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Conserved domains on  [gi|517511825|ref|WP_018682033|]
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MULTISPECIES: DUF2469 domain-containing protein [Actinokineospora]

Protein Classification

DUF2469 domain-containing protein( domain architecture ID 10566261)

DUF2469 domain-containing protein similar to Mycobacterium tuberculosis protein Rv2901c

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2469 pfam10611
Protein of unknown function (DUF2469); Member proteins often found in Actinomycetes clustered ...
 1-100 3.70e-65

Protein of unknown function (DUF2469); Member proteins often found in Actinomycetes clustered with signal peptidase and/or RNAse-HII.


:

Pssm-ID: 431393  Cd Length: 100  Bit Score: 191.77  E-value: 3.70e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517511825    1 MSAEDLEKYETEMELQLYREYRDIVGQFAYVVETERRFYLANGVDVQVRDADGEVYFEVRMSDAWVWDMYRPARFVKNVR 80
Cdd:pfam10611   1 MSAEDLENYETEMELQLYREYRDVVGLFSYVVETERRFYLANQVDLQVRSAGGEVYFEVTMADAWVWDMYRPARFVKNVR 80

                          90       100
                  ....*....|....*....|
gi 517511825   81 VITFKDVNVEELDKPDLRLP 100
Cdd:pfam10611  81 VVTFKDVNVEELPKPELELP 100
 
Name Accession Description Interval E-value
DUF2469 pfam10611
Protein of unknown function (DUF2469); Member proteins often found in Actinomycetes clustered ...
 1-100 3.70e-65

Protein of unknown function (DUF2469); Member proteins often found in Actinomycetes clustered with signal peptidase and/or RNAse-HII.


Pssm-ID: 431393  Cd Length: 100  Bit Score: 191.77  E-value: 3.70e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517511825    1 MSAEDLEKYETEMELQLYREYRDIVGQFAYVVETERRFYLANGVDVQVRDADGEVYFEVRMSDAWVWDMYRPARFVKNVR 80
Cdd:pfam10611   1 MSAEDLENYETEMELQLYREYRDVVGLFSYVVETERRFYLANQVDLQVRSAGGEVYFEVTMADAWVWDMYRPARFVKNVR 80

                          90       100
                  ....*....|....*....|
gi 517511825   81 VITFKDVNVEELDKPDLRLP 100
Cdd:pfam10611  81 VVTFKDVNVEELPKPELELP 100
 
Name Accession Description Interval E-value
DUF2469 pfam10611
Protein of unknown function (DUF2469); Member proteins often found in Actinomycetes clustered ...
 1-100 3.70e-65

Protein of unknown function (DUF2469); Member proteins often found in Actinomycetes clustered with signal peptidase and/or RNAse-HII.


Pssm-ID: 431393  Cd Length: 100  Bit Score: 191.77  E-value: 3.70e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517511825    1 MSAEDLEKYETEMELQLYREYRDIVGQFAYVVETERRFYLANGVDVQVRDADGEVYFEVRMSDAWVWDMYRPARFVKNVR 80
Cdd:pfam10611   1 MSAEDLENYETEMELQLYREYRDVVGLFSYVVETERRFYLANQVDLQVRSAGGEVYFEVTMADAWVWDMYRPARFVKNVR 80

                          90       100
                  ....*....|....*....|
gi 517511825   81 VITFKDVNVEELDKPDLRLP 100
Cdd:pfam10611  81 VVTFKDVNVEELPKPELELP 100
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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