:TIGR01785 596 TTEDVAANGLLTTPGYTVVDLYATYQPNAVKGLTVRFGVNNLTDRKYTPAQSVP--------------GAGPGRNFKGSV 661
|
....
gi 516735075 747 TKTF 750
Cdd:TIGR01785 662 KYQF 665
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
45-723 |
2.50e-86 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 285.95 E-value: 2.50e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 45 LQKIVVKGKRAApGSVADTPVS-TEITDKKLDEKQVTNIEDLGRSVdPGINASR---GDAGINLRGLSG--PRILTIVDG 118
Cdd:COG1629 1 LEEVVVTATRTD-ESLQDVPGSvSVISREQLEDQPATDLGDLLRRV-PGVSVTSaggGAGQISIRGFGGggNRVLVLVDG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 119 IPIPYlsnssrqgafaPANANGGGDTFDFNSLSSLDIVRGADSSRGGSGMLGGAIVVNTLEPEDlipvgrDWGAIVKSTY 198
Cdd:COG1629 79 VPLND-----------PSGGDGGLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKD------GKGGEVSASY 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 199 DSEDRsISGSAAAAKKIGNTSILFQGGYRkgherdnmgDSDSYGryrtesDPADFDQHNLLFKLRQEFEGGHRLGLTAER 278
Cdd:COG1629 142 GSYGT-YRASLSLSGGNGKLAYRLSASYR---------DSDGYR------DNSDSDRYNLRAKLGYQLGDDTRLTLSASY 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 279 FRRDLQTD----KRDLQGTGRTYMIDN--YDARELNDRDRVSLDYDYEATSSDAFFtsaRAVLYWQ-DLKKESGTNGRTA 351
Cdd:COG1629 206 SDSDQDSPgyltLAALRPRGAMDDGTNpySNDTDDNTRDRYSLSLEYEHLGDGLKL---SASAYYRyDDTDLDSDFTPTP 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 352 ANVAYGRTNEIENKTWGFNGTVTKDFEYsNVRHSVKATLEATTSDWTQYSSALCPTPTTCPSLNNQSEVpDVESKTIGLS 431
Cdd:COG1629 283 ADGGTLEQTDFDNRTYGLELRLTYDLGF-GGKHTLLVGLDYQRQDLDGSGYPLDLGSGSLPTLTSGADD-DGTTTSLALY 360
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 432 IEDKIEFGDtNFALTPGIRFDWFSYDPStsggfasNPALAKFGTLSDRSDQHVSPKVLATYELTPDVQLYTQLSSAFRAP 511
Cdd:COG1629 361 AQDTYKLTD-KLTLTAGLRYDYVSYDVD-------DTVTGTDSASGSRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAP 432
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 512 TVDELYSRfynaGGNYAQLGNPDLKPETGYGVEMGA--NFDTGDFNGRLAVFHNRYHNFIETVTSVNATTGITefNYTNV 589
Cdd:COG1629 433 TFGELYAN----GTDPYSVGNPDLKPETSTNYELGLryRLLDGRLSLSLALFYSDVDNEILSVPLPNDSGFST--YYTNA 506
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 590 SSVTISGIEASADKTFNNGINLHAALAYAYGRNEETT--------QRLRSVAPFKAIVGGGWS-NETFGFDLSSTLSAGM 660
Cdd:COG1629 507 GKARSYGVELELSYQLTPGLSLNASYSYTDAKFDDDTdgsadldgNRLPGVPPLTANLGLTYEfPGGWSLGLGVRYVGDR 586
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 516735075 661 LTDHLNTPVTNtadttfdaPGYAIVDLTGWWTPDqvPGLRVQAGVYNIFDQEYFNALAVRDVN 723
Cdd:COG1629 587 YLDDANTQGAP--------GGYTLVDLGAGYRFG--DNLTLSLGVDNLFDKKYATSLSVRASN 639
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
19-695 |
6.98e-79 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 265.18 E-value: 6.98e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 19 VLPVSQSFAQSATAATPQATAEDSTVLQKIVVKGKRAAPgSVADTPVSTE-ITDKKLDEKQVTNIEDLGRSVdPGINASR 97
Cdd:COG4771 1 LLLASLLLLLALAAQAADALAEDATELEEVVVTATRTEQ-SLSDAPASVSvITAEEIEKLGATDLADALRLL-PGVSVTR 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 98 -----GDAGINLRGLSGPRILTIVDGIPIPYLSNSSRqgafapananGGGDTFDFNSLSSLDIVRGADSSRGGSGMLGGA 172
Cdd:COG4771 79 sggrgGSSGISIRGLGGDRVLVLIDGVPVNNPALGGG----------GDLSYIPPDDIERIEVIRGPASALYGSDAIGGV 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 173 IVVNTLEPEDlipvgrDWGAIVKSTYDSEDR-SISGSAAAAKKIGNTSILFQGGYRKGHERDNMgdsdsygRYRTESDPA 251
Cdd:COG4771 149 INIITKKPTD------ELEGSVSLGYGSNGNgTYSGSLSLGGPGDKLSFLLSGSYRDRDGYLDY-------RNGGFVGNS 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 252 DFDQHNLLFKLRQEFEGGHRLGLTAERFRRDLQTDKRDLqGTGRTYMIDNYDARELNDRDRVSLDYDYEatssdaFFTSA 331
Cdd:COG4771 216 GYERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPPTL-GDTEISSDNAGDRDTTTDRGNYSLRYNGD------LGDNL 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 332 RAVLYWQDLKKESGTNGRTAANVAYGRTneiENKTWGFNGTVTKDFeysNVRHSVKATLEATTSDWTQYSSalcptpttc 411
Cdd:COG4771 289 DLSLYYSRTDRDSTNGSLGGSTGSFSDS---DDTTYGLELDLTYPL---GGNHTLTLGAEYRYDDLDSSSF--------- 353
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 412 pslnnqSEVPDVESKTIGLSIEDKIEFGDtNFALTPGIRFDWFSYdpstsggfasnpalakfgtLSDRSDQHVSPKVLAT 491
Cdd:COG4771 354 ------LGGADASRDTYGLFAQDEWKLTD-KLTLTAGLRYDYYST-------------------FGASNYTAFSPRLGLR 407
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 492 YELTPDVQLYTQLSSAFRAPTVDELYSRFYNAGGNYAqLGNPDLKPETGYGVEMGA--NFDTGDFNGRLAVFHNRYHNFI 569
Cdd:COG4771 408 YDLSDNLTLRASYGRGFRAPSLAELYGSGTGTPGRYV-LGNPDLKPETSDNYELGLeyRLGNGGLSLSLTGFYTDIKDLI 486
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 570 ETVTSVNATTGIteFNYTNVSSVTISGIEASADKTFNNGINLHAALAYAYGRNE--ETTQRLRSVAPFKAIVGGGWSNET 647
Cdd:COG4771 487 VLVPVGPGPGDV--LQYENVGKARTYGLELELKYRLGKGLTLTASYTYLDSKIDdgDTGEPLPNVPPHKANLGLDYRLPK 564
|
650 660 670 680
....*....|....*....|....*....|....*....|....*...
