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Conserved domains on  [gi|517382877|ref|WP_018556905|]
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dimethylargininase [Streptomyces sp. BoleA5]

Protein Classification

dimethylarginine dimethylaminohydrolase family protein( domain architecture ID 10004634)

dimethylarginine dimethylaminohydrolase (DdaH) family protein similar to Pseudomonas aeruginosa N(G),N(G)-dimethylarginine dimethylaminohydrolase that hydrolyzes N(G),N(G)-dimethyl-L-arginine (ADMA) and N(G)-monomethyl-L-arginine (MMA)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DdaH COG1834
N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism];
1-256 2.86e-107

N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism];


:

Pssm-ID: 441439 [Multi-domain]  Cd Length: 264  Bit Score: 310.57  E-value: 2.86e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517382877   1 MCPPTYFRVTYSINpWMDPTK-----PVDPALALLQWEDLRDRYRALGHTVEILQPLPGLPDMVFAANGATVVDGRVFGA 75
Cdd:COG1834    4 MCRPDHFGVEYAIN-WMDPLRewagpPPDAERAVAQWDALVDALEALGVEVHRLPPVPGLPDMVFTRDAGLVIGDGAILA 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517382877  76 RFANPERAAEAPAHREWFLNRGYgEVHDPHHA--NEGeGDFAVTESWLLAGKGFRSSPLSHSELQEFFGRPVIGLELTDP 153
Cdd:COG1834   83 RMRHPERRGEEAAYREWLEELGI-PVVRLPEPgvFEG-GDVLLDGDTLLVGYGFRTNRAGIEWLARLLGYEVVPLELVDP 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517382877 154 HFYHLDTALCVLSGDEIMYYPDAFSPGSRAVLRRLFPDALTATRQDAAAFGLNCVS-DGLHVLVPSGATGLLRRLRERGY 232
Cdd:COG1834  161 RFLHLDTAFCPLAPGLALVYPEAFDPESLALLKEPGWDLIEVPEEEAAWLGCNVLSlGGRRVVSPAGNPRLNAALRAAGF 240
                        250       260
                 ....*....|....*....|....
gi 517382877 233 EPVPVDMSELHKAGGSVKCCTMEL 256
Cdd:COG1834  241 EVIEVDLSEFLKGGGGFHCLTLPL 264
 
Name Accession Description Interval E-value
DdaH COG1834
N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism];
1-256 2.86e-107

N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism];


Pssm-ID: 441439 [Multi-domain]  Cd Length: 264  Bit Score: 310.57  E-value: 2.86e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517382877   1 MCPPTYFRVTYSINpWMDPTK-----PVDPALALLQWEDLRDRYRALGHTVEILQPLPGLPDMVFAANGATVVDGRVFGA 75
Cdd:COG1834    4 MCRPDHFGVEYAIN-WMDPLRewagpPPDAERAVAQWDALVDALEALGVEVHRLPPVPGLPDMVFTRDAGLVIGDGAILA 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517382877  76 RFANPERAAEAPAHREWFLNRGYgEVHDPHHA--NEGeGDFAVTESWLLAGKGFRSSPLSHSELQEFFGRPVIGLELTDP 153
Cdd:COG1834   83 RMRHPERRGEEAAYREWLEELGI-PVVRLPEPgvFEG-GDVLLDGDTLLVGYGFRTNRAGIEWLARLLGYEVVPLELVDP 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517382877 154 HFYHLDTALCVLSGDEIMYYPDAFSPGSRAVLRRLFPDALTATRQDAAAFGLNCVS-DGLHVLVPSGATGLLRRLRERGY 232
Cdd:COG1834  161 RFLHLDTAFCPLAPGLALVYPEAFDPESLALLKEPGWDLIEVPEEEAAWLGCNVLSlGGRRVVSPAGNPRLNAALRAAGF 240
                        250       260
                 ....*....|....*....|....
gi 517382877 233 EPVPVDMSELHKAGGSVKCCTMEL 256
Cdd:COG1834  241 EVIEVDLSEFLKGGGGFHCLTLPL 264
DDAH_eukar pfam19420
N,N dimethylarginine dimethylhydrolase, eukaryotic; This family contains N(G),N(G) ...
26-257 3.51e-11

N,N dimethylarginine dimethylhydrolase, eukaryotic; This family contains N(G),N(G)-dimethylarginine dimethylaminohydrolases (DDAH) from eukaryotes. It also includes arginine deiminases and DDAH from prokaryotes. These enzymes are involved in arginine metabolism and belong to the amidinotransferase (AT) superfamily as they share the alpha/beta propeller fold, which includes structurally important residues (buried hydrophobic residues, buried hydrophilic residues hydrogen-bonded with mainchain groups and the hallmark of three consecutive buried Gly residues near the C-terminus, conserved among its members.


