|
Name |
Accession |
Description |
Interval |
E-value |
| flgG |
PRK12692 |
flagellar basal body rod protein FlgG; Reviewed |
1-262 |
2.37e-152 |
|
flagellar basal body rod protein FlgG; Reviewed
Pssm-ID: 139158 [Multi-domain] Cd Length: 262 Bit Score: 425.03 E-value: 2.37e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 1 MKALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLYQTERAQGVPNRSNQAIVPEGAIIGLGVQTSAVRNL 80
Cdd:PRK12692 1 MRALAIAATGMSAQQLNLEVIANNIANLNTTGFKGARAEFTDLLYQAERQQGVPNQAGQEAVPEGAMLGLGVRAAAIRNL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 81 HIQGSLVNTGNDYDLALVGRGWFQIETPDGETVYTRSGAFNTNATGQLVTIDGYTVVPGVTVPQDATEIVFTSSGQVMVR 160
Cdd:PRK12692 81 HRQGSLAQTGNQLDLAVNGRGYFQVTSPNGEIQYTRAGSFNKNAAGQLVTMEGYAVDPAILIPQNTTQVTINESGQVFAK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 161 IGNDTELQEVGQLTIANFVNEAGLEPMGENLFRQTPASGDPIVGTPADPGFAQIKQNYLESSNVDPVKEITDLISAQRAY 240
Cdd:PRK12692 161 IDGQVAPQNLGQLTLANFANESGLEPLGNGLYRETPASGAPVVGNPGDVGFGKIQQGYLEGSNVDPVKEITSLITAQRAF 240
|
250 260
....*....|....*....|..
gi 516773447 241 EMNSKIIQAADEMAATVSKNLR 262
Cdd:PRK12692 241 EMNSKVIQAADEMAGTVSKGIR 262
|
|
| flgG_G_neg |
TIGR02488 |
flagellar basal-body rod protein FlgG, Gram-negative bacteria; This family consists of the ... |
3-261 |
3.24e-147 |
|
flagellar basal-body rod protein FlgG, Gram-negative bacteria; This family consists of the FlgG protein of the flagellar apparatus in the Proteobacteria and spirochetes. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 131541 [Multi-domain] Cd Length: 259 Bit Score: 411.75 E-value: 3.24e-147
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 3 ALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLYQTERAQGVPNRSNQAIVPEGAIIGLGVQTSAVRNLHI 82
Cdd:TIGR02488 1 ALWTAATGMNAQQTNMDVISNNLANVNTTGFKKDRAEFEDLLYQTERQPGAQSSEQQTILPVGVQVGLGVRVVATQKLFT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 83 QGSLVNTGNDYDLALVGRGWFQIETPDGETVYTRSGAFNTNATGQLVTIDGYTVVPGVTVPQDATEIVFTSSGQVMVRIG 162
Cdd:TIGR02488 81 QGSLQNTGNDLDLAIEGEGFFQVLMPDGTTAYTRDGAFKINAEGQLVTSNGYPLQPEITIPENATSITVGSDGEVSVRQG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 163 NDTELQEVGQLTIANFVNEAGLEPMGENLFRQTPASGDPIVGTPADPGFAQIKQNYLESSNVDPVKEITDLISAQRAYEM 242
Cdd:TIGR02488 161 GQTEPQEVGQITLATFINPAGLEAVGENLFRETPASGPPQIGTPGLDGFGKLRQGFLEASNVNVVQEMVDMITAQRAYEM 240
|
250
....*....|....*....
gi 516773447 243 NSKIIQAADEMAATVSKNL 261
Cdd:TIGR02488 241 NSKAIQASDQMLQTVSQLL 259
|
|
| FlgG |
COG4786 |
Flagellar basal body rod protein FlgG [Cell motility]; |
4-262 |
1.01e-124 |
|
Flagellar basal body rod protein FlgG [Cell motility];
Pssm-ID: 443816 [Multi-domain] Cd Length: 260 Bit Score: 354.89 E-value: 1.01e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 4 LSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLYQTERAQGVPNrSNQAIVPEGAIIGLGVQTSAVRNLHIQ 83
Cdd:COG4786 1 LYTAASGMLAQQTRLDVISNNLANVNTTGFKRDRAVFEDLLYQLIRRPGAPS-SQGTQTPVGLQLGTGVRVAATQTDFTQ 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 84 GSLVNTGNDYDLALVGRGWFQIETPDGETVYTRSGAFNTNATGQLVTIDGYTVVP---GVTVPQDATEIVFTSSGQVMVR 160
Cdd:COG4786 80 GSLQQTGNPLDLAIEGDGFFQVQTPDGETAYTRDGSFQLDADGQLVTSDGYPVLPengPITIPEDATSITISEDGTVSVT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 161 IGnDTELQEVGQLTIANFVNEAGLEPMGENLFRQTPASGDPIVGTPADPGFAQIKQNYLESSNVDPVKEITDLISAQRAY 240
Cdd:COG4786 160 LA-DGDGQQVGQLGLVDFANPAGLEKVGDNLFRETAASGAPIVGTPGEDGLGTLRQGYLEGSNVDVVEEMVDMIEAQRAY 238
|
250 260
....*....|....*....|..
gi 516773447 241 EMNSKIIQAADEMAATVSKNLR 262
Cdd:COG4786 239 EANSKVIQTADEMLGKANNLRG 260
|
|
| flgG |
PRK12693 |
flagellar basal body rod protein FlgG; Provisional |
1-261 |
2.92e-114 |
|
flagellar basal body rod protein FlgG; Provisional
Pssm-ID: 183687 [Multi-domain] Cd Length: 261 Bit Score: 328.36 E-value: 2.92e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 1 MKALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLYQTERAQGVPNrSNQAIVPEGAIIGLGVQTSAVRNL 80
Cdd:PRK12693 2 IRALWIAKTGLDAQQTNIDVISNNLANVNTTGFKKSRAVFEDLLYQTIRQPGAQS-SQNTTLPSGLQVGTGVRPVATQKI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 81 HIQGSLVNTGNDYDLALVGRGWFQIETPDGETVYTRSGAFNTNATGQLVTIDGYTVVPGVTVPQDATEIVFTSSGQVMVR 160
Cdd:PRK12693 81 FTQGNLQQTGNSLDVAIEGQGFFQVQLPDGTIAYTRDGSFKLDQDGQLVTSGGYPLQPEITIPENATSITIGTDGTVSVT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 161 IGNDTELQEVGQLTIANFVNEAGLEPMGENLFRQTPASGDPIVGTPADPGFAQIKQNYLESSNVDPVKEITDLISAQRAY 240
Cdd:PRK12693 161 QAGQAAPQVVGQITLTDFINPAGLESIGENLYLETAASGAPIEGTPGLNGLGTLRQGFLETSNVNVVEELVNMITGQRAY 240
|
250 260
....*....|....*....|.