gi 516735075 648 FGFDLSSTLSAGMltdhlNTPVTNTADTTFDAPGYAIVDLTGWWTPDQ 695
Cdd:COG4771 565 WWLLLLLTRYYGG-----RYVTPPSGRLEGYTPGYTLLDLRASYKLTK 607
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
65-750 |
1.76e-71 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 245.44 E-value: 1.76e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 65 VSTEITDKKLDEKQVTNIEDLGRSVdPGINASRGDAG----INLRGLSGPRILTIVDGIPIpylsnssrqgAFAPANANG 140
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRI-PGVSVTRGGGGggstISIRGFGPDRTLVLVDGLPL----------ASSNYGRGV 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 141 GGDTFDFNSLSSLDIVRGADSSRGGSGMLGGAIVVNTLEPedlipvGRDWGAIVKSTYDSEDRSISGS-----AAAAKKI 215
Cdd:cd01347 70 DLNTIPPELIERVEVLKGPSSALYGSGAIGGVVNIITKRP------TDEFGGSVTAGYGSDNSGSSGGggfdvSGALADD 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 216 GNTSILFQGGYRKGherdnmgdsDSYGRYRTESDPADFDQHNLLFKLRQEFEGGHRLGLTAERFRRDLQTDKRDLQGTGR 295
Cdd:cd01347 144 GAFGARLYGAYRDG---------DGTIDGDGQADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGT 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 296 TYMI--------DNYDARELNDRDRVSLDYDYEATSSDAFFTSaRAVLYWQDLKKESGTNGRTAANVAYGRTNEIENKT- 366
Cdd:cd01347 215 GSSLgggpssntNGDRDWDYRDRYRKRASLGLEHDLNDTGWTL-RANLSYSYTDNDGDPLILNGGNNAAGGDLGRSGYSs 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 367 ------WGFNGTVTKDFEYSNVRHSVKATLEATTSDWTQYSSALcptpttcpslnnqsevpdvesktiglSIEDKIEFGD 440
Cdd:cd01347 294 erdttqLGFDAGLNAPFGTGPVAHTLTLGVEYRREELDEKQTAL--------------------------YAQDTIELTD 347
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 441 tNFALTPGIRFDWFSYDPSTSGGFasnpalakfGTLSDRSDQHVSPKVLATYELTPDVQLYTQLSSAFRAPTVDELYSRF 520
Cdd:cd01347 348 -DLTLTLGLRYDHYDQDSKDTIAG---------GTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGG 417
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 521 YNAGGNYaqLGNPDLKPETGYGVEMGANFDTG-DFNGRLAVFHNRYHNFIETVTSVNATTGITefNYTNVSSVTISGIEA 599
Cdd:cd01347 418 SHGGTAA--VGNPNLKPEKSKQYELGLKYDPGdGLTLSAALFRIDIKNEIVSTPTNTGLGLVT--VYVNGGKARIRGVEL 493
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 600 SADKTFNNGINLHAALAYAYGRNEE-----TTQRLRSVAPFKAIVGGGWS--NETFGFDLSSTLSAGMLTDhlntpvTNT 672
Cdd:cd01347 494 EASYDLTDGLGLTGSYTYTDTEVKRtdgatTGNRLPGIPKHTANLGLDYElpDEGLTAGGGVRYRGKQYAD------TAN 567
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 516735075 673 ADTTFDAPGYAIVDLTGWWTPDQvpGLRVQAGVYNIFDQEYFNALAVRDVNLIStasqprdwYSEPGRTFKVSLTKTF 750
Cdd:cd01347 568 GNNTVKVPGYTLVDLSASYQFTK--NLTLRLGVNNLFDKDYYTSLSVRGSGLYG--------YYGPGRTYYLSVSYKF 635
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
40-735 |
1.71e-63 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 224.81 E-value: 1.71e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 40 EDSTVLQKIVVKGKRAAPGSVADTPVS-TEITDKKLDEKQVTNIEDLGRSVdPGINA-SRGDAG----INLRGLSG---P 110
Cdd:COG4772 18 EAATTLETVVVTGSRAAEARLKDVPGSvSVVDREELENQAATSLREVLRRV-PGVNVqEEDGFGlrpnIGIRGLGPrrsR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 111 RILTIVDGIPIpylsnssrqgAFAPANANGGGDTFDFNSLSSLDIVRGADSSRGGSGMLGGAIVVNTLEPEDlipvgrDW 190
Cdd:COG4772 97 GITLLEDGIPI----------APAPYGDPAAYYFPDLERMERIEVLRGAAALRYGPQTVGGAINFVTRTIPT------AF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 191 GAIVKSTYDSEDrSISGSAAAAKKIGNTSILFQGGYRKGH-ERDNmgdsdsygryrtesdpADFDQHNLLFKLRQEFEGG 269
Cdd:COG4772 161 GGELRVTGGSFG-YRRTHASVGGTVGNFGYLVEYSRKRGDgFRDN----------------SGFDINDFNAKLGYRLSDR 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 270 HRL---------------GLTAERFRRD-LQTDKRDLQGTGRTYMIDNYDARELNDRDRVSLDYDYEATSSDAFFTSARA 333
Cdd:COG4772 224 QELtlkfqyydedantpgGLTDAQFDADpRQSYRPADQFDTRRTQLSLRYEHQLSDNTTLTTTAYYNDFSRNWYIRQNTA 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 334 vlywqdlkkesgtngRTAANVAYGRTNEIENKTWGFNGTVTKDFEYSNVRH--SVKATLEATTSDWTQYSSALCPTPTTC 411
Cdd:COG4772 304 ---------------DPNTPGLGLRGNPRGYRSYGIEPRLTHRFELGGVPHtlEVGLRYHREEEDRKQYVNTYGQGRSGA 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 412 PSLNNQSEvpdvESKTIGLSIEDKIEFGDtNFALTPGIRFDWFSYDPSTSGGFASNPALAkfgtlSDRSDQHVSPKVLAT 491
Cdd:COG4772 369 GLRRDRRF----SADALAAYAQNRFELTG-RLTLTPGLRYEHIRRDRTDRYSTRTGGDDS-----GSNSYSEFLPGLGLL 438
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 492 YELTPDVQLYTQLSSAFRAPTVDELysrfynaggNYAQLGNPDLKPETGYGVEMGANFDTGD-FNGRLAVFHNRYHNFIE 570
Cdd:COG4772 439 YQLTDNLQLYANVSRGFEPPTFGDL---------AYGNGGNPDLKPEKSWNYELGTRGRIGNgLSAEVALFYIDYDNELG 509
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 571 TVTSVNATTGItefnYTNVSSVTISGIEASADKTF----NNGINLHAALAYAYGRNEETT------QRLRSVAPFKAIVG 640
Cdd:COG4772 510 SCSAAGGDRST----FTNAGETRHQGLELALDYDLlkggGLGLPLFAAYTYTDAEFTSDFgpvfagNRLPYVPRHQLTAG 585
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 641 GGWSNETFGFDLSSTLSAGMLTDHLNTPVTNTADTtfdAPGYAIVDLTGWWtpDQVPGLRVQAGVYNIFDQEYFNALAVR 720
Cdd:COG4772 586 LGYEHGGWTANLNGRYVSEQFTDAANTVADGSFGK---IPSYTVLDLSASY--DFGKNLSLFAGVNNLFDKRYIASRAPN 660
|
730
....*....|....*
gi 516735075 721 DVNLIsTASQPRDWY 735
Cdd:COG4772 661 YAAGI-RPGPPRTVY 674
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
243-747 |
1.02e-55 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 198.46 E-value: 1.02e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 243 RYRTESDPADFDQHNLLFKLRQEFEGGHRLGLTAERFRRDLQTDKRDLQGTGRTYMIDnydarelnDRDRVSLDYDYEAT 322
Cdd:pfam00593 1 GWQLSLDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDT--------DRKRLSLGYDYDLG 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 323 SSDAFFTSARAVLYWQDLKKESGTNGRTAANVAYGRTNEIENKTWGFNGTVTKDFEYSNvRHSVKATLEATTSDWTQYSS 402
Cdd:pfam00593 73 DGLSWLSTLRLGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDLSH-DLLLGVELRTAGLDYRRLDD 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 403 AlcPTPTTCPSLNNQSEVPDVESKTIGLSIEDKIEFGDtNFALTPGIRFDWFSYDPSTSGGFASNpalakfgtlSDRSDQ 482
Cdd:pfam00593 152 D--AYDPYDPANPSSSSYSDTTTDSYGLYLQDNIKLTD-RLTLTLGLRYDHYSTDGDDGNGGGDN---------FSRSYS 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 483 HVSPKVLATYELTPDVQLYTQLSSAFRAPTVDELYSRFYNAGGNYAQLGNPDLKPETGYGVEMGANFDTGDFNGRLAVFH 562
Cdd:pfam00593 220 AFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGSGGGGGAVAGGNPDLKPETSDNYELGLKYDDGRLSLSLALFY 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 563 NRYHNFIETVTSVNATTGITeFNYTNVSSVTISGIEASADKTFNNGINLHAALAYAYGRNEETT----QRLRSVAPFKAI 638
Cdd:pfam00593 300 IDIKNLITSDPDGPGLGGTV-YTYTNVGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDADAddtgNPLPNVPRHTAN 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 639 VGGGWSNETFGFdlssTLSAGMLTDHLNTPVTNTADTTFDAPGYAIVDLTGWWTPDqvPGLRVQAGVYNIFDQEYFNAla 718
Cdd:pfam00593 379 LGLTYDFPLGGW----GARLGARYVGSGERRYGDAANTFKTPGYTLVDLSAGYRLN--KNLTLRLGVNNLFDKYYKRY-- 450
|
490 500
....*....|....*....|....*....