Pssm-ID: 437252 [Multi-domain]  Cd Length: 288  Bit Score: 62.01  E-value: 3.51e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517382877   26 ALALLQWEDLRDRYRALGHTVEILQ-PLPGLPDMVFAAN-GATVVDGRVFGARFANPERAAEAPAHREWFLNR------- 96
Cdd:pfam19420  26 ERALKEFDAMVQALRQNGIEVIVLDdTEPKTPDAVFPNNwFSTHADGTVFLYPMYAENRRLERREDLLELLLEkgfavyk 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517382877   97 --GYGEVHDPHHANEGEGDFAV--TESWLLAGKGFRSSPLSHSELQEFFGRPVIGLE---LTDPH---FYHLDTALCVLS 166
Cdd:pfam19420 106 vlDYSGFEDESKFLEGTGDMVFdhENKIAYGALSPRADEEVLEEVCREIGYKPVTFHsevIVDRKgkpIYHTNVMMNVGE 185
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517382877  167 GDEIMYYPDAFSPGSR-AVLRRLFPDA---LTATRQDAAAFGLNC--VSDGLHVLVPSGA-----TGLLRRLRERGYEPV 235
Cdd:pfam19420 186 DLAVVCLESIPDRKEReLVLRALTQSGkeiIDISEEQIFHFAGNVleLCNGNKNLIMSVTaydslTPVQEQLIEKYCEVI 265
                         250       260
                  ....*....|....*....|...
gi 517382877  236 PVDMSEL-HKAGGSVKCCTMELR 257
Cdd:pfam19420 266 SVDIPTIeRLGGGSARCMIAEIF 288
amidinotransferase-like cd21113
L-arginine:glycine amidinotransferase, inosamine-phosphate amidinotransferase and similar ...
54-257 6.99e-11

L-arginine:glycine amidinotransferase, inosamine-phosphate amidinotransferase and similar proteins; This family contains amidinotransferase enzymes known to catalyze the transfer of the amidino group from a donor molecule (usually arginine) to an acceptor molecule bearing a primary amine. They are widespread in nature, occurring in essential metabolic pathways in eukaryotes as well as in biosynthetic pathways for antibiotics and virulence factors in prokaryotes. This family includes L-arginine:glycine amidinotransferase (EC 2.1.4.1; also called glycine amidinotransferase, arginine-glycine amidinotransferase, or arginine-glycine transamidinase), inosamine-phosphate amidinotransferase (EC 2.1.4.2; also called inosamine amidinotransferase, inosamine-P amidinotransferase, or scyllo-inosamine-4-phosphate amidinotransferase or L-arginine:inosamine phosphate amidinotransferase), and similar proteins. L-arginine:glycine amidinotransferase (AT or AGAT) catalyzes the committed step in creatine biosynthesis by formation of guanidinoacetic acid, the immediate precursor of creatine. Inosamine-phosphate amidinotransferases catalyze two nonconsecutive transamidination reactions in the biosynthesis of the streptomycin family of antibiotics. This family also includes L-arginine:inosamine-phosphate Streptomyces griseus amidinotransferase StrB1, which is structurally similar to human L-arginine:glycine amidinotransferase; AT and StrB1 share conserved residues involved in substrate binding and catalysis at equivalent topological positions, suggesting a similar reaction mechanism among amidinotransferases.