gi 516773447 241 EMNSKIIQAADEMAATVSKNL 261
Cdd:PRK12693 241 EMNSKAISTADQMLQYVNQLL 261
|
|
| flgG |
PRK12816 |
flagellar basal body rod protein FlgG; Reviewed |
1-257 |
1.49e-91 |
|
flagellar basal body rod protein FlgG; Reviewed
Pssm-ID: 183766 [Multi-domain] Cd Length: 264 Bit Score: 271.29 E-value: 1.49e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 1 MKALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLYQTERAQGVPNRSNqAIVPEGAIIGLGVQTSAVRNL 80
Cdd:PRK12816 2 MRSLWTAASGMNAQQFNIDTIANNLANVNTTGFKKIRAEFEDLIYQTQRRAGTPATED-TVTPLGVQVGHGVKVAATQRL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 81 HIQGSLVNTGNDYDLALVGRGWFQIETPDGETVYTRSGAFNTNATGQLVTIDGYTVVPGVTVPQDATE--IVFTSSGQVM 158
Cdd:PRK12816 81 FEQGSLQATGNKLDVAIEGEGFFKILMPDGTYAYTRDGSFKIDANGQLVTSNGYRLLPEIIFPENYILnsITISEEGIVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 159 VRIGNDTELQEVGQLTIANFVNEAGLEPMGENLFRQTPASGDPIVGTPADPGFAQIKQNYLESSNVDPVKEITDLISAQR 238
Cdd:PRK12816 161 VKVGEDNDPIELGQIELYRFVNPAGLSAIGKNLFKETIASGQEIPGIPGSEGFGRVLQGFLEMSNVSIVEEMVTMIVAQR 240
|
250
....*....|....*....
gi 516773447 239 AYEMNSKIIQAADEMAATV 257
Cdd:PRK12816 241 AYEINSKAIQTSDNMLGTA 259
|
|
| FlgEFG_subfam |
TIGR03506 |
flagellar hook-basal body protein; This model encompasses three closely related flagellar ... |
2-243 |
1.79e-91 |
|
flagellar hook-basal body protein; This model encompasses three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. The names have often been mis-assigned, however. Three equivalog models, TIGR02489, TIGR02490 and TIGR02488, respectively, separate the individual forms into three genome-context consistent groups. The major differences between these genes are architectural, with variable central sections between relatively conserved N- and C-terminal domains. More distantly related are two other flagellar apparatus familis, FlgC (TIGR01395) which consists of little else but the N-and C-terminal domains and FlgK (TIGR02492) with a substantial but different central domain.
Pssm-ID: 274616 [Multi-domain] Cd Length: 231 Bit Score: 269.51 E-value: 1.79e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 2 KALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLYQTERAQGvpnrsnqaivpegaIIGLGVQTSAVRNLH 81
Cdd:TIGR03506 1 MALYTALSGLNAQSSALDVIANNIANANTTGFKRSRAEFQDLLSQSVSGSG--------------QVGGGVRTSGVATDF 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 82 IQGSLVNTGNDYDLALVGRGWFQIETPDGETVYTRSGAFNTNATGQLVTIDGYTVVPG----VTVPQDATEIVFTSSGQV 157
Cdd:TIGR03506 67 SQGSLQSTGNSLDLAISGDGFFVVQTPDGSEAYTRAGSFKLDADGYLVTSDGYPLLDWgggpITLPPDAGSVSIGEDGTV 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 158 MVRIGNDTElQEVGQLTIANFVNEAGLEPMGENLFRQTPASGDPIVGTPADPGFAQIKQNYLESSNVDPVKEITDLISAQ 237
Cdd:TIGR03506 147 SATYSNGQT-VELGQIALANFPNPDGLRKEGGNLYSATPGSGAALVGAPGTGGFGTLVSGALEGSNVDLAEELVNMISAQ 225
|
....*.
gi 516773447 238 RAYEMN 243
Cdd:TIGR03506 226 RAYQAN 231
|
|
| flgG |
PRK12636 |
flagellar basal body rod protein FlgG; Provisional |
10-253 |
4.26e-67 |
|
flagellar basal body rod protein FlgG; Provisional
Pssm-ID: 183640 [Multi-domain] Cd Length: 263 Bit Score: 208.84 E-value: 4.26e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 10 GMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLYQTERAQGVPNRSNQAIVPEGaiIGLGVQTSAVRNLHIQGSLVNT 89
Cdd:PRK12636 11 GMKNFQTKLDVIGNNIANVNTYGFKKSRVTFKDMVSQTISGASGPTANRGGVNSKQ--VGLGSQLGAIDTIHTQGSLQTT 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 90 GNDYDLALVGRGWFQIETPDgETVYTRSGAFNTNATGQLVTIDGYTVV-PG---VTVPQDATEIVFTSSGQVMVrIGNDT 165
Cdd:PRK12636 89 GRPLDLAISGDGFFRVGDGD-NTAYTRAGNFYLDNEGNIVNADGLYLLgMNggrIQIPTDAQSFSIGADGTVSY-VDAGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 166 ELQEVGQLTIANFVNEAGLEPMGENLFRQTPASGDPIVGTPADPGFAQIKQNYLESSNVDPVKEITDLISAQRAYEMNSK 245
Cdd:PRK12636 167 ELQTAGQIGLATFANPDGLEKAGDNLYRETLNSGTPSAVVPGEGGTGKIVSGALEMSNVDLAEEFTEMIVAQRGFQANTR 246
|
....*...