gi 516735075 719 vrdvnlISTASQPRDWYSEPGRTFKVSLT 747
Cdd:pfam00593 451 ------YSSGGGNLGGYPGPGRTFYLGLS 473
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
59-750 |
9.07e-36 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 143.86 E-value: 9.07e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 59 SVADTPVS-TEITDKKLDEKQVTNIEDLGRSVdPGINASRGDAG----INLRGLSGpRILTIVDGIPIPylsnssrqgaf 133
Cdd:COG4774 5 PLLDTPQSvTVVTRELIEDQGATSLADALRNV-PGVTFGAGEGGngdsFSIRGFSA-SGDIYVDGLRDP----------- 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 134 apanangGGDTFDFNSLSSLDIVRGADSSRGGSGMLGGAIVVNTLEPEDlipvgrDWGAIVKSTYDSEDRsISGSAAAAK 213
Cdd:COG4774 72 -------GQYRRDTFNLERVEVLKGPASVLYGRGSPGGVINLVTKRPTD------EPFTEVTLTYGSDGQ-RRATLDVNG 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 214 KIG-NTSILFQGGYRKGH-ERDNmGDSDSYGRYrtesdPAdfdqhnLLFKLRQEFegghRLGLTAERFRRDLQTDkRDL- 290
Cdd:COG4774 138 PLGdDLAYRLNGMYRDSDsYRDG-VDNDRWGIA-----PS------LTWRLGDRT----RLTLDYEYQDDDRTPD-YGVp 200
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 291 -QGTGRTYMID---NY---DARELNDRDRVSLDYDYEATSSdaffTSARAVLYWQDLKKESGTNGRTAANVA-----YGR 358
Cdd:COG4774 201 aVANGRPVDVDrstFYgqpDDYSDSETDSATLRLEHDFNDN----WTLRNALRYSDYDRDYRNTYPTGGNATgtvtrSAY 276
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 359 TNEIENKTWGFNGTVTKDFEYSNVRHSVKATLEATTSDWTQYSSALCPTPTTCPSLNNQSEVP-----------DVESKT 427
Cdd:COG4774 277 RRDQDNDTLSNQTDLTGKFDTGGVKHTLLAGVEYSREDSDNARYSGGGTAPTVNLYNPVYGAPvtgptlggadnDSRTDT 356
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 428 IGLSIEDKIEFGDtNFALTPGIRFDWFSYDPSTSGGFASNpalakfgtlSDRSDQHVSPKVLATYELTPDVQLYTQLSSA 507
Cdd:COG4774 357 TGLYLQDTISLTD-RWSLLAGLRYDRFDTDYTDRTTGATT---------SSYDDSAFSPRAGLVYKPTPNLSLYASYSTS 426
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 508 FRAPTVDELYSRFynaggnyaqlgNPDLKPETGYGVEMGA--NFDTGDFNGRLAVFHNryhnfieTVTSVNATTGITEFN 585
Cdd:COG4774 427 FNPGGGAPSLSNA-----------GQALDPEKSRQYEVGVkwDLLDGRLSLTAALFRI-------EKTNVRTTDPANPGV 488
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 586 YTNVSSVTISGIEASADKTFNNGINLHAALAYAYGRNEETT------QRLRSVAPFKAIVGGGWSNETFGFdlssTLSAG 659
Cdd:COG4774 489 YVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITKSAnaanvgNRLPNVPRHSASLWTTYDLPLPGL----TLGGG 564
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 660 MltdHLNTPVTNTADTTFDAPGYAIVDLTGWWTPDqvPGLRVQAGVYNIFDQEYFnalavrdvnliSTASQPRDWYSEPG 739
Cdd:COG4774 565 V---RYVGSRYADAANTVKLPSYTRFDAGASYRLN--KNLTLRLNVNNLTDKRYY-----------ASAYGSGYVTPGAP 628
|
730
....*....|.
gi 516735075 740 RTFKVSLTKTF 750
Cdd:COG4774 629 RTVLLSASYRF 639
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
7-750 |
3.87e-33 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 136.18 E-value: 3.87e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 7 RSVLLVCTAATVVLPVSQSFAQSATAatpqataEDSTVLQKIVVKGKRAAPGSVA---------------DTPVS-TEIT 70
Cdd:COG4773 1 AAALLAGSGLAAAAAGALAQAAAAAA-------AEATTLPEVTVTGTAEGTGGYTakssstatkldtplrETPQSvSVVT 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 71 DKKLDEKQVTNIEDLGRSVdPGINASRGDAG----INLRGLSGPRILtiVDGIPIpylsNSSRQGAFAPANangggdtfd 146
Cdd:COG4773 74 RQLIEDQGATTLDDALRNV-PGVTVSSYDGGgrdsFSIRGFSIDNYL--RDGLPL----GGFGGGQPDTAN--------- 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 147 fnsLSSLDIVRGADSSRGGSGMLGGAIVVNTLEPEDlipvgrDWGAIVKSTYDSEDRS-----ISGSAAAAKKIG---Nt 218
Cdd:COG4773 138 ---LERVEVLKGPAGLLYGAGSPGGLVNLVTKRPTA------EPQGEVSLSAGSWDTYratadVGGPLNEDGTLRyrlN- 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 219 silfqGGYRkgherdnmgDSDSYgRYRTESD-----PAdfdqhnLLFKLRqefeGGHRLGLTAERFRRDLQTDKRDLQGT 293
Cdd:COG4773 208 -----AAYE---------DGDSF-RDGVDNRrtliaPS------LDWDLT----DDTTLTLGAEYQDDDSTGDRGFLPLD 262
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 294 GRTYMID---NYDAR-ELNDRDRVSLDYDYEATSSDAFftSARAVLYWQDLKKESGTNGRTAANVA-------YGRTNEI 362
Cdd:COG4773 263 GTLLDLPrstNLGEPwDYYDTETTTLFAELEHRFNDDW--SLRANARYSDSDRDGRSAYAYGAPDAatgtltrYASARDG 340
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 363 ENKTWGFNGTVTKDFEYSNVRHSVKATLEATTSDWTQYSSALCPTPTTCPSLNNQSEVP------DVESKTIGLSIEDKI 436
Cdd:COG4773 341 DSRSDSLDANLNGKFETGGLEHTLLVGADYSRYDSDSDSATAGTINIYNPVYGNLPEPDfdasdtDTTTRQTGLYAQDQI 420
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 437 EFGDtNFALTPGIRFDWFSYDPSTSGGfasnpalakfGTLSDRSDQHVSPKVLATYELTPDVQLYTQlssafraptvdel 516
Cdd:COG4773 421 SLTD-RLSLLLGGRYDWYETDSTNRLG----------GSTTSYDDSAFTPRAGLVYDLTPGLSLYAS------------- 476
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 517 YSRFYNAGGNYAQLGNPdLKPETGYGVEMG--ANFDTGDFNGRLAVFHnryhnfIeTVTSVNATTGITEFNYTNVSSVTI 594
Cdd:COG4773 477 YSESFEPQSGADNNGNP-LDPETGKQYEAGvkGELFDGRLNATLAVFD------I-TQKNVATTDPDNPNFYVQVGEVRS 548
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 595 SGIEASADKTFNNGINLHAALAYAYGRNEETT-----QRLRSVAPFkaiVGGGWSNETFGFDLSS--TLSAGMltdHLNT 667
Cdd:COG4773 549 RGVELELSGELTPGLNLIAGYTYTDAKITKDAdalegKRLTNVPRH---TASLWTTYRFPSGALKglGLGGGV---RYVG 622
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 668 PVTNTADTTFDAPGYAIVDLTGWWTPDqvPGLRVQAGVYNIFDQEYFNALAVRDVNlistasqprdWYSEPgRTFKVSLT 747
Cdd:COG4773 623 ERYGDAANTFTLPSYTLVDAGARYDLG--KNWTLQLNVNNLFDKKYYASSGSRGYV----------YYGAP-RNVRLSLS 689
|
...