Pssm-ID: 439146  Cd Length: 336  Bit Score: 61.37  E-value: 6.99e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517382877  54 GLPDMVFAANGATVVDGRVFGARFANPERAAEAPAHR----EWFLNRGYGEVHDPH--------HANEGEGDFAVTESW- 120
Cdd:cd21113   92 GETTGVMPRDILFVIGNKIIEAPMAWPSRFFEELAYRdileDYGESGLYRVMRAPKpeggddlyDGQAPAGEDIITETEp 171
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517382877 121 -------------LLAGKGFRSSPLSHSELQEFFGR--PVIGLELTDPHFYHLDTALCVLSGDEIMYYPDAFSPGSRA-V 184
Cdd:cd21113  172 lfdaadfmrfgkdIIGQRSQVTNMKGIEWLREYLGDdyTVHIIELDDPHPMHLDCTFLPLREGLALIYPSRVVEPRQIpD 251
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517382877 185 LRRLFpDALTATRQDAAAF----------GLNCVS-DGLHVLVPSGATGLLRRLRERGYEPVPVDMSELHKAGGSVKCCT 253
Cdd:cd21113  252 FFKGW-ELINVPEYPEPDDhplymcsnwlGTNVLSlDEKTIIVERREVHLNRQLRKLGMNVIEIPFYHAISLGGGFHCAT 330

                 ....
gi 517382877 254 MELR 257
Cdd:cd21113  331 MDLV 334
 
Name Accession Description Interval E-value
DdaH COG1834
N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism];
1-256 2.86e-107

N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism];


Pssm-ID: 441439 [Multi-domain]  Cd Length: 264  Bit Score: 310.57  E-value: 2.86e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517382877   1 MCPPTYFRVTYSINpWMDPTK-----PVDPALALLQWEDLRDRYRALGHTVEILQPLPGLPDMVFAANGATVVDGRVFGA 75
Cdd:COG1834    4 MCRPDHFGVEYAIN-WMDPLRewagpPPDAERAVAQWDALVDALEALGVEVHRLPPVPGLPDMVFTRDAGLVIGDGAILA 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517382877  76 RFANPERAAEAPAHREWFLNRGYgEVHDPHHA--NEGeGDFAVTESWLLAGKGFRSSPLSHSELQEFFGRPVIGLELTDP 153
Cdd:COG1834   83 RMRHPERRGEEAAYREWLEELGI-PVVRLPEPgvFEG-GDVLLDGDTLLVGYGFRTNRAGIEWLARLLGYEVVPLELVDP 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517382877 154 HFYHLDTALCVLSGDEIMYYPDAFSPGSRAVLRRLFPDALTATRQDAAAFGLNCVS-DGLHVLVPSGATGLLRRLRERGY 232
Cdd:COG1834  161 RFLHLDTAFCPLAPGLALVYPEAFDPESLALLKEPGWDLIEVPEEEAAWLGCNVLSlGGRRVVSPAGNPRLNAALRAAGF 240
                        250       260
                 ....*....|....*....|....
gi 517382877 233 EPVPVDMSELHKAGGSVKCCTMEL 256
Cdd:COG1834  241 EVIEVDLSEFLKGGGGFHCLTLPL 264
DDAH_eukar pfam19420
N,N dimethylarginine dimethylhydrolase, eukaryotic; This family contains N(G),N(G) ...
26-257 3.51e-11

N,N dimethylarginine dimethylhydrolase, eukaryotic; This family contains N(G),N(G)-dimethylarginine dimethylaminohydrolases (DDAH) from eukaryotes. It also includes arginine deiminases and DDAH from prokaryotes. These enzymes are involved in arginine metabolism and belong to the amidinotransferase (AT) superfamily as they share the alpha/beta propeller fold, which includes structurally important residues (buried hydrophobic residues, buried hydrophilic residues hydrogen-bonded with mainchain groups and the hallmark of three consecutive buried Gly residues near the C-terminus, conserved among its members.