gi 516773447 246 IIQAADEM 253
Cdd:PRK12636 247 IITTSDEI 254
|
|
| FlgE |
COG1749 |
Flagellar hook protein FlgE [Cell motility]; |
1-262 |
2.74e-61 |
|
Flagellar hook protein FlgE [Cell motility];
Pssm-ID: 441355 [Multi-domain] Cd Length: 414 Bit Score: 198.47 E-value: 2.74e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 1 MKALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLYQTERAQGVPNrsnqaivpegaiIGLGVQTSAVRNL 80
Cdd:COG1749 2 MMSFNTGVSGLNAASTALDVIGNNIANSNTVGFKSSRAEFADLVAQSLSGANPTQ------------VGGGVRVASVAQI 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 81 HIQGSLVNTGNDYDLALVGRGWFQIETPDGETVYTRSGAFNTNATGQLVTIDGYTV------------------------ 136
Cdd:COG1749 70 FTQGSLQSTGNALDLAISGNGFFVVSDSGGQTYYTRAGSFSLDKDGYLVNSSGLYLqgypadadgtipdtggglepiqip 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 137 -----------------------------------------------------------------------------VPG 139
Cdd:COG1749 150 tgqlpakattkvtlggnlpadatvptapfdptdpttynfstsvtvydslgnshtltlyftktgantwtvyvtvdgadVTG 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 140 VTVPQDATEIVFTSSGQV-----------------------------MVRIGNDTEL----------------------- 167
Cdd:COG1749 230 GTGATGTGTLTFDSNGKLtsptsggpgtltltvngaapqtitldlsgLTQYASSFSVtsltqdgyaagtltgvsidddgv 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 168 ----------QEVGQLTIANFVNEAGLEPMGENLFRQTPASGDPIVGTPADPGFAQIKQNYLESSNVDPVKEITDLISAQ 237
Cdd:COG1749 310 vtatysngqtRPLGQIALATFANPQGLQKLGGNLWAETANSGEPLLGTAGTGGLGSIQSGALESSNVDLAEELVNMIVAQ 389
|
410 420
....*....|....*....|....*
gi 516773447 238 RAYEMNSKIIQAADEMAATVSkNLR 262
Cdd:COG1749 390 RAYQANAKVITTSDEMLQTLV-NLK 413
|
|
| flgG |
PRK12817 |
flagellar basal body rod protein FlgG; Reviewed |
7-262 |
3.25e-54 |
|
flagellar basal body rod protein FlgG; Reviewed
Pssm-ID: 183767 [Multi-domain] Cd Length: 260 Bit Score: 175.65 E-value: 3.25e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 7 AATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLYQTERAQGVPNRSNQAIvpegaIIGLGVQTSAVRNLHIQGSL 86
Cdd:PRK12817 8 SKSGMNAQQEKLDSISNNLANVNTTGYKREDVSFSDLVYETLDRKGYPTNDKPEI-----ITGTGVKATNWIRDNQQGNL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 87 VNTGNDYDLALVGRGWFQIETPDGETVYTRSGAFNTNATGQLVTIDG------YTVVPGV---TVPQDATEIVFTSSGQV 157
Cdd:PRK12817 83 LTTGNKTDLAIDGEGFFRVIMADGTYAYTRAGNFNIDSNGMLVDDNGnrleiqLEAGVGInnrNTGFDSNNFTVDEDGGI 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 158 MVRiGNDTELQEVGQLTIANFVNEAGLEPMGENLFrqTPASGDPIVGTPAdpgfAQIKQNYLESSNVDPVKEITDLISAQ 237
Cdd:PRK12817 163 SVK-NVDGQNKKVGKINIYNAVGNDAFISIGDNLY--VPSDGVQVFLNND----VDILQGYLENSNVDLGKEMTDMIITQ 235
|
250 260
....*....|....*....|....*
gi 516773447 238 RAYEMNSKIIQAADEMAATVSkNLR 262
Cdd:PRK12817 236 RAFQLSSKGIKTADEMWGIIN-NMR 259
|
|
| flgE |
PRK05682 |
flagellar hook protein FlgE; Validated |
2-257 |
2.42e-47 |
|
flagellar hook protein FlgE; Validated
Pssm-ID: 235557 [Multi-domain] Cd Length: 407 Bit Score: 161.93 E-value: 2.42e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 2 KALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLYQTERaqgvpNRSNQaivpegaiIGLGVQTSAVRNLH 81
Cdd:PRK05682 1 MSFNTAVSGLNAASNRLDVIGNNIANANTTGFKSSRAEFADLYANSAG-----TNPTQ--------VGSGVKVAGVAQQF 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 82 IQGSLVNTGNDYDLALVGRGWFqIETPDGETVYTRSGAFNTNATGQLVTIDGYTV------------------------- 136
Cdd:PRK05682 68 SQGSITSTGNSLDLAISGNGFF-VVSNGGNGFYTRAGAFKLDKNGYLVNAAGYYLqgypadadggtpptvgaglvplnip 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 137 ------------------------------------------------------------------------VPGVTVPQ 144
Cdd:PRK05682 147 ttalapkattsgtfqgnlpstaafdptdpdtynhstsltvydslgnshtldvyfvktgdntwevyvyddgkpVSTTATGT 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 145 DATEIVFTSSGQVM-------------------------------------------------------VRIGND----- 164
Cdd:PRK05682 227 GTTTLTFDSNGALTtttspttfnitggatngadggqtitldlsgstqyasgftvsattqdgyapgtltgYSIDDDgtvta 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 165 ----TELQEVGQLTIANFVNEAGLEPMGENLFRQTPASGDPIVGTPADPGFAQIKQNYLESSNVDPVKEITDLISAQRAY 240
Cdd:PRK05682 307 vysnGQTKPLGQIALANFANPDGLTKVGGNVWSATAASGVALIGTAGSGGFGTIQSGALESSNVDLSTELVNMIVAQRNY 386
|
410
....*....|....*..
gi 516773447 241 EMNSKIIQAADEMAATV 257
Cdd:PRK05682 387 QANAKTIKTQDQLLQTL 403
|
|
| FlgF |
COG4787 |
Flagellar basal body rod protein FlgF [Cell motility]; |
2-262 |
2.56e-47 |
|
Flagellar basal body rod protein FlgF [Cell motility];
Pssm-ID: 443817 [Multi-domain] Cd Length: 246 Bit Score: 157.60 E-value: 2.56e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 2 KALSIAATGMNAQQLNLEVIANNIANINTTGYkraRAEFSDLLYQTERAQGVPNRSNqaivpegaiiglgVQTSAVRNLH 81
Cdd:COG4787 3 RLIYTAMSGAKQTLEAQAVTANNLANASTTGF---RADLEAARAVPVQGEGLPTRAF-------------AVTETPGTDF 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 82 IQGSLVNTGNDYDLALVGRGWFQIETPDGETVYTRSGAFNTNATGQLVTIDGYTVV----PgVTVPQDAtEIVFTSSGQV 157
Cdd:COG4787 67 SPGPLQQTGRPLDVAIQGDGWLAVQAPDGSEAYTRAGDLQVDANGQLVTGNGLPVLgdggP-ITIPPGA-KVTIGADGTI 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 158 MVRIGND--TELQEVGQLTIANfVNEAGLEPMGENLFRqtPASGDPIvgtPADPGfAQIKQNYLESSNVDPVKEITDLIS 235
Cdd:COG4787 145 SIVPAGGppNALAEVGRLKLVN-PDPAQLVKGDDGLFR--LKDGGPL---PADPN-VRVVSGALEGSNVNAVEEMVSMIS 217
|
250 260
....*....|....*....|....*..
gi 516773447 236 AQRAYEMNSKIIQAADEMAATVSKNLR 262
Cdd:COG4787 218 LARQFEMQMKMMKTADENDQAANQLLR 244
|
|
| flgF |
PRK12690 |
flagellar hook-basal body complex protein; |
18-262 |
6.60e-43 |
|
flagellar hook-basal body complex protein;
Pssm-ID: 183685 [Multi-domain] Cd Length: 238 Bit Score: 145.98 E-value: 6.60e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 18 LEVIANNIANINTTGYKRARAEFSDLLyqteraqgVPNRSNQAIVPEGAIIGLGVQTSavrnlhiQGSLVNTGNDYDLAL 97
Cdd:PRK12690 19 MQVVANNIANASTTGFRREGLVFSEYV--------KSLDSGEASLSMARASGRQTDLE-------QGGLTQTGGQFDFAI 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 98 VGRGWFQIETPDGEtVYTRSGAFNTNATGQLVTIDGYTVVPG----VTVPQDATEIVFTSSGQVmvrignDTELQEVGQL 173
Cdd:PRK12690 84 EGEGFFMVETPQGE-RLTRAGSFTPNAEGELVDPDGNRLLDAggapIFIPPDARSVAVGADGTL------SADGQPLGQI 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 174 TIANFVNEAGLEPMGENLFRqTPASGDPIVGtpadpgfAQIKQNYLESSNVDPVKEITDLISAQRAYEMNSKIIQAADEM 253
Cdd:PRK12690 157 GLYQPTDPLGLRREGGTRFR-AEGGVEPAEG-------ARLLQGFLEGSNVNPVSEIARMIEVQRAYELGQSFLDREDER 228
|
....*....