gi 516735075 748 KTF 750
Cdd:COG4773 690 YKF 692
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
62-750 |
4.98e-31 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 129.45 E-value: 4.98e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 62 DTPVSTE-ITDKKLDEKQVTNIEDLGRSVDPGINASRGDAG----INLRGLSG-PRILTI-VDGIPIPYLSNSSRQgafA 134
Cdd:TIGR01783 1 DIPQSVSvITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTqfgnITIRGFGLeVDIDNVyLDGVPLLSRGNLAIV---D 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 135 PANangggdtfdfnsLSSLDIVRGADSSRGGSGMLGGAIVVNTLEPEDLiPVGR-DWGAIVKSTYDSEDRsISGSAAAAk 213
Cdd:TIGR01783 78 PAM------------VERVEVLRGPASLLYGGSAPGGVINIVTKRPQDE-PKGSvTFGAGTRSGYRTAFD-LGGPLGAD- 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 214 kiGNTSILFQGGYRKGherDNMGDSDSYGRY----RTESDPADFDQHNLLFKLRQEFEGGHRLGLTAER--FRRDLQTDK 287
Cdd:TIGR01783 143 --GTFRGRLNGARQDG---DSFYDGAGEETRlgatATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGgtSGRDLSSDR 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 288 rdLQGTGRTYMIDNYDARELNDR--DRVSLDYDYEATSSDAFFTSARAVLYWQDLKKESGTNGRTAANVAYGRTNEIEnk 365
Cdd:TIGR01783 218 --YLGTSSNRNYDDREYLSYGLSleYQFNDVWTGKQNLRYSYFDTDSNQVQASGYSSDGGLFGRSLTVVNVKQDRVQI-- 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 366 TWGFNGtvtkDFEYSNVRHSV---KATLEATTSDWTQYSS------ALCPTPTTCPSLNNQSEVPDVESKTIGLSI--ED 434
Cdd:TIGR01783 294 DAGLDG----EFETGPIEHDLllgVSYGQRTTNRFNNTGYpsdniySLTATSSARTDIGDSPKDRALSSTTKALNGvaLQ 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 435 KIEFGDtNFALTPGIRFDWFSYDpstsggfaSNPALAKFGTlsDRSDQHVSPKVLATYELTPDVQLYTQLSSAFRAPtvd 514
Cdd:TIGR01783 370 RILLAD-KWTLTLGGRYDSVDVK--------SNNGVAGSTG--KRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPG--- 435
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 515 ELYSRFYNAGGNyaqlgnpDLKPETGYGVEMGANFDTGD-FNGRLAVFHNRYHNFIeTVTSVNATtgitefNYTNVSSVT 593
Cdd:TIGR01783 436 GYYPKGAGNSGD-------ILEPEKGKNYELGVRYDLGDsLLATAALFRITKDNQL-VQDPVNGT------FSVNAGKTR 501
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 594 ISGIEASADKTFNNGINLHAALAYAYGRNEETTQ------RLRSVAPFKAIVGGGWSNETFGFDLSSTLSAGMLTDHlnt 667
Cdd:TIGR01783 502 NRGVELEARGYLTPGLSLSAGYTYTDAEFTEDTNgdtqgnTVPFVPKHTASLWASYAPPVGDNGLTLGGGVQYTGKA--- 578
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 668 pvTNTADTTFDAPGYAIVDLTGWWTPDQVPGLRVQAGVYNIFDQEYFnalavrdvnlISTASQPRDW--YSEPGRTFKVS 745
Cdd:TIGR01783 579 --YVDGGNTGKVPSYTVVDLSVRYDLTKKKNLTLALNVNNLFDRDYY----------TSGYRWGPSAyiYPGAPRTVGLS 646
|
....*
gi 516735075 746 LTKTF 750
Cdd:TIGR01783 647 VSYDF 651
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
1-712 |
4.06e-25 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 111.02 E-value: 4.06e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 1 MIVRHWRSVLLVCTAATVvlPVSQSFAQSAtaatpqataEDSTvLQKIVVkgkrAAPGS---VADTPVSTE-ITDKKLDE 76
Cdd:PRK13483 1 MKKYLAQVISALCLLPAV--FVTHALAQAA---------PDKT-METVVV----TASGYeqqIRDAPASISvITREDLEN 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 77 KQVTNIEDLGRSVdPGINASRGD--AGINLRGLSGPRILTIVDGipipyLSNSSRQgafAPANANG----GGDTFDFNSL 150
Cdd:PRK13483 65 RFYRDLTDALLDV-PGVVVTGGGdrTDISLRGMGSQYTLILVDG-----KRQSSRE---TRPNSDGpgveQAWTPPLAAI 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 151 SSLDIVRGADSSRGGSGMLGGAIVVNTLEpedlipVGRDWGAIVKSTYDSEDRSISGSAAAAKKIGNTSIL-------FQ 223
Cdd:PRK13483 136 ERIEVIRGPMSSLYGSDAIGGVINIITRK------VPNEWQGEVRLDTTLQENSDSGNVYQANFFVNGPLIkdllglqLY 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 224 GGYRKGHERDNMGdsdSYGRYRTESDPADF-----DQHNLLFKL---RQEFEGghRLGLTAERFRRDLQTDKRDL-QGTG 294
Cdd:PRK13483 210 GQYTQREEDDIEG---GYRDKDARSLTAKLaltpnEDHDIMLEVgtsNQERDS--TVGKTVAPLAPGESCGRRGCpESST 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 295 RTYmidnydarelnDRDRVSLDY--DYEATSSDAFftsaravlywqdLKKESGTNGRTAANVaygrTNEIENKTW----G 368
Cdd:PRK13483 285 TEY-----------ERSTVSLSHtgRWDFGTSDTY------------IQHEEFDNKSREMKI----KNTDFQSSLvaplG 337
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 369 FNGTVTKDFEYSnvrhsvKATLEATTSdwtqyssalcptpttcpslNNQSEVPDVESKTIGLSIEDKIEFGDtNFALTPG 448
Cdd:PRK13483 338 QEHTLTFGAAYN------HQDLTDETS-------------------NQISDLTDISRTQWAVFSEDEWRIAD-DFALTGG 391
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 449 IRFDwfsyDPSTSGGfasnpalakfgtlsdrsdqHVSPKVLATYELTPDVQLYTQLSSAFRAPTVDEL------YSRfyn 522
Cdd:PRK13483 392 LRLD----HDENFGG-------------------HVSPRVYGVWNLAPSWTVKGGVSTGFRAPSLRQTtpdwgqVSR--- 445
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 523 aGGNYaqLGNPDLKPETGYGVEMGANFDTGD-FNGRLAVFHNRYHNFIETVT--SVNATTGITEFN-----YTNVSSVTI 594
Cdd:PRK13483 446 -GGNI--YGNPDLKPETSLNKELGLYYDLGSgLTASLTVFYNEFKDKITRVAcpATQCTDGPNQFGadpttYVNIDEAVT 522
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 595 SGIEASADKTFNNGINLHAalAYAYGRNEETTqrlrsvAPFKaivgGGWSNETFGFDLSSTLSAgMLTDHLNT------- 667
Cdd:PRK13483 523 QGVEASLSYPITSTLSLSG--NYTYTDSEQKS------GAYK----GSPLNQLPKHLFQASLNW-EPTDRLNSwarvnyr 589
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|
gi 516735075 668 -----PVTNTADTTFDAPGYAIVDLTGWWTPDQvpGLRVQAGVYNIFDQE 712
Cdd:PRK13483 590 geesqPTTGPSSSSFIAPSYTFLDLGANYQLTD--NLKLSAGIYNLFDKE 637
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