Pssm-ID: 437252 [Multi-domain]  Cd Length: 288  Bit Score: 62.01  E-value: 3.51e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517382877   26 ALALLQWEDLRDRYRALGHTVEILQ-PLPGLPDMVFAAN-GATVVDGRVFGARFANPERAAEAPAHREWFLNR------- 96
Cdd:pfam19420  26 ERALKEFDAMVQALRQNGIEVIVLDdTEPKTPDAVFPNNwFSTHADGTVFLYPMYAENRRLERREDLLELLLEkgfavyk 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517382877   97 --GYGEVHDPHHANEGEGDFAV--TESWLLAGKGFRSSPLSHSELQEFFGRPVIGLE---LTDPH---FYHLDTALCVLS 166
Cdd:pfam19420 106 vlDYSGFEDESKFLEGTGDMVFdhENKIAYGALSPRADEEVLEEVCREIGYKPVTFHsevIVDRKgkpIYHTNVMMNVGE 185
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517382877  167 GDEIMYYPDAFSPGSR-AVLRRLFPDA---LTATRQDAAAFGLNC--VSDGLHVLVPSGA-----TGLLRRLRERGYEPV 235
Cdd:pfam19420 186 DLAVVCLESIPDRKEReLVLRALTQSGkeiIDISEEQIFHFAGNVleLCNGNKNLIMSVTaydslTPVQEQLIEKYCEVI 265
                         250       260
                  ....*....|....*....|...
gi 517382877  236 PVDMSEL-HKAGGSVKCCTMELR 257
Cdd:pfam19420 266 SVDIPTIeRLGGGSARCMIAEIF 288
amidinotransferase-like cd21113
L-arginine:glycine amidinotransferase, inosamine-phosphate amidinotransferase and similar ...
54-257 6.99e-11

L-arginine:glycine amidinotransferase, inosamine-phosphate amidinotransferase and similar proteins; This family contains amidinotransferase enzymes known to catalyze the transfer of the amidino group from a donor molecule (usually arginine) to an acceptor molecule bearing a primary amine. They are widespread in nature, occurring in essential metabolic pathways in eukaryotes as well as in biosynthetic pathways for antibiotics and virulence factors in prokaryotes. This family includes L-arginine:glycine amidinotransferase (EC 2.1.4.1; also called glycine amidinotransferase, arginine-glycine amidinotransferase, or arginine-glycine transamidinase), inosamine-phosphate amidinotransferase (EC 2.1.4.2; also called inosamine amidinotransferase, inosamine-P amidinotransferase, or scyllo-inosamine-4-phosphate amidinotransferase or L-arginine:inosamine phosphate amidinotransferase), and similar proteins. L-arginine:glycine amidinotransferase (AT or AGAT) catalyzes the committed step in creatine biosynthesis by formation of guanidinoacetic acid, the immediate precursor of creatine. Inosamine-phosphate amidinotransferases catalyze two nonconsecutive transamidination reactions in the biosynthesis of the streptomycin family of antibiotics. This family also includes L-arginine:inosamine-phosphate Streptomyces griseus amidinotransferase StrB1, which is structurally similar to human L-arginine:glycine amidinotransferase; AT and StrB1 share conserved residues involved in substrate binding and catalysis at equivalent topological positions, suggesting a similar reaction mechanism among amidinotransferases.


Pssm-ID: 439146  Cd Length: 336  Bit Score: 61.37  E-value: 6.99e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517382877  54 GLPDMVFAANGATVVDGRVFGARFANPERAAEAPAHR----EWFLNRGYGEVHDPH--------HANEGEGDFAVTESW- 120
Cdd:cd21113   92 GETTGVMPRDILFVIGNKIIEAPMAWPSRFFEELAYRdileDYGESGLYRVMRAPKpeggddlyDGQAPAGEDIITETEp 171
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517382877 121 -------------LLAGKGFRSSPLSHSELQEFFGR--PVIGLELTDPHFYHLDTALCVLSGDEIMYYPDAFSPGSRA-V 184
Cdd:cd21113  172 lfdaadfmrfgkdIIGQRSQVTNMKGIEWLREYLGDdyTVHIIELDDPHPMHLDCTFLPLREGLALIYPSRVVEPRQIpD 251
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517382877 185 LRRLFpDALTATRQDAAAF----------GLNCVS-DGLHVLVPSGATGLLRRLRERGYEPVPVDMSELHKAGGSVKCCT 253
Cdd:cd21113  252 FFKGW-ELINVPEYPEPDDhplymcsnwlGTNVLSlDEKTIIVERREVHLNRQLRKLGMNVIEIPFYHAISLGGGFHCAT 330

                 ....
gi 517382877 254 MELR 257
Cdd:cd21113  331 MDLV 334
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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