gi 516773447 254 AATVSKNLR 262
Cdd:PRK12690 229 IRTTIRTLG 237
|
|
| flgF |
PRK12689 |
flagellar basal-body rod protein FlgF; |
18-256 |
8.86e-40 |
|
flagellar basal-body rod protein FlgF;
Pssm-ID: 183684 [Multi-domain] Cd Length: 253 Bit Score: 138.34 E-value: 8.86e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 18 LEVIANNIANINTTGYKRARAEFSDLLYQTERAQGV--PNRSNQAIVPEGAIIGLGvqtsavrnlhiQGSLVNTGNDYDL 95
Cdd:PRK12689 19 LDVVANNVANVNTNGFKARSSLFQEYLMPGAHEDNFqrPDRRVSYVQDRGTPLDLS-----------QGPLEQTKNPLDV 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 96 ALVGRGWFQIETPDGETvYTRSGAFNTNATGQLVTIDGYTVV----PGVTVPQDaTEIVFTSSGQVMVRIGNDTELQEVG 171
Cdd:PRK12689 88 AIDGDAFLAVQTPQGER-YTRDGALEINAQGQLVTSDGYPVLgtggPITFQPTD-TGIAISPDGTVSVNEGTATTDSIRG 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 172 QLTIANFVNEAGLEPMGENLFrqtPASGDPivgTPADPGfAQIKQNYLESSNVDPVKEITDLISAQRAYEMNSKIIQAAD 251
Cdd:PRK12689 166 KLRLVTFANPQALKKEGANLY---AATAPA---RPADTK-ARVEQGYIERSNVNPVLEMTRMMEVNRTYTQVSSMLQQQS 238
|
....*
gi 516773447 252 EMAAT 256
Cdd:PRK12689 239 DLRKT 243
|
|
| flgG |
PRK12818 |
flagellar basal body rod protein FlgG; Reviewed |
7-259 |
1.31e-37 |
|
flagellar basal body rod protein FlgG; Reviewed
Pssm-ID: 183768 [Multi-domain] Cd Length: 256 Bit Score: 132.90 E-value: 1.31e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 7 AATGMNAQQLNLEVIANNIANINTTGYKR---ARAEFSDLLYQteraqgvpNRSNQA-IVPEGAIIG---LGVQTSAVRN 79
Cdd:PRK12818 8 AVSGMITLEAKQDVITNNLANVNTVGYKSdnlAFKSFEDVLIE--------NYDKKVgNKNVKNIIGglsMGSKIDEVNT 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 80 LHIQGSLVNTGNDYDLALVGRGWFQIETPDGETVYTRSGAFNTNATGQLVTIDGYTVVpGVTVPQDATEIVFTSSGQVMV 159
Cdd:PRK12818 80 LFTQGIIKSTDKPTDFAIQGRGFFTVERNAGNNYYTRDGHFHVDTQGYLVNDSGYYVL-GRNNATGAREPINVGNGKFST 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 160 RIGNDTELQ--EVGQLTIANFVNEAGLEPMGENLFrqtpaSGDpivgTPADPGFAQIKQNYLESSNVDPVKEITDLISAQ 237
Cdd:PRK12818 159 DADGNISLDgnASYKFNVADFNDYNSLKKIGDNLY-----TGN----NPQNINGAIVRQNSLEKSNVNVTNEMVNMMTTM 229
|
250 260
....*....|....*....|..
gi 516773447 238 RAYEMNSKIIQAADEmaaTVSK 259
Cdd:PRK12818 230 RSFETNQKIVQSIDE---TLGK 248
|
|
| flgF |
PRK12640 |
flagellar basal body rod protein FlgF; Reviewed |
2-262 |
2.41e-37 |
|
flagellar basal body rod protein FlgF; Reviewed
Pssm-ID: 183642 [Multi-domain] Cd Length: 246 Bit Score: 131.90 E-value: 2.41e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 2 KALSIAATG----MNAQQlnleVIANNIANINTTGYKRaraefsdllyQTERAQGVPnrsnqaivpegaIIGLG------ 71
Cdd:PRK12640 3 RALYTAMSGasqnLNQQA----VVANNLANASTPGFRA----------DLAQARAVP------------VFGEGlptrvf 56
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 72 VQTSAVRNLHIQGSLVNTGNDYDLALVGRGWFQIETPDGETVYTRSGAFNTNATGQLVTIDGYTVV----PgVTVPQDAt 147
Cdd:PRK12640 57 ALASTPGADFSPGPLQTTGRPLDVALQGDGWLAVQAPDGSEAYTRNGSLQVDANGQLRTANGLPVLgdggP-IAVPPGA- 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 148 EIVFTSSGQVMVRI--GNDTELQEVGQLTIANFVNEAgLEPMGENLFRQTPasGDPivgTPADPGfAQIKQNYLESSNVD 225
Cdd:PRK12640 135 KITIGADGTISALPpgDPPNAVAEVGRLKLVNPPAAQ-LTRGDDGLFRTTD--GAP---APADPT-VRVMSGALEGSNVN 207
|
250 260 270
....*....|....*....|....*....|....*..
gi 516773447 226 PVKEITDLISAQRAYEMNSKIIQAADEMAATVSKNLR 262
Cdd:PRK12640 208 AVEEMVSMIALARQFEMQVKMMKTADENAQAANQLLR 244
|
|
| flgF |
PRK12642 |
flagellar basal-body rod protein FlgF; |
3-241 |
9.45e-31 |
|
flagellar basal-body rod protein FlgF;
Pssm-ID: 237153 [Multi-domain] Cd Length: 241 Bit Score: 114.38 E-value: 9.45e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 3 ALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLYQTErAQGVpnrsnqAIVPEGAIIglgVQTSAvrnlhi 82
Cdd:PRK12642 4 GLYVALSSQMALEKRLDTIADNVANVNTVGFRATEVKFDTVVSDTA-SKKV------AFVSQGKSY---LSTEA------ 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 83 qGSLVNTGNDYDLALVGRGWFQIETPDGeTVYTRSGAFNTNATGQLVTIDGYTVV-PG---VTVPQDATEIVFTSSGQVm 158
Cdd:PRK12642 68 -GPLTKTGNPLDFAVKGDAWFSFDTPAG-QVYTRDGRFTMTSTGELVSVTGYPVLdAGgapIQLNPGGGEPTIGADGAI- 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 159 vrIGNDtelQEVGQLTIANFVNEAGLEPMGENLF----RQTPASGDPIVGtpadpgfaqIKQNYLESSNVDPVKEITDLI 234
Cdd:PRK12642 145 --YQNG---VQVGAIGLFEIDADAGLLRYGNSGVipdkPPQPVVDRNSVG---------VVQGYLEGSNVNAMTEMTQLI 210
|
....*..
gi 516773447 235 SAQRAYE 241
Cdd:PRK12642 211 SVSRAFE 217
|
|
| flgE |
PRK08425 |
flagellar hook protein FlgE; Validated |
1-136 |
1.34e-26 |
|
flagellar hook protein FlgE; Validated
Pssm-ID: 236263 [Multi-domain] Cd Length: 731 Bit Score: 108.25 E-value: 1.34e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 1 MKALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLYQTERAqgvpnrsnqAIVPEGAI-------IGLGVQ 73
Cdd:PRK08425 2 MRSLWSGVSGLQAHQIAMDVEGNNIANVNTTGFKYSRASFVDMLSQTKLI---------ATAPKGGLggqndmqIGLGVG 72
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 516773447 74 TSAVRNLHIQGSLVNTGNDYDLALVGRGWFqIETPDGETV--YTRSGAFNTNATGQLVTIDGYTV 136
Cdd:PRK08425 73 VSSTTKIFSQGSIQNTDKNTDLAIQGDGFF-IVSPDGGTTrnYTRDGDFKFDAQGNFVNNGGYVV 136
|
|
| Flg_bbr_C |
pfam06429 |
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of ... |
182-259 |
3.54e-24 |
|
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which pfam00460 is often present at the extreme N terminus.