15-750 |
5.25e-25 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 110.89 E-value: 5.25e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 15 AATVVLPVSQSFAQSATAATPQATAEDSTVLQKIVVKGK---RAAPGsvadtpVSTeITDKKLDEKQVTN-IEDLGRSVd 90
Cdd:PRK13524 8 LALLVNLGIYGVAQAAEAEDAKTDDTPASHEDTIVVTAAeqnLQAPG------VST-ITAEDIRKRPPANdVSEIIRTM- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 91 PGIN----ASRGDAG----INLRGLSGPRILTIVDGIPIPYlSNSSRQG-----------AFAPANAngggdtfdfnsLS 151
Cdd:PRK13524 80 PGVNltgnSTSGQRGnnrqIDIRGMGPENTLILIDGKPVSS-RNSVRYGwrgerdtrgdtNWVPPEM-----------IE 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 152 SLDIVRGADSSRGGSGMLGGaiVVNTLEPedliPVGRDWGAIVKSTYDSEDRSISGSAAaakkigNTSILFQGGyrkghe 231
Cdd:PRK13524 148 RIEVLRGPAAARYGNGAAGG--VVNIITK----KPTGEWHGSWNTYFNAPEHKAEGATK------RTNFSLSGP------ 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 232 rdnMGDSDSYGRY----RTESDPADFDQ-----------------------HNLLFKLRQEFEGGHRLGLTAERFRRD-L 283
Cdd:PRK13524 210 ---LGDELSFRLYgnlnKTQADAWDINQghqsartgsyagtlpagregvinKDINGLLRWDFAPLQSLELEAGYSRQGnL 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 284 QTDkrDLQGTGRTYMIDNYDARELNDRDRVSLDYDYEATSSDAFFTSARAvlywqdlKKESGTNGRTAANVAYGRTNEIE 363
Cdd:PRK13524 287 YAG--DTQNTNSDALVKSLYGKETNRMYRQNYALTHRGGWDNGVSTSNYA-------QYEHTRNSRLPEGLAGGTEGIFN 357
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 364 NKTWGFngtvtKDFEYSNVR-HS---------VKATLEATTsDWTQ------YSSALCPTP-TTCPSLNNQSEVPDVESK 426
Cdd:PRK13524 358 EKATQF-----STIDLDDVMlHSevnlpfdllVNQTLTLGT-EWNQqrmkdpSSNTQALTSgGAIPGVSATGRSPYSKAE 431
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 427 TIGLSIEDKIEFGDTNFaLTPGIRFDwfsyDPSTSGgfaSNpalakfgtlsdrsdqhVSPKVLATYELTPDVQLYTQLSS 506
Cdd:PRK13524 432 IFSLFAEDNMELTDSTM-LTPGLRFD----HHSIVG---NN----------------WSPSLNLSQGLGDDFTLKMGIAR 487
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 507 AFRAPTVDE------LYSR---FYNAGGNYAQL-GNPDLKPETGYGVEMGANFDTGDFNGRLAVFHNRYHNFIE---TVT 573
Cdd:PRK13524 488 AYKAPNLYQtnpnyiLYSKgqgCYASAGNGCYLqGNDDLKAETSVNKEIGLEFKRDGWLAGLTWFRNDYRNKIEagyVPV 567
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 574 SVNATTGITEFNYTNVSSVTISGIEASADKTFNNGINLHAALAYAY-GRNEETTQRLrSVAPFKAIvgggwsNETFGFDL 652
Cdd:PRK13524 568 GTNSVGKTDIYQWENVPKAVVEGLEGTLNVPVSETVNWTNNLTYMLqSKNKTTGDPL-SIIPEYTL------NSTLSWQA 640
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 653 SSTLSA-GMLT----------DHLNTPVTNTAdtTFDAPGYAIVDLTGWWtpDQVPGLRVQAGVYNIFDQEYF---NALA 718
Cdd:PRK13524 641 TEDLSLqSTFTwygkqkpkkyNYKGQPVTGSA--TKEVSPYSIVGLSATY--DVTKNVSLTGGVDNLFDKRLWregNAQT 716
|
810 820 830
....*....|....*....|....*....|..
gi 516735075 719 VRDVNLISTASQprdwYSEPGRTFKVSLTKTF 750
Cdd:PRK13524 717 TGDLIAGAGAYT----YNEPGRTYYMSLNTHF 744
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
91-750 |
2.18e-20 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 96.36 E-value: 2.18e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 91 PGIN----ASRGDAG----INLRGLSGPRILTIVDGIPIPYlSNSSRQGAFAPANANGGGDTFDFNSLSSLDIVRGADSS 162
Cdd:PRK13528 78 PGVNltgnSASGTRGnnrqIDIRGMGPENTLILIDGVPVTS-RNSVRYSWRGERDTRGDTNWVPPEMVERIEVIRGPAAA 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 163 RGGSGMLGGaiVVN--TLEPEDlipvgrDWGAIVkSTYDSEDRSisgsaaaaKKIGNTsilfqggyrkghERDN------ 234
Cdd:PRK13528 157 RYGSGAAGG--VVNiiTKRPTN------DWHGSL-SLYTNQPES--------SKEGAT------------RRANfslsgp 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 235 -MGDSDS---YGRY-RTESDPADFDQ-HN------------------LLFKL--RQ--EFEGGhrlgltaerFRRDLQTD 286
Cdd:PRK13528 208 lAGDALTmrlYGNLnKTDADSWDINSsAGtknaagregvrnkdingvLSWKMtpQQilDFEAG---------YSRQGNIY 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 287 KRDLQGTGRTYMIDN--YDARELND--RDRVSL----DYDYeATSsdafftsaRAVLYWQ---DLKKESGTNGRTAANVA 355
Cdd:PRK13528 279 AGDTQNSNSSAVTESlaKSGKETNRlyRQNYGLthngIWDW-GQS--------RLGFYYEktnNTRMNEGLAGGGEGRIT 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 356 YGR---TNEIENK----------TWGFNGTVTKDFEYSnvrhsvKATLEATTSdwTQYSSALCPTPTTCPSLNNQSevPD 422
Cdd:PRK13528 350 ADQtftTSRLESYrtsgelnvplNWLFEQTLTVGAEWN------RDELNDPSS--TSLTVKDGDIGGISGSAADRS--SK 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 423 VESKTIGLSIEDKIEFGDtNFALTPGIRFDWFSydpstsggfasnpalaKFGTlsdrsdqHVSPKVLATYELTPDVQLYT 502
Cdd:PRK13528 420 NKSEISALYVEDNIEPVP-GTNLIPGLRFDYHS----------------EFGS-------NWSPSLNLSQELGDYFKVKA 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 503 QLSSAFRAPTVDE------LYSR------FYNAGGNYAQlGNPDLKPETGYGVEMGANFDTGDFNGRLAVFHNRYHNFIE 570
Cdd:PRK13528 476 GIARAFKAPNLYQssegylLYSRgngcpkDITSGGCYLV-GNKNLDPEISVNKEIGLEFTVDDYHASVTYFRNDYQNKIV 554
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 571 TVTSVNATT--GITEFNYTNVSSVTISGIEAS-ADKTFNNGINLHAALAYAY-GRNEETTQRLrSVAPfKAIVGG--GWS 644
Cdd:PRK13528 555 AGDDVIGRTasGAYILQWQNGGKAVVEGLEGNlLVPLMKDRLNWNTNATYMItSEQKDTGNPL-SVIP-KYTINStlDWQ 632
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 645 -NETFGFDLSSTLSAGMLTDHLNTpvTNTADTTFDA----PGYAIVDLTGWWTPDQvpGLRVQAGVYNIFDQEYFnalav 719
Cdd:PRK13528 633 iTQALSANVNWTLYGKQKPRTHAE--SRSEETGGLSgkelGAYSLVGVNVNYDINK--NLRLNVGVSNLFDKQIY----- 703
|
730 740 750
....*....|....*....|....*....|.