Pssm-ID: 428939 [Multi-domain] Cd Length: 74 Bit Score: 92.33 E-value: 3.54e-24
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 516773447 182 AGLEPMGENLFRQTPasGDPIVGTPADpgfAQIKQNYLESSNVDPVKEITDLISAQRAYEMNSKIIQAADEMAATVSK 259
Cdd:pfam06429 1 AGLEKGGDNLFRETD--GAPILGAGAD---GRVQQGYLEGSNVNPVEEMVNMIEAQRAYEANSKVIQTADEMLQTANQ 73
|
|
| flgE |
PRK06803 |
flagellar basal body protein FlaE; |
5-253 |
4.92e-23 |
|
flagellar basal body protein FlaE;
Pssm-ID: 235862 [Multi-domain] Cd Length: 402 Bit Score: 96.76 E-value: 4.92e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 5 SIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLyqterAQGVPnrsnqaivpegaiigLGVQTSAV-RNLHIQ 83
Cdd:PRK06803 4 NIALSGLNATTQQLNTISNNIANSSTKGFKGSRTEFSSIY-----NGGQP---------------GGVEVSSVsQNFSKD 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 84 GSLVNTGNDYDLALVGRGWFQIETPDGETVYTRSGAFNTNATGQLVT-----IDGYTV---------------------- 136
Cdd:PRK06803 64 GSLTYTGRGLDLAISGGGFFVLKESDGDTAYTRAGMFRSDVDGYLTDpqgmkLQGYPVdaagnlqtgnvsdlqvqtaslp 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 137 --------------------VPGVTV--PQDATEIVFTSSGQVMVRIGND------------------------------ 164
Cdd:PRK06803 144 akatdqldfvanldasvtpiDPSVSPfdPTDEKSYNSSTTSTVYDSLGNEhavtqyfvktatnewavhytvdggdvtppl 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 --------------------------------------------------------------------------------
Cdd:PRK06803 224 ghtlqfddtgalipgkgstinlhgtfnpagasdydididytgstqyaadfnnsrnksngytsgelngvriedngmvyaty 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 165 TELQEV--GQLTIANFVNEAGLEPMGENLFRQTPASGDPIVGTPADPGFAQIKQNYLESSNVDPVKEITDLISAQRAYEM 242
Cdd:PRK06803 304 TNGQRQlqGQVVLANFANPNGLVTVSNTAWSASNKSGAPILGTPGTGTLGSLTSGALEGSNVDITAELVGLMTAQRNYQA 383
|
410
....*....|.
gi 516773447 243 NSKIIQAADEM 253
Cdd:PRK06803 384 NAKVISTNDTM 394
|
|
| flgE |
PRK08425 |
flagellar hook protein FlgE; Validated |
170-256 |
4.18e-18 |
|
flagellar hook protein FlgE; Validated
Pssm-ID: 236263 [Multi-domain] Cd Length: 731 Bit Score: 83.59 E-value: 4.18e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 170 VGQLTIANFVNEAGLEPMGENLFRQTPASGDPIVGTPADPGFAQIKQNYLESSNVDPVKEITDLISAQRAYEMNSKIIQA 249
Cdd:PRK08425 639 LAQVALANFANNAGLQAEGGNVFSQTANSGQAVIGAAGTGGRGSISGSKLEMSNVDLSRSLTQLIVIQRGFQANSKTITT 718
|
....*..
gi 516773447 250 ADEMAAT 256
Cdd:PRK08425 719 SDQMLNT 725
|
|
| flgF |
TIGR02490 |
flagellar basal-body rod protein FlgF; Members of this protein are FlgF, one of several ... |
168-241 |
4.56e-16 |
|
flagellar basal-body rod protein FlgF; Members of this protein are FlgF, one of several homologous flagellar basal-body rod proteins in bacteria. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274160 [Multi-domain] Cd Length: 89 Bit Score: 71.12 E-value: 4.56e-16
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 516773447 168 QEVGQLTIANFVNEAGLEPMGENLFRQTPAsgdpiVGTPADPGFaQIKQNYLESSNVDPVKEITDLISAQRAYE 241
Cdd:TIGR02490 22 EEVGRLGLVNFDNPNQLQREGDGLFRATGG-----GPAPADSNV-RVVQGYLEGSNVNAVSEMVDMIEAQRAYE 89
|
|
| flgF |
PRK12641 |
flagellar basal-body rod protein FlgF; |
17-259 |
1.17e-14 |
|
flagellar basal-body rod protein FlgF;
Pssm-ID: 105809 [Multi-domain] Cd Length: 252 Bit Score: 71.51 E-value: 1.17e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 17 NLEVIANNIANINTTGYKrarAEFSdlLYQTERAQGVPNRSNQAIVPEgaiiglgvqtsaVRNLHiQGSLVNTGNDYDLA 96
Cdd:PRK12641 18 KQAIIANNLANISTTGFK---EKFI--LAIQNHNVKNLYNSDKKITKE------------YYNLS-PGTLRYTGRNLDLF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 97 LVGRGWFQIETPDGETVYTRSGAFNTNATGQLvTIDGYTVVP---GVTVPQDatEIVFTSSGQVMVRIGNDTEL---QEV 170
Cdd:PRK12641 80 IKDNGWLTIKDTNGQEAYTKNGHLKINSKRKL-TVQNNEVIGnngNIIIPKN--INLKISSNGVITSIKNNHKHiveTKI 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 171 GQLTIANF-VNEAGLEPMGENLFRQTPASGDPIVGTPADPGFAQIKQNYLESSNVDPVKEITDLISAQRAYEMNSKIIQA 249
Cdd:PRK12641 157 GSLKLVQLpSQDLIQKENGLFYLKKNNEINKKHTKNIKHSSKIRVQSGMLEESNVNASKNMIEMISNARQFEMQMKIISM 236
|
250
....*....|
gi 516773447 250 ADEMAATVSK 259
Cdd:PRK12641 237 CDQNTEYANQ 246
|
|
| flgE |
PRK12637 |
flagellar hook protein FlgE; Provisional |
166-253 |
7.19e-14 |
|
flagellar hook protein FlgE; Provisional
Pssm-ID: 183641 [Multi-domain] Cd Length: 473 Bit Score: 70.94 E-value: 7.19e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 166 ELQEVGQLTIANFVNEAGLEPMGENLFRQTPASGDPIVGTPADPGFAQIKQNYLESSNVDPVKEITDLISAQRAYEMNSK 245
Cdd:PRK12637 378 ETQTIGTLVLANFNNVQGLQPVGNNAWVETSESGQATLGQPGTNGLATIAGQALEASNVDMSRELVNMIVAQRTYQANAQ 457
|
....*...
gi 516773447 246 IIQAADEM 253
Cdd:PRK12637 458 TIKTQDEV 465
|
|
| flgE |
PRK05841 |
flagellar hook protein FlgE; Validated |
170-253 |
2.71e-13 |
|
flagellar hook protein FlgE; Validated
Pssm-ID: 235620 [Multi-domain] Cd Length: 603 Bit Score: 69.10 E-value: 2.71e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 170 VGQLTIANFVNEAGLEPMGENLFRQT---------PASGDPIVGTPADPG--FAQIKQNYLESSNVDPVKEITDLISAQR 238
Cdd:PRK05841 500 MGRIGIAAFTNDQGLRKVGGNLFEMQegtingenrPLSGNPILGWDEEGKlkFGKVRHKYLETSNVDAGNALTNLILMQR 579
|
90
....*....|....*
gi 516773447 239 AYEMNSKIIQAADEM 253
Cdd:PRK05841 580 GYSMNARAFGTGDDL 594
|
|
| flgG |
PRK12819 |
flagellar basal-body rod protein FlgG; |
1-253 |
1.04e-12 |
|
flagellar basal-body rod protein FlgG;
Pssm-ID: 183769 [Multi-domain] Cd Length: 257 Bit Score: 66.05 E-value: 1.04e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 1 MKALSIAATGMNAQQLNLEVIANNIANINTTGYKraraeFSDLLYQTERAQGVpNRSNQAIVPEGAIIGLGVQTSAVRNL 80
Cdd:PRK12819 1 MNGLYIGSMGMMNYMQRINVHSNNVANAQTTGFK-----AENMTSKVFDVQDT-YRRGDGAVTNIGSVDYAVVPAATHVN 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 81 HIQGSLVNTGNDYDLAL----VGRGWFQIETPDGETVYTRSGAFNTNATGQLVTIDGYTVV----PGVTVPQDATeiVFT 152
Cdd:PRK12819 75 LVQGNIQMTNSDTDFFLddgpAGTSSFFVTSKNGETFLTRDGSFTLNSDRYLQTASGAFVMgennERIRIPEGAK--VAV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 153 SSGQVMVRIGNDTELQEVGQLTIANFVNeAGLEPMGENLFrqTPASGDpIVGTPAdpGFAQIKQNYLESSNVDPVKEITD 232
Cdd:PRK12819 153 QADGTLYDAVTQNNIARLQTKTVSAEQN-DRLVQRENKSF--TLAEGN-IANLPN--GQGIVKNGMLENSNVDMTKEMAD 226
|
250 260
....*....|....*....|.
gi 516773447 233 LISAQRAYEMNSKIIQAADEM 253
Cdd:PRK12819 227 LMTDQRMIQASQRVMTSFDKI 247
|
|
| flgE |
PRK12637 |
flagellar hook protein FlgE; Provisional |
7-134 |
1.63e-11 |
|
flagellar hook protein FlgE; Provisional
Pssm-ID: 183641 [Multi-domain] Cd Length: 473 Bit Score: 63.62 E-value: 1.63e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 7 AATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDlLYQTERaqgvpnrsnqaivpegaiIGLGVQTSAVRNLHIQGSL 86
Cdd:PRK12637 6 GLSGLNAASQNLDVIGNNIANSGTVGFKSGAASFAD-VYASSR------------------VGLGVKVSAINQRFTVGNI 66
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 516773447 87 VNTGNDYDLAL-VGRGWFQIETPDGETVYTRSGAFNTNATGQLVTIDGY 134
Cdd:PRK12637 67 STTGGEYDMAIdGGKGFFRLTDQSGGVFYSRNGEFMVDKNFYIVNAQGF 115
|
|
| flgE |
PRK05841 |
flagellar hook protein FlgE; Validated |
9-136 |
2.17e-10 |
|
flagellar hook protein FlgE; Validated
Pssm-ID: 235620 [Multi-domain] Cd Length: 603 Bit Score: 60.63 E-value: 2.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 9 TGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLyqterAQGVPNRSNQAIVPEGAIIGLGVQTSAVRNLhiQGSLVN 88
Cdd:PRK05841 10 SGIKTHQFGLDSLSNNIANVNTLGYRSNIPEFKTLF-----SSHLDALNAKSVVANDRNYGVTGSSNAISNK--DGEYKP 82
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 516773447 89 TGNDYDLALVGRGWFQIET---------PDG-----ETVYTRSGAFNTNATGQLVTIDGYTV 136
Cdd:PRK05841 83 SDGEFHMAYQGKGWFVVGPnkngsmtinKDGfskkqDNYFTRDGSFARDADGYLVNPEGYYV 144
|
|
| FlgK |
COG1256 |
Flagellar hook-associated protein FlgK [Cell motility]; |
1-78 |
2.78e-09 |
|
Flagellar hook-associated protein FlgK [Cell motility];
Pssm-ID: 440868 [Multi-domain] Cd Length: 479 Bit Score: 57.20 E-value: 2.78e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 516773447 1 MKALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLLYQTERAQGvpnrsnqaivpegaiIGLGVQTSAVR 78
Cdd:COG1256 3 FSALNIALSGLNAAQRALDVTSHNIANANTPGYSRQRVVLSAAGPTATGAGQ---------------VGTGVRVTGIR 65
|
|
| flgC |
PRK05681 |
flagellar basal body rod protein FlgC; Reviewed |
218-254 |
7.60e-09 |
|
flagellar basal body rod protein FlgC; Reviewed
Pssm-ID: 235556 [Multi-domain] Cd Length: 135 Bit Score: 52.90 E-value: 7.60e-09
10 20 30
....*....|....*....|....*....|....*..