gi 516735075 720 RDVNLISTasqprdwYSEPGRTFKVSLTKTF 750
Cdd:PRK13528 704 REGEGANT-------YNEPGRAYYAGVTASF 727
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
54-619 |
6.37e-20 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 94.69 E-value: 6.37e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 54 RAAPGSVadtpvsTEITDKKLDEKQVTNIEDLGRSVDP-GINASRGDAGINLRGLSGPRILTIVDGipipyLSNSSRQga 132
Cdd:PRK13484 45 RNAPASV------SVITSEQLQKKPVSDLVDAVKDVEGiSITGGNEKPDISIRGLSGDYTLILVDG-----RRQSGRE-- 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 133 fAPANANGG---GDTFDFNSLSSLDIVRGADSSRGGSGMLGGAIVVNTLepedliPVGRD-W------GAIVKSTYDSED 202
Cdd:PRK13484 112 -SRPNGSGGfeaGFIPPVEAIERIEVIRGPMSSLYGSDAIGGVINIITK------PVNNQtWdgvlglGGIIQEHGKFGN 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 203 rSISGSAAAAKKIGNTSILFQ--GG--YRKGherdnmgDSDSYGRYRTesdpadfDQHNLLFKLRQEFEGGHRLGLTAER 278
Cdd:PRK13484 185 -STTNDFYLSGPLIKDKLGLQlyGGmnYRKE-------DSISQGTPAK-------DNKNITATLQFTPTESQKFVFEYGK 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 279 --FRRDLQTDKRDLQGTGRTYMIDNYDAREL-NDRDRVSLDYDYEATssdafFTSARAVLYWQDLKKESGTNGRTAAN-- 353
Cdd:PRK13484 250 nnQVHTLTPGESLDAWTMRGNLKQPNSKREThNSRSHWVAAWNAQGE-----ILHPEIAVYQEKVIREVKSGKKDKYNhw 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 354 -VAY-GRTNEIENKTwgFNGTVTKdFEYSNVrhsvkatleATTSDWTQYSSalcptpttcpsLNNQSEVPDVESKTIGLS 431
Cdd:PRK13484 325 dLNYeSRKPEITNTI--IDAKVTA-FLPENV---------LTIGGQFQHAE-----------LRDDSATGKKTTETQSVS 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 432 IEDKI-----EFGDT-NFALTPGIRFDWFSYdpstsggfasnpalakFGtlsdrsdQHVSPKVLATYELTPDVQLYTQLS 505
Cdd:PRK13484 382 IKQKAvfienEYAATdSLALTGGLRLDNHEI----------------YG-------SYWNPRLYAVYNLTDNLTLKGGIA 438
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 506 SAFRAPTVDELYSRF--YNAGGNYAQLGNPDLKPETGYGVEMGANFDTGD-FNGRLAVFHNRYHNFIET--VTSVNATTG 580
Cdd:PRK13484 439 KAFRAPSIREVSPGFgtLTQGGASIMYGNRDLKPETSVTEEIGIIYSNDSgFSASATLFNTDFKNKLTSydIGTKDPVTG 518
|
570 580 590
....*....|....*....|....*....|....*....
gi 516735075 581 ITEFNYTNVSSVTISGIEASAdkTFNNGINLHAALAYAY 619
Cdd:PRK13484 519 LNTFIYDNVGEANIRGVELAT--QIPVYDKWHVSANYTF 555
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
48-363 |
8.49e-18 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 84.15 E-value: 8.49e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 48 IVVKGKRAaPGSVADTPVS-TEITDKKLDEKQVTNIEDLGRSVdPGINASR-----GDAGINLRGLSGPRILTIVDGIPI 121
Cdd:COG4206 1 VVVTATRL-EQSKSDLTGSvTVIDAEELERSGATSLADALRRV-PGVQVSSsggpgSAASISIRGLGSNQTLVLIDGVPL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 122 pylsNSSRQGAFAPANangggdtFDFNSLSSLDIVRGADSSRGGSGMLGGAIVVNTLEPEDlipvgrDWGAIVKSTYDSE 201
Cdd:COG4206 79 ----NDPSLGGVDLSL-------IPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKK------GFKGSVSASYGSF 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 202 DRSiSGSAAAAKKIGNTSILFQGGYRKGherDNMGDSDSYGRYRTesdpaDFDQHNLLFKLRQEFEGGHRLGLTAERFRR 281
Cdd:COG4206 142 GTR-RLSASLSGGAGKFSYSLSASYRRS---DGYRYNDPDLRNND-----GYENTSLNARLGYKLGDNGSLSLSGGYSDS 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 282 DLQTdkrdlqgtgrtymidnYDARELNDRDRVSLDYDYEATssdAFFTSARAVLYWQDLKKESGTNGRTAANVAYGRTNE 361
Cdd:COG4206 213 ERGY----------------PGAVGSDRNLRLSLSLEYKLS---DGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGARAG 273
|
..
gi 516735075 362 IE 363
Cdd:COG4206 274 LS 275
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
41-750 |
1.82e-16 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 83.40 E-value: 1.82e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 41 DSTVLQKIVVKGKrAAPGSVADTPVSTE-ITDKKLDEKQVTNIEDLGRSVdPGINAS-RGD--AGINLRGLSGPRILTIV 116
Cdd:PRK10064 26 VDDDGETMVVTAS-AVEQNLKDAPASISvITQEDLQRKPVQNLKDVLKEV-PGVQLTnEGDnrKGVSIRGLDSSYTLILI 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 117 DGIPIpylsnSSRQGAFApananggGDTFDFN-----SLSSLDIVRGADSSRGGSGMLGGaiVVNTLEPedliPVGRDWg 191
Cdd:PRK10064 104 DGKRV-----NSRNAVFR-------HNDFDLNwipvdAIERIEVVRGPMSSLYGSDALGG--VVNIITK----KIGQKW- 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 192 aivkstydsedrsiSGSAAAakkigNTSIlfqggyrkgHERDNMGDSDSYGRYrtESDPadfdqhnllfkLRQEFEGGHR 271
Cdd:PRK10064 165 --------------HGTVTV-----DTTI---------QEHRDRGDTYNGQFF--TSGP-----------LIDGVLGMKA 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 272 LGLTAERFRRDLQtdKRDLQGTGRTYMIDNYDARELN--------DRDRVSLDYDYEATSSDAfftsaravlywQDLKKE 343
Cdd:PRK10064 204 YGSLAKREKDDPQ--NSTTTDTGETPRIEGFTSRDGNvefawtpnQNHDFTAGYGFDRQDRDS-----------DSLDKN 270
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 344 S--------GTNGR----TAANVAYGrtNEIENKTWGFNGTVTKDfeySNvrhSVKATLEATTSDWTQ---YSSALCPTP 408
Cdd:PRK10064 271 RlerqnyslSHNGRwdygNSELKYYG--EKVENKNPGNSSPITSE---SN---SIDGKYTLPLTAINQfltFGGEWRHDK 342
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 409 TTCPSLNNQSEVPDVESKTIGLSIEDKIEFGDtNFALTPGIRFDwfsyDPSTSGgfasnpalakfgtlsdrsdQHVSPKV 488
Cdd:PRK10064 343 LSDAVNLTGGTSSKTSASQYALFVEDEWRIFE-PLALTTGVRMD----DHETYG-------------------DHWSPRA 398
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 489 LATYELTPDVQLYTQLSSAFRAPTVDELYSRFYNA--GGNYAQLGNPDLKPETGYGVEMGANFDTGD-----FNGRLAVF 561
Cdd:PRK10064 399 YLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNscRGACKIVGSPDLKPETSESWELGLYYMGEEgwlegVESSVTVF 478
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 562 HNR------------------YHNFIETVTSVNAtTGITEFNYTNVSSVTISGIEASADKTFNNGINLHAALAYAYGRNE 623
Cdd:PRK10064 479 RNDvddrisisrtsdvnaapgYQNFVGFETNGRG-RRVPVFRYYNVNKARIQGVETELKIPFNDEWKLSLNYTYNDGRDV 557
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 624 ETTQ-RLRSVAPFKAIVGG-GWSN---ETFGFDLSSTLSAGMLTDhlntpvTNTADTtfdAPGYAIVDLTGWWTPDQvpG 698
Cdd:PRK10064 558 SNGEnKPLSDLPFHTANGTlDWKPlalEDWSFYVSGNYTGQKRAD------SATAKT---PGGYTIWNTGAAWQVTK--D 626
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....