gi 516773447 218 YLESSNVDPVKEITDLISAQRAYEMNSKIIQAADEMA 254
Cdd:PRK05681 90 YVKYPNVNVVVEMVDMISASRSYEANVEVLNAAKSMM 126
|
|
| flgC |
PRK05681 |
flagellar basal body rod protein FlgC; Reviewed |
1-53 |
8.14e-09 |
|
flagellar basal body rod protein FlgC; Reviewed
Pssm-ID: 235556 [Multi-domain] Cd Length: 135 Bit Score: 52.90 E-value: 8.14e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 516773447 1 MKALSIAATGMNAQQLNLEVIANNIANINTTG------YKRARAEFSDLLYQTERAQGV 53
Cdd:PRK05681 4 FSSFNIAGSGLSAQSQRLNVISSNIANADSTAapdgdpYRRKQVVFAAELDPGQGTGGV 62
|
|
| FlgC |
COG1558 |
Flagellar basal body rod protein FlgC [Cell motility]; |
215-254 |
3.05e-08 |
|
Flagellar basal body rod protein FlgC [Cell motility];
Pssm-ID: 441166 [Multi-domain] Cd Length: 135 Bit Score: 51.27 E-value: 3.05e-08
10 20 30 40
....*....|....*....|....*....|....*....|
gi 516773447 215 KQNYLESSNVDPVKEITDLISAQRAYEMNSKIIQAADEMA 254
Cdd:COG1558 88 ADGYVRYPNVNVVEEMVDMISASRSYEANVEVINTAKSML 127
|
|
| flgF |
PRK12643 |
flagellar basal body rod protein FlgF; Reviewed |
8-224 |
5.83e-08 |
|
flagellar basal body rod protein FlgF; Reviewed
Pssm-ID: 139117 [Multi-domain] Cd Length: 209 Bit Score: 51.77 E-value: 5.83e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 8 ATGMNAQQLNLE-VIANNIANINTTGYkraRAEFSDLlyqteRAQGV--PNRSNQAIVPEGAIiglGVQTSavrnlhiQG 84
Cdd:PRK12643 8 AMGAARQSLELQaVTANNLANASTPGF---RAQLAAM-----RAVPIdgPSLATRTMVTTSTP---GVDIS-------QG 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 85 SLVNTGNDYDLALVGRGWFQIETPDGETVYTRSGAFNTNATGQLvTIDGYTVV----PGVTVPQDATEIVFTSSGQVMVR 160
Cdd:PRK12643 70 TMNFSGRPLDVALQQDGYLAVQLPDGSEAYTRNGNIQISANGQM-TVQGYPLMgdngPIDVPPQAAVTIAADGTISALNA 148
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 516773447 161 IGNDTELQEVGQltIANFVNEAGLEPMGEN-LFRQTPASGDPI-VGTPADPgfaQIKQNYLESSNV 224
Cdd:PRK12643 149 GDSPNTIAQLGQ--IKRVQATAGEMMHGDDgLFHLTPETQQARgAQLPNDP---LVKPGEREHQWL 209
|
|
| Flg_bb_rod |
pfam00460 |
Flagella basal body rod protein; |
4-33 |
2.47e-07 |
|
Flagella basal body rod protein;
Pssm-ID: 459821 [Multi-domain] Cd Length: 30 Bit Score: 46.02 E-value: 2.47e-07
10 20 30
....*....|....*....|....*....|
gi 516773447 4 LSIAATGMNAQQLNLEVIANNIANINTTGY 33
Cdd:pfam00460 1 LYTAVSALNAQQIRLDVIANNIANANTPGY 30
|
|
| flgK_ends |
TIGR02492 |
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of ... |
3-81 |
2.85e-07 |
|
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of bacterial flagella has conserved N- and C-terminal domains. The central region is highly variable in length and sequence, and often contains substantial runs of low-complexity sequence. This model is built from an alignment of FlgK sequences with the central region excised. Note that several other proteins of the flagellar apparatus also are homologous in the N- and C-terminal regions to FlgK, but are excluded from this model. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274162 [Multi-domain] Cd Length: 323 Bit Score: 50.42 E-value: 2.85e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 516773447 3 ALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSdllyqteraqgvpnrSNQAIVPEGAIIGLGVQTSAVRNLH 81
Cdd:TIGR02492 2 LLNIAKSGLSASQIALSVTSNNIANANTPGYSRQRAVLT---------------AVPAGGQGGKQIGTGVKVTSIRRIQ 65
|
|
| FlgB |
COG1815 |
Flagellar basal body rod protein FlgB [Cell motility]; |
2-44 |
4.28e-07 |
|
Flagellar basal body rod protein FlgB [Cell motility];
Pssm-ID: 441420 Cd Length: 135 Bit Score: 47.98 E-value: 4.28e-07
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 516773447 2 KALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLL 44
Cdd:COG1815 7 KTFGLLEKALDLRSLRQEVIASNIANADTPGYKARDVDFEAAL 49
|
|
| flgC |
PRK12632 |
flagellar basal body rod protein FlgC; Provisional |
2-40 |
1.04e-06 |
|
flagellar basal body rod protein FlgC; Provisional
Pssm-ID: 183637 [Multi-domain] Cd Length: 130 Bit Score: 46.72 E-value: 1.04e-06
10 20 30
....*....|....*....|....*....|....*....
gi 516773447 2 KALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEF 40
Cdd:PRK12632 6 KSLSVSASGMRAQALRLRHVSENIANADTPGYRRKTVSF 44
|
|
| FlgC |
TIGR01395 |
flagellar basal-body rod protein FlgC; This model represents FlgC, one of several components ... |
218-255 |
1.25e-06 |
|
flagellar basal-body rod protein FlgC; This model represents FlgC, one of several components of bacterial flagella that share a domain described by pfam00460. FlgC is part of the basal body. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 130462 [Multi-domain] Cd Length: 135 Bit Score: 46.58 E-value: 1.25e-06
10 20 30
....*....|....*....|....*....|....*...
gi 516773447 218 YLESSNVDPVKEITDLISAQRAYEMNSKIIQAADEMAA 255
Cdd:TIGR01395 91 YVKMPNVNVVEEMVDMIEASRSYEANVQVFNTAKSMFL 128
|
|
| flgK |
PRK07739 |
flagellar hook-associated protein FlgK; Validated |
4-40 |
1.03e-05 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 236084 [Multi-domain] Cd Length: 507 Bit Score: 46.16 E-value: 1.03e-05
10 20 30
....*....|....*....|....*....|....*..
gi 516773447 4 LSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEF 40
Cdd:PRK07739 8 LETARRGLFAQQAALYVTGHNIANANTPGYTRQRVNL 44
|
|
| FlgB |
TIGR01396 |
flagellar basal-body rod protein FlgB; This model represents FlgB, one of several components ... |
2-44 |
1.39e-05 |
|
flagellar basal-body rod protein FlgB; This model represents FlgB, one of several components of bacterial flagella that share a domain described by pfam00460. FlgB is part of the basal body. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 273598 [Multi-domain] Cd Length: 131 Bit Score: 43.53 E-value: 1.39e-05
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 516773447 2 KALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLL 44
Cdd:TIGR01396 3 NAFGLLQQALDVRSLRQEVIANNIANVDTPGYKAKDVSFEAEL 45
|
|
| flgB |
PRK12623 |
flagellar basal body rod protein FlgB; Provisional |
10-44 |
2.65e-05 |
|
flagellar basal body rod protein FlgB; Provisional
Pssm-ID: 183630 Cd Length: 131 Bit Score: 42.85 E-value: 2.65e-05
10 20 30
....*....|....*....|....*....|....*
gi 516773447 10 GMNAQQLNLEVIANNIANINTTGYKRARAEFSDLL 44
Cdd:PRK12623 19 GLDASSYRGKVISNNIANVNTKGYKRHYVTFEENL 53
|
|
| flgC |
PRK12782 |
flagellar basal body rod protein FlgC; Reviewed |
1-55 |
4.16e-05 |
|
flagellar basal body rod protein FlgC; Reviewed
Pssm-ID: 139220 Cd Length: 138 Bit Score: 42.44 E-value: 4.16e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 516773447 1 MKALSIAATGMNAQQLNLEVIANNIANINTTG-------YKRARAEFSDLLyqtERAQGVPN 55
Cdd:PRK12782 6 LASSRIASSGLEAQSTRLRVVSENLANAQSTGrtpgadpYARKTVTFRAEL---DRAAGAAS 64
|
|
| flgC |
PRK12632 |
flagellar basal body rod protein FlgC; Provisional |
218-262 |
1.46e-04 |
|
flagellar basal body rod protein FlgC; Provisional
Pssm-ID: 183637 [Multi-domain] Cd Length: 130 Bit Score: 40.56 E-value: 1.46e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 516773447 218 YLESSNVDPVKEITDLISAQRAYEMNSKIIQAADEMAATVSKNLR 262
Cdd:PRK12632 85 YYDGSNVDLVVEIADAREAQRSYEANLRMFDQARQMSSSLLDLLR 129
|
|
| flgK |
PRK12715 |
flagellar hook-associated protein FlgK; Provisional |
1-80 |
2.02e-04 |
|
flagellar hook-associated protein FlgK; Provisional
Pssm-ID: 183698 [Multi-domain] Cd Length: 649 Bit Score: 42.42 E-value: 2.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 1 MKALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSdllyqteraqgvPNRSNQAivpEGAIIGLGVQTSAV-RN 79
Cdd:PRK12715 1 MSILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFT------------PIASNRY---AGSYIGAGVSVSSIyRN 65
|
.
gi 516773447 80 L 80
Cdd:PRK12715 66 V 66
|
|
| flgK |
PRK08471 |
flagellar hook-associated protein FlgK; Validated |
4-81 |
2.37e-04 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 236270 [Multi-domain] Cd Length: 613 Bit Score: 41.96 E-value: 2.37e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 516773447 4 LSIAATGMNAQQLNLEVIANNIANINTTGYKRARaefsdllyqteraqgVPNRSNQAIVPEGAIIGLGVQTSAVRNLH 81
Cdd:PRK08471 8 LNTGYTGLQAAQVMVDTTGNNISNASSEFYTRQR---------------VVQSAQAALNTGGGNVGTGTDIETIVRIH 70
|
|
| flgK |
PRK06945 |
flagellar hook-associated protein FlgK; Validated |
4-38 |
2.95e-04 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 235895 [Multi-domain] Cd Length: 651 Bit Score: 41.93 E-value: 2.95e-04
10 20 30
....*....|....*....|....*....|....*
gi 516773447 4 LSIAATGMNAQQLNLEVIANNIANINTTGYKRARA 38
Cdd:PRK06945 5 LNIGLSGLNAAQWGLTTTGHNISNAATPGYSRQRV 39
|
|
| flgK |
PRK07191 |
flagellar hook-associated protein FlgK; Validated |
1-80 |
8.65e-04 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 180871 [Multi-domain] Cd Length: 456 Bit Score: 40.19 E-value: 8.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 516773447 1 MKALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDllyQTERAQGVPNRSNqaivpegaiiglGVQTSAVRNL 80
Cdd:PRK07191 1 MNFIRTAFSGMQAAQAHLNATSMNIANMHTPGYSRQGVEQSA---IGADGQGGVNAGN------------GVNVDGIRRL 65
|
|
| flgK |
PRK05683 |
flagellar hook-associated protein FlgK; Validated |
1-35 |
8.89e-04 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 235558 [Multi-domain] Cd Length: 676 Bit Score: 40.48 E-value: 8.89e-04
10 20 30
....*....|....*....|....*....|....*
gi 516773447 1 MKALSIAATGMNAQQLNLEVIANNIANINTTGYKR 35
Cdd:PRK05683 1 MSLISIGLSGLGASQTALAVTGNNIANVDTAGYSR 35
|
|
| FlgK |
COG1256 |
Flagellar hook-associated protein FlgK [Cell motility]; |
211-253 |
1.03e-03 |
|
Flagellar hook-associated protein FlgK [Cell motility];
Pssm-ID: 440868 [Multi-domain] Cd Length: 479 Bit Score: 39.86 E-value: 1.03e-03
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 516773447 211 FAQIKQNYLESSNVDPVKEITDLISAQRAYEMNSKIIQAADEM 253
Cdd:COG1256 428 LDQLENQRQSVSGVNLDEEMANLIKFQQAYQANARVITTADEM 470
|
|
| flgC |
PRK12630 |
flagellar basal body rod protein FlgC; Provisional |
1-44 |
2.91e-03 |
|
flagellar basal body rod protein FlgC; Provisional
Pssm-ID: 183635 Cd Length: 143 Bit Score: 37.12 E-value: 2.91e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 516773447 1 MKALS---IAATGMNAQQLNLEVIANNIANINTT------GYKRARAEFSDLL 44
Cdd:PRK12630 1 MKAFDtmrISASGLSAERLRMDTIASNIANATTTrtadggPYKRKIAVFQENL 53
|
|
| flgK |
PRK12714 |
flagellar hook-associated protein FlgK; Provisional |
1-68 |
3.57e-03 |
|
flagellar hook-associated protein FlgK; Provisional
Pssm-ID: 183697 [Multi-domain] Cd Length: 624 Bit Score: 38.39 E-value: 3.57e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 516773447 1 MKALSIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFsdllyqterAQGVPNRSNQAIVPEGAII 68
Cdd:PRK12714 1 MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEF---------ATRTPTDMGYAFVGNGAKI 59
|
|
| flgK |
PRK08147 |
flagellar hook-associated protein FlgK; Validated |
6-38 |
4.32e-03 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 236165 [Multi-domain] Cd Length: 547 Bit Score: 38.12 E-value: 4.32e-03
10 20 30
....*....|....*....|....*....|...
gi 516773447 6 IAATGMNAQQLNLEVIANNIANINTTGYKRARA 38
Cdd:PRK08147 7 TAMSGLNAAQAALNTVSNNISNYNVAGYTRQTT 39
|
|
| flgB |
PRK12621 |
flagellar basal body rod protein FlgB; Provisional |
1-44 |
5.17e-03 |
|
flagellar basal body rod protein FlgB; Provisional
Pssm-ID: 171613 Cd Length: 136 Bit Score: 36.27 E-value: 5.17e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 516773447 1 MKAL-----SIAATGMNAQQLNLEVIANNIANINTTGYKRARAEFSDLL 44
Cdd:PRK12621 1 MKSLfeshiNLVGKVMDMQLQRQNVVMSNLANVNTPGYKPRELEFEKEL 49
|
|
| flgC |
PRK12631 |
flagellar basal body rod protein FlgC; Provisional |
218-253 |
6.24e-03 |
|
flagellar basal body rod protein FlgC; Provisional
Pssm-ID: 183636 Cd Length: 138 Bit Score: 36.09 E-value: 6.24e-03
10 20 30
....*....|....*....|....*....|....*.
gi 516773447 218 YLESSNVDPVKEITDLISAQRAYEMNSKIIQAADEM 253
Cdd:PRK12631 94 FIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSM 129
|
|
| |