gi 516735075 699 LRVQAGVYNIFDqeyfnalavRDVNlistasqpRDWYS--EPGRTFKVSLTKTF 750
Cdd:PRK10064 627 VKLRAGVLNLGD---------KDLS--------RDDYSynEDGRRYFMAVDYRF 663
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
59-172 |
1.38e-15 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 73.07 E-value: 1.38e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 59 SVADTPVSTE-ITDKKLDEKQVTNIEDLGRSVdPGINASRGDAG----INLRGLSGPRILTIVDGIPIPYlsnssrqgaf 133
Cdd:pfam07715 1 DLRDTPGSVSvVTAEDIEDQGATNLADALRGV-PGVSVSSGGGGggssISIRGFGSNRVLVLVDGVPLNS---------- 69
|
90 100 110
....*....|....*....|....*....|....*....
gi 516735075 134 aPANANGGGDTFDFNSLSSLDIVRGADSSRGGSGMLGGA 172
Cdd:pfam07715 70 -GGGGSVDLNSIDPEDIERVEVLKGPASALYGSGAIGGV 107
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
40-711 |
1.19e-12 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 71.34 E-value: 1.19e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 40 EDSTVLQKIVVKGKRAAPGSVADTPVS-TEITDKKLDEKQVTNIEDLGRSVdPGINASRG--DAGINLRGLSGPRILTIV 116
Cdd:PRK13513 29 TNTATPTDTMVVTASGFQQRIQDAPASiSVVTREQLENKAYRDVTDALKDV-PGVVVTGGgsTSDISIRGMAAKYTLILV 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 117 DGIPIPylSNSSRqgafaPANANGG---GDTFDFNSLSSLDIVRGADSSRGGSGMLGGAIVVNTLEpedlipVGRDWGAI 193
Cdd:PRK13513 108 DGKRVD--TRSTR-----PNSDGSGieqGWLPPLAAIERIEVVRGPMSSLYGSDAMGGVINIITRK------VQKEWHGS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 194 VKSTYDSEDRSISG-----SAAAAKKI--GNTSILFQGGYRKgheRDNMGDSDSYGRYRTESDPADF----DQHNLLfkl 262
Cdd:PRK13513 175 LRADATLQEDSKSGdifqtNAYASGPLidGLLGLKVSGLLSH---RSEDKIIDGYNEQRMRNGTATFsltpDDNNEF--- 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 263 rqEFEGGhrlgltaerfrRDLQTdkRDlQGTGRTYMIDNYDARELNDRDRVSLDYD--YEATSSDAFFTsaravlywqdl 340
Cdd:PRK13513 249 --DFEIG-----------RYVQD--RN-STPGRTLALNGTNSDTQYDRNNYAITHNgyYDFGNSTSYIQ----------- 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 341 KKESGTNGRTAANVaygrTNEIENKTWGFNG----TVTKDFEYSNVR-HSVKATLEATTSDWTQYSSALCptpttcpsln 415
Cdd:PRK13513 302 RDETRNPSRQMKSV----DTIFNTQTSFLLDdhtlSLGGQYRYEELYdKGNQLPSASDLNKLTRWSWALF---------- 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 416 nqsevpdvesktiglsIEDKIEFGDtNFALTPGIRFDwfsYDPStsggfasnpalakFGTlsdrsdqHVSPKVLATYELT 495
Cdd:PRK13513 368 ----------------AEDEWQMTN-DFALTGGIRMD---QDQN-------------YGT-------HWTPRLYGVWHLA 407
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 496 PDVQLYTQLSSAFRAPTVDELYSRFYNA--GGNYAQ--LGNPDLKPETGYGVEMGANFDTGD-FNGRLAVFHNRYHNFIE 570
Cdd:PRK13513 408 DQWTLKGGVSTGYRSPDLRQATDNWGQLtgGGGLPAliLGNSDLKPEKSISQEIGILWDNQEnLNASVTLFNTDFKDKIT 487
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 571 TV-----TSVNATTGITEFNY------TNVSSVTISGIEASADKTFNNGINLHAalAYAYGRNEETTQRLRSVAPFKaiV 639
Cdd:PRK13513 488 EVrncdtTNTDGQCVFNGINYdfisdrINVDKANMRGVEATFNWDINQAWSLAT--NYTFTQSEQKSGAFAGQPLNQ--M 563
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 516735075 640 GGGWSNETFGFDLSSTLSA-------GMLTDHLNTpvTNTADTTfdaPGYAIVDLTGWWTPDQvpGLRVQAGVYNIFDQ 711
Cdd:PRK13513 564 PKHMANATLNWQTTEDFATwirinyrGKTSEYLNR--TSMGSGT---PSYTFVDLGASYQLTK--ELRLMGGVYNLLDK 635
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
445-713 |
1.80e-10 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 64.24 E-value: 1.80e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 445 LTPGIRFDWFSYDPSTSGGFASnpALAKFG--TL--SDRSD------QHVSPKVLATYELTPDVQLYTQLSSAFRAPTVD 514
Cdd:PRK10641 342 TTPGTGYVPDGYDQRNTGIYLT--GQQQIGdvTLegAARSDdnsqfgWHGTWQTSAGWEFIDGYRFIASYGTAFKAPNLG 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 515 ELYSRFynaggnyaqlGNPDLKPETGYGVEMGANFDTGDFNGRLAVFHNRYHNFIetvtsvnaTTGITEFNYTNVSSVTI 594
Cdd:PRK10641 420 QLYGFY----------GNPNLKPEESKQWEGGFEGLTGPVNWRLSGYRNDIDNLI--------DYDDHTLKYYNVGKATI 481
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 595 SGIEASAdkTFNNGInLHAALAYAY--GRNEETTQRL--RSVAPFKAIVGGGWsnetfgFDLSSTLSAGMLTDHLNTPVT 670
Cdd:PRK10641 482 KGVEWTG--NFDTGP-LTHQVTLDYvdPRNAITDEPLarRAKQQVKYQLDWQL------YDFDWGVTYQYLGTRYDKDYS 552
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 516735075 671 NTADTTFDAPGYAIVDLTGWWtpdqvP---GLRVQAGVYNIFDQEY 713
Cdd:PRK10641 553 TYPYQTVKLGGVSLWDLAVSY-----PvtsHLTVRGKIANLFDKDY 593
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
69-624 |
6.64e-09 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 59.27 E-value: 6.64e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 69 ITDKKLDEKQVTNIEDLGRSVDP-GINASRGDAG---INLRGLSGPRILTIVDGIpipylsnssRQGAFAPANANG---- 140
Cdd:PRK13486 49 ISQEELQSSQYHDLAEALRSVEGvDVESGTGKTGgleISIRGMPASYTLILIDGV---------RQGGSSDVTPNGfsam 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 141 -GGDTFDFNSLSSLDIVRGADSSRGGSGMLGGAIVVNTLEPEDlipvgrDWGAIVKSTYDSEDRSISGSAAAAK------ 213
Cdd:PRK13486 120 nTGFMPPLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKNAD------KWLSSVNAGLNLQESNKWGNSSQFNfwssgp 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 214 -KIGNTSILFQGG--YRKGHERDNMGD-SDSYGRYRTESDpadfdQHNLLFKLRQEFEGGHRLGLTAERFRRdlQTDKRD 289
Cdd:PRK13486 194 lVDDSVSLQVRGStqQRQGSSVTSLSDtAATRIPYPTESQ-----NYNLGARLDWKASEQDVLWFDMDTTRQ--RYDNRD 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 290 LQGTGRTymiDNYDARELNDRDRVSLDYDYEATssdafFTSARAVLYWQdlkkESGTNGRTAANVAygrtneIENKTWGF 369
Cdd:PRK13486 267 GQLGSLT---GGYDRTLRYERNKISAGYDHTFT-----FGTWKSYLNWN----ETENKGRELVRSV------LKRDKWGL 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 370 NGTVTKDFEYSNVRHSVKATLEATTSDWT---QYSSALCPTPTTCPSLNNQsevpdVESKTIGLSIEDKIEFGDTnFALT 446
Cdd:PRK13486 329 AGQPRELKESNLILNSLLLTPLGESHLVTvggEFQSSSMKDGVVLASTGET-----FRQKSWSVFAEDEWHLTDA-LALT 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 447 PGIRFDWFSydpstsggfasnpalaKFGTlsdrsdqHVSPKVLATYELTPDVQLYTQLSSAFRAPTVDELYSRF--YNAG 524
Cdd:PRK13486 403 AGSRYEHHE----------------QFGG-------HFSPRAYLVWDVADAWTLKGGVTTGYKAPRMGQLHKGIsgVSGQ 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 525 GNYAQLGNPDLKPETGYGVEMGANFDTGD-FNGRLAVFHNRYHNFIETVTSVNATTgitefNYTNVSSVTISGIE-ASAD 602
Cdd:PRK13486 460 GKTNLLGNPDLKPEESVSYEAGVYYDNPAgLNANVTGFMTDFSNKIVSYSINDNTN-----SYVNSGKARLHGVEfAGTL 534
|
570 580
....*....|....*....|..
gi 516735075 603 KTFNNGINLhaALAYAYGRNEE 624
Cdd:PRK13486 535 PLWSEDVTL--SLNYTWTRSEQ 554
|
|
| OMP_b-brl_3 |
pfam14905 |
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB ... |
531-747 |
1.85e-06 |
|
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.
Pssm-ID: 434300 [Multi-domain] Cd Length: 407 Bit Score: 50.73 E-value: 1.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 531 GNPDLKPETGYGVEMGANFDTgdfNGRLAVFHNRYHNFIETVTSVNATTGITEFNYTNVSSVTISGIEASADKTFNNGIN 610
Cdd:pfam14905 208 GNPNLKPEYTNSFELGYTYKW---KLSLSLSYRYTNDVIQQTFITDDNDNVTYTTYENLGKSNSYGLELSASFNPTKWWS 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 611 LHAALAYAYGRNEettqrlrsvapFKAIVGGGWSNETFGFDLSSTLSA-----GMLTDHLNTPVTNtadTTFDAPGYAIV 685
Cdd:pfam14905 285 LNGNLNGYYNKYK-----------IDGSLNSDFSNFGFNWNLNNTFTLpkgwsLQLNGNYRSPRVT---GQGKIKPFYSL 350
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 516735075 686 DLtgwwtpdqvpGLR---------VQAGVYNIFDQEYFNALAVRDVNLISTASQPRDWysepgRTFKVSLT 747
Cdd:pfam14905 351 DL----------GLSksflkkkltLSLNVNDIFNTRKFRSTTNYDNGFIQSYNNKWDS-----RSVRLSLS 406
|
|
| TonB-Xanth-Caul |
TIGR01782 |
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ... |
439-750 |
7.77e-06 |
|
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 49.64 E-value: 7.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 439 GDTNFALTPGIRFDwfsYDPSTSGGFASNPALAKFGTL-----SDRSDQHVSPKVLATYELTPDVQLYTQLSSAFRAPTV 513
Cdd:TIGR01782 518 TGLRLRGNVGVRYE---RTDQTSDGWQSQPAANGTGSVlvpvsADRDYTDVLPSLNLAYDLTDDLVLRFAASKTITRPDF 594
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 514 DELYSRFY-----NAGGNYAQLGNPDLKPETGYGVEMGAN--FDTGDFNGrLAVFHNRYHNFIETVTSVNATTGITEFNY 586
Cdd:TIGR01782 595 GDLAANTSlsddgTGGTVTVSGGNPDLKPYESDNLDLSLEwyFGPGGLLS-AAVFYKDIKNFIVTTTSTETNDGGGGLVV 673
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 587 TNVSSVT---------ISGIEASADKTFN------NGINLHAALAYAYGR-NEETTQRLRSVAPF----KAIVG--GGWS 644
Cdd:TIGR01782 674 AGVLVSRpvnggkagkIRGVELGYQQTFDflpgplSGFGVQANYTYVDSEaDPSVDGVQRRKLPLpglsKNTANatLYYE 753
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 645 NETFGFDLSSTLSAGMLTDhLNTPVTNTADTTFDAPGYaiVDLT-GWWTPDQvpgLRVQAGVYNIFDQEYFNALAVRdvn 723
Cdd:TIGR01782 754 KGGFSARLSYNYRSDYLLD-VGGSNINRLDRYVDPRGQ--LDLSaSYQVSDH---LSLGLQASNLTNEPSRWYTGGK--- 824
|
330 340
....*....|....*....|....*..
gi 516735075 724 listaSQPRDWYsEPGRTFKVSLTKTF 750
Cdd:TIGR01782 825 -----QRPREYV-ETGRTYMLGLRYKF 845
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
359-717 |
2.82e-05 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 47.49 E-value: 2.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 359 TNEI-ENKTwgfngTVTKDFEYSNVRHSVKATLEATTSDWTQYSSAlcptPTTCPSLNNQSEVPDV-------------- 423
Cdd:PRK09840 372 SNKIlTNQT-----NLTSTFYTGSIGHDVSTGVEFTRETQTNYGVN----PVTLPAVNLYHPDSSIhpggltrnganang 442
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 424 ESKTIGLSIEDKIEFGDtNFALTPGIRFDWF--SYDPSTSGGFASN-----PALAKFGTLSDR-----SDQHVSPKVLAT 491
Cdd:PRK09840 443 QTDTFAIYAFDTLQLTR-DWELNGGIRLDNYhtEYDSATACGGSGRgaitcPAGVAKGSPVTTvdtakSGNLVNWKAGAL 521
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 492 YELTPDVQLYTQLSSAFRAPTVDElYSRFYNAGGNYAQlgNPDLKPETGYGVEMGANFDTGDfnGRL----AVFHNRYHN 567
Cdd:PRK09840 522 YKLTENGNVYINYAVSQQPPGGSN-FALAQSGSGNSAN--RTDFKPQKANTSEIGTKWQVLD--KRLlltaALFRTDIEN 596
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 568 FIETvtsvNATTGITEFNYTNVSSVTISGI-EASADKTFNNGINL-HAALAYAYGRNEETTQRLrSVAPFKAIVggGWSN 645
Cdd:PRK09840 597 EVEQ----NDDGTYSQYGKKRVEGYELSVAgNITPAWQVIAGYTQqKATVKNGKDVAQDGSSSL-PYTPEHAFT--LWSQ 669
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 516735075 646 ETFGFDLssTLSAGM-LTDHLNTPvtntADTTFDAPGYAivdlTGWWTPDQVPGLRV------QAGVYNIFDQEYFNAL 717
Cdd:PRK09840 670 YQATDDL--SVGGGArYIGSMHRG----SDGAVGTPAFT----EGYWVADAKLGYRVnrnldlQLNVYNLFDTDYVASI 738
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
377-617 |
1.20e-03 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 42.20 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 377 FEYSNVRHSVKATLEATTSDWTQYS--SALCPTPTTCPSLNNQSEVPDVESKTI------GLSIEDKIEFgdTNFALTPG 448
Cdd:PRK14049 373 FDTGAFEHTLLAGVDYTKLRFRALNgrGVSPPLDTKNPTQGRPVAAIDFSTRTVqdqwqlGTYLQDQIRY--DAWTLTAG 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 449 IRFDWFSYDpSTSGGFASNPAlakfgTLSDRSDQHVSPKVLATYELTPDVQLYTQLSSAFrAPtvdelysrfyNAGGNYA 528
Cdd:PRK14049 451 GRYDWVSTD-TDTTDLATDSL-----TTVSQKDKEFSGRIGLTYETDFGLAPYISYSTAF-SP----------NAGFNRA 513
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516735075 529 QlGNPdLKPETGYGVEMGANFDTGDFNGRL--AVFH-NRYHNFIETVTSVNATTGITEFNYTNVSSvtiSGIEASADKTF 605
Cdd:PRK14049 514 T-NQP-FKPTESEQQEVGVKYLLPNSNTLItaALFNiDQTNGLYYEVVFLAAGPTNIQVQRGKLRS---RGFELEANTSL 588
|
250
....*....|..
gi 516735075 606 NNGINLHAALAY 617
Cdd:PRK14049 589 DNGLSLIASYTY 600
|
|
| |
